Citrus Sinensis ID: 009980

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-
Protein Sequence
MGQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAKEEEMDAEIVSRLQSFNARRKLRAAAIASVLSSTIFLRRTKKLKNLLGSHDLNEEEIQNLRIHFRTICANGDNATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDSSLQDVVLSSLRQQ
Secondary Structure (PSIPRED)
cccccccccccEEEccccccccccEEEEEEEcccccccEEEEEEEEccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccEEEEEEEEEEcccEEEEEEcccccHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccEEEEccccEEEccccccccccccccccccccccccccccHHHHHHHHHHHHHHHccccccccccHHHHHHHHHcccccccccccccccHHHHHHHHHHccccccccccHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHccccccccHHHHHHHHHHccccccHHHHHHHHHHHcccccccEEHHHHHHHHcccHHHccHHHHHHHHHHHcccccccccHHHHHHHHHcccccccccccccHHHHHHHHHHHcccccccccHHHHHHHHHcccccHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccccccHHccEEEEEEEEEcccEEEEEEEEcccccHHHEHHHHHHHHccccHccccccccccccccccccccHHHHHccHHHHHHHHHHHHHHHHHHcccccEccEEEEEEcccEEEEEEEcccccEHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccEEcccccHHHEEEccccccccEEEccccccEEcccccEEEEEEccHHHccHHHHcccEEcHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHccccccHHHHccccHHHHHHHHccccccHHHcccHHHHHHcHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcHEHHHHHHHHHHHHccccccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHcccccHHHHHHHHHHHcccccccEcHHHHHHHHHHHHHHccHHHHHHHHHHHcccccccEcHHHHHHHHHHHcccccccccccHHHHHHHHHHHcccccccEcHHHHHHHHHccccHHHcHccHcccc
Coil and Loop (DISEMBL)
mgqetrkltdeyevTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRrigsttpygfpgsrgsssssqigffptrkqvsvsdaLLTNEILVMRKIVenvsphpnvidlydvyedqnGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANivhrdlkpenclflndredsplkimdfglssvegytdpvvglfgsidyvspeallqdritsksdmwSLGVILYILLsgyppfiaqsNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLtvdpnrrpsaqellnhpwvigdsakeeEMDAEIVSRLQSFNARRKLRAAAIASVLSSTIFLRRTKKLKNLlgshdlneEEIQNLRIHFRTIcangdnatLSEFEEVLKAMNmsslvplaprifdlfdnnrdgtvDMREILCGFSSLRKSQGDDALRLCFQMydidrsgciTKEEVASMLRalpddclpvditepgkldEIFDLmdanndgkvtFDEFRAAMQRDSSLQDVVLSSLRQQ
Flexible Loop (DISEMBL)
mgqetrkltdeyevtdilgrggfsvvrrgikktcgetnqvaiktlrrigsttpygfpgsrgssssSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAKEEEMDAEIVSRLQSFNARRKLRAAAIasvlsstiflrrTKKLKNLLGSHDLNEEEIQNLRIHFRTICANGDNATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAmqrdsslqdvvlsslrqq
Low Complexity Region (SEG)
MGQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPgsrgsssssQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAKEEEMDAEIVSRLQSFNARRKLRAAAIASVLSSTIFLRRTKKLKNLLGSHDLNEEEIQNLRIHFRTICANGDNATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQrdsslqdvvlsslrqq
Disordered region (IsUnstruct)
********************************************************************GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLT***********LLNHPWVIG***********IVSRLQSFNARRKLRAAAIASVLSSTIFLRRTKKLKNLLGSHDLNEEEIQNLRIHFRTICANGDNATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDE**********************
Disordered Region (DISOPRED)
*****RK**DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAKEEEMDAEIVSRLQSFNARRKLRAAAIASVLSSTIFLRRTK******************LRIHFRTICANGDNATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAA******************
Disordered Region (DISEMBL)
********TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYG*************GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAKEEEMDAEIVSRLQSFNARRKLRAAAIASVLSSTIFLRRTKKLKNLLGSHDLNEEEIQNLRIHFRTICANGDNATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDSSLQDVVLSSLRQQ
Disordered Region (DISPRO)
****TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTT*Y*F*************F*PTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAKEEEMDAEIVSRLQSFNARRKLRAAAIASVLSSTIFLRRTKKLKNLLGSHDLNEEEIQNLRIHFRTICANGDNATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR***************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAKEEEMDAEIVSRLQSFNARRKLRAAAIASVLSSTIFLRRTKKLKNLLGSHDLNEEEIQNLRIHFRTICANGDNATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDSSLQDVVLSSLRQQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	521	2.2.26 [Sep-21-2011]
Q6RET7	523	Calcium and calcium/calmo	N/A	no	0.992	0.988	0.799	0.0
A0AAR7	518	Calcium and calcium/calmo	N/A	no	0.982	0.988	0.796	0.0
Q6RET6	527	Calcium and calcium/calmo	N/A	no	0.980	0.969	0.763	0.0
Q43531	520	Calcium and calcium/calmo	N/A	no	0.982	0.984	0.763	0.0
Q6AVM3	516	Calcium and calcium/calmo	yes	no	0.982	0.992	0.718	0.0
Q07250	415	Calcium/calmodulin-depend	N/A	no	0.773	0.971	0.726	1e-169
Q38870	646	Calcium-dependent protein	yes	no	0.742	0.599	0.366	1e-67
Q9ZSA2	531	Calcium-dependent protein	no	no	0.744	0.730	0.351	2e-66
Q9FMP5	528	Calcium-dependent protein	no	no	0.861	0.850	0.311	2e-66
Q9M101	520	Calcium-dependent protein	no	no	0.737	0.738	0.362	3e-66

>sp|Q6RET7|CCAMK_MEDTR Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase DMI-3 OS=Medicago truncatula GN=DMI3 PE=2 SV=1

 Score =  851 bits (2198), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 419/524 (79%), Positives = 462/524 (88%), Gaps = 7/524 (1%)

Query: 1   MGQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGE----TNQVAIKTLRRIG-STTPYG 55
           MG  TRKL+DEYEV++ILGRGGFSVVR+G KK+  E     +QVAIKTLRR+G S  P G
Sbjct: 1   MGYGTRKLSDEYEVSEILGRGGFSVVRKGTKKSSIEEEKSQSQVAIKTLRRLGASNNPSG 60

Query: 56  FPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQN 115
            P  +     S IGF PT +QVSVSD LLTNEILVMR+IVENVSPHPNVIDLYDVYED N
Sbjct: 61  LPRKKDIGEKSTIGF-PTMRQVSVSDTLLTNEILVMRRIVENVSPHPNVIDLYDVYEDTN 119

Query: 116 GVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLF 175
           GVHL+LELCSGGELFDRIVAQ++Y E  AA V+ QIA GL A+H+ANIVHRDLKPENCLF
Sbjct: 120 GVHLVLELCSGGELFDRIVAQDKYSETEAATVVHQIASGLEAVHRANIVHRDLKPENCLF 179

Query: 176 LNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY 235
           L+ R+DSPLKIMDFGLSSVE +TDPVVGLFGSIDYVSPEAL Q +IT+KSDMWSLGVILY
Sbjct: 180 LDVRKDSPLKIMDFGLSSVEEFTDPVVGLFGSIDYVSPEALSQGKITTKSDMWSLGVILY 239

Query: 236 ILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQE 295
           ILLSGYPPFIAQ+NRQKQQMIM G FSFYE+TWK IS  AK LISSLLTVDP++RPSA E
Sbjct: 240 ILLSGYPPFIAQNNRQKQQMIMNGNFSFYEKTWKGISQPAKNLISSLLTVDPSKRPSALE 299

Query: 296 LLNHPWVIGDSAKEEEMDAEIVSRLQSFNARRKLRAAAIASVLSSTIFLRRTKKLKNLLG 355
           LL+ PWV G+ AK+ +MD EIVSRLQSFNARRKLRAAAIASV SSTIFL RTKKLK+L+G
Sbjct: 300 LLSDPWVKGEKAKDVQMDPEIVSRLQSFNARRKLRAAAIASVWSSTIFL-RTKKLKSLVG 358

Query: 356 SHDLNEEEIQNLRIHFRTICANGDNATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDG 415
           S+DL EEEI+NLR+HF+ ICA+ DNATLSEFEEVLKAMNM SL+P A RIFDLFDNNRDG
Sbjct: 359 SYDLKEEEIENLRMHFKKICADRDNATLSEFEEVLKAMNMLSLIPFASRIFDLFDNNRDG 418

Query: 416 TVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDIT 475
           TVDMREILCGFSSL+ S+G+DALRLCFQMYD DRSGCI+KEEVASMLRALP DCLP DIT
Sbjct: 419 TVDMREILCGFSSLKNSKGEDALRLCFQMYDTDRSGCISKEEVASMLRALPYDCLPTDIT 478

Query: 476 EPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDSSLQDVVLSSLR 519
           EPGKLDEIFDLMDANNDGKVTFDEF+AAMQRDSSLQDVVLSS+R
Sbjct: 479 EPGKLDEIFDLMDANNDGKVTFDEFKAAMQRDSSLQDVVLSSIR 522

Protein kinase that recognizes the calcium spiking induced by Nod factors and translates this signal to components controlling nodulation and mycorrhizal infection responses. May phosphorylate the NSP1 protein.
Medicago truncatula (taxid: 3880)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1EC: 7

>sp|A0AAR7|CCAMK_LOTJA Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase OS=Lotus japonicus GN=CCAMK PE=1 SV=1

 Score =  847 bits (2188), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 411/516 (79%), Positives = 467/516 (90%), Gaps = 4/516 (0%)

Query: 4   ETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSS 63
           +TRKL+DEYE+++ILGRGGFSVVR+G KK+  E  QVAIKTLRR+GS+      G +   
Sbjct: 5   QTRKLSDEYEISEILGRGGFSVVRKGTKKSGNEKTQVAIKTLRRLGSSPSGTGGGQK--- 61

Query: 64  SSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILEL 123
           S++ +  FP+ +QVSVSDALLTNEILVMR+IVENVSPHPNVIDLYDV ED NGVHL+LEL
Sbjct: 62  STATVMGFPSLRQVSVSDALLTNEILVMRRIVENVSPHPNVIDLYDVCEDSNGVHLVLEL 121

Query: 124 CSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSP 183
           CSGGELFDRIVAQ++Y E  AAAV+RQIA GL A+H+A+IVHRDLKPENCLFL+ R+DSP
Sbjct: 122 CSGGELFDRIVAQDKYAETEAAAVVRQIAAGLEAVHKADIVHRDLKPENCLFLDSRKDSP 181

Query: 184 LKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPP 243
           LKIMDFGLSSVE +TDPVVGLFGSIDYVSPEAL Q +IT+KSDMWSLGVILYILLSGYPP
Sbjct: 182 LKIMDFGLSSVEEFTDPVVGLFGSIDYVSPEALSQGKITAKSDMWSLGVILYILLSGYPP 241

Query: 244 FIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVI 303
           FIAQ+NRQKQQMI+ G FSFYE+TWK I+ SAKQLISSLLTVDP++RPSAQELL+HPWV 
Sbjct: 242 FIAQNNRQKQQMIINGNFSFYEKTWKGITQSAKQLISSLLTVDPSKRPSAQELLSHPWVR 301

Query: 304 GDSAKEEEMDAEIVSRLQSFNARRKLRAAAIASVLSSTIFLRRTKKLKNLLGSHDLNEEE 363
           GD AK+E+MD EIVSRLQSFNARRKLRAAAIASV SSTIFL RTKKL++L+G++DL EEE
Sbjct: 302 GDKAKDEQMDPEIVSRLQSFNARRKLRAAAIASVWSSTIFL-RTKKLRSLVGTYDLKEEE 360

Query: 364 IQNLRIHFRTICANGDNATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREIL 423
           I++LRIHF+ IC NGDNATLSEF EVLKAM M SL+PLAPRIFDLFDNNRDGT+DMREIL
Sbjct: 361 IESLRIHFKKICGNGDNATLSEFVEVLKAMKMPSLIPLAPRIFDLFDNNRDGTIDMREIL 420

Query: 424 CGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEI 483
           CGFSSL+ S+GDDALRLCFQMYD DRSGCITKEEVASML ALP++CLP DITEPGKLDEI
Sbjct: 421 CGFSSLKNSKGDDALRLCFQMYDTDRSGCITKEEVASMLCALPEECLPADITEPGKLDEI 480

Query: 484 FDLMDANNDGKVTFDEFRAAMQRDSSLQDVVLSSLR 519
           FDLMDAN+DGKVTF+EF+AAMQRDSSLQD++LSSLR
Sbjct: 481 FDLMDANSDGKVTFEEFKAAMQRDSSLQDMLLSSLR 516

Calcium- and calmodulin-dependent protein kinase necessary and sufficient for dedifferentiation of root cortical cells into nodule initials. Not required for calcium spiking.

Lotus japonicus (taxid: 34305)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 7

>sp|Q6RET6|CCAMK_PEA Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase (Fragment) OS=Pisum sativum GN=SYM9 PE=1 SV=2

 Score =  815 bits (2105), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 400/524 (76%), Positives = 452/524 (86%), Gaps = 13/524 (2%)

Query: 5   TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGE------------TNQVAIKTLRRIGSTT 52
           TRKL+D YEV++ILGRGGFSVVR+G +K+  +             +QVAIKTLRR+G++ 
Sbjct: 5   TRKLSDVYEVSEILGRGGFSVVRKGTRKSNNDDEKSQSQSKSQSQSQVAIKTLRRLGTSN 64

Query: 53  PYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYE 112
                   G +S+  +  FPT +QVSVSDALLTNEILVMR+IVENVSPHPNVIDLYDVYE
Sbjct: 65  NLPRKKDGGENSTETMMKFPTMRQVSVSDALLTNEILVMRRIVENVSPHPNVIDLYDVYE 124

Query: 113 DQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPEN 172
           D NGVHL+LELCSGGELFDRIVAQ++Y E  A+ V+ QI  GL A+H+ANI+HRDLKPEN
Sbjct: 125 DTNGVHLVLELCSGGELFDRIVAQDKYSETEASTVVHQIVAGLEAIHRANIIHRDLKPEN 184

Query: 173 CLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGV 232
           CLFL+  +DS LKIMDFGLSSVE +TDPVVGLFGSIDYVSPEAL Q +IT+KSDMWSLGV
Sbjct: 185 CLFLDVGKDSSLKIMDFGLSSVEEFTDPVVGLFGSIDYVSPEALSQGKITTKSDMWSLGV 244

Query: 233 ILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPS 292
           ILYILLSGYPPFIAQ+NRQKQQMI+ G FSFYE+TWK IS SAK LISSLLTVDP +RPS
Sbjct: 245 ILYILLSGYPPFIAQNNRQKQQMILNGNFSFYEKTWKGISQSAKNLISSLLTVDPAKRPS 304

Query: 293 AQELLNHPWVIGDSAKEEEMDAEIVSRLQSFNARRKLRAAAIASVLSSTIFLRRTKKLKN 352
           AQELL+ PWV G+ AK+++MD EIVSRLQ FNARRKLRAAAIASV SSTIFL RTKKLK+
Sbjct: 305 AQELLSDPWVKGEKAKDDQMDPEIVSRLQRFNARRKLRAAAIASVWSSTIFL-RTKKLKS 363

Query: 353 LLGSHDLNEEEIQNLRIHFRTICANGDNATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNN 412
           L+GS+DL E+EI+NLR+HF+ ICA+ DNATL EFEEVLKAM M SL+P A RIFDLFDNN
Sbjct: 364 LVGSYDLKEDEIENLRMHFKKICADRDNATLCEFEEVLKAMKMPSLIPFAARIFDLFDNN 423

Query: 413 RDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPV 472
           RDGTVDMREILCGFSSL+ S+G+DALRLCFQMYD DRSGCITKEEVASMLRALP DCLP 
Sbjct: 424 RDGTVDMREILCGFSSLKNSKGEDALRLCFQMYDTDRSGCITKEEVASMLRALPYDCLPT 483

Query: 473 DITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDSSLQDVVLS 516
           DITEPGKLDEIFDLMDAN+DGKVTFDEF+AAMQRDSSLQDVVLS
Sbjct: 484 DITEPGKLDEIFDLMDANSDGKVTFDEFKAAMQRDSSLQDVVLS 527

Protein kinase that recognizes the calcium spiking induced by Nod factors and translates this signal to components controlling nodulation and mycorrhizal infection responses.

Pisum sativum (taxid: 3888)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 7

>sp|Q43531|CCAMK_LILLO Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase OS=Lilium longiflorum GN=CCAMK PE=1 SV=1

 Score =  815 bits (2104), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 397/520 (76%), Positives = 451/520 (86%), Gaps = 8/520 (1%)

Query: 3   QETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTP---YGFPGS 59
            E+RKL+D+YEV D+LG+GGFSVVRRGI K+ G+ N VAIKTLRR G T P      PG 
Sbjct: 4   HESRKLSDDYEVVDVLGKGGFSVVRRGISKSRGKNNDVAIKTLRRYGYTLPGAQRSQPGQ 63

Query: 60  RGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHL 119
           RG S    +G  PT KQVSVSDALLTNEILVMR+IVE+VSPHPNVI L+DVYED NGVHL
Sbjct: 64  RGLSP---LGM-PTLKQVSVSDALLTNEILVMRRIVEDVSPHPNVIHLHDVYEDANGVHL 119

Query: 120 ILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDR 179
           +LELCSGGELFDRIVAQ+RY E  AA V++QIA GLAALH++ I+HRDLKPENCLFLN  
Sbjct: 120 VLELCSGGELFDRIVAQDRYSESEAAEVVQQIASGLAALHKSTIIHRDLKPENCLFLNQE 179

Query: 180 EDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS 239
           + S LKIMDFGLSSVE +TDP+V LFGSIDYVSPEAL Q +++S SDMWSLGVILYILLS
Sbjct: 180 KRSTLKIMDFGLSSVEDFTDPIVALFGSIDYVSPEALSQRQVSSASDMWSLGVILYILLS 239

Query: 240 GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH 299
           G PPF A SNR+KQQ I+AG+FSF E TWK I+SSAK LISSLL+VDP +RP+A +LL H
Sbjct: 240 GCPPFHAPSNREKQQRILAGDFSFEEHTWKTITSSAKDLISSLLSVDPYKRPTANDLLKH 299

Query: 300 PWVIGDSAKEEEMDAEIVSRLQSFNARRKLRAAAIASVLSSTIFLRRTKKLKNLLGSHDL 359
           PWVIGDSAK+E ++ E+VSRL+SFNARRKLRAAAIASVLSS + L RTKKLKNLLGSHD+
Sbjct: 300 PWVIGDSAKQELIEPEVVSRLRSFNARRKLRAAAIASVLSSKVLL-RTKKLKNLLGSHDM 358

Query: 360 NEEEIQNLRIHFRTICANGDNATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDM 419
             EE++NLR HF+ ICANGDNATL EFEEVLKAM M+SL+PLAPR+FDLFDNNRDGT+DM
Sbjct: 359 KSEELENLRAHFKRICANGDNATLPEFEEVLKAMKMNSLIPLAPRVFDLFDNNRDGTIDM 418

Query: 420 REILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGK 479
           REILCG S+LR SQGDDAL+LCFQMYD DRSGCI+KEE+ASMLRALP+DC+P DITEPGK
Sbjct: 419 REILCGLSNLRNSQGDDALQLCFQMYDADRSGCISKEELASMLRALPEDCVPADITEPGK 478

Query: 480 LDEIFDLMDANNDGKVTFDEFRAAMQRDSSLQDVVLSSLR 519
           LDEIFD MDAN+DG VTFDEF+AAMQRDSSLQDVVLSSLR
Sbjct: 479 LDEIFDQMDANSDGVVTFDEFKAAMQRDSSLQDVVLSSLR 518

Protein kinase that may be involved in microsporogenesis.

Lilium longiflorum (taxid: 4690)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 7

>sp|Q6AVM3|CCAMK_ORYSJ Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase OS=Oryza sativa subsp. japonica GN=CCAMK PE=2 SV=1

 Score =  771 bits (1990), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/518 (71%), Positives = 439/518 (84%), Gaps = 6/518 (1%)

Query: 4   ETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSS 63
           E+RKL+D+YEV D+LGRGGFS+VRRG+ K+  E  QVAIKTLRR+G        G++   
Sbjct: 5   ESRKLSDDYEVVDVLGRGGFSIVRRGVSKS-EEKTQVAIKTLRRLGPAMAGMKQGTKPVP 63

Query: 64  SSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILEL 123
            S      P  KQVS+SDALLTNEILVMR+IVE+V+PHPNVI+L+DVYED +GVHL+LEL
Sbjct: 64  GSG----LPMWKQVSISDALLTNEILVMRRIVESVAPHPNVINLHDVYEDVHGVHLVLEL 119

Query: 124 CSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSP 183
           CSGGELFDRIV ++RY E  AA VIRQIA GL ALH+A+IVHRDLKPENCLF +  E S 
Sbjct: 120 CSGGELFDRIVGRDRYSEFDAACVIRQIASGLEALHKASIVHRDLKPENCLFSDKDEKST 179

Query: 184 LKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPP 243
           LKIMDFGLSSVE ++DP+V LFGSIDYVSPEAL +  +++ SDMWS+GVILYILLSG PP
Sbjct: 180 LKIMDFGLSSVEDFSDPIVALFGSIDYVSPEALSRQEVSAASDMWSVGVILYILLSGCPP 239

Query: 244 FIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVI 303
           F A +NR+KQQ I+ GEFSF + TWK ISSSAK LIS LL+V P +RP+A +LL HPWVI
Sbjct: 240 FHAATNREKQQRILQGEFSFQDHTWKTISSSAKDLISRLLSVQPYKRPTASDLLRHPWVI 299

Query: 304 GDSAKEEEMDAEIVSRLQSFNARRKLRAAAIASVLSSTIFLRRTKKLKNLLGSHDLNEEE 363
           GD AK++ MDAE+VS+LQ FNARRKLRAAAIASVLS  + L RTK+L+NLLG+HDL  EE
Sbjct: 300 GDCAKQDLMDAEVVSKLQKFNARRKLRAAAIASVLSCKVAL-RTKRLRNLLGTHDLTSEE 358

Query: 364 IQNLRIHFRTICANGDNATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREIL 423
           + NLR+HF  ICA+G+NATLSEFE+VL+AM M SL+PLAPR+FDLFDNNRDGTVDMREIL
Sbjct: 359 LDNLRLHFGRICADGENATLSEFEQVLRAMKMDSLIPLAPRVFDLFDNNRDGTVDMREIL 418

Query: 424 CGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEI 483
           CGFSSLR S+GDDALRLCFQMYD DRSGCI+KEE+ASMLRALP++CLP DITEPGKLDE+
Sbjct: 419 CGFSSLRNSRGDDALRLCFQMYDADRSGCISKEELASMLRALPEECLPGDITEPGKLDEV 478

Query: 484 FDLMDANNDGKVTFDEFRAAMQRDSSLQDVVLSSLRQQ 521
           FD MDA++DGKVTFDEF+AAM +DS+LQDV+LSSLR Q
Sbjct: 479 FDQMDADSDGKVTFDEFKAAMNKDSALQDVLLSSLRPQ 516

Calcium- and calmodulin-dependent protein kinase required for mycorrhizal symbiosis.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 7

>sp|Q07250|KCCS_MALDO Calcium/calmodulin-dependent serine/threonine-protein kinase OS=Malus domestica PE=2 SV=1

 Score =  595 bits (1533), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 298/410 (72%), Positives = 341/410 (83%), Gaps = 7/410 (1%)

Query: 1   MGQETRKLTDEYEVTDILGRGGFSVVRRGIKK---TCGETNQVAIKTLRR---IGSTTPY 54
           M QETR+L DEYE+++ILGRGGFSVVR+GI +   +  +   VAIKTL+R     +  P 
Sbjct: 1   MIQETRRLADEYEISEILGRGGFSVVRKGISRKSSSSSDKTDVAIKTLKRPFAPSNPPPL 60

Query: 55  GFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQ 114
                R   +S     F TRKQVS+S+ LLTNEILVMRKIVENVSPHPNVIDLYDVYED+
Sbjct: 61  PPHARRNDQNSFAAAAFQTRKQVSISNVLLTNEILVMRKIVENVSPHPNVIDLYDVYEDE 120

Query: 115 NGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCL 174
           NGVHL+LELCSGGELFDRIV QERY EVGAAAV+RQIA+GLAALH++NIVHRDLKPENCL
Sbjct: 121 NGVHLVLELCSGGELFDRIVKQERYSEVGAAAVVRQIAQGLAALHRSNIVHRDLKPENCL 180

Query: 175 FLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVIL 234
           FL++  DSPLKIMDFGLSSVE +TDPVVGLFGSIDYVSPEAL Q ++TSKSDMW+LGVIL
Sbjct: 181 FLDNTVDSPLKIMDFGLSSVEEFTDPVVGLFGSIDYVSPEALSQGQVTSKSDMWALGVIL 240

Query: 235 YILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQ 294
           YILLSGYPPFIAQSNRQKQQMIMAGEFSFYE+TWK      KQLISSLL VDP++RPSAQ
Sbjct: 241 YILLSGYPPFIAQSNRQKQQMIMAGEFSFYEKTWKGFLCQPKQLISSLLKVDPDKRPSAQ 300

Query: 295 ELLNHPWVIGDSAKEEEMDAEIVSRLQSFNARRKLRAAAIASVLSSTIFLRRTKKLKNLL 354
           ELL+HPWV+G SA+E++MDAEIVSRLQSFNARRKLRAAAIASV +S+IFL RTKKLK+LL
Sbjct: 301 ELLDHPWVVGLSAREDQMDAEIVSRLQSFNARRKLRAAAIASVWTSSIFL-RTKKLKSLL 359

Query: 355 GSHDLNEEEIQNLRIHFRTICANGDNATLSEFEEVLKAMNMSSLVPLAPR 404
           GS+DL  +EI+NL  HF+ IC  GDNATLSEF    K +    LV ++ R
Sbjct: 360 GSYDLKPDEIKNLSSHFKKICVKGDNATLSEFRLSCKRLIQLRLVSMSLR 409

May be involved in signal transduction processes.

Malus domestica (taxid: 3750)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 7

>sp|Q38870|CDPK2_ARATH Calcium-dependent protein kinase 2 OS=Arabidopsis thaliana GN=CPK2 PE=1 SV=1

 Score =  258 bits (658), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 154/420 (36%), Positives = 230/420 (54%), Gaps = 33/420 (7%)

Query: 93  KIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIA 152
           +I+ +++ HPNVI +   YED   VHL++ELCSGGELFDRI+ +  Y E  AA + R I 
Sbjct: 236 QIMHHLAGHPNVISIKGAYEDVVAVHLVMELCSGGELFDRIIQRGHYTERKAAELARTIV 295

Query: 153 EGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVS 212
             L A H   ++HRDLKPEN LF++  EDS LK +DFGLS      +    + GS  YV+
Sbjct: 296 GVLEACHSLGVMHRDLKPENFLFVSREEDSLLKTIDFGLSMFFKPDEVFTDVVGSPYYVA 355

Query: 213 PEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNIS 272
           PE +L+ R   +SD+WS GVI+YILLSG PPF A++ +   + ++ G+  F    W +IS
Sbjct: 356 PE-VLRKRYGPESDVWSAGVIVYILLSGVPPFWAETEQGIFEQVLHGDLDFSSDPWPSIS 414

Query: 273 SSAKQLISSLLTVDPNRRPSAQELLNHPWV-IGDSAKEEEMDAEIVSRLQSFNARRKLRA 331
            SAK L+  +L  DP RR +A ++L HPWV I   A ++ +D+ ++SR++ F+A  K + 
Sbjct: 415 ESAKDLVRKMLVRDPKRRLTAHQVLCHPWVQIDGVAPDKPLDSAVLSRMKQFSAMNKFKK 474

Query: 332 AAIASVLSSTIFLRRTKKLKNLLGSHDLNEEEIQNLRIHFRTICANGDNATLSEFEEVLK 391
            A+  +  S                  L+EEEI  L+  F+ I  + DN+    FEE+  
Sbjct: 475 MALRVIAES------------------LSEEEIAGLKQMFKMI--DADNSGQITFEELKA 514

Query: 392 AMNMSSLVPLAPRIFDLF---DNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDID 448
            +           I DL    D +  GT+D +E +     L K + +D L   F  +D D
Sbjct: 515 GLKRVGANLKESEILDLMQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFSYFDKD 574

Query: 449 RSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDS 508
            SG IT +E       L   C    + E  +++E+   +D + DG++ ++EF A MQ+ S
Sbjct: 575 ESGFITPDE-------LQQACEEFGV-EDARIEEMMRDVDQDKDGRIDYNEFVAMMQKGS 626

May play a role in signal transduction pathways that involve calcium as a second messenger.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9ZSA2|CDPKL_ARATH Calcium-dependent protein kinase 21 OS=Arabidopsis thaliana GN=CPK21 PE=1 SV=1

 Score =  254 bits (648), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 149/424 (35%), Positives = 229/424 (54%), Gaps = 36/424 (8%)

Query: 93  KIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIA 152
           +I++ +S  PN++++   YED+  +HL++ELC+GGELFDRI+AQ  Y E  AA +IR I 
Sbjct: 130 QIMQYLSGQPNIVEIKGAYEDRQSIHLVMELCAGGELFDRIIAQGHYSERAAAGIIRSIV 189

Query: 153 EGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV--EG--YTDPVVGLFGSI 208
             +   H   +VHRDLKPEN L  +  E++ LK  DFGLS    EG  Y D    + GS 
Sbjct: 190 NVVQICHFMGVVHRDLKPENFLLSSKEENAMLKATDFGLSVFIEEGKVYRD----IVGSA 245

Query: 209 DYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTW 268
            YV+PE +L+     + D+WS GVILYILLSG PPF A++ +     ++ GE  F  + W
Sbjct: 246 YYVAPE-VLRRSYGKEIDIWSAGVILYILLSGVPPFWAENEKGIFDEVIKGEIDFVSEPW 304

Query: 269 KNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAKEEEMDAEIVSRLQSFNARRK 328
            +IS SAK L+  +LT DP RR +A ++L HPW+ G  A ++ +D+ ++SR++ F A  K
Sbjct: 305 PSISESAKDLVRKMLTKDPKRRITAAQVLEHPWIKGGEAPDKPIDSAVLSRMKQFRAMNK 364

Query: 329 LRAAAIASVLSSTIFLRRTKKLKNLLGSHDLNEEEIQNLRIHFRTICANGDNA-TLSEFE 387
           L+  A+  +  S                  L+EEEI+ L+  F  I  +     T  E +
Sbjct: 365 LKKLALKVIAES------------------LSEEEIKGLKTMFANIDTDKSGTITYEELK 406

Query: 388 EVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDI 447
             L  +          ++ +  D + +GT+D  E +       K   D+ +   FQ +D 
Sbjct: 407 TGLTRLGSRLSETEVKQLMEAADVDGNGTIDYYEFISATMHRYKLDRDEHVYKAFQHFDK 466

Query: 448 DRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRD 507
           D SG IT++E+ S ++          + +   + E+   +D +NDG++ F+EF  AM R 
Sbjct: 467 DNSGHITRDELESAMKEY-------GMGDEASIKEVISEVDTDNDGRINFEEF-CAMMRS 518

Query: 508 SSLQ 511
            S Q
Sbjct: 519 GSTQ 522

May play a role in signal transduction pathways that involve calcium as a second messenger. Mediates the phosphorylation and activation of the S-type anion efflux channel SLAC1.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9FMP5|CDPKH_ARATH Calcium-dependent protein kinase 17 OS=Arabidopsis thaliana GN=CPK17 PE=2 SV=1

 Score =  253 bits (646), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 158/508 (31%), Positives = 251/508 (49%), Gaps = 59/508 (11%)

Query: 1   MGQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSR 60
           +G+    +   Y +   LGRG F V     +K  G  +Q A KT+ +             
Sbjct: 62  LGRPMEDVKASYSLGKELGRGQFGVTHLCTQKATG--HQFACKTIAK------------- 106

Query: 61  GSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLI 120
                        RK V+  D     ++    +I+ +++  PN+++L   YED++ VHL+
Sbjct: 107 -------------RKLVNKED---IEDVRREVQIMHHLTGQPNIVELKGAYEDKHSVHLV 150

Query: 121 LELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRE 180
           +ELC+GGELFDRI+A+  Y E  AA+++R I + +   H   ++HRDLKPEN L LN  E
Sbjct: 151 MELCAGGELFDRIIAKGHYSERAAASLLRTIVQIVHTCHSMGVIHRDLKPENFLLLNKDE 210

Query: 181 DSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSG 240
           +SPLK  DFGLS      +    + GS  Y++PE +L+ +   ++D+WS+GV+LYILL G
Sbjct: 211 NSPLKATDFGLSVFYKPGEVFKDIVGSAYYIAPE-VLKRKYGPEADIWSIGVMLYILLCG 269

Query: 241 YPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHP 300
            PPF A+S       I+ G   F    W +IS  AK L+  +L  DP +R +A ++LNHP
Sbjct: 270 VPPFWAESENGIFNAILRGHVDFSSDPWPSISPQAKDLVKKMLNSDPKQRLTAAQVLNHP 329

Query: 301 WVIGDS-AKEEEMDAEIVSRLQSFNARRKLRAAAIASVLSSTIFLRRTKKLKNLLGSHDL 359
           W+  D  A +  +D  ++SRL+ F A    +  A+  +                     L
Sbjct: 330 WIKEDGEAPDVPLDNAVMSRLKQFKAMNNFKKVALRVIAGC------------------L 371

Query: 360 NEEEIQNLRIHFRTICANGDNA-TLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVD 418
           +EEEI  L+  F+ +  +     TL E  + L             ++ +  D + +GT+D
Sbjct: 372 SEEEIMGLKEMFKGMDTDSSGTITLEELRQGLAKQGTRLSEYEVQQLMEAADADGNGTID 431

Query: 419 MREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPG 478
             E +     + +   ++ L   FQ +D D SG IT EE+   LR          + +  
Sbjct: 432 YGEFIAATMHINRLDREEHLYSAFQHFDKDNSGYITMEELEQALREF-------GMNDGR 484

Query: 479 KLDEIFDLMDANNDGKVTFDEFRAAMQR 506
            + EI   +D +NDG++ +DEF A M++
Sbjct: 485 DIKEIISEVDGDNDGRINYDEFVAMMRK 512

May play a role in signal transduction pathways that involve calcium as a second messenger.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9M101|CDPKN_ARATH Calcium-dependent protein kinase 23 OS=Arabidopsis thaliana GN=CPK23 PE=1 SV=1

 Score =  253 bits (646), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 151/417 (36%), Positives = 226/417 (54%), Gaps = 33/417 (7%)

Query: 93  KIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIA 152
           +I++++S  PNV+++   YED++ VHL++ELC+GGELFDRI+AQ  Y E  AA  I+ I 
Sbjct: 119 QIMQHLSGQPNVVEIKGSYEDRHSVHLVMELCAGGELFDRIIAQGHYSERAAAGTIKSIV 178

Query: 153 EGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV--EG--YTDPVVGLFGSI 208
           + +   H   ++HRDLKPEN LF +  E++ LK+ DFGLS+   EG  Y D V    GS 
Sbjct: 179 DVVQICHLNGVIHRDLKPENFLFSSKEENAMLKVTDFGLSAFIEEGKIYKDVV----GSP 234

Query: 209 DYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTW 268
            YV+PE L Q     + D+WS GVILYILL G PPF A +       I+  +  F  + W
Sbjct: 235 YYVAPEVLRQS-YGKEIDIWSAGVILYILLCGVPPFWADNEEGVFVEILKCKIDFVREPW 293

Query: 269 KNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAKEEEMDAEIVSRLQSFNARRK 328
            +IS SAK L+  +LT DP RR +A ++L HPW+ G  A E+ +D+ ++SR++ F A  K
Sbjct: 294 PSISDSAKDLVEKMLTEDPKRRITAAQVLEHPWIKGGEAPEKPIDSTVLSRMKQFRAMNK 353

Query: 329 LRAAAIASVLSSTIFLRRTKKLKNLLGSHDLNEEEIQNLRIHFRTICANGDNATLSEFEE 388
           L+  A+  V + ++     K LK L  + D N            TI        LS    
Sbjct: 354 LKKLAL-KVSAVSLSEEEIKGLKTLFANMDTNRS---------GTITYEQLQTGLSRLRS 403

Query: 389 VLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDID 448
            L    +  LV  +       D + +GT+D  E +       K   D+ +   FQ  D D
Sbjct: 404 RLSETEVQQLVEAS-------DVDGNGTIDYYEFISATMHRYKLHHDEHVHKAFQHLDKD 456

Query: 449 RSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQ 505
           ++G IT++E+ S ++          + +   + E+   +D +NDGK+ F+EFRA M+
Sbjct: 457 KNGHITRDELESAMKEY-------GMGDEASIKEVISEVDTDNDGKINFEEFRAMMR 506

May play a role in signal transduction pathways that involve calcium as a second messenger. Could act as a calcium sensor involved in drought- and salt stress-induced calcium signaling cascades. Mediates the phosphorylation and activation of the S-type anion efflux channel SLAC1.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	521
224110060	521	predicted protein [Populus trichocarpa]	0.998	0.998	0.839	0.0
186909461	522	Ca2+ and calmodulin-dependent protein ki	0.994	0.992	0.821	0.0
255542283	508	calcium-dependent protein kinase, putati	0.973	0.998	0.829	0.0
225465367	520	PREDICTED: calcium and calcium/calmoduli	0.994	0.996	0.818	0.0
195542475	516	calcium calmodulin-dependent protein kin	0.982	0.992	0.827	0.0
356554906	637	PREDICTED: calcium and calcium/calmoduli	0.996	0.814	0.799	0.0
356526360	526	PREDICTED: calcium and calcium/calmoduli	0.996	0.986	0.797	0.0
449494104	517	PREDICTED: calcium and calcium/calmoduli	0.992	1.0	0.803	0.0
296085421	497	unnamed protein product [Vitis vinifera]	0.950	0.995	0.795	0.0
260619579	523	Ca2+ and calmodulin-dependent protein ki	0.992	0.988	0.797	0.0

>gi|224110060|ref|XP_002315401.1| predicted protein [Populus trichocarpa] gi|222864441|gb|EEF01572.1| predicted protein [Populus trichocarpa]

 Score =  905 bits (2338), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 438/522 (83%), Positives = 476/522 (91%), Gaps = 2/522 (0%)

Query: 1   MGQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSR 60
           MGQETRKL DEYEV+DILGRGGFSVVRRGI KT G+  QVAIKTL+R+G +TP G P SR
Sbjct: 1   MGQETRKLLDEYEVSDILGRGGFSVVRRGILKTSGDRRQVAIKTLKRLGPSTPSGIPRSR 60

Query: 61  GSSSSSQIGF-FPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHL 119
           G        F FPT +QVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHL
Sbjct: 61  GDGERGIASFKFPTWRQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHL 120

Query: 120 ILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDR 179
           +LELCSGGELFDRIVA++RY E  AAAV+RQIAEGL ALH+ANIVHRDLKPENCLFLN+ 
Sbjct: 121 VLELCSGGELFDRIVARDRYSESEAAAVVRQIAEGLGALHRANIVHRDLKPENCLFLNEN 180

Query: 180 EDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS 239
           +DS LKIMDFGLSSVE +TDPVVGLFGSIDYVSPEAL Q RI+SK+DMWSLGVILYILLS
Sbjct: 181 DDSTLKIMDFGLSSVEEFTDPVVGLFGSIDYVSPEALSQGRISSKTDMWSLGVILYILLS 240

Query: 240 GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH 299
           GYPPFIAQSN+QKQQ+I+AG+F+FYE+TWKNI+SSAKQLI+ LL VDP RRPSAQ++LNH
Sbjct: 241 GYPPFIAQSNKQKQQVILAGDFTFYEKTWKNITSSAKQLITDLLQVDPERRPSAQDVLNH 300

Query: 300 PWVIGDSAKEEEMDAEIVSRLQSFNARRKLRAAAIASVLSSTIFLRRTKKLKNLLGSHDL 359
           PWVIGDSAKEE+MD EIVSRLQSFNARRK RAAAIASV SSTIFL RTKKLK+LLGSHDL
Sbjct: 301 PWVIGDSAKEEQMDPEIVSRLQSFNARRKFRAAAIASVWSSTIFL-RTKKLKSLLGSHDL 359

Query: 360 NEEEIQNLRIHFRTICANGDNATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDM 419
            E+EI+ LR+HF  +CA GDNATLSEFEEVLKAMNMS L+P+APRIFDLFDNNRDGTVDM
Sbjct: 360 KEDEIEKLRLHFSKLCAKGDNATLSEFEEVLKAMNMSLLIPMAPRIFDLFDNNRDGTVDM 419

Query: 420 REILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGK 479
           REILCGFSSLR SQGDDALRLCFQMYD DRSGCITKEEVASMLRALP+DCLP DI EPGK
Sbjct: 420 REILCGFSSLRNSQGDDALRLCFQMYDTDRSGCITKEEVASMLRALPEDCLPADIAEPGK 479

Query: 480 LDEIFDLMDANNDGKVTFDEFRAAMQRDSSLQDVVLSSLRQQ 521
           LDEIFD MDAN+DGKVTFDEF+AAM+RDSSLQDVVLSSLRQQ
Sbjct: 480 LDEIFDRMDANSDGKVTFDEFKAAMKRDSSLQDVVLSSLRQQ 521

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|186909461|gb|ACC94267.1| Ca2+ and calmodulin-dependent protein kinase [Sesbania rostrata]

 Score =  892 bits (2305), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 429/522 (82%), Positives = 476/522 (91%), Gaps = 4/522 (0%)

Query: 1   MGQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTT--PYGFPG 58
           MG ETR+L+DEYEV+D+LGRGGFSVVR+G KK+  E   VAIKTLRR+G++   P G P 
Sbjct: 1   MGYETRRLSDEYEVSDVLGRGGFSVVRKGTKKSSSEKTLVAIKTLRRLGASNNNPSGLPK 60

Query: 59  SRGSSSS-SQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGV 117
           ++G   S + +  FPT +QVSVSDALLTNEILVMR+IVENVSPHPNVIDLYDVYED NGV
Sbjct: 61  TKGGEKSIATMMGFPTWRQVSVSDALLTNEILVMRRIVENVSPHPNVIDLYDVYEDSNGV 120

Query: 118 HLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLN 177
           HL+LELCSGGELFDRIVAQ+RY E  AAAV+RQIA GL A+H+ANIVHRDLKPENCLFL+
Sbjct: 121 HLVLELCSGGELFDRIVAQDRYSETEAAAVVRQIAAGLEAIHKANIVHRDLKPENCLFLD 180

Query: 178 DREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYIL 237
            R+DSPLKIMDFGLSSVE +TDPVVGLFGSIDYVSPEAL Q +IT+KSDMWSLGVILYIL
Sbjct: 181 TRKDSPLKIMDFGLSSVEEFTDPVVGLFGSIDYVSPEALSQGKITTKSDMWSLGVILYIL 240

Query: 238 LSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELL 297
           LSGYPPFIA SNRQKQQMI+ G FSFYE+TWK IS SAKQLISSLLTVDP++RPSAQ+LL
Sbjct: 241 LSGYPPFIAPSNRQKQQMIVNGNFSFYEKTWKGISQSAKQLISSLLTVDPSKRPSAQQLL 300

Query: 298 NHPWVIGDSAKEEEMDAEIVSRLQSFNARRKLRAAAIASVLSSTIFLRRTKKLKNLLGSH 357
           +HPWVIG+ AK+++MD EIVSRLQSFNARRKLRAAAIASV SST+FL RTKKL++L+G+H
Sbjct: 301 SHPWVIGEKAKDDQMDPEIVSRLQSFNARRKLRAAAIASVWSSTVFL-RTKKLRSLVGTH 359

Query: 358 DLNEEEIQNLRIHFRTICANGDNATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTV 417
           DL EEEI+NLRIHF+ ICANGDNATLSEFEEVLKAMNM SL+PLAPRIFDLFDNNRDGTV
Sbjct: 360 DLKEEEIENLRIHFKKICANGDNATLSEFEEVLKAMNMPSLIPLAPRIFDLFDNNRDGTV 419

Query: 418 DMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEP 477
           DMREILCGFSSL+ S+GDDALRLCFQMYD DRSGCITKEEVASMLRALPDDCLP DITEP
Sbjct: 420 DMREILCGFSSLKNSKGDDALRLCFQMYDTDRSGCITKEEVASMLRALPDDCLPADITEP 479

Query: 478 GKLDEIFDLMDANNDGKVTFDEFRAAMQRDSSLQDVVLSSLR 519
           GKLDEIFDLMDAN+DGKVTFDEF+AAMQRDSSLQDVVLSSLR
Sbjct: 480 GKLDEIFDLMDANSDGKVTFDEFKAAMQRDSSLQDVVLSSLR 521

Source: Sesbania rostrata

Species: Sesbania rostrata

Genus: Sesbania

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255542283|ref|XP_002512205.1| calcium-dependent protein kinase, putative [Ricinus communis] gi|223548749|gb|EEF50239.1| calcium-dependent protein kinase, putative [Ricinus communis]

 Score =  890 bits (2299), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 433/522 (82%), Positives = 473/522 (90%), Gaps = 15/522 (2%)

Query: 1   MGQETRKLTDEYEVTDILGRGGFSVVRRGIKK-TCGETNQVAIKTLRRIGSTTPYGFPGS 59
           MGQ+++KL+DEYEV+DILGRGGFSVVRRGI+K T GETN VAIKTLRR+GS+   G PGS
Sbjct: 1   MGQKSKKLSDEYEVSDILGRGGFSVVRRGIRKSTTGETNHVAIKTLRRLGSS---GIPGS 57

Query: 60  RGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHL 119
                      FPT KQVSVSDALLTNEILVMRKIVE VSPHPNVIDLYDVYEDQNGVHL
Sbjct: 58  N----------FPTWKQVSVSDALLTNEILVMRKIVEYVSPHPNVIDLYDVYEDQNGVHL 107

Query: 120 ILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDR 179
           +LELCSGGELFDRIVA++RY E  AAAVIRQIA GL A+HQANI+HRDLKPENCLFLN++
Sbjct: 108 VLELCSGGELFDRIVARDRYSEREAAAVIRQIARGLGAIHQANIIHRDLKPENCLFLNEK 167

Query: 180 EDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS 239
           +DS LKIMDFGLSS E +TDPVVGLFGSIDYVSPEAL Q RI+SKSDMWS+G+ILYILLS
Sbjct: 168 DDSTLKIMDFGLSSAEEFTDPVVGLFGSIDYVSPEALSQGRISSKSDMWSVGIILYILLS 227

Query: 240 GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH 299
           GYPPFIAQSNRQKQQMIMAG+FSFYE+TWKNI+SSAKQLI+ LL VDP RRPSAQ++L+H
Sbjct: 228 GYPPFIAQSNRQKQQMIMAGDFSFYEKTWKNITSSAKQLIADLLQVDPQRRPSAQDVLSH 287

Query: 300 PWVIGDSAKEEEMDAEIVSRLQSFNARRKLRAAAIASVLSSTIFLRRTKKLKNLLGSHDL 359
           PWVIGDSAKEE+MD EIVSRLQSFNARRKLRAAAIASV SSTIFL RTKKLK+LLG+HDL
Sbjct: 288 PWVIGDSAKEEQMDPEIVSRLQSFNARRKLRAAAIASVWSSTIFL-RTKKLKSLLGTHDL 346

Query: 360 NEEEIQNLRIHFRTICANGDNATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDM 419
            E+EI+ LR+HF  +CA GDNA LSEFEEVLKAMNMSSL+PLAPRIFDLFDNNRDGTVDM
Sbjct: 347 KEDEIEKLRVHFTKLCAKGDNAILSEFEEVLKAMNMSSLIPLAPRIFDLFDNNRDGTVDM 406

Query: 420 REILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGK 479
           REILCGFSSLR SQGDDAL LCFQMYD DRSGCITKEEVAS+LRALP+DCLP DI EPGK
Sbjct: 407 REILCGFSSLRNSQGDDALHLCFQMYDTDRSGCITKEEVASLLRALPEDCLPADIAEPGK 466

Query: 480 LDEIFDLMDANNDGKVTFDEFRAAMQRDSSLQDVVLSSLRQQ 521
           LDEIFD MDAN+DGKVTFDEF+AAMQRDSSLQD +LSSLRQQ
Sbjct: 467 LDEIFDRMDANSDGKVTFDEFKAAMQRDSSLQDALLSSLRQQ 508

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225465367|ref|XP_002273342.1| PREDICTED: calcium and calcium/calmodulin-dependent serine/threonine-protein kinase DMI-3 [Vitis vinifera]

 Score =  884 bits (2283), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 425/519 (81%), Positives = 467/519 (89%), Gaps = 1/519 (0%)

Query: 1   MGQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSR 60
           MGQETR+L DEYEV+D+LGRGGFSVVRRG +K+    N VAIKTL+R G T   G P +R
Sbjct: 1   MGQETRRLLDEYEVSDVLGRGGFSVVRRGTRKSSSGENPVAIKTLKRCGQTNLPGLPRNR 60

Query: 61  GSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLI 120
           GS        FPT KQVS+SDALLTNEILVMRKIVE+VSPHPNVI+L+DVYED +GVHL+
Sbjct: 61  GSEKRVASMAFPTWKQVSISDALLTNEILVMRKIVEHVSPHPNVINLHDVYEDPSGVHLV 120

Query: 121 LELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRE 180
           LELCSGGELFDRIVAQ RY E GAAAV++Q+AEGL ALHQANI+HRDLKPENCLFL+  E
Sbjct: 121 LELCSGGELFDRIVAQARYSEAGAAAVVKQLAEGLKALHQANIIHRDLKPENCLFLDKSE 180

Query: 181 DSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSG 240
           D+ LKIMDFGLSSVE +TDPVVGLFGSIDYVSPE L Q +I+S SDMWSLGVILYILLSG
Sbjct: 181 DATLKIMDFGLSSVEEFTDPVVGLFGSIDYVSPEVLSQGKISSASDMWSLGVILYILLSG 240

Query: 241 YPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHP 300
           YPPFIAQSNRQKQQMI+AG+FSFYE+TWKNISSSAKQLISSLLTVDP RRP+A +LL HP
Sbjct: 241 YPPFIAQSNRQKQQMIIAGDFSFYEKTWKNISSSAKQLISSLLTVDPERRPTAHQLLQHP 300

Query: 301 WVIGDSAKEEEMDAEIVSRLQSFNARRKLRAAAIASVLSSTIFLRRTKKLKNLLGSHDLN 360
           WV+GDSAK+++MDAEIVSRLQSFNARRK RAAAIASV SST+FL RTKKLK L+GSHDL 
Sbjct: 301 WVMGDSAKQDQMDAEIVSRLQSFNARRKFRAAAIASVWSSTVFL-RTKKLKTLVGSHDLT 359

Query: 361 EEEIQNLRIHFRTICANGDNATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMR 420
           +EE++NLRIHF+ IC  GDNATLSEFE+VLKAMNMSSL+PLA RIFDLFDNNRDGTVDMR
Sbjct: 360 QEELENLRIHFKEICLKGDNATLSEFEQVLKAMNMSSLIPLAGRIFDLFDNNRDGTVDMR 419

Query: 421 EILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKL 480
           EILCGFSSLR SQGDDALRLCFQMYD DRSGCITKEEVASMLRALPDDCLP DITEPGKL
Sbjct: 420 EILCGFSSLRNSQGDDALRLCFQMYDTDRSGCITKEEVASMLRALPDDCLPADITEPGKL 479

Query: 481 DEIFDLMDANNDGKVTFDEFRAAMQRDSSLQDVVLSSLR 519
           DEIFDLMDAN+DGKVTF+EF+ AMQRDSSLQDVVLSSLR
Sbjct: 480 DEIFDLMDANSDGKVTFEEFKTAMQRDSSLQDVVLSSLR 518

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|195542475|gb|ACB46142.1| calcium calmodulin-dependent protein kinase [Arachis hypogaea]

 Score =  878 bits (2269), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 432/522 (82%), Positives = 471/522 (90%), Gaps = 10/522 (1%)

Query: 1   MGQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCG-ETNQVAIKTLRRIG--STTPYGFP 57
           MG ETRKL+DEYEV++ILGRGGFSVVR+GIKK+   E   VAIKTLRR+   STTP   P
Sbjct: 1   MGYETRKLSDEYEVSEILGRGGFSVVRKGIKKSSSDEKTHVAIKTLRRVSVFSTTPGCLP 60

Query: 58  GSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGV 117
             R     S +GF PT +QVSVSDALLTNEILVMRKIVENVSPHPNV+DLYDVYED NGV
Sbjct: 61  RER-----SNMGF-PTWRQVSVSDALLTNEILVMRKIVENVSPHPNVVDLYDVYEDSNGV 114

Query: 118 HLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLN 177
           HL+LELCSGGELFDRIVAQ+RY E  AA VIRQIA GL A+H+ANIVHRDLKPENCLFL+
Sbjct: 115 HLVLELCSGGELFDRIVAQDRYSETEAATVIRQIAAGLEAIHKANIVHRDLKPENCLFLD 174

Query: 178 DREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYIL 237
            R+DSPLKIMDFGLSSVE +TDPVVGLFGSIDYVSPEAL Q +IT+KSDMWSLGVILYIL
Sbjct: 175 KRKDSPLKIMDFGLSSVEEFTDPVVGLFGSIDYVSPEALSQGKITTKSDMWSLGVILYIL 234

Query: 238 LSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELL 297
           LSGYPPFIAQSNRQKQQMIM G FSFYE+TWK IS SAKQLISSLLTVDP+RRPSAQELL
Sbjct: 235 LSGYPPFIAQSNRQKQQMIMNGNFSFYEKTWKGISQSAKQLISSLLTVDPSRRPSAQELL 294

Query: 298 NHPWVIGDSAKEEEMDAEIVSRLQSFNARRKLRAAAIASVLSSTIFLRRTKKLKNLLGSH 357
           +HPWVIGD AK+ +MD EIVSRLQSFNARRKLRAAAIASV S+T+FL RTKKLK+L+GS+
Sbjct: 295 SHPWVIGDVAKDVQMDPEIVSRLQSFNARRKLRAAAIASVWSTTVFL-RTKKLKSLIGSY 353

Query: 358 DLNEEEIQNLRIHFRTICANGDNATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTV 417
           DL EEEI++LRIHF+ IC NGDNATLS+FEEVLKA+NM SL+PLAPRIFDLFDNNRDGTV
Sbjct: 354 DLTEEEIESLRIHFKKICGNGDNATLSKFEEVLKAINMPSLIPLAPRIFDLFDNNRDGTV 413

Query: 418 DMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEP 477
           DMREILCG SSL+ S+GDDALRLCFQMYD DRSGCITKEEVASMLRALPDDCLPVDITEP
Sbjct: 414 DMREILCGLSSLKNSKGDDALRLCFQMYDADRSGCITKEEVASMLRALPDDCLPVDITEP 473

Query: 478 GKLDEIFDLMDANNDGKVTFDEFRAAMQRDSSLQDVVLSSLR 519
           GKLDEIFD MDAN+DGKVTF+EF+AAMQRDSSLQDVVLSSLR
Sbjct: 474 GKLDEIFDRMDANSDGKVTFEEFKAAMQRDSSLQDVVLSSLR 515

Source: Arachis hypogaea

Species: Arachis hypogaea

Genus: Arachis

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356554906|ref|XP_003545782.1| PREDICTED: calcium and calcium/calmodulin-dependent serine/threonine-protein kinase DMI-3 [Glycine max]

 Score =  876 bits (2264), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 423/529 (79%), Positives = 472/529 (89%), Gaps = 10/529 (1%)

Query: 1   MGQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGET-NQVAIKTLRRIG----STTPYG 55
           MG ETRKL+DEYEV+++LGRGGFSVVR+G KK+  +T   VAIKTLRR+G    S  P G
Sbjct: 1   MGNETRKLSDEYEVSEVLGRGGFSVVRKGTKKSSSDTKTHVAIKTLRRVGTASNSNNPSG 60

Query: 56  FPGSRG---SSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYE 112
           FP  +G    S+++ +GF PT +QVSVSDALLTNEILVMR+IVENVSPHPNVIDLYDVYE
Sbjct: 61  FPRPKGGEKKSTAAMMGF-PTWRQVSVSDALLTNEILVMRRIVENVSPHPNVIDLYDVYE 119

Query: 113 DQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPEN 172
           D NGVHL+LELCSGGELFDRIVAQ+RY E  AA V+RQIA GL A+H+ANIVHRDLKPEN
Sbjct: 120 DSNGVHLVLELCSGGELFDRIVAQDRYSETEAAGVVRQIASGLEAIHRANIVHRDLKPEN 179

Query: 173 CLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGV 232
           CLFL+ R DSPLKIMDFGLSSVE +TDPVVGLFGSIDYVSPEAL Q +IT+KSDMWSLGV
Sbjct: 180 CLFLDVRRDSPLKIMDFGLSSVEEFTDPVVGLFGSIDYVSPEALSQGKITTKSDMWSLGV 239

Query: 233 ILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPS 292
           ILYILLSGYPPFIAQ+NRQKQQMIM G FSFYE+TWK I+ SAKQLIS LL VDP+RRPS
Sbjct: 240 ILYILLSGYPPFIAQNNRQKQQMIMNGNFSFYEKTWKGITRSAKQLISDLLIVDPSRRPS 299

Query: 293 AQELLNHPWVIGDSAKEEEMDAEIVSRLQSFNARRKLRAAAIASVLSSTIFLRRTKKLKN 352
           AQ+LL+HPWV+GD AK++ MD EIVSRLQSFNARRKLRA AIAS+ S+TIFL RTKKLK+
Sbjct: 300 AQDLLSHPWVVGDKAKDDAMDPEIVSRLQSFNARRKLRAVAIASIWSTTIFL-RTKKLKS 358

Query: 353 LLGSHDLNEEEIQNLRIHFRTICANGDNATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNN 412
           L+G+HDL EEEI+NLR+ F+ IC +GDNATLSEFEEVLKAMNM SL+PLAPRIFDLFD+N
Sbjct: 359 LVGTHDLTEEEIENLRMSFKKICVSGDNATLSEFEEVLKAMNMPSLIPLAPRIFDLFDDN 418

Query: 413 RDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPV 472
           RDGTVDMREILCGFSS + S+GDDALRLCFQMYD DRSGCITKEEVASMLRALP+DCLP 
Sbjct: 419 RDGTVDMREILCGFSSFKNSKGDDALRLCFQMYDTDRSGCITKEEVASMLRALPEDCLPT 478

Query: 473 DITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDSSLQDVVLSSLRQQ 521
           DITEPGKLDEIFDLMDAN+DGKVTFDEF+AAMQRDSSLQDVVLSSLR Q
Sbjct: 479 DITEPGKLDEIFDLMDANSDGKVTFDEFKAAMQRDSSLQDVVLSSLRPQ 527

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356526360|ref|XP_003531786.1| PREDICTED: calcium and calcium/calmodulin-dependent serine/threonine-protein kinase-like [Glycine max]

 Score =  868 bits (2244), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 421/528 (79%), Positives = 471/528 (89%), Gaps = 9/528 (1%)

Query: 1   MGQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGET-NQVAIKTLRRIG----STTPYG 55
           MG ETRKL+DEYEV+D+LGRGGFSVVR+G KK   +T   VAIKTLRR+G    S    G
Sbjct: 1   MGYETRKLSDEYEVSDVLGRGGFSVVRKGTKKASNDTKTHVAIKTLRRVGTASNSNNHSG 60

Query: 56  FPGSRGS--SSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYED 113
           FP  +G   S+++ +GF PT +QVSVSDALLTNEILVMR+IVE VSPHPNVIDLYDV+ED
Sbjct: 61  FPRPKGGEKSTAAMMGF-PTWRQVSVSDALLTNEILVMRRIVEKVSPHPNVIDLYDVHED 119

Query: 114 QNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENC 173
            NGVHL+LELCSGGELFDRIVAQ+RY E  AA V+RQIA GL A+H+ANIVHRDLKPENC
Sbjct: 120 SNGVHLVLELCSGGELFDRIVAQDRYSETEAAGVVRQIASGLEAIHKANIVHRDLKPENC 179

Query: 174 LFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVI 233
           LFL+ R DSPLKIMDFGLSSVE +TDP+VGLFGSIDYVSPEAL Q +IT+KSDMWSLGVI
Sbjct: 180 LFLDVRRDSPLKIMDFGLSSVEEFTDPIVGLFGSIDYVSPEALSQGKITTKSDMWSLGVI 239

Query: 234 LYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSA 293
           LYILLSGYPPFIAQ+NRQKQQMIM G FSFYE+TWK I++SAKQLIS LLTVDP+RRPSA
Sbjct: 240 LYILLSGYPPFIAQNNRQKQQMIMNGNFSFYEKTWKGITNSAKQLISDLLTVDPSRRPSA 299

Query: 294 QELLNHPWVIGDSAKEEEMDAEIVSRLQSFNARRKLRAAAIASVLSSTIFLRRTKKLKNL 353
           Q+LL+HPWV+GD AK++ MD EIVSRLQSFNARRKLRAAAIASV S+ IFL RTKKLK+L
Sbjct: 300 QDLLSHPWVVGDKAKDDAMDPEIVSRLQSFNARRKLRAAAIASVWSTAIFL-RTKKLKSL 358

Query: 354 LGSHDLNEEEIQNLRIHFRTICANGDNATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNR 413
           +G+HDL EEEI+NLR+ F+ IC +GDNATLSEFEEVL+AM +SSL+PLAPRIFDLFDNNR
Sbjct: 359 VGTHDLTEEEIENLRMSFKKICVSGDNATLSEFEEVLRAMKLSSLIPLAPRIFDLFDNNR 418

Query: 414 DGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVD 473
           DGTVDMREILCGFSS + S+GDDALRLCFQMYD DRSGCITKEEVASMLRALP+DCLP D
Sbjct: 419 DGTVDMREILCGFSSFKNSKGDDALRLCFQMYDTDRSGCITKEEVASMLRALPEDCLPAD 478

Query: 474 ITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDSSLQDVVLSSLRQQ 521
           ITEPGKLDEIFDLMDAN+DGKVTFDEF+AAMQRDSSLQDVVLSSLR Q
Sbjct: 479 ITEPGKLDEIFDLMDANSDGKVTFDEFKAAMQRDSSLQDVVLSSLRPQ 526

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449494104|ref|XP_004159449.1| PREDICTED: calcium and calcium/calmodulin-dependent serine/threonine-protein kinase-like [Cucumis sativus]

 Score =  865 bits (2235), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 418/520 (80%), Positives = 467/520 (89%), Gaps = 3/520 (0%)

Query: 1   MGQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSR 60
           M Q+ RKL++EYE++D+LGRGGFSVVR+GI K+  E  +VAIKTLRRIG +   GFP +R
Sbjct: 1   MIQQARKLSEEYEISDVLGRGGFSVVRKGISKSRREKKEVAIKTLRRIGPSAFSGFPPNR 60

Query: 61  GSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLI 120
            +  S      PTRK + +SDALLTNEILVMR+IVENVSPH NVIDLYDVYED NGVHL+
Sbjct: 61  NALKSVS-SMVPTRKSM-ISDALLTNEILVMRRIVENVSPHENVIDLYDVYEDSNGVHLV 118

Query: 121 LELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRE 180
           LELCSGGELFDRIVAQ R+ E  AA V+RQIA GL ALH+ANI+HRDLKPENCLFL+  +
Sbjct: 119 LELCSGGELFDRIVAQTRHTEAKAAEVVRQIASGLKALHEANIIHRDLKPENCLFLDQSQ 178

Query: 181 DSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSG 240
           DS LKIMDFGLSSVE +TDPVVGLFGSIDYVSPEAL Q  ITSKSDMWSLGVILYILLSG
Sbjct: 179 DSSLKIMDFGLSSVEEFTDPVVGLFGSIDYVSPEALSQGTITSKSDMWSLGVILYILLSG 238

Query: 241 YPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHP 300
           YPPFIAQSNRQKQQ+IMAG+FSF+E+TWK ISSSA+QLISSLLTV+P +RPSAQELL HP
Sbjct: 239 YPPFIAQSNRQKQQLIMAGDFSFHEKTWKTISSSARQLISSLLTVNPQQRPSAQELLEHP 298

Query: 301 WVIGDSAKEEEMDAEIVSRLQSFNARRKLRAAAIASVLSSTIFLRRTKKLKNLLGSHDLN 360
           WV+G+SAK+++MDAEIVSRL+SFNARRKLRAAAIASV SSTI L RTKKLK+LLG++DL 
Sbjct: 299 WVMGNSAKQDQMDAEIVSRLKSFNARRKLRAAAIASVWSSTILL-RTKKLKSLLGTYDLT 357

Query: 361 EEEIQNLRIHFRTICANGDNATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMR 420
            EE++NLR+HF+ ICA GDNATL EFEEVLKAMNMSSL+PLAPRIFDLFDNNRDGT+DMR
Sbjct: 358 PEEVENLRLHFKKICAKGDNATLPEFEEVLKAMNMSSLIPLAPRIFDLFDNNRDGTIDMR 417

Query: 421 EILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKL 480
           EILCGFSSLR S+GDDALRLCFQMYD DRSGCITKEEVASML ALPDDCLPVDITEPGKL
Sbjct: 418 EILCGFSSLRNSRGDDALRLCFQMYDTDRSGCITKEEVASMLSALPDDCLPVDITEPGKL 477

Query: 481 DEIFDLMDANNDGKVTFDEFRAAMQRDSSLQDVVLSSLRQ 520
           DEIFDLMD+N+DGKVTFDEF+AAMQRDSSLQDVVLSSLRQ
Sbjct: 478 DEIFDLMDSNSDGKVTFDEFKAAMQRDSSLQDVVLSSLRQ 517

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296085421|emb|CBI29153.3| unnamed protein product [Vitis vinifera]

 Score =  852 bits (2200), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 413/519 (79%), Positives = 453/519 (87%), Gaps = 24/519 (4%)

Query: 1   MGQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSR 60
           MGQETR+L DEYEV+D+LGRGGFSVVRRG +K+    N VAIKTL+R G T   G P   
Sbjct: 1   MGQETRRLLDEYEVSDVLGRGGFSVVRRGTRKSSSGENPVAIKTLKRCGQTNLPGLP--- 57

Query: 61  GSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLI 120
                                ALLTNEILVMRKIVE+VSPHPNVI+L+DVYED +GVHL+
Sbjct: 58  --------------------HALLTNEILVMRKIVEHVSPHPNVINLHDVYEDPSGVHLV 97

Query: 121 LELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRE 180
           LELCSGGELFDRIVAQ RY E GAAAV++Q+AEGL ALHQANI+HRDLKPENCLFL+  E
Sbjct: 98  LELCSGGELFDRIVAQARYSEAGAAAVVKQLAEGLKALHQANIIHRDLKPENCLFLDKSE 157

Query: 181 DSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSG 240
           D+ LKIMDFGLSSVE +TDPVVGLFGSIDYVSPE L Q +I+S SDMWSLGVILYILLSG
Sbjct: 158 DATLKIMDFGLSSVEEFTDPVVGLFGSIDYVSPEVLSQGKISSASDMWSLGVILYILLSG 217

Query: 241 YPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHP 300
           YPPFIAQSNRQKQQMI+AG+FSFYE+TWKNISSSAKQLISSLLTVDP RRP+A +LL HP
Sbjct: 218 YPPFIAQSNRQKQQMIIAGDFSFYEKTWKNISSSAKQLISSLLTVDPERRPTAHQLLQHP 277

Query: 301 WVIGDSAKEEEMDAEIVSRLQSFNARRKLRAAAIASVLSSTIFLRRTKKLKNLLGSHDLN 360
           WV+GDSAK+++MDAEIVSRLQSFNARRK RAAAIASV SST+FL RTKKLK L+GSHDL 
Sbjct: 278 WVMGDSAKQDQMDAEIVSRLQSFNARRKFRAAAIASVWSSTVFL-RTKKLKTLVGSHDLT 336

Query: 361 EEEIQNLRIHFRTICANGDNATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMR 420
           +EE++NLRIHF+ IC  GDNATLSEFE+VLKAMNMSSL+PLA RIFDLFDNNRDGTVDMR
Sbjct: 337 QEELENLRIHFKEICLKGDNATLSEFEQVLKAMNMSSLIPLAGRIFDLFDNNRDGTVDMR 396

Query: 421 EILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKL 480
           EILCGFSSLR SQGDDALRLCFQMYD DRSGCITKEEVASMLRALPDDCLP DITEPGKL
Sbjct: 397 EILCGFSSLRNSQGDDALRLCFQMYDTDRSGCITKEEVASMLRALPDDCLPADITEPGKL 456

Query: 481 DEIFDLMDANNDGKVTFDEFRAAMQRDSSLQDVVLSSLR 519
           DEIFDLMDAN+DGKVTF+EF+ AMQRDSSLQDVVLSSLR
Sbjct: 457 DEIFDLMDANSDGKVTFEEFKTAMQRDSSLQDVVLSSLR 495

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|260619579|gb|ACX47471.1| Ca2+ and calmodulin-dependent protein kinase [Medicago sativa]

 Score =  851 bits (2199), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 418/524 (79%), Positives = 464/524 (88%), Gaps = 7/524 (1%)

Query: 1   MGQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGE----TNQVAIKTLRRIG-STTPYG 55
           MG  TRKL+DEYEV++ILGRGGFSVVR+G KK+  E     +QVAIKTLRR+G S  P G
Sbjct: 1   MGYGTRKLSDEYEVSEILGRGGFSVVRKGTKKSSIEEEKSQSQVAIKTLRRLGASNNPSG 60

Query: 56  FPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQN 115
            P  +     S IGF PT +QVSVSD LLTNEILVMR+IVENVSPHPNVIDLYDVYED N
Sbjct: 61  LPRKKDVGEKSTIGF-PTMRQVSVSDTLLTNEILVMRRIVENVSPHPNVIDLYDVYEDTN 119

Query: 116 GVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLF 175
           GVHL+LELCSGGELFDRIVAQ++Y E  AA V+ QIA GL A+H+ANIVHRDLKPENCLF
Sbjct: 120 GVHLVLELCSGGELFDRIVAQDKYSETEAATVVHQIASGLEAVHRANIVHRDLKPENCLF 179

Query: 176 LNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY 235
           L+ R+DSPLKIMDFGLSSVE +TDPVVGLFGSIDYVSPEAL Q +IT+KSDMWSLGVILY
Sbjct: 180 LDVRKDSPLKIMDFGLSSVEEFTDPVVGLFGSIDYVSPEALSQGKITTKSDMWSLGVILY 239

Query: 236 ILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQE 295
           ILLSGYPPFIAQ+NRQKQQMIM G FSFYE+TWK IS +AK LISSLLTVDP++RPSA E
Sbjct: 240 ILLSGYPPFIAQNNRQKQQMIMNGNFSFYEKTWKGISQAAKDLISSLLTVDPSKRPSALE 299

Query: 296 LLNHPWVIGDSAKEEEMDAEIVSRLQSFNARRKLRAAAIASVLSSTIFLRRTKKLKNLLG 355
           LL+ PWV G+ AK+ +MD EIVSRLQSFNARRKLRAAAIASV SSTIFL RTKKLK+L+G
Sbjct: 300 LLSDPWVKGEKAKDVQMDPEIVSRLQSFNARRKLRAAAIASVWSSTIFL-RTKKLKSLVG 358

Query: 356 SHDLNEEEIQNLRIHFRTICANGDNATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDG 415
           S+DL E+EI+NLR+HF+ ICA+ DNATLSEFEEVLKAMNM SL+P A RIFDLFDNNRDG
Sbjct: 359 SYDLKEDEIENLRMHFKKICADRDNATLSEFEEVLKAMNMLSLIPFASRIFDLFDNNRDG 418

Query: 416 TVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDIT 475
           TVDMREILCGFSSL+ S+G+DALRLCFQMYD DRSGCI+KEEVASMLRALP DCLP+DIT
Sbjct: 419 TVDMREILCGFSSLKNSKGEDALRLCFQMYDTDRSGCISKEEVASMLRALPYDCLPIDIT 478

Query: 476 EPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDSSLQDVVLSSLR 519
           EPGKLDEIFDLMDANNDGKVTFDEF+AAMQRDSSLQDVVLSS+R
Sbjct: 479 EPGKLDEIFDLMDANNDGKVTFDEFKAAMQRDSSLQDVVLSSIR 522

Source: Medicago sativa

Species: Medicago sativa

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	521
UNIPROTKB|A0AAR7	518	CCAMK "Calcium and calcium/cal	0.961	0.967	0.794	8.9e-212
TAIR|locus:2011201	545	CDPK1 "calcium-dependent prote	0.529	0.506	0.407	4.3e-63
TAIR|locus:2128409	529	CDPK6 "calcium-dependent prote	0.610	0.601	0.377	9.8e-62
TAIR|locus:2138897	531	CPK21 "calcium-dependent prote	0.504	0.495	0.413	3.8e-58
UNIPROTKB|E1BTD7	494	E1BTD7 "Uncharacterized protei	0.606	0.639	0.356	2.6e-55
ZFIN|ZDB-GENE-050913-146	560	camk2g1 "calcium/calmodulin-de	0.575	0.535	0.372	3.3e-55
UNIPROTKB|Q7JFN3	495	CAMK2G "Uncharacterized protei	0.589	0.620	0.365	4.2e-55
TAIR|locus:2103498	538	CPK32 "calcium-dependent prote	0.487	0.472	0.412	6.2e-55
TAIR|locus:2074338	528	CPK13 "calcium-dependent prote	0.548	0.541	0.369	6.9e-55
MGI|MGI:88258	469	Camk4 "calcium/calmodulin-depe	0.462	0.513	0.427	1e-54

UNIPROTKB|A0AAR7 CCAMK "Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase" [Lotus japonicus (taxid:34305)]

 Score = 2047 (725.6 bits), Expect = 8.9e-212, P = 8.9e-212
 Identities = 402/506 (79%), Positives = 453/506 (89%)

Query:     1 MG-QETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXX 59
             MG  +TRKL+DEYE+++ILGRGGFSVVR+G KK+  E  QVAIKTLRR+GS+ P G    
Sbjct:     1 MGYDQTRKLSDEYEISEILGRGGFSVVRKGTKKSGNEKTQVAIKTLRRLGSS-PSG-TGG 58

Query:    60 XXXXXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHL 119
                     +GF P+ +QVSVSDALLTNEILVMR+IVENVSPHPNVIDLYDV ED NGVHL
Sbjct:    59 GQKSTATVMGF-PSLRQVSVSDALLTNEILVMRRIVENVSPHPNVIDLYDVCEDSNGVHL 117

Query:   120 ILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDR 179
             +LELCSGGELFDRIVAQ++Y E  AAAV+RQIA GL A+H+A+IVHRDLKPENCLFL+ R
Sbjct:   118 VLELCSGGELFDRIVAQDKYAETEAAAVVRQIAAGLEAVHKADIVHRDLKPENCLFLDSR 177

Query:   180 EDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS 239
             +DSPLKIMDFGLSSVE +TDPVVGLFGSIDYVSPEAL Q +IT+KSDMWSLGVILYILLS
Sbjct:   178 KDSPLKIMDFGLSSVEEFTDPVVGLFGSIDYVSPEALSQGKITAKSDMWSLGVILYILLS 237

Query:   240 GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH 299
             GYPPFIAQ+NRQKQQMI+ G FSFYE+TWK I+ SAKQLISSLLTVDP++RPSAQELL+H
Sbjct:   238 GYPPFIAQNNRQKQQMIINGNFSFYEKTWKGITQSAKQLISSLLTVDPSKRPSAQELLSH 297

Query:   300 PWVIGDSAKEEEMDAEIVSRLQSFNARRKLRAAAIASVLSSTIFLRRTKKLKNLLGSHDL 359
             PWV GD AK+E+MD EIVSRLQSFNARRKLRAAAIASV SSTIFLR TKKL++L+G++DL
Sbjct:   298 PWVRGDKAKDEQMDPEIVSRLQSFNARRKLRAAAIASVWSSTIFLR-TKKLRSLVGTYDL 356

Query:   360 NEEEIQNLRIHFRTICANGDNATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDM 419
              EEEI++LRIHF+ IC NGDNATLSEF EVLKAM M SL+PLAPRIFDLFDNNRDGT+DM
Sbjct:   357 KEEEIESLRIHFKKICGNGDNATLSEFVEVLKAMKMPSLIPLAPRIFDLFDNNRDGTIDM 416

Query:   420 REILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGK 479
             REILCGFSSL+ S+GDDALRLCFQMYD DRSGCITKEEVASML ALP++CLP DITEPGK
Sbjct:   417 REILCGFSSLKNSKGDDALRLCFQMYDTDRSGCITKEEVASMLCALPEECLPADITEPGK 476

Query:   480 LDEIFDLMDANNDGKVTFDEFRAAMQ 505
             LDEIFDLMDAN+DGKVTF+EF+AAMQ
Sbjct:   477 LDEIFDLMDANSDGKVTFEEFKAAMQ 502

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=IDA

GO:0009608 "response to symbiont" evidence=IDA

GO:0009931 "calcium-dependent protein serine/threonine kinase activity" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

TAIR|locus:2011201 CDPK1 "calcium-dependent protein kinase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 517 (187.1 bits), Expect = 4.3e-63, Sum P(3) = 4.3e-63
 Identities = 117/287 (40%), Positives = 165/287 (57%)

Query:    74 RKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRI 133
             R  V + D  +  E+ +M  + E    HPNV+ L   YED   VHL++ELC GGELFDRI
Sbjct:   100 RTAVDIED--VRREVAIMSTLPE----HPNVVKLKASYEDNENVHLVMELCEGGELFDRI 153

Query:   134 VAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS 193
             VA+  Y E  AAAV R IAE +   H   ++HRDLKPEN LF N +E+SPLK +DFGLS 
Sbjct:   154 VARGHYTERAAAAVARTIAEVVMMCHSNGVMHRDLKPENFLFANKKENSPLKAIDFGLSV 213

Query:   194 VEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQ 253
                  D    + GS  Y++PE L +D      D+WS GVI+YILL G PPF A++ +   
Sbjct:   214 FFKPGDKFTEIVGSPYYMAPEVLKRD-YGPGVDVWSAGVIIYILLCGVPPFWAETEQGVA 272

Query:   254 QMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAKEEEMD 313
               I+ G   F    W  IS SAK L+  +L  DP +R +AQ++L HPW I ++ K   + 
Sbjct:   273 LAILRGVLDFKRDPWPQISESAKSLVKQMLDPDPTKRLTAQQVLAHPW-IQNAKKAPNVP 331

Query:   314 -AEIV-SRLQSFNARRKLRAAAIASVLSSTIFLRRTKKLKNLLGSHD 358
               +IV SRL+ F+   + +   +  V++  + ++  + +KN+    D
Sbjct:   332 LGDIVRSRLKQFSMMNRFKKKVLR-VIAEHLSIQEVEVIKNMFSLMD 377

GO:0004672 "protein kinase activity" evidence=IEA;TAS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=ISS

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006499 "N-terminal protein myristoylation" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0007154 "cell communication" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA;TAS

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0045087 "innate immune response" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2128409 CDPK6 "calcium-dependent protein kinase 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 536 (193.7 bits), Expect = 9.8e-62, Sum P(3) = 9.8e-62
 Identities = 123/326 (37%), Positives = 185/326 (56%)

Query:    72 PTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFD 131
             PTR+ V   D     ++    +I+ ++S H N++DL   YED++ V+LI+ELC GGELFD
Sbjct:   110 PTRRLVHKDDI---EDVRREVQIMHHLSGHRNIVDLKGAYEDRHSVNLIMELCEGGELFD 166

Query:   132 RIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGL 191
             RI+++  Y E  AA + RQ+   + + H   ++HRDLKPEN LFL+  E+SPLK  DFGL
Sbjct:   167 RIISKGLYSERAAADLCRQMVMVVHSCHSMGVMHRDLKPENFLFLSKDENSPLKATDFGL 226

Query:   192 SSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQ 251
             S      D    L GS  YV+PE L ++    ++D+WS GVILYILLSG PPF  ++   
Sbjct:   227 SVFFKPGDKFKDLVGSAYYVAPEVLKRN-YGPEADIWSAGVILYILLSGVPPFWGENETG 285

Query:   252 KQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDS-AKEE 310
                 I+ G+  F    W  +S  AK L+  +L  DP  R +A E+LNHPW+  D  A ++
Sbjct:   286 IFDAILQGQLDFSADPWPALSDGAKDLVRKMLKYDPKDRLTAAEVLNHPWIREDGEASDK 345

Query:   311 EMDAEIVSRLQSFNARRKLRAAAIASVLSSTIFLRRTKKLKNLLGSHDLNEEEIQNLRIH 370
              +D  ++SR++ F A  KL+  A+  V++  +       LK +  S D +   I  L   
Sbjct:   346 PLDNAVLSRMKQFRAMNKLKKMAL-KVIAENLSEEEIIGLKEMFKSLDTDNNGIVTLE-E 403

Query:   371 FRT-ICANGDNATLSEFEEVLKAMNM 395
              RT +   G   + +E  ++++A +M
Sbjct:   404 LRTGLPKLGSKISEAEIRQLMEAADM 429

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=ISS

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005773 "vacuole" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=IMP

GO:0010119 "regulation of stomatal movement" evidence=IMP

GO:0010359 "regulation of anion channel activity" evidence=RCA;IMP

GO:0005515 "protein binding" evidence=IPI

GO:0009651 "response to salt stress" evidence=IMP

GO:0016020 "membrane" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0006970 "response to osmotic stress" evidence=RCA

GO:0032880 "regulation of protein localization" evidence=RCA

GO:0046686 "response to cadmium ion" evidence=RCA

GO:0051049 "regulation of transport" evidence=RCA

TAIR|locus:2138897 CPK21 "calcium-dependent protein kinase 21" [Arabidopsis thaliana (taxid:3702)]

 Score = 543 (196.2 bits), Expect = 3.8e-58, Sum P(2) = 3.8e-58
 Identities = 113/273 (41%), Positives = 168/273 (61%)

Query:    93 KIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIA 152
             +I++ +S  PN++++   YED+  +HL++ELC+GGELFDRI+AQ  Y E  AA +IR I 
Sbjct:   130 QIMQYLSGQPNIVEIKGAYEDRQSIHLVMELCAGGELFDRIIAQGHYSERAAAGIIRSIV 189

Query:   153 EGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV--EG--YTDPVVGLFGSI 208
               +   H   +VHRDLKPEN L  +  E++ LK  DFGLS    EG  Y D V    GS 
Sbjct:   190 NVVQICHFMGVVHRDLKPENFLLSSKEENAMLKATDFGLSVFIEEGKVYRDIV----GSA 245

Query:   209 DYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTW 268
              YV+PE L +     + D+WS GVILYILLSG PPF A++ +     ++ GE  F  + W
Sbjct:   246 YYVAPEVLRRS-YGKEIDIWSAGVILYILLSGVPPFWAENEKGIFDEVIKGEIDFVSEPW 304

Query:   269 KNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAKEEEMDAEIVSRLQSFNARRK 328
              +IS SAK L+  +LT DP RR +A ++L HPW+ G  A ++ +D+ ++SR++ F A  K
Sbjct:   305 PSISESAKDLVRKMLTKDPKRRITAAQVLEHPWIKGGEAPDKPIDSAVLSRMKQFRAMNK 364

Query:   329 LRAAAIASVLSSTIFLRRTKKLKNLLGSHDLNE 361
             L+  A+  V++ ++     K LK +  + D ++
Sbjct:   365 LKKLAL-KVIAESLSEEEIKGLKTMFANIDTDK 396

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=ISS

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0019903 "protein phosphatase binding" evidence=IPI

GO:0009506 "plasmodesma" evidence=IDA

UNIPROTKB|E1BTD7 E1BTD7 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 503 (182.1 bits), Expect = 2.6e-55, Sum P(2) = 2.6e-55
 Identities = 117/328 (35%), Positives = 178/328 (54%)

Query:   101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
             HPN++ L+D   ++   +L+ +L +GGELF+ IVA+E Y E  A+  I QI E +  +HQ
Sbjct:    70 HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQ 129

Query:   161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLS-SVEGYTDPVVGLFGSIDYVSPEALLQD 219
              +IVHRDLKPEN L  +  + + +K+ DFGL+  V+G      G  G+  Y+SPE L +D
Sbjct:   130 HDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKD 189

Query:   220 RITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLI 279
                   D+W+ GVILYILL GYPPF  +   +  Q I AG + F    W  ++  AK LI
Sbjct:   190 PYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLI 249

Query:   280 SSLLTVDPNRRPSAQELLNHPWVIGDSAKEEEMDA-EIVSRLQSFNARRKLRAAAIASVL 338
             + +LT++P +R +A + L HPWV   S     M   E V  L+ FNARRKL+ A + ++L
Sbjct:   250 NQMLTINPAKRITADQALKHPWVCQRSTVASMMHRQETVECLRKFNARRKLKGAILTTML 309

Query:   339 SSTIFLRRTKKLKNLLGSHDLNEEEIQNLRIHFRT--ICANGDNATLSEFEEVLKAMNMS 396
              S    R     K+LL       +E Q   +H  T  I  + ++   +  +E LK +   
Sbjct:   310 VS----RNFSAAKSLLNKKSDGVKEPQTTVVHNATDGIKGSTESCNTTTEDEDLK-VRKQ 364

Query:   397 SLVPLAPRIFDLFDNNRDGTVDMREILC 424
              ++ +  ++ +  +N   G  D    +C
Sbjct:   365 EIIKITEQLIEAINN---GDFDAYTKIC 389

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

ZFIN|ZDB-GENE-050913-146 camk2g1 "calcium/calmodulin-dependent protein kinase (CaM kinase) II gamma 1" [Danio rerio (taxid:7955)]

 Score = 496 (179.7 bits), Expect = 3.3e-55, Sum P(2) = 3.3e-55
 Identities = 118/317 (37%), Positives = 176/317 (55%)

Query:   101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
             HPN++ L+D   ++   +L+ +L +GGELF+ IVA+E Y E  A+  I QI E +  +HQ
Sbjct:    70 HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCISQILESVNHIHQ 129

Query:   161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLS-SVEGYTDPVVGLFGSIDYVSPEALLQD 219
              +IVHRDLKPEN L  +  + + +K+ DFGL+  V+G      G  G+  Y+SPE L +D
Sbjct:   130 HDIVHRDLKPENLLLASKMKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKD 189

Query:   220 RITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLI 279
                   D+W+ GVILYILL GYPPF  +   +  Q I AG + F    W  ++  AK LI
Sbjct:   190 PYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLI 249

Query:   280 SSLLTVDPNRRPSAQELLNHPWVIGDSAKEEEMDA-EIVSRLQSFNARRKLRAAAIASVL 338
             + +LT++P +R +A++ L HPWV   S     M   E V  L+ FNARRKL+ A + ++L
Sbjct:   250 NQMLTINPAKRITAEQALKHPWVCQRSTVASMMHRQETVECLRKFNARRKLKGAILTTML 309

Query:   339 SSTIFLRRTKKLKNLLGSHDLNEEEIQNLRIHFRTICANGDNATLSEFEEVLKAMNMSSL 398
              S    R     K+LL       ++   ++ H +T   N  N+ +S     +K  N +S 
Sbjct:   310 VS----RNFSACKSLLN------KKADGVK-H-QT--NNTKNSVVSAVVNAMKESNTASS 355

Query:   399 VPLAPRIFDLFDNNRDG 415
              P+ P+   +  N  DG
Sbjct:   356 TPMEPQT-TVVHNPVDG 371

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=IEA;IMP

GO:0005516 "calmodulin binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0046777 "protein autophosphorylation" evidence=IMP

GO:0003146 "heart jogging" evidence=IMP

GO:0048793 "pronephros development" evidence=IGI;IMP

GO:0016301 "kinase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

UNIPROTKB|Q7JFN3 CAMK2G "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 499 (180.7 bits), Expect = 4.2e-55, Sum P(2) = 4.2e-55
 Identities = 115/315 (36%), Positives = 174/315 (55%)

Query:   101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
             HPN++ L+D   ++   +L+ +L +GGELF+ IVA+E Y E  A+  I QI E +  +HQ
Sbjct:    70 HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQ 129

Query:   161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLS-SVEGYTDPVVGLFGSIDYVSPEALLQD 219
              +IVHRDLKPEN L  +  + + +K+ DFGL+  V+G      G  G+  Y+SPE L +D
Sbjct:   130 HDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKD 189

Query:   220 RITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLI 279
                   D+W+ GVILYILL GYPPF  +   +  Q I AG + F    W  ++  AK LI
Sbjct:   190 PYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLI 249

Query:   280 SSLLTVDPNRRPSAQELLNHPWVIGDSAKEEEMDA-EIVSRLQSFNARRKLRAAAIASVL 338
             + +LT++P +R +A + L HPWV   S     M   E V  L+ FNARRKL+ A + ++L
Sbjct:   250 NQMLTINPAKRITADQALKHPWVCQRSTVASMMHRQETVECLRKFNARRKLKGAILTTML 309

Query:   339 SSTIFLRRTKKLKNLLGSHDLNEEEIQNLRIHFRT--ICANGDNATLSEFEEVLKAMNMS 396
              S  F    K L N     D   +E Q   +H  T  I  + ++   +  +E LK +   
Sbjct:   310 VSRNF-SAAKSLLNK--KSDGGVKEPQTTVVHNATDGIKGSTESCNTTTEDEDLK-VRKQ 365

Query:   397 SLVPLAPRIFDLFDN 411
              ++ +  ++ +  +N
Sbjct:   366 EIIKITEQLIEAINN 380

GO:0005954 "calcium- and calmodulin-dependent protein kinase complex" evidence=TAS

GO:0005524 "ATP binding" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IEA

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=IEA

TAIR|locus:2103498 CPK32 "calcium-dependent protein kinase 32" [Arabidopsis thaliana (taxid:3702)]

 Score = 495 (179.3 bits), Expect = 6.2e-55, Sum P(3) = 6.2e-55
 Identities = 108/262 (41%), Positives = 155/262 (59%)

Query:    74 RKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRI 133
             R  V + D  +  E+ +MR + E    HPNV+ L + YED++ VHL++ELC GGELFDRI
Sbjct:   100 RTAVDIED--VRREVEIMRHMPE----HPNVVTLKETYEDEHAVHLVMELCEGGELFDRI 153

Query:   134 VAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS 193
             VA+  Y E  AAAV + I E +   H+  ++HRDLKPEN LF N +E +PLK +DFGLS 
Sbjct:   154 VARGHYTERAAAAVTKTIMEVVQVCHKHGVMHRDLKPENFLFGNKKETAPLKAIDFGLSV 213

Query:   194 VEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQ 253
                  +    + GS  Y++PE L ++    + D+WS GVILYILL G PPF A++ +   
Sbjct:   214 FFKPGERFNEIVGSPYYMAPEVLKRN-YGPEVDIWSAGVILYILLCGVPPFWAETEQGVA 272

Query:   254 QMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIG-DSAKEEEM 312
             Q I+     F    W  +S +AK LI  +L  D  RR +AQ++L+HPW+    +A    +
Sbjct:   273 QAIIRSVLDFRRDPWPKVSENAKDLIRKMLDPDQKRRLTAQQVLDHPWLQNAKTAPNVSL 332

Query:   313 DAEIVSRLQSFNARRKLRAAAI 334
                + +RL+ F    KL+  A+
Sbjct:   333 GETVRARLKQFTVMNKLKKRAL 354

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=ISS

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004698 "calcium-dependent protein kinase C activity" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=IDA

GO:0009651 "response to salt stress" evidence=IEP

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA;IMP

GO:0005737 "cytoplasm" evidence=IDA

GO:0009737 "response to abscisic acid stimulus" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0007154 "cell communication" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0009963 "positive regulation of flavonoid biosynthetic process" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2074338 CPK13 "calcium-dependent protein kinase 13" [Arabidopsis thaliana (taxid:3702)]

 Score = 500 (181.1 bits), Expect = 6.9e-55, Sum P(2) = 6.9e-55
 Identities = 109/295 (36%), Positives = 168/295 (56%)

Query:    74 RKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRI 133
             R  V + D  +  E+ +M+ + ++ S    ++ L +  ED N VHL++ELC GGELFDRI
Sbjct:    91 RTAVDIED--VKREVAIMKHLPKSSS----IVTLKEACEDDNAVHLVMELCEGGELFDRI 144

Query:   134 VAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS 193
             VA+  Y E  AA V + I E +   H+  ++HRDLKPEN LF N +E+SPLK +DFGLS 
Sbjct:   145 VARGHYTERAAAGVTKTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSI 204

Query:   194 VEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQ 253
                  +    + GS  Y++PE L ++    + D+WS GVILYILL G PPF A+S +   
Sbjct:   205 FFKPGEKFSEIVGSPYYMAPEVLKRN-YGPEIDIWSAGVILYILLCGVPPFWAESEQGVA 263

Query:   254 QMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIG-DSAKEEEM 312
             Q I+ G   F  + W NIS +AK L+  +L  DP RR +A+++L HPW+     A    +
Sbjct:   264 QAILRGVIDFKREPWPNISETAKNLVRQMLEPDPKRRLTAKQVLEHPWIQNAKKAPNVPL 323

Query:   313 DAEIVSRLQSFNARRKLRAAAIASVLSSTIFLRRTKKLKNLLGSHDLNEEEIQNL 367
                + SRL+ F+   + +  A+  V++  +     + +K +    D + + I ++
Sbjct:   324 GDVVKSRLKQFSVMNRFKRKALR-VIAEFLSTEEVEDIKVMFNKMDTDNDGIVSI 377

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=ISS

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IDA

MGI|MGI:88258 Camk4 "calcium/calmodulin-dependent protein kinase IV" [Mus musculus (taxid:10090)]

 Score = 488 (176.8 bits), Expect = 1.0e-54, Sum P(3) = 1.0e-54
 Identities = 104/243 (42%), Positives = 144/243 (59%)

Query:   101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
             HPN+I L +++E    + L+LEL +GGELFDRIV +  Y E  A   ++QI E +A LH+
Sbjct:    94 HPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDARDAVKQILEAVAYLHE 153

Query:   161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDR 220
               IVHRDLKPEN L+     D+PLKI DFGLS +  +   +  + G+  Y +PE L    
Sbjct:   154 NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCA 213

Query:   221 ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQ-QMIMAGEFSFYEQTWKNISSSAKQLI 279
                + DMWS+G+I YILL G+ PF  +   Q   + I+  E+ F    W  +S +AK L+
Sbjct:   214 YGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLV 273

Query:   280 SSLLTVDPNRRPSAQELLNHPWVIGDSAKEEEMDAEIVSRLQSFNARRKLRAAAIASVLS 339
               L+ +DP +R +  + L HPWV G +A    MD     +LQ FNARRKL+AA  A V S
Sbjct:   274 KKLIVLDPKKRLTTFQALQHPWVTGKAANFVHMDTA-QKKLQEFNARRKLKAAVKAVVAS 332

Query:   340 STI 342
             S +
Sbjct:   333 SRL 335

GO:0000166 "nucleotide binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=ISO;TAS

GO:0005515 "protein binding" evidence=IPI

GO:0005516 "calmodulin binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0006468 "protein phosphorylation" evidence=ISO;IDA;IMP;TAS

GO:0006913 "nucleocytoplasmic transport" evidence=IDA

GO:0006954 "inflammatory response" evidence=IEA

GO:0007165 "signal transduction" evidence=IDA

GO:0007270 "neuron-neuron synaptic transmission" evidence=IMP

GO:0007616 "long-term memory" evidence=ISO

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0043011 "myeloid dendritic cell differentiation" evidence=ISO

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=ISO;IMP

GO:0046827 "positive regulation of protein export from nucleus" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q43531	CCAMK_LILLO	2, ., 7, ., 1, 1, ., 1, 7	0.7634	0.9827	0.9846	N/A	no
Q8ICR0	CDPK2_PLAF7	2, ., 7, ., 1, 1, ., 1	0.3259	0.8176	0.8369	yes	no
Q07250	KCCS_MALDO	2, ., 7, ., 1, 1, ., 1, 7	0.7268	0.7735	0.9710	N/A	no
Q6RET6	CCAMK_PEA	2, ., 7, ., 1, 1, ., 1, 7	0.7633	0.9808	0.9696	N/A	no
Q6RET7	CCAMK_MEDTR	2, ., 7, ., 1, 1, ., 1, 7	0.7996	0.9923	0.9885	N/A	no
Q6AVM3	CCAMK_ORYSJ	2, ., 7, ., 1, 1, ., 1, 7	0.7181	0.9827	0.9922	yes	no
A0AAR7	CCAMK_LOTJA	2, ., 7, ., 1, 1, ., 1, 7	0.7965	0.9827	0.9884	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.17	0.979
4th Layer	2.7.11.1	LOW CONFIDENCE prediction!
3rd Layer	2.7.11	0.983

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	521
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	6e-87
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	9e-77
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	7e-52
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	2e-48
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	4e-48
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	3e-45
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	9e-42
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	2e-41
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	4e-40
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	7e-39
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	1e-38
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	3e-38
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	3e-38
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	5e-38
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	1e-37
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	2e-37
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	6e-34
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	1e-33
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	2e-33
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	2e-33
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	3e-33
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	5e-33
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	1e-32
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	1e-32
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	8e-32
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	1e-31
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	2e-31
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	1e-30
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	1e-29
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	2e-29
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	2e-29
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	2e-29
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	4e-29
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	4e-29
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	8e-29
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	3e-28
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	3e-28
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	7e-28
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	1e-27
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	3e-27
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	4e-27
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	4e-27
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	5e-27
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	6e-27
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	1e-26
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	1e-26
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	2e-26
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	5e-26
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	7e-26
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	9e-26
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	1e-25
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	2e-25
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	2e-25
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	3e-25
PHA03390	267	PHA03390, pk1, serine/threonine-protein kinase 1;	3e-25
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	3e-25
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	5e-25
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	7e-25
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	4e-24
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	7e-24
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	8e-24
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	9e-24
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	9e-24
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	1e-23
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	1e-23
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	1e-23
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	2e-23
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	2e-23
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	3e-23
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	3e-23
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	5e-23
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	5e-23
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	5e-23
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	5e-23
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	6e-23
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	6e-23
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	9e-23
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	1e-22
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	1e-22
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	1e-22
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	1e-22
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	1e-22
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	2e-22
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	2e-22
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	3e-22
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	3e-22
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	4e-22
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	4e-22
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	7e-22
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	7e-22
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	8e-22
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	8e-22
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	1e-21
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	1e-21
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	2e-21
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	2e-21
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	3e-21
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	3e-21
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	4e-21
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	4e-21
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	7e-21
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	1e-20
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	1e-20
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	2e-20
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	2e-20
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	2e-20
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	3e-20
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	5e-20
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	5e-20
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	6e-20
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	7e-20
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	1e-19
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	1e-19
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	1e-19
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	2e-19
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	2e-19
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	2e-19
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	3e-19
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	3e-19
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	3e-19
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	4e-19
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	4e-19
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	5e-19
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	5e-19
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	5e-19
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	8e-19
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	1e-18
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	1e-18
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	1e-18
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	1e-18
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	2e-18
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	2e-18
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	2e-18
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	3e-18
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	3e-18
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	3e-18
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	4e-18
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	4e-18
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	4e-18
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	4e-18
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	4e-18
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	5e-18
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	5e-18
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	5e-18
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	5e-18
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	5e-18
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	6e-18
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	7e-18
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	7e-18
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	9e-18
PHA03209	357	PHA03209, PHA03209, serine/threonine kinase US3; P	9e-18
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	1e-17
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	2e-17
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	2e-17
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	2e-17
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	3e-17
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	3e-17
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	4e-17
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	4e-17
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	5e-17
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	5e-17
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	6e-17
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	6e-17
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	7e-17
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	8e-17
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	1e-16
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	1e-16
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	1e-16
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	1e-16
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	1e-16
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	2e-16
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	2e-16
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	2e-16
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	2e-16
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	2e-16
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	2e-16
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	2e-16
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	2e-16
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	3e-16
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	3e-16
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	4e-16
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	5e-16
COG5126	160	COG5126, FRQ1, Ca2+-binding protein (EF-Hand super	6e-16
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	8e-16
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	9e-16
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	9e-16
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	9e-16
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	1e-15
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	2e-15
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	2e-15
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	2e-15
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	2e-15
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	2e-15
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	2e-15
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	2e-15
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	3e-15
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	3e-15
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	3e-15
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	3e-15
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	3e-15
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	4e-15
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	5e-15
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	8e-15
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	8e-15
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	8e-15
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	1e-14
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	1e-14
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	2e-14
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	2e-14
PHA03207	392	PHA03207, PHA03207, serine/threonine kinase US3; P	2e-14
PTZ00266	1021	PTZ00266, PTZ00266, NIMA-related protein kinase; P	2e-14
cd05115	257	cd05115, PTKc_Zap-70, Catalytic domain of the Prot	2e-14
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	4e-14
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	4e-14
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	5e-14
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	6e-14
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	6e-14
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	6e-14
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	7e-14
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	8e-14
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	2e-13
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	2e-13
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	2e-13
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	2e-13
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	2e-13
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	3e-13
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	4e-13
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	8e-13
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	1e-12
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	1e-12
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	1e-12
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	2e-12
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	2e-12
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	2e-12
cd05042	269	cd05042, PTKc_Aatyk, Catalytic domain of the Prote	4e-12
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	5e-12
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	5e-12
cd00051	63	cd00051, EFh, EF-hand, calcium binding motif; A di	7e-12
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	1e-11
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	1e-11
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	2e-11
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	2e-11
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	2e-11
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	3e-11
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	3e-11
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	4e-11
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	4e-11
PRK13184	932	PRK13184, pknD, serine/threonine-protein kinase; R	4e-11
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	5e-11
cd05047	270	cd05047, PTKc_Tie, Catalytic domain of Tie Protein	5e-11
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	6e-11
cd05109	279	cd05109, PTKc_HER2, Catalytic domain of the Protei	7e-11
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	1e-10
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	1e-10
cd05576	237	cd05576, STKc_RPK118_like, Catalytic domain of the	1e-10
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	1e-10
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	1e-10
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	2e-10
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	2e-10
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	2e-10
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	4e-10
PHA03211	461	PHA03211, PHA03211, serine/threonine kinase US3; P	4e-10
PHA03212	391	PHA03212, PHA03212, serine/threonine kinase US3; P	6e-10
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	7e-10
cd05087	269	cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of t	1e-09
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	1e-09
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	2e-09
pfam13499	60	pfam13499, EF_hand_5, EF-hand domain pair	2e-09
cd07868	317	cd07868, STKc_CDK8, Catalytic domain of the Serine	2e-09
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	2e-09
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	3e-09
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	3e-09
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	3e-09
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	3e-09
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	4e-09
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	4e-09
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	5e-09
cd05102	338	cd05102, PTKc_VEGFR3, Catalytic domain of the Prot	5e-09
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	6e-09
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	6e-09
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	8e-09
cd07867	317	cd07867, STKc_CDC2L6, Catalytic domain of Serine/T	1e-08
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	1e-08
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	1e-08
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	1e-08
cd05103	343	cd05103, PTKc_VEGFR2, Catalytic domain of the Prot	3e-08
cd05043	280	cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece	4e-08
cd05074	273	cd05074, PTKc_Tyro3, Catalytic domain of the Prote	4e-08
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	4e-08
cd08216	314	cd08216, PK_STRAD, Pseudokinase domain of STE20-re	6e-08
PLN00113	968	PLN00113, PLN00113, leucine-rich repeat receptor-l	9e-08
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	1e-07
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	1e-07
cd05111	279	cd05111, PTK_HER3, Pseudokinase domain of the Prot	1e-07
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	2e-07
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	2e-07
cd05086	268	cd05086, PTKc_Aatyk2, Catalytic domain of the Prot	2e-07
PHA03210	501	PHA03210, PHA03210, serine/threonine kinase US3; P	2e-07
cd05105	400	cd05105, PTKc_PDGFR_alpha, Catalytic domain of the	3e-07
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	4e-07
pfam13833	53	pfam13833, EF_hand_6, EF-hand domain pair	4e-07
PLN03225	566	PLN03225, PLN03225, Serine/threonine-protein kinas	5e-07
cd05104	375	cd05104, PTKc_Kit, Catalytic domain of the Protein	6e-07
cd00051	63	cd00051, EFh, EF-hand, calcium binding motif; A di	8e-07
cd05064	266	cd05064, PTKc_EphR_A10, Catalytic domain of the Pr	1e-06
cd05107	401	cd05107, PTKc_PDGFR_beta, Catalytic domain of the	1e-06
smart00054	29	smart00054, EFh, EF-hand, calcium binding motif	1e-06
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	1e-06
pfam00036	29	pfam00036, efhand, EF hand	3e-06
PLN03224	507	PLN03224, PLN03224, probable serine/threonine prot	5e-06
cd05120	155	cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphot	8e-06
pfam13499	60	pfam13499, EF_hand_5, EF-hand domain pair	1e-05
cd00052	67	cd00052, EH, Eps15 homology domain; found in prote	1e-05
cd00051	63	cd00051, EFh, EF-hand, calcium binding motif; A di	6e-05
PHA02988	283	PHA02988, PHA02988, hypothetical protein; Provisio	7e-05
TIGR03724	199	TIGR03724, arch_bud32, Kae1-associated kinase Bud3	1e-04
cd05076	274	cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) do	1e-04
pfam13202	25	pfam13202, EF_hand_3, EF hand	1e-04
cd00051	63	cd00051, EFh, EF-hand, calcium binding motif; A di	3e-04
pfam13405	30	pfam13405, EF_hand_4, EF-hand domain	3e-04
cd05077	262	cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) do	5e-04
PTZ00183	158	PTZ00183, PTZ00183, centrin; Provisional	6e-04
PTZ00284	467	PTZ00284, PTZ00284, protein kinase; Provisional	8e-04
PRK12309	391	PRK12309, PRK12309, transaldolase/EF-hand domain-c	8e-04
COG3642	204	COG3642, COG3642, Mn2+-dependent serine/threonine	0.001
cd08226	328	cd08226, PK_STRAD_beta, Pseudokinase domain of STE	0.001
cd00213	88	cd00213, S-100, S-100: S-100 domain, which represe	0.001
pfam13405	30	pfam13405, EF_hand_4, EF-hand domain	0.002
cd08227	327	cd08227, PK_STRAD_alpha, Pseudokinase domain of ST	0.002
PRK09605	535	PRK09605, PRK09605, bifunctional UGMP family prote	0.003

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  267 bits (686), Expect = 6e-87
 Identities = 98/291 (33%), Positives = 145/291 (49%), Gaps = 37/291 (12%)

Query: 12  YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFF 71
           YE+ + LG G F  V     K  G+   VAIK +++                        
Sbjct: 1   YEILEKLGEGSFGKVYLARDKKTGK--LVAIKVIKK------------------------ 34

Query: 72  PTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFD 131
              K++      +  EI +++K+      HPN++ LYDV+ED++ ++L++E C GG+LFD
Sbjct: 35  ---KKIKKDRERILREIKILKKL-----KHPNIVRLYDVFEDEDKLYLVMEYCEGGDLFD 86

Query: 132 RIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGL 191
            +  + R  E  A   +RQI   L  LH   IVHRDLKPEN + L+  ED  +K+ DFGL
Sbjct: 87  LLKKRGRLSEDEARFYLRQILSALEYLHSKGIVHRDLKPEN-ILLD--EDGHVKLADFGL 143

Query: 192 SSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQ 251
           +      + +    G+ +Y++PE LL        D+WSLGVILY LL+G PPF       
Sbjct: 144 ARQLDPGEKLTTFVGTPEYMAPEVLLGKGYGKAVDIWSLGVILYELLTGKPPFPGDDQLL 203

Query: 252 KQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
           +    +      +     +IS  AK LI  LL  DP +R +A+E L HP+ 
Sbjct: 204 ELFKKIGKPKPPFPPPEWDISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF 254

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score =  241 bits (618), Expect = 9e-77
 Identities = 101/296 (34%), Positives = 146/296 (49%), Gaps = 41/296 (13%)

Query: 12  YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFF 71
           YE+   LG G F  V +   K  G+   VA+K L++                        
Sbjct: 1   YELLRKLGSGSFGTVYKAKHKGTGK--IVAVKILKK------------------------ 34

Query: 72  PTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFD 131
             R + S  D     EI ++R++      HPN++ L D +ED++ ++L++E C GG+LFD
Sbjct: 35  --RSEKSKKDQTARREIRILRRL-----SHPNIVRLIDAFEDKDHLYLVMEYCEGGDLFD 87

Query: 132 RIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGL 191
            +       E  A  +  QI  GL  LH   I+HRDLKPEN L   +     +KI DFGL
Sbjct: 88  YLSRGGPLSEDEAKKIALQILRGLEYLHSNGIIHRDLKPENILLDENGV---VKIADFGL 144

Query: 192 SSVEGYTDPVV-GLFGSIDYVSPEALLQDR-ITSKSDMWSLGVILYILLSGYPPFIAQSN 249
           +     +   +    G+  Y++PE LL       K D+WSLGVILY LL+G PPF  ++ 
Sbjct: 145 AKKLLKSSSSLTTFVGTPWYMAPEVLLGGNGYGPKVDVWSLGVILYELLTGKPPFSGENI 204

Query: 250 RQKQQM---IMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
             + Q+   I+     F E  W + S  AK LI   L  DP++RP+A+E+L HPW 
Sbjct: 205 LDQLQLIRRILGPPLEFDEPKWSSGSEEAKDLIKKCLNKDPSKRPTAEEILQHPWF 260

Length = 260

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score =  175 bits (446), Expect = 7e-52
 Identities = 89/286 (31%), Positives = 129/286 (45%), Gaps = 74/286 (25%)

Query: 18  LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQV 77
           LG GGF  V     K  G+  +VAIK +++  S++                         
Sbjct: 1   LGEGGFGTVYLARDKKTGK--KVAIKIIKKEDSSSLLEE--------------------- 37

Query: 78  SVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE 137
                 L  EI +++K+      HPN++ LY V+ED+N ++L++E C GG L D +   E
Sbjct: 38  ------LLREIEILKKL-----NHPNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKENE 86

Query: 138 RYMEVG-AAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEG 196
             +       ++ QI EGL  LH   I+HRDLKPEN L   D ++  +K+ DFGLS +  
Sbjct: 87  GKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILL--DSDNGKVKLADFGLSKLLT 144

Query: 197 YTDPVVGLF-GSIDYVSPEALLQDR-ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQ 254
               ++    G+  Y++PE LL     + KSD+WSLGVILY L                 
Sbjct: 145 SDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL----------------- 187

Query: 255 MIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHP 300
                                K LI  +L  DP +RPSA+E+L H 
Sbjct: 188 ------------------PELKDLIRKMLQKDPEKRPSAKEILEHL 215

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score =  167 bits (425), Expect = 2e-48
 Identities = 86/295 (29%), Positives = 136/295 (46%), Gaps = 57/295 (19%)

Query: 18  LGRGGFSVVRRGIKKTCGETNQV-AIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQ 76
           LG+G F  V    KK   +T ++ A+K L++                           K+
Sbjct: 1   LGKGSFGKVLLVRKK---DTGKLYAMKVLKK---------------------------KK 30

Query: 77  VSVSDALLT--NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIV 134
           +     +     E  ++ +I      HP ++ L+  ++ +  ++L+LE   GGELF  + 
Sbjct: 31  IIKRKEVEHTLTERNILSRI-----NHPFIVKLHYAFQTEEKLYLVLEYAPGGELFSHLS 85

Query: 135 AQERYMEVGAAAVIR----QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFG 190
            + R+ E       R    +I   L  LH   I++RDLKPEN L L+   D  +K+ DFG
Sbjct: 86  KEGRFSE----ERARFYAAEIVLALEYLHSLGIIYRDLKPENIL-LD--ADGHIKLTDFG 138

Query: 191 LSSVEGYTDPVVGLF-GSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSN 249
           L+            F G+ +Y++PE LL        D WSLGV+LY +L+G PPF A+  
Sbjct: 139 LAKELSSEGSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR 198

Query: 250 RQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR---PSAQELLNHPW 301
           ++  + I+     F E     +S  A+ LIS LL  DP +R     A+E+  HP+
Sbjct: 199 KEIYEKILKDPLRFPE----FLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPF 249

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score =  167 bits (425), Expect = 4e-48
 Identities = 92/327 (28%), Positives = 130/327 (39%), Gaps = 83/327 (25%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQ-VAIKTLRRIGSTTPYGFPGSRGSSSSSQI 68
           D+++   I+G G FS V    +K   ETN+  AIK L                     Q+
Sbjct: 1   DDFKFGKIIGEGSFSTVVLAKEK---ETNKEYAIKIL------------------DKRQL 39

Query: 69  GFFPTR--KQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSG 126
                +  K   V       E  V+ ++    + HP +I LY  ++D+  ++ +LE    
Sbjct: 40  ----IKEKKVKYV-----KIEKEVLTRL----NGHPGIIKLYYTFQDEENLYFVLEYAPN 86

Query: 127 GELFDRI-------VAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDR 179
           GEL   I           R+          +I   L  LH   I+HRDLKPEN L     
Sbjct: 87  GELLQYIRKYGSLDEKCTRF-------YAAEILLALEYLHSKGIIHRDLKPENILL---D 136

Query: 180 EDSPLKIMDFGLSSVEGYTDPVVGLF---------------------GSIDYVSPEALLQ 218
           +D  +KI DFG + V                                G+ +YVSPE L +
Sbjct: 137 KDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNE 196

Query: 219 DRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQL 278
                 SD+W+LG I+Y +L+G PPF   +     Q I+  E+SF      N    AK L
Sbjct: 197 KPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKLEYSFPP----NFPPDAKDL 252

Query: 279 ISSLLTVDPNRRP----SAQELLNHPW 301
           I  LL +DP  R        EL  HP+
Sbjct: 253 IEKLLVLDPQDRLGVNEGYDELKAHPF 279

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score =  159 bits (405), Expect = 3e-45
 Identities = 74/230 (32%), Positives = 113/230 (49%), Gaps = 20/230 (8%)

Query: 85  TNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYM-EVG 143
            +++L  R I+      P V+ LY  ++ +  ++L++E   GG+L   ++     + E  
Sbjct: 37  VDQVLTERDILSQAQ-SPYVVKLYYSFQGKKNLYLVMEYLPGGDLA-SLLENVGSLDEDV 94

Query: 144 AAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV--------- 194
           A   I +I   L  LH   I+HRDLKP+N L  ++     LK+ DFGLS V         
Sbjct: 95  ARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSN---GHLKLTDFGLSKVGLVRRQINL 151

Query: 195 EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQ 254
                    + G+ DY++PE +L    +   D WSLG ILY  L G PPF  ++  +  Q
Sbjct: 152 NDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQ 211

Query: 255 MIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRP---SAQELLNHPW 301
            I+ G+  + E     +S  A  LIS LL  DP +R    S +E+ NHP+
Sbjct: 212 NILNGKIEWPED--VEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPF 259

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score =  149 bits (380), Expect = 9e-42
 Identities = 84/300 (28%), Positives = 138/300 (46%), Gaps = 56/300 (18%)

Query: 12  YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFF 71
           YE+   +G+G F  V    +K+ G+     +K +                 S+ S+    
Sbjct: 2   YEIIKQIGKGSFGKVYLVRRKSDGK--LYVLKEID---------------LSNMSEK--- 41

Query: 72  PTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFD 131
                    DAL  NE+ +++K+      HPN+I  Y+ +E++  + +++E   GG+L  
Sbjct: 42  ------EREDAL--NEVKILKKL-----NHPNIIKYYESFEEKGKLCIVMEYADGGDLSQ 88

Query: 132 RIVAQE---RYM---EVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLK 185
           +I  Q+   +     ++       Q+   L  LH   I+HRD+KP+N +FL       +K
Sbjct: 89  KIKKQKKEGKPFPEEQILD--WFVQLCLALKYLHSRKILHRDIKPQN-IFLTSNGL--VK 143

Query: 186 IMDFGLSSVEGYTDPVVGLF-GSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF 244
           + DFG+S V   T  +     G+  Y+SPE         KSD+WSLG +LY L +   PF
Sbjct: 144 LGDFGISKVLSSTVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPF 203

Query: 245 IAQSNRQKQQMIMAGEF----SFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHP 300
             ++  +    I+ G++    S Y       SS  + L+SSLL  DP  RPS  ++L  P
Sbjct: 204 EGENLLELALKILKGQYPPIPSQY-------SSELRNLVSSLLQKDPEERPSIAQILQSP 256

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score =  148 bits (377), Expect = 2e-41
 Identities = 80/306 (26%), Positives = 130/306 (42%), Gaps = 60/306 (19%)

Query: 11  EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGF 70
           E+   ++LGRG F  V   + K  GE   +A+K++            G       +    
Sbjct: 1   EWTRGELLGRGSFGSVYLALDKDTGEL--MAVKSVE---------LSGDSEEELEA---- 45

Query: 71  FPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVY--EDQNGVHLILELCSGGE 128
                        L  EI ++  +      HPN++  Y     E++N +++ LE  SGG 
Sbjct: 46  -------------LEREIRILSSL-----QHPNIVRYYGSERDEEKNTLNIFLEYVSGGS 87

Query: 129 LFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMD 188
           L   +    +  E       RQI EGLA LH   IVHRD+K  N L  +D     +K+ D
Sbjct: 88  LSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGV---VKLAD 144

Query: 189 FGLSSVEG---YTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFI 245
           FG +   G     +    + G+  +++PE +  +     +D+WSLG  +  + +G PP+ 
Sbjct: 145 FGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPW- 203

Query: 246 AQSNRQKQQM-----IMAG----EFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
              +     M     I +     E        +++S  AK  +   L  DP +RP+A EL
Sbjct: 204 ---SELGNPMAALYKIGSSGEPPEIP------EHLSEEAKDFLRKCLRRDPKKRPTADEL 254

Query: 297 LNHPWV 302
           L HP++
Sbjct: 255 LQHPFL 260

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score =  145 bits (368), Expect = 4e-40
 Identities = 83/298 (27%), Positives = 126/298 (42%), Gaps = 44/298 (14%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
            + E   +LG+G   VV +   K  G+    A+K +   G                    
Sbjct: 1   SDLERVKVLGQGSSGVVYKVRHKPTGKI--YALKKIHVDGDEE----------------- 41

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
               RKQ       L  E+  +R         P V+  Y  +  +  + ++LE   GG L
Sbjct: 42  ---FRKQ-------LLRELKTLRS-----CESPYVVKCYGAFYKEGEISIVLEYMDGGSL 86

Query: 130 FDRIVAQERYMEVGAAAVIRQIAEGLAALHQ-ANIVHRDLKPENCLFLNDREDSPLKIMD 188
            D +    +  E   A + RQI +GL  LH   +I+HRD+KP N L +N + +  +KI D
Sbjct: 87  ADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLL-INSKGE--VKIAD 143

Query: 189 FGLSSV-EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQ 247
           FG+S V E   D      G++ Y+SPE +  +  +  +D+WSLG+ L     G  PF   
Sbjct: 144 FGISKVLENTLDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPF--L 201

Query: 248 SNRQKQQMIMAGEFSF---YEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
              Q     +              +  S   +  IS+ L  DP +RPSA ELL HP++
Sbjct: 202 PPGQPSFFELMQAICDGPPPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFI 259

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score =  143 bits (362), Expect = 7e-39
 Identities = 96/304 (31%), Positives = 148/304 (48%), Gaps = 60/304 (19%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
           D++E    LG G F  V     K  G+    A+K L                  S ++I 
Sbjct: 1   DDFEFIKTLGTGSFGRVMLVRHKGSGKY--YALKIL------------------SKAKI- 39

Query: 70  FFPTR-KQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
               + KQV      + NE    ++I++++  HP +++LY  ++D + ++L++E   GGE
Sbjct: 40  ---VKLKQV----EHVLNE----KRILQSIR-HPFLVNLYGSFQDDSNLYLVMEYVPGGE 87

Query: 129 LFDRIVAQERYMEVGA---AAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLK 185
           LF  +    R+ E  A   AA   Q+   L  LH  +IV+RDLKPEN L   D +   +K
Sbjct: 88  LFSHLRKSGRFPEPVARFYAA---QVVLALEYLHSLDIVYRDLKPENLLL--DSDGY-IK 141

Query: 186 IMDFGLSS-VEG--YTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYP 242
           I DFG +  V+G  YT     L G+ +Y++PE +L        D W+LG+++Y +L+GYP
Sbjct: 142 ITDFGFAKRVKGRTYT-----LCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYP 196

Query: 243 PFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR-----PSAQELL 297
           PF   +  Q  + I+ G+  F        S  AK LI +LL VD  +R         ++ 
Sbjct: 197 PFFDDNPIQIYEKILEGKVRFP----SFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIK 252

Query: 298 NHPW 301
           NHPW
Sbjct: 253 NHPW 256

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score =  141 bits (357), Expect = 1e-38
 Identities = 77/297 (25%), Positives = 135/297 (45%), Gaps = 48/297 (16%)

Query: 11  EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGF 70
            Y++ D++GRG F VV +G+    G+   VAIK +                         
Sbjct: 1   NYQLGDLIGRGAFGVVYKGLNLETGDF--VAIKQISLEK--------------------- 37

Query: 71  FPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELF 130
               K+ ++    +  EI +++ +      HPN++      E  + +++ILE    G L 
Sbjct: 38  ---IKEEALKS--IMQEIDLLKNL-----KHPNIVKYIGSIETSDSLYIILEYAENGSLR 87

Query: 131 DRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFG 190
             I     + E   A  + Q+ +GLA LH+  ++HRD+K  N L     +D  +K+ DFG
Sbjct: 88  QIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILT---TKDGVVKLADFG 144

Query: 191 LSS-VEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSN 249
           +++ +   +     + G+  +++PE +     ++ SD+WSLG  +  LL+G PP+    +
Sbjct: 145 VATKLNDVSKDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPY---YD 201

Query: 250 RQKQQMIMAGEFSFYEQTW----KNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
                  MA  F   +       + IS   K  +      DPN RP+A++LL HPW+
Sbjct: 202 LNP----MAALFRIVQDDHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI 254

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score =  144 bits (362), Expect = 3e-38
 Identities = 87/313 (27%), Positives = 133/313 (42%), Gaps = 58/313 (18%)

Query: 11  EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGF 70
            Y +   LG G F  V     +       VA+K L                         
Sbjct: 1   SYRILRKLGEGSFGEVYLARDRK-----LVALKVLA------------------------ 31

Query: 71  FPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELF 130
               +  S        EI    +I+ +++  PN++ LYD ++D+  ++L++E   GG L 
Sbjct: 32  -KKLESKSKEVERFLREI----QILASLNHPPNIVKLYDFFQDEGSLYLVMEYVDGGSLE 86

Query: 131 DRI---VAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIM 187
           D +     +    E  A  ++ QI   L  LH   I+HRD+KPEN L   DR+   +K++
Sbjct: 87  DLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILL--DRDGRVVKLI 144

Query: 188 DFGLSSV---EGYTDPVVGLF----GSIDYVSPEALLQ---DRITSKSDMWSLGVILYIL 237
           DFGL+ +    G T  +  L     G+  Y++PE LL       +S SD+WSLG+ LY L
Sbjct: 145 DFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYEL 204

Query: 238 LSGYPPFIAQSNRQKQ----QMIMAGEFSFYEQTWK-----NISSSAKQLISSLLTVDPN 288
           L+G PPF  + N        ++I+                  IS +A  L+  LL  DP 
Sbjct: 205 LTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPK 264

Query: 289 RRPSAQELLNHPW 301
            R S+   L+H  
Sbjct: 265 NRLSSSSDLSHDL 277

Length = 384

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score =  140 bits (354), Expect = 3e-38
 Identities = 78/296 (26%), Positives = 134/296 (45%), Gaps = 48/296 (16%)

Query: 11  EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGF 70
            +E+ + +G+GGF  V +   K  G+   VAIK ++                    +I  
Sbjct: 1   LFEILEKIGKGGFGEVYKARHKRTGKE--VAIKVIK------------LESKEKKEKII- 45

Query: 71  FPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELF 130
                          NEI +++K       HPN++  Y  Y  ++ + +++E CSGG L 
Sbjct: 46  ---------------NEIQILKKC-----KHPNIVKYYGSYLKKDELWIVMEFCSGGSLK 85

Query: 131 DRI-VAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDF 189
           D +    +   E   A V +++ +GL  LH   I+HRD+K  N L  +D E   +K++DF
Sbjct: 86  DLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGE---VKLIDF 142

Query: 190 GLS---SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIA 246
           GLS   S     + +V   G+  +++PE +       K+D+WSLG+    L  G PP+ +
Sbjct: 143 GLSAQLSDTKARNTMV---GTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPY-S 198

Query: 247 QSNRQKQQMIMAGEFSFYE-QTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPW 301
           +    K  +           +  +  S   K  +   L  +P +RP+A++LL HP+
Sbjct: 199 ELPPMK-ALFKIATNGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF 253

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score =  140 bits (355), Expect = 5e-38
 Identities = 88/329 (26%), Positives = 134/329 (40%), Gaps = 86/329 (26%)

Query: 12  YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFF 71
           Y+V   LG G F  V     K  GE   VAIK +++                        
Sbjct: 1   YKVIKQLGDGTFGSVYLARNKETGEL--VAIKKMKK------------------------ 34

Query: 72  PTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFD 131
              K  S  + +   E+  +RK+    + HPN++ L +V+ + + ++ + E   G  L+ 
Sbjct: 35  ---KFYSWEECMNLREVKSLRKL----NEHPNIVKLKEVFRENDELYFVFEYMEG-NLYQ 86

Query: 132 RIVAQE-RYM-EVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDF 189
            +  ++ +   E    ++I QI +GLA +H+    HRDLKPEN L         +KI DF
Sbjct: 87  LMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEV---VKIADF 143

Query: 190 GLS----SVEGYTDPVVGLFGSIDYVS------PEALLQDR-ITSKSDMWSLGVILYILL 238
           GL+    S   YT          DYVS      PE LL+    +S  D+W+LG I+  L 
Sbjct: 144 GLAREIRSRPPYT----------DYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELY 193

Query: 239 SGYPPFIAQSNRQKQQMIMAGEFSFYEQTWK--------------------------NIS 272
           +  P F   S   +   I +   +  +Q W                           N S
Sbjct: 194 TLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNAS 253

Query: 273 SSAKQLISSLLTVDPNRRPSAQELLNHPW 301
             A  LI  +L  DP +RP+A + L HP+
Sbjct: 254 PEAIDLIKDMLRWDPKKRPTASQALQHPY 282

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score =  138 bits (351), Expect = 1e-37
 Identities = 87/308 (28%), Positives = 146/308 (47%), Gaps = 63/308 (20%)

Query: 11  EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGF 70
           +YEV + +G+G F  VR+  +K+ G+   +  K +     T                   
Sbjct: 1   DYEVLETIGKGSFGTVRKVRRKSDGKI--LVWKEIDYGNMTE------------------ 40

Query: 71  FPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYD--VYEDQNGVHLILELCSGGE 128
               KQ       L +E+ ++R++      HPN++  YD  +      +++++E C GG+
Sbjct: 41  --KEKQ------QLVSEVNILREL-----KHPNIVRYYDRIIDRSNQTLYIVMEYCEGGD 87

Query: 129 L---FDRIVAQERYMEVGAAAVIRQIAEGLAALH--------QANIVHRDLKPENCLFLN 177
           L     +   + +Y+E     + R + + L AL+           ++HRDLKP N +FL+
Sbjct: 88  LAQLIQKCKKERKYIE--EEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPAN-IFLD 144

Query: 178 DREDSPLKIMDFGLSSVEGYTDPVVGLF-GSIDYVSPEALLQDRITSKSDMWSLGVILYI 236
              +  +K+ DFGL+ + G+       + G+  Y+SPE L       KSD+WSLG ++Y 
Sbjct: 145 ANNN--VKLGDFGLAKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYE 202

Query: 237 LLSGYPPFIAQSNRQKQQMIMAGEFS----FYEQTWKNISSSAKQLISSLLTVDPNRRPS 292
           L +  PPF A++  Q    I  G+F      Y       SS   ++I S+L VDP++RPS
Sbjct: 203 LCALSPPFTARNQLQLASKIKEGKFRRIPYRY-------SSELNEVIKSMLNVDPDKRPS 255

Query: 293 AQELLNHP 300
            +ELL  P
Sbjct: 256 TEELLQLP 263

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score =  139 bits (352), Expect = 2e-37
 Identities = 88/336 (26%), Positives = 135/336 (40%), Gaps = 101/336 (30%)

Query: 12  YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFF 71
           YE  + LG G + VV +   K  GE   VA+K +R        G P +            
Sbjct: 1   YEKLEKLGEGTYGVVYKARDKKTGEI--VALKKIR--LDNEEEGIPST------------ 44

Query: 72  PTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCS------ 125
                     AL   EI +++++      HPN++ L DV   +  ++L+ E C       
Sbjct: 45  ----------AL--REISLLKEL-----KHPNIVKLLDVIHTERKLYLVFEYCDMDLKKY 87

Query: 126 ----GGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRED 181
                G L   ++  +  M         Q+  GLA  H   I+HRDLKP+N + +N    
Sbjct: 88  LDKRPGPLSPNLI--KSIM--------YQLLRGLAYCHSHRILHRDLKPQN-ILINRDGV 136

Query: 182 SPLKIMDFGLSSVEG-----YTDPVVGLFGSIDYVSPEALLQDRITSKS-DMWSLGVILY 235
             LK+ DFGL+   G     YT  VV L+    Y +PE LL  +  S + D+WS+G I  
Sbjct: 137 --LKLADFGLARAFGIPLRTYTHEVVTLW----YRAPEILLGSKHYSTAVDIWSVGCIFA 190

Query: 236 ILLSGYPPFIAQSNR-QKQQMIMAGEFSFY----EQTW---------------------- 268
            +++G P F   S   Q  ++     F       E++W                      
Sbjct: 191 EMITGKPLFPGDSEIDQLFKI-----FQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLE 245

Query: 269 ---KNISSSAKQLISSLLTVDPNRRPSAQELLNHPW 301
                +      L+S +L  +P +R SA+E L HP+
Sbjct: 246 KVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPY 281

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score =  128 bits (324), Expect = 6e-34
 Identities = 85/285 (29%), Positives = 133/285 (46%), Gaps = 40/285 (14%)

Query: 20  RGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSV 79
           +G F  V    K++ G+    AIK L++                 S  I     + QV  
Sbjct: 6   KGAFGSVYLAKKRSTGD--YFAIKVLKK-----------------SDMI----AKNQV-- 40

Query: 80  SDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERY 139
                TN +   R I+      P V  LY  ++ ++ ++L++E  +GG+    I      
Sbjct: 41  -----TN-VKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNGGDCASLIKTLGGL 94

Query: 140 MEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD 199
            E  A   I ++  G+  LHQ  I+HRD+KPEN L     +   LK+ DFGLS   G  +
Sbjct: 95  PEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLI---DQTGHLKLTDFGLSRN-GLEN 150

Query: 200 PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAG 259
                 G+ DY++PE +L       SD WSLG +++  L GYPPF A++       I++ 
Sbjct: 151 K--KFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSR 208

Query: 260 EFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSA---QELLNHPW 301
             ++ E+  +  S  A  LI+ LL +DP +R  A   QE+ +HP+
Sbjct: 209 RINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPF 253

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score =  128 bits (323), Expect = 1e-33
 Identities = 86/327 (26%), Positives = 134/327 (40%), Gaps = 82/327 (25%)

Query: 12  YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFF 71
           Y+    +G G + VV +   K  GE   VAIK ++                         
Sbjct: 1   YQKLGKIGEGTYGVVYKARDKLTGEI--VAIKKIKL------------------------ 34

Query: 72  PTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGG--EL 129
               +     AL   EI +++++      HPN+I L DV+  +  ++L+ E       +L
Sbjct: 35  RFESEGIPKTAL--REIKLLKEL-----NHPNIIKLLDVFRHKGDLYLVFEFMDTDLYKL 87

Query: 130 FD---RIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKI 186
                R + +         + + Q+ +GLA  H   I+HRDLKPEN L      +  LK+
Sbjct: 88  IKDRQRGLPESLIK-----SYLYQLLQGLAFCHSHGILHRDLKPENLLI---NTEGVLKL 139

Query: 187 MDFGL-----SSVEGYTDPVVGLFGSIDYVSPEALLQDRI-TSKSDMWSLGVILYILLSG 240
            DFGL     S V  YT  VV  +    Y +PE LL D+  ++  D+WS+G I   LLS 
Sbjct: 140 ADFGLARSFGSPVRPYTHYVVTRW----YRAPELLLGDKGYSTPVDIWSVGCIFAELLSR 195

Query: 241 YPPF-----IAQSNR---------QKQQMIMAGEFSFYEQTWK------------NISSS 274
            P F     I Q  +          +           Y+ ++             N S  
Sbjct: 196 RPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQ 255

Query: 275 AKQLISSLLTVDPNRRPSAQELLNHPW 301
           A  L+S +L  DP++R +A++ L HP+
Sbjct: 256 ALDLLSQMLHYDPHKRITAEQALAHPY 282

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score =  127 bits (321), Expect = 2e-33
 Identities = 80/289 (27%), Positives = 123/289 (42%), Gaps = 46/289 (15%)

Query: 16  DILGRGGFSVVRRGIKKTCGETN--QVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPT 73
             LG G F  V +G  K  G     +VA+KTL+                +S  QI     
Sbjct: 5   KKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLK--------------EDASEQQI----- 45

Query: 74  RKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRI 133
                        E  +MRK+      HPNV+ L  V  ++  +++++E   GG+L   +
Sbjct: 46  --------EEFLREARIMRKL-----DHPNVVKLLGVCTEEEPLYIVMEYMEGGDLLSYL 92

Query: 134 VAQERYMEVGA-AAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS 192
                 + +    +   QIA G+  L   N +HRDL   NCL   +     +KI DFGL 
Sbjct: 93  RKNRPKLSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLV---VKISDFGL- 148

Query: 193 SVEGYTDPVVGLFGS---IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQS 248
           S + Y D      G    I +++PE+L + + TSKSD+WS GV+L+ + + G  P+   S
Sbjct: 149 SRDLYDDDYYRKRGGKLPIRWMAPESLKEGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMS 208

Query: 249 NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELL 297
           N +  + +  G          N       L+      DP  RP+  EL+
Sbjct: 209 NEEVLEYLKNGYRLPQP---PNCPPELYDLMLQCWAEDPEDRPTFSELV 254

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score =  129 bits (327), Expect = 2e-33
 Identities = 83/323 (25%), Positives = 139/323 (43%), Gaps = 67/323 (20%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQV-AIKTLRRIGSTTPYGFPGSRGSSSSSQI 68
           D++EV  ++GRG F  V     K   +T QV A+K LR+                  +QI
Sbjct: 1   DDFEVIKVIGRGAFGEVWLVRDK---DTGQVYAMKVLRK------------SDMIKRNQI 45

Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
                 +           +IL         +  P ++ LY  ++D+  ++L++E   GG+
Sbjct: 46  AHVRAER-----------DILAD-------ADSPWIVKLYYSFQDEEHLYLVMEYMPGGD 87

Query: 129 LFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMD 188
           L + ++ ++ + E  A   I ++   L ++H+   +HRD+KP+N   L D  D  +K+ D
Sbjct: 88  LMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDN--ILIDA-DGHIKLAD 144

Query: 189 FGLS---------------SVEGYTDPVVGLF---------------GSIDYVSPEALLQ 218
           FGL                S        V +                G+ DY++PE L  
Sbjct: 145 FGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRG 204

Query: 219 DRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQL 278
                + D WSLGVILY +L G+PPF + + ++    I+  + S        +S  A  L
Sbjct: 205 TPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKESLRFPPDPPVSPEAIDL 264

Query: 279 ISSLLTVDPNRRPSAQELLNHPW 301
           I  LL    +R  S +E+ +HP+
Sbjct: 265 ICRLLCDPEDRLGSFEEIKSHPF 287

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score =  126 bits (319), Expect = 3e-33
 Identities = 80/290 (27%), Positives = 125/290 (43%), Gaps = 47/290 (16%)

Query: 18  LGRGGFSVVRRGIKKTCGETN--QVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRK 75
           LG G F  V +G  K  GE    +VA+KTL+              G+S   +  F     
Sbjct: 7   LGEGAFGEVYKGTLKGDGEGTETKVAVKTLKE-------------GASEEEREEFL---- 49

Query: 76  QVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA 135
                      E  +M+K+      HPN++ L  V      ++++ E   GG+L D +  
Sbjct: 50  ----------EEASIMKKL-----SHPNIVRLLGVCTQGEPLYIVTEYMPGGDLLDFLRK 94

Query: 136 QERYMEVGA-AAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV 194
               + +     +  QIA+G+  L   N VHRDL   NCL   +     +KI DFGLS  
Sbjct: 95  HGEKLTLKDLLQMALQIAKGMEYLESKNFVHRDLAARNCLVTENLV---VKISDFGLSRD 151

Query: 195 ---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNR 250
              + Y     G    I +++PE+L   + TSKSD+WS GV+L+ + + G  P+   SN 
Sbjct: 152 IYEDDYYRKRGGGKLPIKWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNE 211

Query: 251 QKQQMIMAGE-FSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH 299
           +  +++  G      E     +     +L+      DP  RP+  EL+  
Sbjct: 212 EVLELLEDGYRLPRPENCPDEL----YELMLQCWAYDPEDRPTFSELVED 257

Length = 258

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score =  126 bits (318), Expect = 5e-33
 Identities = 82/299 (27%), Positives = 126/299 (42%), Gaps = 54/299 (18%)

Query: 16  DILGRGGFSVVRRG-IKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTR 74
             LG G F  V +G +K   G+T +VA+KTL+                +S  +       
Sbjct: 1   KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLK--------------EDASEEER------ 40

Query: 75  KQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIV 134
                       E  VM+K+      HPNV+ L  V  ++  ++L+LE   GG+L D + 
Sbjct: 41  -------KDFLKEARVMKKL-----GHPNVVRLLGVCTEEEPLYLVLEYMEGGDLLDYLR 88

Query: 135 AQERYMEVGAAAVI---------RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLK 185
                      + +          QIA+G+  L     VHRDL   NCL   D     +K
Sbjct: 89  KSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLV---VK 145

Query: 186 IMDFGLS----SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-G 240
           I DFGLS      + Y     G    I +++PE+L     TSKSD+WS GV+L+ + + G
Sbjct: 146 ISDFGLSRDVYDDDYYRKKTGGKL-PIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLG 204

Query: 241 YPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH 299
             P+   SN +  + +  G      +  +       +L+ S   +DP  RP+  EL+  
Sbjct: 205 ATPYPGLSNEEVLEYLRKG--YRLPKP-EYCPDELYELMLSCWQLDPEDRPTFSELVER 260

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score =  125 bits (316), Expect = 1e-32
 Identities = 81/292 (27%), Positives = 128/292 (43%), Gaps = 49/292 (16%)

Query: 16  DILGRGGFSVVRRG--IKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPT 73
             LG G F  V +G    K  G+  +VA+KTL+                +S  QI     
Sbjct: 5   KKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLK--------------EDASEQQI----- 45

Query: 74  RKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRI 133
                        E  +MRK+      HPN++ L  V  ++  + +++E   GG+L D +
Sbjct: 46  --------EEFLREARIMRKL-----DHPNIVKLLGVCTEEEPLMIVMEYMPGGDLLDYL 92

Query: 134 VAQERYMEVGAAAVIR---QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFG 190
                  E+  + ++    QIA G+  L   N +HRDL   NCL   +     +KI DFG
Sbjct: 93  RKNRPK-ELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLV---VKISDFG 148

Query: 191 LSSVEGYTDPVVGLFGS---IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIA 246
           L S + Y D    + G    I +++PE+L + + TSKSD+WS GV+L+ + + G  P+  
Sbjct: 149 L-SRDLYDDDYYKVKGGKLPIRWMAPESLKEGKFTSKSDVWSFGVLLWEIFTLGEEPYPG 207

Query: 247 QSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN 298
            SN +  + +  G          N      +L+      DP  RP+  EL+ 
Sbjct: 208 MSNAEVLEYLKKGYRLPKP---PNCPPELYKLMLQCWAEDPEDRPTFSELVE 256

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score =  125 bits (316), Expect = 1e-32
 Identities = 66/226 (29%), Positives = 109/226 (48%), Gaps = 31/226 (13%)

Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           ++I+E  + HP ++ LY  ++D+  +++++E C GGEL+  +  +  + E  A   I  +
Sbjct: 44  KEILEECN-HPFIVKLYRTFKDKKYIYMLMEYCLGGELWTILRDRGLFDEYTARFYIACV 102

Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEG-----YTDPVVGLFG 206
                 LH   I++RDLKPEN L L+      +K++DFG +         +T       G
Sbjct: 103 VLAFEYLHNRGIIYRDLKPENLL-LDSN--GYVKLVDFGFAKKLKSGQKTWT-----FCG 154

Query: 207 SIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQM-----IMAG-E 260
           + +YV+PE +L        D WSLG++LY LL+G PPF       +  M     I+ G  
Sbjct: 155 TPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPF---GEDDEDPMEIYNDILKGNG 211

Query: 261 FSFYEQTWKNISSSAKQLISSLLTVDP-----NRRPSAQELLNHPW 301
              +      I  +AK LI  LL  +P     N +   +++  H W
Sbjct: 212 KLEFPN---YIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKW 254

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score =  123 bits (311), Expect = 8e-32
 Identities = 84/327 (25%), Positives = 130/327 (39%), Gaps = 79/327 (24%)

Query: 11  EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIK--TLRRIGSTTPYGFPGSRGSSSSSQI 68
            Y++   +G G   +V +   +  GET  VA+K   LRR+    P               
Sbjct: 1   RYKILGRIGEGAHGIVFKAKDRETGET--VALKKVALRRLEGGIPNQ------------- 45

Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
                             EI  ++        HP V+ L DV+   +G  L++E     +
Sbjct: 46  ---------------ALREIKALQAC-----QHPYVVKLLDVFPHGSGFVLVMEYM-PSD 84

Query: 129 LFDRIVAQER-YMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIM 187
           L + +  +ER   E    + +R + +G+A +H   I+HRDLKP N L      D  LKI 
Sbjct: 85  LSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLI---SADGVLKIA 141

Query: 188 DFGLSSVEG------YTDPVVGLFGSIDYVSPEALL-QDRITSKSDMWSLGVILYILLSG 240
           DFGL+ +        Y+  V   +    Y +PE L    +     D+W++G I   LL+G
Sbjct: 142 DFGLARLFSEEEPRLYSHQVATRW----YRAPELLYGARKYDPGVDLWAVGCIFAELLNG 197

Query: 241 YPPF-----IAQSNR---------QKQ-----QMIMAGEFSFYE---QTWKNI----SSS 274
            P F     I Q            ++       +    + +F E      + I    S  
Sbjct: 198 SPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPE 257

Query: 275 AKQLISSLLTVDPNRRPSAQELLNHPW 301
           A  L+  LL  DP++R SA E L HP+
Sbjct: 258 ALDLLKGLLVYDPSKRLSAAEALRHPY 284

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score =  122 bits (308), Expect = 1e-31
 Identities = 77/253 (30%), Positives = 127/253 (50%), Gaps = 30/253 (11%)

Query: 60  RGSSSSSQIGFFPTRKQVSVSDA------LLTNEILVMRKIVENVSPHPNVIDLYDVYED 113
           R +   S + +    K+V+++           NEI+++  +      HPN+I  Y+ + D
Sbjct: 20  RRTEDDSLVVW----KEVNLTRLSEKERRDALNEIVILSLL-----QHPNIIAYYNHFMD 70

Query: 114 QNGVHLILELCSGGELFDRIVAQER--YMEVGAAAVIRQIAEGLAALHQANIVHRDLKPE 171
            N + + +E  +GG L+D+IV Q+   + E      + QI   ++ +H+A I+HRD+K  
Sbjct: 71  DNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTL 130

Query: 172 NCLFLNDREDSPLKIMDFGLSSVEG----YTDPVVGLFGSIDYVSPEALLQDRITSKSDM 227
           N +FL   +   +K+ DFG+S + G      + VV   G+  Y+SPE     +   KSD+
Sbjct: 131 N-IFLT--KAGLIKLGDFGISKILGSEYSMAETVV---GTPYYMSPELCQGVKYNFKSDI 184

Query: 228 WSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDP 287
           W+LG +LY LL+    F A +       I+ G    Y       SS    L+ SLL  DP
Sbjct: 185 WALGCVLYELLTLKRTFDATNPLNLVVKIVQGN---YTPVVSVYSSELISLVHSLLQQDP 241

Query: 288 NRRPSAQELLNHP 300
            +RP+A E+L+ P
Sbjct: 242 EKRPTADEVLDQP 254

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score =  123 bits (310), Expect = 2e-31
 Identities = 88/324 (27%), Positives = 130/324 (40%), Gaps = 75/324 (23%)

Query: 12  YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFF 71
           YE    LG G ++VV +   K  G    VAIK ++           G R     ++ G  
Sbjct: 2   YEKGKKLGEGTYAVVYKARDKETGR--IVAIKKIK----------LGER---KEAKDGIN 46

Query: 72  PTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVY-EDQNGVHLILELCSG---G 127
            T        AL   EI +++++      HPN+I L DV+    N ++L+ E        
Sbjct: 47  FT--------AL--REIKLLQEL-----KHPNIIGLLDVFGHKSN-INLVFEFMETDLEK 90

Query: 128 ELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIM 187
            + D+ +           + +     GL  LH   I+HRDLKP N L  +D     LK+ 
Sbjct: 91  VIKDKSI---VLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGV---LKLA 144

Query: 188 DFGLSSVEG-----YTDPVVGLFGSIDYVSPEALLQDRI-TSKSDMWSLGVILYILLSGY 241
           DFGL+   G      T  VV  +    Y +PE L   R      DMWS+G I   LL   
Sbjct: 145 DFGLARSFGSPNRKMTHQVVTRW----YRAPELLFGARHYGVGVDMWSVGCIFAELLLRV 200

Query: 242 PPFIAQSNRQKQQMIMAG-------------------EFSFY-----EQTWKNISSSAKQ 277
           P     S+  +   I                      EF  +     +Q +   S  A  
Sbjct: 201 PFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALD 260

Query: 278 LISSLLTVDPNRRPSAQELLNHPW 301
           L+  LLT++PN+R +A++ L HP+
Sbjct: 261 LLQRLLTLNPNKRITARQALEHPY 284

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score =  120 bits (302), Expect = 1e-30
 Identities = 87/317 (27%), Positives = 144/317 (45%), Gaps = 57/317 (17%)

Query: 9   TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQI 68
            + Y+  + +G G    V +   +  G+  +VAIK +R                      
Sbjct: 18  RELYKNLEKIGEGASGEVYKATDRATGK--EVAIKKMR---------------------- 53

Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
                RKQ   +  L+ NEIL+M+        HPN++D YD Y   + + +++E   GG 
Sbjct: 54  ----LRKQ---NKELIINEILIMKD-----CKHPNIVDYYDSYLVGDELWVVMEYMDGGS 101

Query: 129 LFDRIVAQ--ERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKI 186
           L D I+ Q   R  E   A V R++ +GL  LH  N++HRD+K +N L   D     +K+
Sbjct: 102 LTD-IITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGS---VKL 157

Query: 187 MDFG----LSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYP 242
            DFG    L+  +   + VV   G+  +++PE + +     K D+WSLG++   +  G P
Sbjct: 158 ADFGFAAQLTKEKSKRNSVV---GTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEP 214

Query: 243 PFIAQSNRQKQQMIMAG---EFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH 299
           P++ +   +   +I            +  +  S   K  ++  L  DP +RPSA+ELL H
Sbjct: 215 PYLREPPLRALFLITTKGIPPL----KNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQH 270

Query: 300 PWVIGDSAKEEEMDAEI 316
           P  +  +  +EE    I
Sbjct: 271 P-FLKKACPKEEFAPLI 286

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score =  118 bits (297), Expect = 1e-29
 Identities = 87/304 (28%), Positives = 141/304 (46%), Gaps = 49/304 (16%)

Query: 7   KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSS 66
           KL+D +E+ + LG G F  VR    K  GE    AIK L++                   
Sbjct: 16  KLSD-FEMGETLGTGSFGRVRIAKHKGTGE--YYAIKCLKK------------------R 54

Query: 67  QIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSG 126
           +I      KQV          +   + I+  +S HP ++++   ++D+N V+ +LE   G
Sbjct: 55  EI---LKMKQV--------QHVAQEKSILMELS-HPFIVNMMCSFQDENRVYFLLEFVVG 102

Query: 127 GELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKI 186
           GELF  +    R+    A     ++      LH  +I++RDLKPEN L  N      +K+
Sbjct: 103 GELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNK---GHVKV 159

Query: 187 MDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFI 245
            DFG +  +   D    L G+ +Y++PE ++Q +   K+ D W++GV+LY  ++GYPPF 
Sbjct: 160 TDFGFA--KKVPDRTFTLCGTPEYLAPE-VIQSKGHGKAVDWWTMGVLLYEFIAGYPPFF 216

Query: 246 AQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR-----PSAQELLNHP 300
             +  +  + I+AG   F    W      A+ L+  LL  D  +R         ++ NHP
Sbjct: 217 DDTPFRIYEKILAGRLKF--PNW--FDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHP 272

Query: 301 WVIG 304
           +  G
Sbjct: 273 YFHG 276

Length = 329

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score =  118 bits (297), Expect = 2e-29
 Identities = 94/369 (25%), Positives = 139/369 (37%), Gaps = 112/369 (30%)

Query: 12  YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFF 71
           YE+   +G G + VV   + K  G   +VAIK +  +                     F 
Sbjct: 2   YELLKPIGSGAYGVVCSAVDKRTGR--KVAIKKISNV---------------------FD 38

Query: 72  PTRKQVSVSDALLT-NEILVMRKIVENVSPHPNVIDLYDV-----YEDQNGVHLILELCS 125
                  + DA     EI ++R +      H N+I L D+      ED N V+++ EL  
Sbjct: 39  ------DLIDAKRILREIKLLRHL-----RHENIIGLLDILRPPSPEDFNDVYIVTEL-- 85

Query: 126 GGELFDRIVAQERYMEVGAAAVIR---------------QIAEGLAALHQANIVHRDLKP 170
                         ME     VI+               QI  GL  LH AN++HRDLKP
Sbjct: 86  --------------METDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKP 131

Query: 171 ENCLFLNDREDSPLKIMDFGLS-SVEGYTDPVVGLFGSIDYV------SPEALLQDRITS 223
            N L +N   +  LKI DFGL+  V+   D    L    +YV      +PE LL     +
Sbjct: 132 SNIL-VN--SNCDLKICDFGLARGVDPDEDEKGFL---TEYVVTRWYRAPELLLSSSRYT 185

Query: 224 KS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIM------------------AGEF--- 261
           K+ D+WS+G I   LL+  P F  +    +  +I+                  A  +   
Sbjct: 186 KAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKS 245

Query: 262 -SFYE-QTW----KNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAKEEEMDAE 315
                 +         S  A  L+  +L  DP +R +A E L HP++      E+E  A+
Sbjct: 246 LPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDPEDEPVAK 305

Query: 316 IVSRLQSFN 324
                  F+
Sbjct: 306 PPFDFDFFD 314

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score =  118 bits (297), Expect = 2e-29
 Identities = 73/234 (31%), Positives = 116/234 (49%), Gaps = 18/234 (7%)

Query: 84  LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVG 143
           +  EI ++R +      HPNV+  +D+++    + ++LE   GG L    +A E+++   
Sbjct: 119 ICREIEILRDV-----NHPNVVKCHDMFDHNGEIQVLLEFMDGGSLEGTHIADEQFL--- 170

Query: 144 AAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYT-DPVV 202
            A V RQI  G+A LH+ +IVHRD+KP N L +N  ++  +KI DFG+S +   T DP  
Sbjct: 171 -ADVARQILSGIAYLHRRHIVHRDIKPSN-LLINSAKN--VKIADFGVSRILAQTMDPCN 226

Query: 203 GLFGSIDYVSPEALLQDRITSK-----SDMWSLGVILYILLSGYPPFIAQSNRQKQQMIM 257
              G+I Y+SPE +  D           D+WSLGV +     G  PF          ++ 
Sbjct: 227 SSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMC 286

Query: 258 AGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAKEEE 311
           A   S   +     S   +  IS  L  +P +R SA +LL HP+++     + +
Sbjct: 287 AICMSQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRAQPGQGQ 340

Length = 353

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score =  116 bits (292), Expect = 2e-29
 Identities = 71/233 (30%), Positives = 114/233 (48%), Gaps = 32/233 (13%)

Query: 86  NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAA 145
           +E+ V+  +      HPN++  Y V   +  V++ +E CSGG L + ++   R ++    
Sbjct: 48  DEMKVLELLK-----HPNLVKYYGVEVHREKVYIFMEYCSGGTLEE-LLEHGRILD---E 98

Query: 146 AVIR----QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEG----- 196
            VIR    Q+ EGLA LH   IVHRD+KP N +FL+      +K+ DFG +         
Sbjct: 99  HVIRVYTLQLLEGLAYLHSHGIVHRDIKPAN-IFLDHN--GVIKLGDFGCAVKLKNNTTT 155

Query: 197 YTDPVVGLFGSIDYVSPEALLQDRITSK---SDMWSLGVILYILLSGYPPFIAQSNRQKQ 253
             + V  L G+  Y++PE +   +       +D+WSLG ++  + +G  P+    N  + 
Sbjct: 156 MGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQ- 214

Query: 254 QMIM----AGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
             IM    AG       + + +S   K  +   L  DP +RP+A ELL HP+V
Sbjct: 215 --IMFHVGAGHKPPIPDSLQ-LSPEGKDFLDRCLESDPKKRPTASELLQHPFV 264

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score =  115 bits (289), Expect = 4e-29
 Identities = 77/294 (26%), Positives = 124/294 (42%), Gaps = 40/294 (13%)

Query: 11  EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGF 70
           +YE   ++GRG F +V    +K   +   V IK +                         
Sbjct: 1   KYEKIRVVGRGAFGIVHLCRRKA--DQKLVIIKQI------------------------- 33

Query: 71  FPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELF 130
            P  +          NE  V++ +      HPN+I+ Y+ + +   + +++E   GG L 
Sbjct: 34  -PVEQMTKDERLAAQNECQVLKLL-----SHPNIIEYYENFLEDKALMIVMEYAPGGTLA 87

Query: 131 DRIVAQERYM--EVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMD 188
           + I  +   +  E        QI   L  +H   I+HRDLK +N L   D+    +KI D
Sbjct: 88  EYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILL--DKHKMVVKIGD 145

Query: 189 FGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQS 248
           FG+S +         + G+  Y+SPE         KSD+W+LG +LY L S    F A +
Sbjct: 146 FGISKILSSKSKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAAN 205

Query: 249 NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
                  IM+G F+         S   +QLI S+L +DP++RP   +++  P  
Sbjct: 206 LPALVLKIMSGTFA---PISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQPIC 256

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score =  116 bits (292), Expect = 4e-29
 Identities = 84/329 (25%), Positives = 127/329 (38%), Gaps = 82/329 (24%)

Query: 12  YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFF 71
           YE    +G G +  V +      G    VA+K +R          P S      S +   
Sbjct: 1   YEELAEIGEGAYGTVYKARDLNTGRF--VALKKVR---------VPLSEEGIPLSTL--- 46

Query: 72  PTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDV-----YEDQNGVHLILELCSG 126
                          EI +++++      HPN++ L DV      + +  + L+ E    
Sbjct: 47  --------------REIALLKQL--ESFEHPNIVRLLDVCHGPRTDRELKLTLVFEHV-- 88

Query: 127 GELFDRIVAQ--ERYMEVGAAA-----VIRQIAEGLAALHQANIVHRDLKPENCLFLNDR 179
               D+ +A    +  + G        ++RQ+  G+  LH   IVHRDLKP+N L  +D 
Sbjct: 89  ----DQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDG 144

Query: 180 EDSPLKIMDFGLSSVEGY----TDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY 235
           +   +KI DFGL+ +  +    T  VV L+    Y +PE LLQ    +  DMWS+G I  
Sbjct: 145 Q---VKIADFGLARIYSFEMALTSVVVTLW----YRAPEVLLQSSYATPVDMWSVGCIFA 197

Query: 236 ILLSGYPPFIAQSNRQKQQMIM-------AGE-----------FSFYEQTWK-----NIS 272
            L    P F   S   +   I          E           F  Y           I 
Sbjct: 198 ELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEIC 257

Query: 273 SSAKQLISSLLTVDPNRRPSAQELLNHPW 301
                L+  +LT +P++R SA E L HP+
Sbjct: 258 EEGLDLLKKMLTFNPHKRISAFEALQHPY 286

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score =  114 bits (287), Expect = 8e-29
 Identities = 72/301 (23%), Positives = 125/301 (41%), Gaps = 55/301 (18%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQ-VAIKTLRRIGSTTPYGFPGSRGSSSSSQI 68
           + +++ + LG G +  V + I K   ET Q VAIK +                       
Sbjct: 3   EVFDILEKLGEGSYGSVYKAIHK---ETGQVVAIKVVPVEEDLQE--------------- 44

Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
                          +  EI ++++        P ++  Y  Y     + +++E C  G 
Sbjct: 45  ---------------IIKEISILKQ-----CDSPYIVKYYGSYFKNTDLWIVMEYCGAGS 84

Query: 129 LFDRIVAQERYM-EVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIM 187
           + D +    + + E   AA++ Q  +GL  LH    +HRD+K  N L LN  E+   K+ 
Sbjct: 85  VSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNIL-LN--EEGQAKLA 141

Query: 188 DFGLSSVEGYTDPVVG-LFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIA 246
           DFG+S     T      + G+  +++PE + +    +K+D+WSLG+    +  G PP+  
Sbjct: 142 DFGVSGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPY-- 199

Query: 247 QSN-RQKQQMIMAGEF---SFYEQT-WKNISSSAKQLISSLLTVDPNRRPSAQELLNHPW 301
            S+    + + M       +  +   W   S      +   L  DP  RPSA +LL HP+
Sbjct: 200 -SDIHPMRAIFMIPNKPPPTLSDPEKW---SPEFNDFVKKCLVKDPEERPSAIQLLQHPF 255

Query: 302 V 302
           +
Sbjct: 256 I 256

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score =  113 bits (284), Expect = 3e-28
 Identities = 81/302 (26%), Positives = 131/302 (43%), Gaps = 48/302 (15%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
           D+YE+ +++G G  +VV   I     E   VAIK +                        
Sbjct: 1   DDYELIEVIGVGATAVVYAAICLPNNEK--VAIKRIDL---------------------- 36

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
               + Q SV +  L  E+  M     +   HPNV+  Y  +   + + L++   SGG L
Sbjct: 37  ---EKCQTSVDE--LRKEVQAM-----SQCNHPNVVKYYTSFVVGDELWLVMPYLSGGSL 86

Query: 130 FD---RIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKI 186
            D       +    E   A V++++ +GL  LH    +HRD+K  N L     ED  +KI
Sbjct: 87  LDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILL---GEDGSVKI 143

Query: 187 MDFGLS-SVEGYTDPVVG----LFGSIDYVSPEALLQDR-ITSKSDMWSLGVILYILLSG 240
            DFG+S S+    D          G+  +++PE + Q      K+D+WS G+    L +G
Sbjct: 144 ADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATG 203

Query: 241 YPPFIAQSNRQKQQMIMAGEFSFYEQT--WKNISSSAKQLISSLLTVDPNRRPSAQELLN 298
             P+      +   + +  +    E    +K  S S +++IS  L  DP++RP+A+ELL 
Sbjct: 204 AAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263

Query: 299 HP 300
           H 
Sbjct: 264 HK 265

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score =  113 bits (285), Expect = 3e-28
 Identities = 71/221 (32%), Positives = 110/221 (49%), Gaps = 19/221 (8%)

Query: 86  NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAA 145
           NE  V++++      HP +I L+    DQ  +++++E   GGELF  +    R+      
Sbjct: 50  NEKRVLKEV-----SHPFIIRLFWTEHDQRFLYMLMEYVPGGELFSYLRNSGRFSNSTGL 104

Query: 146 AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF 205
               +I   L  LH   IV+RDLKPEN L   D+E   +K+ DFG +  +   D    L 
Sbjct: 105 FYASEIVCALEYLHSKEIVYRDLKPENILL--DKEGH-IKLTDFGFA--KKLRDRTWTLC 159

Query: 206 GSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYE 265
           G+ +Y++PE +         D W+LG+++Y +L GYPPF   +     + I+AG+  F  
Sbjct: 160 GTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLEFP- 218

Query: 266 QTWKNISSSAKQLISSLLTVDPNRR-----PSAQELLNHPW 301
              +++   AK LI  LL VD  RR       A ++ NH W
Sbjct: 219 ---RHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRW 256

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score =  112 bits (282), Expect = 7e-28
 Identities = 62/221 (28%), Positives = 111/221 (50%), Gaps = 11/221 (4%)

Query: 83  LLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEV 142
           LL NE+++MR        HPN++++Y  Y   + + +++E   GG L D IV   R  E 
Sbjct: 62  LLFNEVVIMRDY-----QHPNIVEMYSSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEE 115

Query: 143 GAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGL-SSVEGYTDPV 201
             A V   + + L+ LH   ++HRD+K ++ L      D  +K+ DFG  + V       
Sbjct: 116 QIATVCLAVLKALSFLHAQGVIHRDIKSDSILL---TSDGRVKLSDFGFCAQVSKEVPRR 172

Query: 202 VGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEF 261
             L G+  +++PE + +    ++ D+WSLG+++  ++ G PP+  +   Q  + I     
Sbjct: 173 KSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLP 232

Query: 262 SFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
              +     +S   +  +  +L  DP +R +A ELLNHP++
Sbjct: 233 PKLKNL-HKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFL 272

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score =  112 bits (283), Expect = 1e-27
 Identities = 75/218 (34%), Positives = 121/218 (55%), Gaps = 18/218 (8%)

Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           R I+E V  HP ++DL   ++    ++LILE  SGGELF  +  +  +ME  A   + +I
Sbjct: 51  RNILEAVK-HPFIVDLIYAFQTGGKLYLILEYLSGGELFMHLEREGIFMEDTACFYLSEI 109

Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF-GSIDY 210
           +  L  LHQ  I++RDLKPEN L L+ +    +K+ DFGL     +   V   F G+I+Y
Sbjct: 110 SLALEHLHQQGIIYRDLKPENIL-LDAQ--GHVKLTDFGLCKESIHEGTVTHTFCGTIEY 166

Query: 211 VSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSF--YEQTW 268
           ++PE L++       D WSLG ++Y +L+G PPF A++ ++    I+ G+ +   Y    
Sbjct: 167 MAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLNLPPY---- 222

Query: 269 KNISSSAKQLISSLLTVDPNRR----PS-AQELLNHPW 301
             ++  A+ L+  LL  +P+ R    P  A E+ +HP+
Sbjct: 223 --LTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPF 258

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score =  110 bits (277), Expect = 3e-27
 Identities = 81/324 (25%), Positives = 140/324 (43%), Gaps = 77/324 (23%)

Query: 12  YEVTDILGRGGFSVVRRGIKKTCGETNQ-VAIKTLRRIGSTTPYGFPGSRGSSSSSQIGF 70
           Y++   +G G FS V   +K    +T +  AIK +++                       
Sbjct: 1   YKILGKIGEGTFSEV---LKAQSRKTGKYYAIKCMKK----------------------- 34

Query: 71  FPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDV-YEDQNG-VHLILELCSGGE 128
                  S+       EI  +R+    +SPHPN++ L +V ++ + G + L+ EL     
Sbjct: 35  ----HFKSLEQVNNLREIQALRR----LSPHPNILRLIEVLFDRKTGRLALVFELMDM-N 85

Query: 129 LFDRIVAQERYM-EVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIM 187
           L++ I  ++R + E    + + Q+ + L  +H+  I HRD+KPEN L  +D     LK+ 
Sbjct: 86  LYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKDDI----LKLA 141

Query: 188 DFG----LSSVEGYTDPVVGLFGSIDYVSPEALLQD-RITSKSDMWSLGVILYILLSGYP 242
           DFG    + S   YT+ +   +    Y +PE LL D     K D+W++G + + +LS +P
Sbjct: 142 DFGSCRGIYSKPPYTEYISTRW----YRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFP 197

Query: 243 PF-----IAQSNR---------------QKQQMIMAGEFSFYEQTW-----KNISSSAKQ 277
            F     + Q  +                ++   M   F   + T       N S+    
Sbjct: 198 LFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLD 257

Query: 278 LISSLLTVDPNRRPSAQELLNHPW 301
           L+  LL  DP+ R +A++ L HP+
Sbjct: 258 LLKKLLAYDPDERITAKQALRHPY 281

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score =  110 bits (277), Expect = 4e-27
 Identities = 86/333 (25%), Positives = 130/333 (39%), Gaps = 90/333 (27%)

Query: 12  YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFF 71
           YE    +G G +  V +   K  GE   VA+K +R        GFP              
Sbjct: 1   YEKIAQIGEGTYGQVYKARNKKTGEL--VALKKIR--MENEKEGFP-------------- 42

Query: 72  PTRKQVSVSDALLTNEILVMR--KIVENVSPHPNVIDLYDVY--EDQNGVHLILELC--- 124
                           I  +R  K+++ +  HPN++ L ++   + +  ++++ E     
Sbjct: 43  ----------------ITAIREIKLLQKLR-HPNIVRLKEIVTSKGKGSIYMVFEYMDHD 85

Query: 125 -SGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSP 183
            +G  L D    + ++ E      ++Q+ EGL  LH   I+HRD+K  N L  ND     
Sbjct: 86  LTG--LLDS--PEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGV--- 138

Query: 184 LKIMDFGL------SSVEGYTDPVVGLFGSIDYVSPEALL-QDRITSKSDMWSLGVILYI 236
           LK+ DFGL       +   YT+ V+ L+    Y  PE LL   R   + DMWS+G IL  
Sbjct: 139 LKLADFGLARPYTKRNSADYTNRVITLW----YRPPELLLGATRYGPEVDMWSVGCILAE 194

Query: 237 LLSGYPPFIAQSNRQKQ--------------------QMIMAGEFS--------FYEQTW 268
           L  G P F   S   +Q                    ++                 E   
Sbjct: 195 LFLGKPIF-QGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFK 253

Query: 269 KNISSSAKQLISSLLTVDPNRRPSAQELLNHPW 301
             I  SA  L+  LLT+DP +R SA + L H +
Sbjct: 254 HLIDPSALDLLDKLLTLDPKKRISADQALQHEY 286

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score =  110 bits (276), Expect = 4e-27
 Identities = 71/239 (29%), Positives = 114/239 (47%), Gaps = 18/239 (7%)

Query: 74  RKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRI 133
           +K   V  A         R+++E V   P ++ L+  ++    +HLIL+  +GGELF  +
Sbjct: 37  KKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLHLILDYVNGGELFTHL 96

Query: 134 VAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS 193
             +E + E      I +I   L  LHQ  I++RD+K EN L      +  + + DFGLS 
Sbjct: 97  YQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILL---DSEGHVVLTDFGLSK 153

Query: 194 --VEGYTDPVVGLFGSIDYVSPEALLQ-DRITSKS-DMWSLGVILYILLSGYPPFIAQSN 249
             +    +      G+I+Y++PE +        K+ D WSLGV+ + LL+G  PF     
Sbjct: 154 EFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGE 213

Query: 250 RQKQ----QMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR---PSAQELLNHPW 301
           +  Q    + I+  +  F     K +S+ A+  I  LL  DP +R     A E+ NHP+
Sbjct: 214 QNSQSEISRRILKSKPPFP----KTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPF 268

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score =  109 bits (274), Expect = 5e-27
 Identities = 61/219 (27%), Positives = 107/219 (48%), Gaps = 7/219 (3%)

Query: 85  TNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGA 144
              +L  R+I++ ++ HP +++L+  ++D+  ++L+++L  GG+L   +  + ++ E   
Sbjct: 44  VRNVLNERRILQELN-HPFLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQKVKFSEEQV 102

Query: 145 AAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGL 204
              I +I   L  LH   I+HRD+KP+N L     E   + I DF +++           
Sbjct: 103 KFWICEIVLALEYLHSKGIIHRDIKPDNILL---DEQGHVHITDFNIATKVTPDTLTTST 159

Query: 205 FGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFY 264
            G+  Y++PE L +   +   D WSLGV  Y  L G  P+   S   + Q I A + +  
Sbjct: 160 SGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQ-IRAKQETAD 218

Query: 265 EQTWKNISSSAKQLISSLLTVDPNRRPS--AQELLNHPW 301
                  S+ A   I+ LL  DP +R     ++L NHP+
Sbjct: 219 VLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPY 257

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score =  109 bits (273), Expect = 6e-27
 Identities = 65/223 (29%), Positives = 108/223 (48%), Gaps = 20/223 (8%)

Query: 86  NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAA 145
           NEI ++  +      HPN+I   + + D N + +++E    G+L   I  +++  ++   
Sbjct: 48  NEIRILASV-----NHPNIISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPE 102

Query: 146 AVIR----QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV--EGYTD 199
             I     Q+  GL ALH+  I+HRDLK  N + L   +   +KI D G+S V  +    
Sbjct: 103 QEIWRIFIQLLRGLQALHEQKILHRDLKSAN-ILLVANDL--VKIGDLGISKVLKKNMAK 159

Query: 200 PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAG 259
             +G   +  Y++PE       + KSD+WSLG +LY + +  PPF A+S +  +  +  G
Sbjct: 160 TQIG---TPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRG 216

Query: 260 EFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
           +   Y       S   +  I S+L V P  RP+  ++L  P V
Sbjct: 217 K---YPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASPAV 256

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score =  110 bits (277), Expect = 1e-26
 Identities = 89/331 (26%), Positives = 141/331 (42%), Gaps = 79/331 (23%)

Query: 18  LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQ-IGFFPTRKQ 76
           LG G +  V +      G+   VAIK ++ I          S   +   Q +G       
Sbjct: 17  LGEGTYGKVEKAYDTLTGK--IVAIKKVKII--------EISNDVTKDRQLVG------M 60

Query: 77  VSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSG--GELFDRIV 134
             +    L  E+ +M +I      H N++ L DVY + + ++L++++ +    ++ DR +
Sbjct: 61  CGIHFTTL-RELKIMNEI-----KHENIMGLVDVYVEGDFINLVMDIMASDLKKVVDRKI 114

Query: 135 AQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV 194
              R  E     ++ QI  GL  LH+   +HRDL P N +F+N +     KI DFGL+  
Sbjct: 115 ---RLTESQVKCILLQILNGLNVLHKWYFMHRDLSPAN-IFINSK--GICKIADFGLARR 168

Query: 195 EGY-------------------TDPVVGLFGSIDYVSPEALL-QDRITSKSDMWSLGVIL 234
            GY                   T  VV L+    Y +PE L+  ++     DMWS+G I 
Sbjct: 169 YGYPPYSDTLSKDETMQRREEMTSKVVTLW----YRAPELLMGAEKYHFAVDMWSVGCIF 224

Query: 235 YILLSGYPPF-----IAQSNR--------------QKQQMIMAGEFSF-----YEQTWKN 270
             LL+G P F     I Q  R              Q +++ +  EF+       +  + N
Sbjct: 225 AELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPN 284

Query: 271 ISSSAKQLISSLLTVDPNRRPSAQELLNHPW 301
            S  A  L+ SLL ++P  R SA+E L H +
Sbjct: 285 ASDDAIDLLQSLLKLNPLERISAKEALKHEY 315

Length = 335

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score =  109 bits (275), Expect = 1e-26
 Identities = 71/239 (29%), Positives = 105/239 (43%), Gaps = 45/239 (18%)

Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIR-QIAEGLAA-- 157
           HP +  LY  ++ +  + L+++ C GGELF   + Q +  +  +  V R   AE L A  
Sbjct: 60  HPFLPTLYASFQTETYLCLVMDYCPGGELFR--LLQRQPGKCLSEEVARFYAAEVLLALE 117

Query: 158 -LHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS---------------------SVE 195
            LH   IV+RDLKPEN L     E   + + DF LS                     SV 
Sbjct: 118 YLHLLGIVYRDLKPENILL---HESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVN 174

Query: 196 GYTDPVV---------GLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIA 246
                              G+ +Y++PE +  D   S  D W+LG++LY +L G  PF  
Sbjct: 175 SIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKG 234

Query: 247 QSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR----PSAQELLNHPW 301
            +  +    I+  E +F       +SSSA+ LI  LL  DP++R      A E+  HP+
Sbjct: 235 SNRDETFSNILKKEVTFPGSP--PVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPF 291

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score =  108 bits (271), Expect = 2e-26
 Identities = 72/241 (29%), Positives = 120/241 (49%), Gaps = 20/241 (8%)

Query: 74  RKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRI 133
           +K   V  A  T      R+++E++   P ++ L+  ++    +HLIL+  +GGELF  +
Sbjct: 37  KKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLHLILDYINGGELFTHL 96

Query: 134 VAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS 193
             +ER+ E        +I   L  LH+  I++RD+K EN L      +  + + DFGLS 
Sbjct: 97  SQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILL---DSNGHVVLTDFGLSK 153

Query: 194 --VEGYTDPVVGLFGSIDYVSPEALL-QDRITSKS-DMWSLGVILYILLSGYPPFIAQSN 249
              E   +      G+I+Y++P+ +   D    K+ D WS+GV++Y LL+G  PF     
Sbjct: 154 EFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGE 213

Query: 250 RQKQ----QMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR----PS-AQELLNHP 300
           +  Q    + I+  E  +     + +S+ AK +I  LL  DP +R    PS A E+  HP
Sbjct: 214 KNSQAEISRRILKSEPPYP----QEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHP 269

Query: 301 W 301
           +
Sbjct: 270 F 270

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score =  107 bits (270), Expect = 5e-26
 Identities = 85/327 (25%), Positives = 139/327 (42%), Gaps = 78/327 (23%)

Query: 11  EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGF 70
           E+E  + +G G + +V R    T GE   VA+K +R             R     S +  
Sbjct: 8   EFEKLNRIGEGTYGIVYRARDTTSGE--IVALKKVR---------MDNERDGIPISSL-- 54

Query: 71  FPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQ--NGVHLILELCSG-- 126
                           EI ++  +      HPN+++L +V   +  + + L++E C    
Sbjct: 55  ---------------REITLLLNL-----RHPNIVELKEVVVGKHLDSIFLVMEYCEQDL 94

Query: 127 GELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKI 186
             L D +     + E     ++ Q+  GL  LH+  I+HRDLK  N L L D+    LKI
Sbjct: 95  ASLLDNM--PTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSN-LLLTDK--GCLKI 149

Query: 187 MDFGLSSVEG-----YTDPVVGLFGSIDYVSPEALLQDRITSKS-DMWSLGVILYILLSG 240
            DFGL+   G      T  VV L+    Y +PE LL     + + DMW++G IL  LL+ 
Sbjct: 150 ADFGLARTYGLPAKPMTPKVVTLW----YRAPELLLGCTTYTTAIDMWAVGCILAELLAH 205

Query: 241 YPPFIAQSNRQKQQMI-------------------MAGEFSFYEQTWKN-------ISSS 274
            P    +S  ++  +I                   + G+F+  +Q + N       +S +
Sbjct: 206 KPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEA 265

Query: 275 AKQLISSLLTVDPNRRPSAQELLNHPW 301
             +L++ LL  DP +R +A+E L   +
Sbjct: 266 GLRLLNFLLMYDPKKRATAEEALESSY 292

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score =  107 bits (268), Expect = 7e-26
 Identities = 74/232 (31%), Positives = 119/232 (51%), Gaps = 13/232 (5%)

Query: 74  RKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRI 133
           RK   VS + +T+  L  R ++  V+  P ++ L   ++    ++L+L   +GGELF  +
Sbjct: 27  RKAHIVSRSEVTH-TLAERTVLAQVN-CPFIVPLKFSFQSPEKLYLVLAFINGGELFHHL 84

Query: 134 VAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS 193
             + R+    A     ++   L  LH+ N+++RDLKPEN L   D +   + + DFGL  
Sbjct: 85  QREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILL--DYQGH-IALCDFGLCK 141

Query: 194 VEGYTDPVVGLF-GSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQK 252
           +    D     F G+ +Y++PE LL    T   D W+LGV+LY +L+G PPF  ++  + 
Sbjct: 142 LNMKDDDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEM 201

Query: 253 QQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR---PSAQELLNHPW 301
            + I+     F +         AK L+  LL+ DP RR     AQE+ NHP+
Sbjct: 202 YRKILQEPLRFPD----GFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPF 249

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score =  107 bits (269), Expect = 9e-26
 Identities = 79/227 (34%), Positives = 118/227 (51%), Gaps = 27/227 (11%)

Query: 86  NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERY-MEVGA 144
           + +   RKI+ N   HP  ++LY  ++D++ ++L+LE   GGE F  +   +R+  +VG 
Sbjct: 76  DHVFSERKIL-NYINHPFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRRNKRFPNDVGC 134

Query: 145 --AAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV---EGYTD 199
             AA I  I E L +L   NIV+RDLKPEN L     +D  +K+ DFG + V     YT 
Sbjct: 135 FYAAQIVLIFEYLQSL---NIVYRDLKPENLLL---DKDGFIKMTDFGFAKVVDTRTYT- 187

Query: 200 PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAG 259
               L G+ +Y++PE LL       +D W+LG+ +Y +L G PPF A       Q I+ G
Sbjct: 188 ----LCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEG 243

Query: 260 EFSFYEQTWKNISSSAKQLISSLLTVDPNRR-----PSAQELLNHPW 301
              F     K + ++ K L+  LL+ D  +R       AQ +  HPW
Sbjct: 244 IIYFP----KFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPW 286

Length = 340

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score =  107 bits (268), Expect = 1e-25
 Identities = 64/206 (31%), Positives = 105/206 (50%), Gaps = 12/206 (5%)

Query: 102 PNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQA 161
           P ++ L   ++  + ++L+ +  SGGELF  +  + R+ E  A   I ++   L  LH+ 
Sbjct: 56  PFIVGLKFSFQTDSDLYLVTDYMSGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKY 115

Query: 162 NIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF-GSIDYVSPEALLQDR 220
           +IV+RDLKPEN L         + + DFGLS      +     F G+ +Y++PE LL ++
Sbjct: 116 DIVYRDLKPENILL---DATGHIALCDFGLSKANLTDNKTTNTFCGTTEYLAPEVLLDEK 172

Query: 221 -ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLI 279
             T   D WSLGV+++ +  G+ PF A+  +Q  + I  G+  F +     +S   +Q +
Sbjct: 173 GYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPKNV---LSDEGRQFV 229

Query: 280 SSLLTVDPNRR----PSAQELLNHPW 301
             LL  +P  R      A EL  HP+
Sbjct: 230 KGLLNRNPQHRLGAHRDAVELKEHPF 255

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score =  105 bits (264), Expect = 2e-25
 Identities = 73/226 (32%), Positives = 113/226 (50%), Gaps = 17/226 (7%)

Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYM-EVGAAAVIRQIAEGLAALH 159
           HPN++ LY+ Y  +N + +++E C GG L   ++  ER + E     V RQ+ E L  LH
Sbjct: 61  HPNIVGLYEAYFYENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLH 120

Query: 160 QANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF-GSIDYVSPEALL- 217
              ++HRDLK  N L   D +   +K+ DFG+S+    T      F G+  +++PE +  
Sbjct: 121 SHKVIHRDLKAGNILLTLDGD---VKLADFGVSAKNKSTLQKRDTFIGTPYWMAPEVVAC 177

Query: 218 ----QDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQT--WKNI 271
                +    K+D+WSLG+ L  L    PP    +  +    I+  E    +Q   W   
Sbjct: 178 ETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPPTLDQPSKW--- 234

Query: 272 SSSAKQLISSLLTVDPNRRPSAQELLNHPWV--IGDSAKEEEMDAE 315
           SSS    + S L  DP+ RP+A ELL HP+V    D+   +++ AE
Sbjct: 235 SSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQSDNKAIKDLLAE 280

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score =  104 bits (261), Expect = 2e-25
 Identities = 69/232 (29%), Positives = 111/232 (47%), Gaps = 14/232 (6%)

Query: 75  KQVSVS--DALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDR 132
           KQ+ +S  +     E +   +++  +     +I  Y+ + D+  +++++E    G+L   
Sbjct: 31  KQIDLSKMNRREREEAIDEARVLAKLD-SSYIIRYYESFLDKGKLNIVMEYAENGDLHKL 89

Query: 133 IVAQ--ERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFG 190
           +  Q      E        QI  GLA LH   I+HRD+K  N LFL+      +KI D G
Sbjct: 90  LKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLN-LFLD--AYDNVKIGDLG 146

Query: 191 LSSVEG-YTDPVVGLFGSIDYVSPEALLQDR-ITSKSDMWSLGVILYILLSGYPPFIAQS 248
           ++ +    T+    + G+  Y+SPE L +D+    KSD+W+LGV+LY   +G  PF A +
Sbjct: 147 VAKLLSDNTNFANTIVGTPYYLSPE-LCEDKPYNEKSDVWALGVVLYECCTGKHPFDANN 205

Query: 249 NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHP 300
                  I+ G F    Q +   S    QLI   LT D  +RP   +LL +P
Sbjct: 206 QGALILKIIRGVFPPVSQMY---SQQLAQLIDQCLTKDYRQRPDTFQLLRNP 254

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score =  104 bits (262), Expect = 3e-25
 Identities = 72/282 (25%), Positives = 125/282 (44%), Gaps = 45/282 (15%)

Query: 42  IKTLRRIGSTTPYGFPGSRGSSSSSQI---GFFPTRKQVSV-SDALLTNEILVMRKIVEN 97
           ++ L  +G+       G+ G  S       G     K + +  +  +  +IL    I+  
Sbjct: 3   LEYLGELGA-------GNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHK 55

Query: 98  VSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRI--VAQERYMEVGAAAVIRQIAEGL 155
            +  P ++  Y  + +   + + +E   GG L D+I    Q R  E     +   + +GL
Sbjct: 56  CN-SPYIVGFYGAFYNNGDISICMEYMDGGSL-DKILKEVQGRIPERILGKIAVAVLKGL 113

Query: 156 AALH-QANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF-GSIDYVSP 213
             LH +  I+HRD+KP N L +N R    +K+ DFG+S      + +   F G+  Y++P
Sbjct: 114 TYLHEKHKIIHRDVKPSNIL-VNSRGQ--IKLCDFGVSGQ--LVNSLAKTFVGTSSYMAP 168

Query: 214 EALLQDRITSKSDMWSLGVILYILLSG---YPPFIAQSNRQKQQM----------IMAGE 260
           E +  +  + KSD+WSLG+ L  L +G   YPP     +   + +          + +G+
Sbjct: 169 ERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPSGK 228

Query: 261 FSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
           FS             +  ++  L  DP  RPS +ELL HP++
Sbjct: 229 FS----------PDFQDFVNLCLIKDPRERPSYKELLEHPFI 260

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional

 Score =  104 bits (262), Expect = 3e-25
 Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 28/215 (13%)

Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           +PN I LY       G  LI++    G+LFD +  + +  E     +IRQ+ E L  LH+
Sbjct: 68  NPNFIKLYYSVTTLKGHVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHK 127

Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF-GSIDYVSPEALLQD 219
            NI+H D+K EN L+  DR    + + D+GL  + G        + G++DY SPE +   
Sbjct: 128 HNIIHNDIKLENVLY--DRAKDRIYLCDYGLCKIIG----TPSCYDGTLDYFSPEKIKGH 181

Query: 220 RITSKSDMWSLGVILYILLSGYPPFIAQSN----------RQKQQMIMAGEFSFYEQTWK 269
                 D W++GV+ Y LL+G  PF    +          RQ++      +  F     K
Sbjct: 182 NYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQK------KLPFI----K 231

Query: 270 NISSSAKQLISSLLTVDPNRR-PSAQELLNHPWVI 303
           N+S +A   + S+L  + N R  +  E++ HP++ 
Sbjct: 232 NVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLK 266

Length = 267

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score =  104 bits (262), Expect = 3e-25
 Identities = 86/325 (26%), Positives = 142/325 (43%), Gaps = 90/325 (27%)

Query: 18  LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQV 77
           LG G ++ V +G  +T GE   VA+K +               G+ S++           
Sbjct: 8   LGEGTYATVYKGRNRTTGEI--VALKEIH---------LDAEEGTPSTA----------- 45

Query: 78  SVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE 137
                    EI +M+++      H N++ L+DV   +N + L+ E     +L       +
Sbjct: 46  -------IREISLMKEL-----KHENIVRLHDVIHTENKLMLVFEYMDK-DL-------K 85

Query: 138 RYMEV----GA--AAVIR----QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIM 187
           +YM+     GA     ++    Q+ +G+A  H+  ++HRDLKP+N L +N R +  LK+ 
Sbjct: 86  KYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQN-LLINKRGE--LKLA 142

Query: 188 DFGLSS-----VEGYTDPVVGLFGSIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGY 241
           DFGL+      V  +++ VV L+    Y +P+ LL  R  S S D+WS+G I+  +++G 
Sbjct: 143 DFGLARAFGIPVNTFSNEVVTLW----YRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGR 198

Query: 242 PPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAK------------------------- 276
           P F   +N  +   I     +  E TW  IS   +                         
Sbjct: 199 PLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGI 258

Query: 277 QLISSLLTVDPNRRPSAQELLNHPW 301
            L+  LL ++P  R SA + L HPW
Sbjct: 259 DLLHRLLQLNPELRISAHDALQHPW 283

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score =  105 bits (264), Expect = 5e-25
 Identities = 73/257 (28%), Positives = 107/257 (41%), Gaps = 79/257 (30%)

Query: 101 HPNVIDLYDVYEDQNG--VHLILELCSGGELFDRIVAQERYMEVGAAAVIR--------- 149
           HPN++ L +V + +N   ++L+ E                YME    AVIR         
Sbjct: 66  HPNIVKLLNVIKAENDKDIYLVFE----------------YMETDLHAVIRANILEDVHK 109

Query: 150 -----QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGL-----SSVEGYTD 199
                Q+ + L  +H  N++HRDLKP N + LN   D  +K+ DFGL        E   +
Sbjct: 110 RYIMYQLLKALKYIHSGNVIHRDLKPSN-ILLN--SDCRVKLADFGLARSLSELEENPEN 166

Query: 200 PVVGLFGSIDYV------SPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQK 252
           PV+      DYV      +PE LL     +K  DMWS+G IL  +L G P F   S   +
Sbjct: 167 PVL-----TDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQ 221

Query: 253 QQMIMAG--------------EFSF-------------YEQTWKNISSSAKQLISSLLTV 285
            + I+                 F+               ++     S  A  L+  LL  
Sbjct: 222 LEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVF 281

Query: 286 DPNRRPSAQELLNHPWV 302
           +PN+R +A+E L HP+V
Sbjct: 282 NPNKRLTAEEALEHPYV 298

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score =  103 bits (259), Expect = 7e-25
 Identities = 66/223 (29%), Positives = 106/223 (47%), Gaps = 19/223 (8%)

Query: 89  LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRI--VAQERYMEVGAAA 146
           L  +KI+E VS    ++ L   +E ++ + L++ L +GG+L   I  V +  + E  A  
Sbjct: 41  LNEKKILEKVSS-RFIVSLAYAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIF 99

Query: 147 VIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFG 206
              QI  GL  LHQ  IV+RDLKPEN L     +   ++I D GL+        + G  G
Sbjct: 100 YAAQIICGLEHLHQRRIVYRDLKPENVLL---DDHGNVRISDLGLAVELKGGKKIKGRAG 156

Query: 207 SIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQ----SNRQKQQMIMAGEFS 262
           +  Y++PE L  +      D ++LG  LY +++G  PF  +       + ++  +     
Sbjct: 157 TPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVE 216

Query: 263 FYEQTWKNISSSAKQLISSLLTVDPNRR-----PSAQELLNHP 300
           + ++     S  AK L  +LL  DP +R      SA E+  HP
Sbjct: 217 YPDK----FSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHP 255

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score =  102 bits (256), Expect = 4e-24
 Identities = 70/228 (30%), Positives = 118/228 (51%), Gaps = 26/228 (11%)

Query: 89  LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELF-----DRIVAQERYMEVG 143
           L   ++++N + HP +  L   ++ ++ +  ++E  +GGELF     +R+ +++R    G
Sbjct: 43  LTESRVLKN-TRHPFLTSLKYSFQTKDRLCFVMEYVNGGELFFHLSRERVFSEDRTRFYG 101

Query: 144 AAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVV- 202
           A     +I   L  LH   IV+RDLK EN +     +D  +KI DFGL   EG TD    
Sbjct: 102 A-----EIVSALDYLHSGKIVYRDLKLENLML---DKDGHIKITDFGLCK-EGITDAATM 152

Query: 203 -GLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEF 261
               G+ +Y++PE L  +      D W LGV++Y ++ G  PF  Q + +  ++I+  + 
Sbjct: 153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDI 212

Query: 262 SFYEQTWKNISSSAKQLISSLLTVDPNRR-----PSAQELLNHPWVIG 304
            F     + +S+ AK L+S LL  DPN+R       A+E++ H +  G
Sbjct: 213 KFP----RTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTG 256

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score =  102 bits (257), Expect = 7e-24
 Identities = 88/356 (24%), Positives = 148/356 (41%), Gaps = 77/356 (21%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
           D++E   ++GRG F  VR   KK  G  +  A+K LR+                 S  + 
Sbjct: 1   DDFESIKVIGRGAFGEVRLVQKKDTG--HIYAMKKLRK-----------------SEML- 40

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
               ++QV+   A    +IL         + +P V+ LY  ++D+N ++LI+E   GG++
Sbjct: 41  ---EKEQVAHVRA--ERDILAE-------ADNPWVVKLYYSFQDENYLYLIMEYLPGGDM 88

Query: 130 FDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDF 189
              ++ ++ + E      I +    + ++H+   +HRD+KP+N L   D     +K+ DF
Sbjct: 89  MTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLL--DA-KGHIKLSDF 145

Query: 190 GLSS-------------VEGYTDPVVGLF--------------------------GSIDY 210
           GL +             +          F                          G+ DY
Sbjct: 146 GLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDY 205

Query: 211 VSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKN 270
           ++PE  LQ     + D WSLGVI+Y +L GYPPF + + ++  + I+  + +        
Sbjct: 206 IAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQFPDEVP 265

Query: 271 ISSSAKQLISSLLTVDPNR--RPSAQELLNHPWVIG-DSAKEEEMDAEIVSRLQSF 323
           +S  AK LI  L      R       E+ +HP+  G D     E  A I+  L+S 
Sbjct: 266 LSPEAKDLIKRLCCEAERRLGNNGVNEIKSHPFFKGVDWEHIRERPAPIIPELKSI 321

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score =  102 bits (255), Expect = 8e-24
 Identities = 72/246 (29%), Positives = 114/246 (46%), Gaps = 17/246 (6%)

Query: 85  TNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGA 144
              +L  R I+   +    ++ L   ++D   ++L +E   GG+    +       E  A
Sbjct: 45  VRHVLTERDILTT-TKSEWLVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNNLGVLSEDHA 103

Query: 145 AAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVG 203
              + ++ E + ALH+   +HRDLKPEN  FL D     +K+ DFGLS  +  Y + VVG
Sbjct: 104 RFYMAEMFEAVDALHELGYIHRDLKPEN--FLIDA-SGHIKLTDFGLSKGIVTYANSVVG 160

Query: 204 LFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQS------NRQKQQMIM 257
              S DY++PE L         D WSLG +LY  L G+PPF   +      N +  +  +
Sbjct: 161 ---SPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETL 217

Query: 258 AGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIG-DSAKEEEMDAEI 316
             +   Y+    N+S  A  LI+ L+     R  S +++ NHP+    D  +  E+    
Sbjct: 218 --QRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKEVDWNELRELKPPF 275

Query: 317 VSRLQS 322
           V  L+S
Sbjct: 276 VPELES 281

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score =  103 bits (259), Expect = 9e-24
 Identities = 75/262 (28%), Positives = 127/262 (48%), Gaps = 28/262 (10%)

Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQER----YMEVGAAAVIRQIAEGLA 156
           H  ++  +D ++  + + LI+E  SGG+L  +I  + +    + E     +  QI   L 
Sbjct: 124 HFGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALD 183

Query: 157 ALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVV-----GLFGSIDYV 211
            +H   ++HRDLK  N   +       +K+ DFG S  + Y+D V         G+  Y+
Sbjct: 184 EVHSRKMMHRDLKSANIFLM---PTGIIKLGDFGFS--KQYSDSVSLDVASSFCGTPYYL 238

Query: 212 SPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNI 271
           +PE   + R + K+DMWSLGVILY LL+ + PF   S R+  Q ++ G+   Y+     +
Sbjct: 239 APELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGK---YDPFPCPV 295

Query: 272 SSSAKQLISSLLTVDPNRRPSAQELLNHPW----------VIGDSAKEEEMD-AEIVSRL 320
           SS  K L+  LL+ +P  RP+ Q+LL+  +          ++  S      D  EI+ +L
Sbjct: 296 SSGMKALLDPLLSKNPALRPTTQQLLHTEFLKYVANLFQDIVRHSETISPHDREEILRQL 355

Query: 321 QSFNARRKLRAAAIASVLSSTI 342
           Q    R    ++    V++S +
Sbjct: 356 QESGERAPPPSSIRYGVVTSDV 377

Length = 478

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score =  101 bits (254), Expect = 9e-24
 Identities = 61/212 (28%), Positives = 105/212 (49%), Gaps = 23/212 (10%)

Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELF-----DRIVAQERYMEVGAAAVIRQIAEGL 155
           HP +  L   ++  + +  ++E  +GGELF     +R+ +++R    GA     +I   L
Sbjct: 54  HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGA-----EIVSAL 108

Query: 156 AALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVE-GYTDPVVGLFGSIDYVSPE 214
             LH  ++V+RDLK EN +     +D  +KI DFGL          +    G+ +Y++PE
Sbjct: 109 GYLHSCDVVYRDLKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPE 165

Query: 215 ALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSS 274
            L  +      D W LGV++Y ++ G  PF  Q + +  ++I+  E  F     + +S  
Sbjct: 166 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP----RTLSPE 221

Query: 275 AKQLISSLLTVDPNRR-----PSAQELLNHPW 301
           AK L++ LL  DP +R       A+E++ H +
Sbjct: 222 AKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRF 253

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score =  100 bits (250), Expect = 1e-23
 Identities = 59/215 (27%), Positives = 92/215 (42%), Gaps = 30/215 (13%)

Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HPN++       +++ +++ LEL  GG L   +     + E       RQI  GL  LH 
Sbjct: 61  HPNIVQYLGTEREEDNLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHD 120

Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALL-QD 219
            N VHRD+K  N L   +     +K+ DFG++             GS  +++PE +  Q 
Sbjct: 121 RNTVHRDIKGANILVDTNGV---VKLADFGMAKQVVEFSFAKSFKGSPYWMAPEVIAQQG 177

Query: 220 RITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWK---------- 269
                +D+WSLG  +  + +G PP+               +       +K          
Sbjct: 178 GYGLAADIWSLGCTVLEMATGKPPW--------------SQLEGVAAVFKIGRSKELPPI 223

Query: 270 --NISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
             ++S  AK  I   L  DP+ RP+A ELL HP+V
Sbjct: 224 PDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV 258

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score =  100 bits (251), Expect = 1e-23
 Identities = 70/234 (29%), Positives = 124/234 (52%), Gaps = 17/234 (7%)

Query: 75  KQVSVSDA----LLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELF 130
           KQ+++       L+ NEILVMR   EN   HPN+++  D Y   + + +++E  +GG L 
Sbjct: 50  KQMNLQQQPKKELIINEILVMR---EN--KHPNIVNYLDSYLVGDELWVVMEYLAGGSLT 104

Query: 131 DRIVAQERYMEVGA-AAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDF 189
           D  V  E  M+ G  AAV R+  + L  LH   ++HRD+K +N L      D  +K+ DF
Sbjct: 105 D--VVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL---GMDGSVKLTDF 159

Query: 190 GL-SSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQS 248
           G  + +         + G+  +++PE + +     K D+WSLG++   ++ G PP++ + 
Sbjct: 160 GFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNE- 218

Query: 249 NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
           N  +   ++A   +   Q  + +S+  +  ++  L +D  +R SA+ELL HP++
Sbjct: 219 NPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFL 272

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score =  100 bits (252), Expect = 1e-23
 Identities = 65/219 (29%), Positives = 107/219 (48%), Gaps = 15/219 (6%)

Query: 89  LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVI 148
           +  ++++     HP +  L+  ++ ++ +  ++E  +GG+L   I    R+ E  A    
Sbjct: 43  MTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNGGDLMFHIQRSGRFDEPRARFYA 102

Query: 149 RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPV-VGLF-G 206
            +I  GL  LH+  I++RDLK +N L   D E   +KI DFG+   EG    V    F G
Sbjct: 103 AEIVLGLQFLHERGIIYRDLKLDNVLL--DSEGH-IKIADFGMCK-EGILGGVTTSTFCG 158

Query: 207 SIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQ 266
           + DY++PE L         D W+LGV+LY +L+G  PF      +  Q I+  E  +   
Sbjct: 159 TPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVRYP-- 216

Query: 267 TWKNISSSAKQLISSLLTVDPNRR-----PSAQELLNHP 300
             + +S  AK ++ S LT +P +R        Q++  HP
Sbjct: 217 --RWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHP 253

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 99.5 bits (248), Expect = 2e-23
 Identities = 69/227 (30%), Positives = 115/227 (50%), Gaps = 15/227 (6%)

Query: 81  DALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRI--VAQER 138
           +A+  NE    ++I+E V+    V+ L   YE ++ + L+L L +GG+L   I  +    
Sbjct: 44  EAMALNE----KQILEKVNS-RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPG 98

Query: 139 YMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYT 198
           + E  A     +I  GL  LH+  IV+RDLKPEN L L+D     ++I D GL+      
Sbjct: 99  FDEERAVFYAAEITCGLEDLHRERIVYRDLKPENIL-LDDY--GHIRISDLGLAVEIPEG 155

Query: 199 DPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMA 258
           + + G  G++ Y++PE +  +R T   D W LG ++Y ++ G  PF  +  + K++ +  
Sbjct: 156 ETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVER 215

Query: 259 GEFSFYEQTWKNISSSAKQLISSLLTVDPN-----RRPSAQELLNHP 300
                 E+  +  S +A+ +   LLT DP      R   A+E+  HP
Sbjct: 216 RVKEDQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHP 262

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 99.7 bits (248), Expect = 2e-23
 Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 19/229 (8%)

Query: 81  DALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRI--VAQER 138
           +++  NE    ++I+E V+    V+ L   YE ++ + L+L L +GG+L   I  + +  
Sbjct: 44  ESMALNE----KQILEKVNSR-FVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAG 98

Query: 139 YMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS--VEG 196
           + E  A     +I  GL  LHQ  IV+RDLKPEN L L+D     ++I D GL+    EG
Sbjct: 99  FEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENIL-LDD--HGHIRISDLGLAVHVPEG 155

Query: 197 YTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMI 256
            T  + G  G++ Y++PE +  +R T   D W+LG +LY +++G  PF  +  + K++ +
Sbjct: 156 QT--IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEV 213

Query: 257 MAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR-----PSAQELLNHP 300
                   E+  +  S  A+ L   LL  DP  R       A+E+  HP
Sbjct: 214 ERLVKEVQEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHP 262

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score =  100 bits (250), Expect = 3e-23
 Identities = 65/225 (28%), Positives = 110/225 (48%), Gaps = 19/225 (8%)

Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           R ++E+V   P ++ L+  ++ +  +HLIL+  SGGE+F  +  ++ + E        +I
Sbjct: 55  RNVLEHVRQSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEI 114

Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS--VEGYTDPVVGLFGSID 209
              L  LH+  IV+RD+K EN L      +  + + DFGLS   +    +      G+I+
Sbjct: 115 ILALEHLHKLGIVYRDIKLENILL---DSEGHVVLTDFGLSKEFLSEEKERTYSFCGTIE 171

Query: 210 YVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQ----QMIMAGEFSFY 264
           Y++PE +       K+ D WSLG++++ LL+G  PF  +  R  Q    + I+  +  F 
Sbjct: 172 YMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDPPFP 231

Query: 265 EQTWKNISSSAKQLISSLLTVDPNRR-----PSAQELLNHPWVIG 304
                 I   A+ L+  LL  DP +R       A E+  HP+  G
Sbjct: 232 SF----IGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKG 272

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 99.3 bits (248), Expect = 3e-23
 Identities = 79/331 (23%), Positives = 123/331 (37%), Gaps = 83/331 (25%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQ-VAIKTLRRIGSTTPYGFPGSRGSSSSSQI 68
           ++YEV  ++G G + VV +   K    T + VAIK            F  S       + 
Sbjct: 1   NKYEVLGVVGEGAYGVVLKCRNK---ATGEIVAIK-----------KFKESEDDEDVKKT 46

Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
                 ++V V   L                 H N+++L + +  +  ++L+ E      
Sbjct: 47  ----ALREVKVLRQL----------------RHENIVNLKEAFRRKGRLYLVFEYV-ERT 85

Query: 129 LFDRIVAQERYMEVGAAAV---IRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLK 185
           L + + A    +     AV   I Q+ + +A  H  NI+HRD+KPEN L     E   LK
Sbjct: 86  LLELLEASPGGL--PPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILV---SESGVLK 140

Query: 186 IMDFGL------SSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKS-DMWSLGVILYILL 238
           + DFG             TD V   +    Y +PE L+ D    K  D+W++G I+  LL
Sbjct: 141 LCDFGFARALRARPASPLTDYVATRW----YRAPELLVGDTNYGKPVDVWAIGCIMAELL 196

Query: 239 SGYPPFIAQS-------------NRQKQQMIMAGEFSFY--------------EQTWKNI 271
            G P F   S                     +      +              E+ +   
Sbjct: 197 DGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGK 256

Query: 272 SSS-AKQLISSLLTVDPNRRPSAQELLNHPW 301
            SS A   + + L +DP  R +  ELL HP+
Sbjct: 257 VSSPALDFLKACLRMDPKERLTCDELLQHPY 287

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 98.3 bits (245), Expect = 5e-23
 Identities = 64/245 (26%), Positives = 108/245 (44%), Gaps = 23/245 (9%)

Query: 75  KQVSVSDALLTNEILVMRKIVENVSP---------HPNVIDLYDVYEDQNGVHLILELCS 125
           KQV +   +        + +V+ +           H N++        +  + + LE   
Sbjct: 32  KQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEYLSIFLEYVP 91

Query: 126 GGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLK 185
           GG +   +    R+ E        Q+ EGLA LH   I+HRDLK +N L      D   K
Sbjct: 92  GGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLV---DADGICK 148

Query: 186 IMDFGLS--SVEGY-TDPVVGLFGSIDYVSPEALLQDR--ITSKSDMWSLGVILYILLSG 240
           I DFG+S  S + Y  D  + + GS+ +++PE +       ++K D+WSLG ++  + +G
Sbjct: 149 ISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAG 208

Query: 241 YPPFIAQSNRQKQQMIMAGEFS----FYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
             P+          M   G              N+S  A   +++  T++P+ RP+A+EL
Sbjct: 209 RRPW--SDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTAREL 266

Query: 297 LNHPW 301
           L HP+
Sbjct: 267 LQHPF 271

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 98.9 bits (246), Expect = 5e-23
 Identities = 66/228 (28%), Positives = 115/228 (50%), Gaps = 11/228 (4%)

Query: 83  LLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEV 142
           LL NE+++MR        H NV+++Y  Y     + +++E   GG L D IV+Q R  E 
Sbjct: 64  LLFNEVVIMRDY-----QHQNVVEMYKSYLVGEELWVLMEFLQGGALTD-IVSQTRLNEE 117

Query: 143 GAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPV- 201
             A V   + + L  LH   ++HRD+K ++ L      D  +K+ DFG  +      P  
Sbjct: 118 QIATVCESVLQALCYLHSQGVIHRDIKSDSILL---TLDGRVKLSDFGFCAQISKDVPKR 174

Query: 202 VGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEF 261
             L G+  +++PE + +    ++ D+WSLG+++  ++ G PP+ + S  Q  + +     
Sbjct: 175 KSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPP 234

Query: 262 SFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAKE 309
              +   K IS   +  +  +LT +P  R +AQELL+HP+++     E
Sbjct: 235 PKLKNAHK-ISPVLRDFLERMLTREPQERATAQELLDHPFLLQTGLPE 281

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 99.7 bits (248), Expect = 5e-23
 Identities = 68/219 (31%), Positives = 109/219 (49%), Gaps = 16/219 (7%)

Query: 88  ILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAV 147
           I+  R ++     HP ++ L+  ++  + ++ +L+  +GGELF  +  +  ++E  A   
Sbjct: 42  IMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFY 101

Query: 148 IRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIM--DFGLSSVEGYTDPVVGLF 205
             +IA  L  LH  NIV+RDLKPEN L      DS   I+  DFGL       +     F
Sbjct: 102 AAEIASALGYLHSLNIVYRDLKPENILL-----DSQGHIVLTDFGLCKENIEHNGTTSTF 156

Query: 206 -GSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFY 264
            G+ +Y++PE L +       D W LG +LY +L G PPF +++  +    I+       
Sbjct: 157 CGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPL--- 213

Query: 265 EQTWKNISSSAKQLISSLLTVDPNRRPSAQ----ELLNH 299
            Q   NI++SA+ L+  LL  D  +R  A+    E+ NH
Sbjct: 214 -QLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNH 251

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 99.3 bits (247), Expect = 5e-23
 Identities = 71/243 (29%), Positives = 124/243 (51%), Gaps = 27/243 (11%)

Query: 74  RKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELF--- 130
           RK+V ++   + + +   R +++N + HP +  L   ++  + +  ++E  +GGELF   
Sbjct: 29  RKEVIIAKDEVAHTVTESR-VLQN-TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL 86

Query: 131 --DRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMD 188
             +R+  +ER    GA     +I   L  LH  ++V+RD+K EN +   D     +KI D
Sbjct: 87  SRERVFTEERARFYGA-----EIVSALEYLHSRDVVYRDIKLENLMLDKDGH---IKITD 138

Query: 189 FGLSSVEGYTDPVV--GLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIA 246
           FGL   EG +D        G+ +Y++PE L  +      D W LGV++Y ++ G  PF  
Sbjct: 139 FGLCK-EGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 197

Query: 247 QSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR----PS-AQELLNHPW 301
           Q + +  ++I+  E  F     + +S  AK L++ LL  DP +R    PS A+E++ H +
Sbjct: 198 QDHERLFELILMEEIRFP----RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 253

Query: 302 VIG 304
            + 
Sbjct: 254 FLS 256

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 98.6 bits (245), Expect = 6e-23
 Identities = 66/222 (29%), Positives = 120/222 (54%), Gaps = 13/222 (5%)

Query: 83  LLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEV 142
           L+ NEILVMR+     + +PN+++  D Y   + + +++E  +GG L D  V  E  M+ 
Sbjct: 62  LIINEILVMRE-----NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD--VVTETCMDE 114

Query: 143 GA-AAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGL-SSVEGYTDP 200
           G  AAV R+  + L  LH   ++HRD+K +N L      D  +K+ DFG  + +      
Sbjct: 115 GQIAAVCRECLQALDFLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQITPEQSK 171

Query: 201 VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGE 260
              + G+  +++PE + +     K D+WSLG++   ++ G PP++ + N  +   ++A  
Sbjct: 172 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNE-NPLRALYLIATN 230

Query: 261 FSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
            +   Q  + +S+  +  ++  L +D +RR SA+ELL HP++
Sbjct: 231 GTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFL 272

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 98.6 bits (245), Expect = 6e-23
 Identities = 66/221 (29%), Positives = 114/221 (51%), Gaps = 11/221 (4%)

Query: 83  LLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEV 142
           LL NE+++MR        H NV+++Y+ Y   + + +++E   GG L D IV   R  E 
Sbjct: 63  LLFNEVVIMRDY-----QHENVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEE 116

Query: 143 GAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGL-SSVEGYTDPV 201
             AAV   + + L+ LH   ++HRD+K ++ L  +D     +K+ DFG  + V       
Sbjct: 117 QIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHD---GRVKLSDFGFCAQVSKEVPRR 173

Query: 202 VGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEF 261
             L G+  +++PE + +     + D+WSLG+++  ++ G PP+  +   +  +MI     
Sbjct: 174 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP 233

Query: 262 SFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
              +   K +S S K  +  LL  DP +R +A ELL HP++
Sbjct: 234 PKLKNLHK-VSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 273

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 98.7 bits (246), Expect = 9e-23
 Identities = 62/217 (28%), Positives = 114/217 (52%), Gaps = 16/217 (7%)

Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           R I+  V+ HP ++ L+  ++ +  ++LIL+   GG+LF R+  +  + E      + ++
Sbjct: 49  RDILAEVN-HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAEL 107

Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS--SVEGYTDPVVGLFGSID 209
           A  L  LH   I++RDLKPEN L     E+  +K+ DFGLS  S++          G+++
Sbjct: 108 ALALDHLHSLGIIYRDLKPENILL---DEEGHIKLTDFGLSKESIDH-EKKAYSFCGTVE 163

Query: 210 YVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWK 269
           Y++PE + +   T  +D WS GV+++ +L+G  PF  +  ++   MI+  +    +    
Sbjct: 164 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLGMPQ---- 219

Query: 270 NISSSAKQLISSLLTVDPNRRPSA-----QELLNHPW 301
            +S  A+ L+ +L   +P  R  A     +E+  HP+
Sbjct: 220 FLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPF 256

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 97.3 bits (242), Expect = 1e-22
 Identities = 64/220 (29%), Positives = 107/220 (48%), Gaps = 13/220 (5%)

Query: 86  NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYM--EVG 143
            E++++ K+      HPN++  +  +++   + +++E C GG+L  RI  Q   +  E  
Sbjct: 48  KEVILLAKM-----KHPNIVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQ 102

Query: 144 AAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV-EGYTDPVV 202
             +   QI+ GL  +H   I+HRD+K +N +FL+ +     K+ DFG++       +   
Sbjct: 103 ILSWFVQISLGLKHIHDRKILHRDIKSQN-IFLS-KNGMVAKLGDFGIARQLNDSMELAY 160

Query: 203 GLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFS 262
              G+  Y+SPE        +K+D+WSLG +LY L +   PF   +  Q    I  G F+
Sbjct: 161 TCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYFA 220

Query: 263 FYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
                  N S   + LIS L  V P  RPS   +L  P++
Sbjct: 221 ---PISPNFSRDLRSLISQLFKVSPRDRPSITSILKRPFL 257

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 97.7 bits (243), Expect = 1e-22
 Identities = 65/206 (31%), Positives = 104/206 (50%), Gaps = 6/206 (2%)

Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRI--VAQERYMEVGAAAVIR 149
           ++I+E V+    V++L   YE ++ + L+L + +GG+L   I  +    + E  A     
Sbjct: 51  KQILEKVNSQ-FVVNLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAA 109

Query: 150 QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSID 209
           +I  GL  LH+ N V+RDLKPEN L L+D     ++I D GL+      + + G  G++ 
Sbjct: 110 EILCGLEDLHRENTVYRDLKPENIL-LDD--YGHIRISDLGLAVKIPEGESIRGRVGTVG 166

Query: 210 YVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWK 269
           Y++PE L   R T   D W LG ++Y ++ G  PF  +  + K++ +        E    
Sbjct: 167 YMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSA 226

Query: 270 NISSSAKQLISSLLTVDPNRRPSAQE 295
             S  AK +   LLT DP +R   QE
Sbjct: 227 KFSEEAKSICKMLLTKDPKQRLGCQE 252

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 96.8 bits (241), Expect = 1e-22
 Identities = 71/228 (31%), Positives = 111/228 (48%), Gaps = 22/228 (9%)

Query: 84  LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVG 143
           L  EI +++++      H N++       D + +++ LE   GG +   +     + E  
Sbjct: 53  LAREIALLKEL-----QHENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGAFEETL 107

Query: 144 AAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFG---------LSSV 194
               +RQI +GL  LH   I+HRD+K  N L  N      +KI DFG         LS+ 
Sbjct: 108 VRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNK---GGIKISDFGISKKLEANSLSTK 164

Query: 195 EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQ 254
                P   L GS+ +++PE + Q   T K+D+WSLG ++  +L+G  PF   +  Q Q 
Sbjct: 165 TNGARP--SLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCT--QLQA 220

Query: 255 MIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
           +   GE +  E    NISS A   +     +D N+RP+A ELL HP++
Sbjct: 221 IFKIGENASPEIP-SNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 97.9 bits (244), Expect = 1e-22
 Identities = 66/220 (30%), Positives = 109/220 (49%), Gaps = 14/220 (6%)

Query: 88  ILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAV 147
           I+  R ++     HP ++ L+  ++  + ++ +L+  +GGELF  +  +  + E  A   
Sbjct: 42  IMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNGGELFFHLQRERSFPEPRARFY 101

Query: 148 IRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEG--YTDPVVGLF 205
             +IA  L  LH  NI++RDLKPEN L L+      + + DFGL   EG  ++       
Sbjct: 102 AAEIASALGYLHSLNIIYRDLKPENIL-LDS--QGHVVLTDFGLCK-EGIEHSKTTSTFC 157

Query: 206 GSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYE 265
           G+ +Y++PE L +       D W LG +LY +L G PPF ++   +    I+        
Sbjct: 158 GTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPL---- 213

Query: 266 QTWKNISSSAKQLISSLLTVDPNRRPSAQ----ELLNHPW 301
           +   NIS SA+ L+  LL  D  +R  A+    E+ NH +
Sbjct: 214 RLKPNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVF 253

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 97.5 bits (243), Expect = 1e-22
 Identities = 67/234 (28%), Positives = 104/234 (44%), Gaps = 32/234 (13%)

Query: 101 HPNVIDLYDVY--EDQNGVHLILELCSGGELFDRIVAQ--ERYMEVGAAAVIRQIAE--- 153
            P ++  Y  +  E  + + + +E C GG L D I  +  +R   +G   V+ +IAE   
Sbjct: 58  SPYIVKYYGAFLDESSSSIGIAMEYCEGGSL-DSIYKKVKKRGGRIGEK-VLGKIAESVL 115

Query: 154 -GLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF-GSIDYV 211
            GL+ LH   I+HRD+KP N L    R+   +K+ DFG+S      + + G F G+  Y+
Sbjct: 116 KGLSYLHSRKIIHRDIKPSNILL--TRKGQ-VKLCDFGVSG--ELVNSLAGTFTGTSFYM 170

Query: 212 SPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNI 271
           +PE +     +  SD+WSLG+ L  +     PF  +     +  +   E   Y     N 
Sbjct: 171 APERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPE----GEPPLGPIELLSYIVNMPNP 226

Query: 272 ------------SSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAKEEEMD 313
                       S   K  I   L  DP RRP+  ++L HPW+     K+  M 
Sbjct: 227 ELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQMKKKVNMA 280

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 96.5 bits (240), Expect = 2e-22
 Identities = 66/210 (31%), Positives = 101/210 (48%), Gaps = 18/210 (8%)

Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAE------- 153
           HP ++  +  + +++   +I E C G +L  ++   E     G      Q+ E       
Sbjct: 61  HPAIVKFHASFLERDAFCIITEYCEGRDLDCKL---EELKHTGKTLSENQVCEWFIQLLL 117

Query: 154 GLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDYVS 212
           G+  +HQ  I+HRDLK +N    N+     LKI DFG+S  + G  D      G+  Y+S
Sbjct: 118 GVHYMHQRRILHRDLKAKNIFLKNNL----LKIGDFGVSRLLMGSCDLATTFTGTPYYMS 173

Query: 213 PEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNIS 272
           PEAL      SKSD+WSLG ILY +      F  Q+       I+ G      +T+   S
Sbjct: 174 PEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGPTPSLPETY---S 230

Query: 273 SSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
                ++ S+L  DP+ RPSA E+L +P++
Sbjct: 231 RQLNSIMQSMLNKDPSLRPSAAEILRNPFI 260

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 97.0 bits (241), Expect = 2e-22
 Identities = 64/221 (28%), Positives = 115/221 (52%), Gaps = 11/221 (4%)

Query: 83  LLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEV 142
           LL NE+++MR        H NV+D+Y+ Y   + + +++E   GG L D IV   R  E 
Sbjct: 65  LLFNEVVIMRDY-----HHENVVDMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEE 118

Query: 143 GAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGL-SSVEGYTDPV 201
             A V   +   L+ LH   ++HRD+K ++ L  +D     +K+ DFG  + V       
Sbjct: 119 QIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSD---GRIKLSDFGFCAQVSKEVPKR 175

Query: 202 VGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEF 261
             L G+  +++PE + +    ++ D+WSLG+++  ++ G PP+  +   Q  + I     
Sbjct: 176 KSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLP 235

Query: 262 SFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
              + + K +SS  +  +  +L  +P++R +AQELL HP++
Sbjct: 236 PRVKDSHK-VSSVLRGFLDLMLVREPSQRATAQELLQHPFL 275

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 97.1 bits (242), Expect = 3e-22
 Identities = 89/347 (25%), Positives = 131/347 (37%), Gaps = 107/347 (30%)

Query: 12  YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFF 71
           YE+   LG+G + +V         E   VAIK +  + S                     
Sbjct: 2   YELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFS--------------------- 40

Query: 72  PTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYD---VYEDQ-NGVHLILELCSGG 127
              K++    AL   E+ ++R        H N+  LYD   V+    N ++L  EL    
Sbjct: 41  ---KKILAKRAL--RELKLLRHFRG----HKNITCLYDMDIVFPGNFNELYLYEEL---- 87

Query: 128 ELFDRIVAQERYMEVGAAAVIR---------------QIAEGLAALHQANIVHRDLKPEN 172
                       ME     +IR               QI  GL  +H AN++HRDLKP N
Sbjct: 88  ------------MEADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGN 135

Query: 173 CLFLNDREDSPLKIMDFGLS--------SVEGYTDPVVGLFGSIDYVSPEALLQDRITSK 224
            L   D E   LKI DFGL+           G+   +     +  Y +PE +L  +  +K
Sbjct: 136 LLVNADCE---LKICDFGLARGFSENPGENAGF---MTEYVATRWYRAPEIMLSFQSYTK 189

Query: 225 S-DMWSLGVILYILLSGYPPF-----IAQSNRQKQQM-------------IMAGEFSF-- 263
           + D+WS+G IL  LL   P F     + Q N+  Q +               A  +    
Sbjct: 190 AIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSL 249

Query: 264 -------YEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVI 303
                  +E  + N +  A  L+  LL  DP +R S +E L HP++ 
Sbjct: 250 PNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLA 296

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 96.0 bits (239), Expect = 3e-22
 Identities = 72/287 (25%), Positives = 124/287 (43%), Gaps = 35/287 (12%)

Query: 11  EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGF 70
           EY V + LG G F  V + ++K     N +A+K    I    P      R    S     
Sbjct: 1   EYAVLEHLGSGAFGCVYK-VRKKNNGQNLLALK---EINVHNPAFGKDKRERDKS----- 51

Query: 71  FPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELF 130
                   + D  + +E+     I++    HPN++  Y  + + + ++++++L  G  L 
Sbjct: 52  --------IGD--IVSEV----TIIKEQLRHPNIVRYYKTFLENDRLYIVMDLIEGAPLG 97

Query: 131 DRIVA----QERYMEVGAAAVIRQIAEGLAALH-QANIVHRDLKPENCLFLNDREDSPLK 185
           +   +    ++R+ E     +  Q+   L  LH +  IVHRDL P N +     ED  + 
Sbjct: 98  EHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIML---GEDDKVT 154

Query: 186 IMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFI 245
           I DFGL+  +     +  + G+I Y  PE +  +    K+D+W+ G ILY + +  PPF 
Sbjct: 155 ITDFGLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFY 214

Query: 246 AQSNRQKQQMIMAGEFS-FYEQTWKNISSSAKQLISSLLTVDPNRRP 291
           + +       I+   +    E  +   S     +I+S LT D   RP
Sbjct: 215 STNMLSLATKIVEAVYEPLPEGMY---SEDVTDVITSCLTPDAEARP 258

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 95.5 bits (238), Expect = 4e-22
 Identities = 83/296 (28%), Positives = 122/296 (41%), Gaps = 80/296 (27%)

Query: 18  LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQV 77
           LG G F  V  G   T   T +VA+KTL+          PG+                 +
Sbjct: 14  LGAGQFGEVWMG---TWNGTTKVAVKTLK----------PGT-----------------M 43

Query: 78  SVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE 137
           S    L   E  +M+K+      H  ++ LY V  ++  ++++ E  S G L D + + E
Sbjct: 44  SPEAFL--QEAQIMKKL-----RHDKLVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGE 96

Query: 138 -RYME----VGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS 192
            + +     V  AA   QIAEG+A L   N +HRDL   N L     E+   KI DFGL+
Sbjct: 97  GKKLRLPQLVDMAA---QIAEGMAYLESRNYIHRDLAARNILV---GENLVCKIADFGLA 150

Query: 193 SV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILLSGYPPFIAQS 248
            +   + YT    G    I + +PEA    R T KSD+WS G++L  I+  G  P+   +
Sbjct: 151 RLIEDDEYT-AREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMT 209

Query: 249 NRQKQQMIMAG---------EFSFYE---QTWKNISSSAKQLISSLLTVDPNRRPS 292
           NR+  + +  G             Y+   Q W                 DP  RP+
Sbjct: 210 NREVLEQVERGYRMPRPPNCPEELYDLMLQCWDK---------------DPEERPT 250

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 95.2 bits (237), Expect = 4e-22
 Identities = 80/288 (27%), Positives = 128/288 (44%), Gaps = 50/288 (17%)

Query: 18  LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQV 77
           +G+G F  V +G+ K   E   VA+KT R   ST P                  P  K+ 
Sbjct: 3   IGKGNFGDVYKGVLKGNTE---VAVKTCR---STLP------------------PDLKRK 38

Query: 78  SVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE 137
            + +A          +I++    HPN++ L  V   +  +++++EL  GG L   +  ++
Sbjct: 39  FLQEA----------EILKQYD-HPNIVKLIGVCVQKQPIYIVMELVPGGSLLTFLRKKK 87

Query: 138 RYMEVGA-AAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEG 196
             + V     +    A G+  L   N +HRDL   NCL     E++ LKI DFG+S  E 
Sbjct: 88  NRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLV---GENNVLKISDFGMSREE- 143

Query: 197 YTDPVVGLFGS-----IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNR 250
               +  +        I + +PEAL   R TS+SD+WS G++L+   S G  P+   SN+
Sbjct: 144 -EGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQ 202

Query: 251 QKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN 298
           Q ++ I +G   +     +       +L+      DP  RPS  E+ N
Sbjct: 203 QTRERIESG---YRMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYN 247

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 95.6 bits (238), Expect = 7e-22
 Identities = 82/326 (25%), Positives = 125/326 (38%), Gaps = 67/326 (20%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
           D YE  + +G G +  V +   K  G    VA+K  R                    + G
Sbjct: 1   DAYEKLEKIGEGTYGKVYKARDKNTG--KLVALKKTR----------------LEMDEEG 42

Query: 70  FFPTR-KQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYE--DQN-GVHLILELCS 125
             PT  +++S+   L  +  +V    VE+V        LY V+E  D +    +      
Sbjct: 43  IPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYLVFEYLDSDLKKFMDSNGRG 102

Query: 126 GGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLK 185
            G        +  +M         Q+ +G+A  H+  ++HRDLKP+N L   D++   LK
Sbjct: 103 PGRPLPAKTIK-SFM--------YQLLKGVAHCHKHGVMHRDLKPQNLLV--DKQKGLLK 151

Query: 186 IMDFGLSS-----VEGYTDPVVGLFGSIDYVSPEALLQDRITSKS-DMWSLGVILYILLS 239
           I D GL       V+ YT  +V L+    Y +PE LL     S   D+WS+G I   +  
Sbjct: 152 IADLGLGRAFSIPVKSYTHEIVTLW----YRAPEVLLGSTHYSTPVDIWSVGCIFAEMSR 207

Query: 240 GYPPFIAQSNRQKQQMIMAGEFSFYEQTW------------------------KNISSSA 275
             P F   S  Q+   I     +  EQ W                         ++S   
Sbjct: 208 KQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEG 267

Query: 276 KQLISSLLTVDPNRRPSAQELLNHPW 301
             L+  +L  DP +R SA+  L HP+
Sbjct: 268 LDLLQKMLRYDPAKRISAKAALTHPY 293

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 95.0 bits (237), Expect = 7e-22
 Identities = 73/308 (23%), Positives = 122/308 (39%), Gaps = 69/308 (22%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
           + + + + +G+G F  V + I K   +   VAIK +                  +  +I 
Sbjct: 1   ELFTLLECIGKGSFGEVYKAIDKRTNQV--VAIKVIDL--------------EEAEDEI- 43

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
                         +  EI  + +        P +   Y  +   + + +I+E C GG  
Sbjct: 44  ------------EDIQQEIQFLSQC-----RSPYITKYYGSFLKGSKLWIIMEYCGGGSC 86

Query: 130 FDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDF 189
            D +    +  E   A ++R++  GL  LH+   +HRD+K  N L   + +   +K+ DF
Sbjct: 87  LDLLKPG-KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGD---VKLADF 142

Query: 190 GLSSVEGYT----DPVVGL-FGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPP- 243
           G+S     T    +  VG  F    +++PE + Q     K+D+WSLG+    L  G PP 
Sbjct: 143 GVSGQLTSTMSKRNTFVGTPF----WMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPL 198

Query: 244 ---------FIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQ 294
                    F+   N      +   +F          S   K  +S  L  DP  RPSA+
Sbjct: 199 SDLHPMRVLFLIPKNNPPS--LEGNKF----------SKPFKDFVSLCLNKDPKERPSAK 246

Query: 295 ELLNHPWV 302
           ELL H ++
Sbjct: 247 ELLKHKFI 254

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 96.0 bits (239), Expect = 8e-22
 Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 8/203 (3%)

Query: 89  LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVI 148
           +V R+++     HP +  L+  ++ +  +  ++E  +GG+L   I +  R+ E  A    
Sbjct: 43  MVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNGGDLMFHIQSSGRFDEARARFYA 102

Query: 149 RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF-GS 207
            +I  GL  LH+  I++RDLK +N L   D+ D  +KI DFG+       +     F G+
Sbjct: 103 AEIICGLQFLHKKGIIYRDLKLDNVLL--DK-DGHIKIADFGMCKENMNGEGKASTFCGT 159

Query: 208 IDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQT 267
            DY++PE L   +     D WS GV+LY +L G  PF  +   +    I+  +   + + 
Sbjct: 160 PDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILN-DRPHFPRW 218

Query: 268 WKNISSSAKQLISSLLTVDPNRR 290
              IS  AK  +S L   DP +R
Sbjct: 219 ---ISKEAKDCLSKLFERDPTKR 238

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 95.8 bits (238), Expect = 8e-22
 Identities = 65/222 (29%), Positives = 104/222 (46%), Gaps = 18/222 (8%)

Query: 88  ILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAV 147
           I+  R ++     HP ++ L+  ++    ++ +L+  +GGELF  +  +  + E  A   
Sbjct: 42  IMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGGELFFHLQRERSFPEPRARFY 101

Query: 148 IRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIM--DFGLSSVEGY--TDPVVG 203
             +IA  L  LH  NIV+RDLKPEN L      DS   ++  DFGL   EG   +D    
Sbjct: 102 AAEIASALGYLHSINIVYRDLKPENILL-----DSQGHVVLTDFGLCK-EGIAQSDTTTT 155

Query: 204 LFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSF 263
             G+ +Y++PE + +    +  D W LG +LY +L G PPF  +   +    I+      
Sbjct: 156 FCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVL 215

Query: 264 YEQTWKNISSSAKQLISSLLTVDPNRRPSAQ----ELLNHPW 301
                   S +A  ++  LL  D  RR  A+    E+  HP+
Sbjct: 216 R----PGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPF 253

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 94.0 bits (234), Expect = 1e-21
 Identities = 71/250 (28%), Positives = 108/250 (43%), Gaps = 51/250 (20%)

Query: 18  LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQV 77
           LG G F  V  G+      T  VA+KTL+          PG+                 +
Sbjct: 14  LGAGQFGEVWEGL---WNNTTPVAVKTLK----------PGT-----------------M 43

Query: 78  SVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE 137
              D L   E  +M+K+      HP +I LY V   +  ++++ EL   G L + +    
Sbjct: 44  DPKDFL--AEAQIMKKL-----RHPKLIQLYAVCTLEEPIYIVTELMKYGSLLEYLQGGA 96

Query: 138 RYM-----EVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS 192
                    +  AA   Q+A G+A L   N +HRDL   N L     E++  K+ DFGL+
Sbjct: 97  GRALKLPQLIDMAA---QVASGMAYLEAQNYIHRDLAARNVLV---GENNICKVADFGLA 150

Query: 193 SV--EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILLSGYPPFIAQSN 249
            V  E   +   G    I + +PEA L +R + KSD+WS G++L  I+  G  P+   +N
Sbjct: 151 RVIKEDIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTN 210

Query: 250 RQKQQMIMAG 259
            +  Q +  G
Sbjct: 211 AEVLQQVDQG 220

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 94.8 bits (235), Expect = 1e-21
 Identities = 61/221 (27%), Positives = 117/221 (52%), Gaps = 11/221 (4%)

Query: 83  LLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEV 142
           L+ NEILVM+++      +PN+++  D +   + + +++E  +GG L D +V +    E 
Sbjct: 62  LIINEILVMKEL-----KNPNIVNFLDSFLVGDELFVVMEYLAGGSLTD-VVTETCMDEA 115

Query: 143 GAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGL-SSVEGYTDPV 201
             AAV R+  + L  LH   ++HRD+K +N L      D  +K+ DFG  + +       
Sbjct: 116 QIAAVCRECLQALEFLHANQVIHRDIKSDNVLL---GMDGSVKLTDFGFCAQITPEQSKR 172

Query: 202 VGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEF 261
             + G+  +++PE + +     K D+WSLG++   ++ G PP++ + N  +   ++A   
Sbjct: 173 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNE-NPLRALYLIATNG 231

Query: 262 SFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
           +   Q  + +S   +  ++  L +D  +R SA+ELL HP++
Sbjct: 232 TPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFL 272

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 95.1 bits (236), Expect = 2e-21
 Identities = 70/229 (30%), Positives = 116/229 (50%), Gaps = 27/229 (11%)

Query: 89  LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELF-----DRIVAQERYMEVG 143
           L   ++++N S HP +  L   ++  + +  ++E  +GGELF     +R+ +++R    G
Sbjct: 43  LTENRVLQN-SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYG 101

Query: 144 AAAVIRQIAEGLAALH-QANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVV 202
           A     +I   L  LH + N+V+RDLK EN +     +D  +KI DFGL   EG  D   
Sbjct: 102 A-----EIVSALDYLHSEKNVVYRDLKLENLML---DKDGHIKITDFGLCK-EGIKDGAT 152

Query: 203 --GLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGE 260
                G+ +Y++PE L  +      D W LGV++Y ++ G  PF  Q + +  ++I+  E
Sbjct: 153 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE 212

Query: 261 FSFYEQTWKNISSSAKQLISSLLTVDPNRR-----PSAQELLNHPWVIG 304
             F     + +S  AK L+S LL  DP +R       A+E++ H +  G
Sbjct: 213 IRFP----RTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAG 257

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 94.2 bits (235), Expect = 2e-21
 Identities = 60/188 (31%), Positives = 86/188 (45%), Gaps = 41/188 (21%)

Query: 148 IRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGL-----SSVEGYTDPVV 202
           + Q+  G+A LH   I+HRDLK  N L LN+R    LKI DFGL     S ++ YT  VV
Sbjct: 112 MLQLLSGVAHLHDNWILHRDLKTSN-LLLNNRGI--LKICDFGLAREYGSPLKPYTQLVV 168

Query: 203 GLFGSIDYVSPEALL-QDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIM---- 257
            L+    Y +PE LL     ++  DMWS+G I   LL+  P F  +S   +   I     
Sbjct: 169 TLW----YRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLG 224

Query: 258 ---------------AGEFSFYEQTWKNISSSAKQ---------LISSLLTVDPNRRPSA 293
                          A + +F +  +  +               L++ LLT DP +R SA
Sbjct: 225 TPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISA 284

Query: 294 QELLNHPW 301
           ++ L HP+
Sbjct: 285 EDALKHPY 292

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 92.9 bits (231), Expect = 3e-21
 Identities = 66/253 (26%), Positives = 106/253 (41%), Gaps = 34/253 (13%)

Query: 64  SSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILEL 123
           +  Q+ F P   +       L  EI +++ +      H  ++  Y    D   + + +E 
Sbjct: 31  AVKQVPFDPDSPETKKEVNALECEIQLLKNLQ-----HERIVQYYGCLRDDETLSIFMEY 85

Query: 124 CSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSP 183
             GG + D++ A     E       RQI EG+  LH   IVHRD+K  N L      DS 
Sbjct: 86  MPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANIL-----RDSA 140

Query: 184 --LKIMDFGLS-------SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVIL 234
             +K+ DFG S       S       V    G+  ++SPE +  +    K+D+WS+G  +
Sbjct: 141 GNVKLGDFGASKRLQTICSSGTGMKSVT---GTPYWMSPEVISGEGYGRKADVWSVGCTV 197

Query: 235 YILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWK-----NISSSAKQLISSLLTVDPNR 289
             +L+  PP+        +   MA  F    Q        ++S  A+  +      +  +
Sbjct: 198 VEMLTEKPPW-------AEFEAMAAIFKIATQPTNPQLPSHVSPDARNFLRRTFVENAKK 250

Query: 290 RPSAQELLNHPWV 302
           RPSA+ELL H +V
Sbjct: 251 RPSAEELLRHFFV 263

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 93.1 bits (232), Expect = 3e-21
 Identities = 80/324 (24%), Positives = 137/324 (42%), Gaps = 83/324 (25%)

Query: 9   TDEYEVTDILGRGGFSVVRRGIKKTCGETNQ-VAIKTLRRIGSTTPYGFPGSRGSSSSSQ 67
           T  +E+ +++G G +  V +   K   +T Q VAIK +  I                   
Sbjct: 5   TGIFELVEVIGEGTYGKVYKARHK---KTGQLVAIKIMDIIED----------------- 44

Query: 68  IGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVY--------EDQNGVHL 119
                        +  +  E  ++RK     S HPN+   Y  +        +DQ  + L
Sbjct: 45  ------------EEEEIKEEYNILRKY----SNHPNIATFYGAFIKKNPPGNDDQ--LWL 86

Query: 120 ILELCSGG---ELFDRIVAQERYM-EVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLF 175
           ++ELC GG   +L   +  + + + E   A ++R+   GLA LH+  ++HRD+K +N L 
Sbjct: 87  VMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILL 146

Query: 176 LNDREDSPLKIMDFGLS----SVEGYTDPVVGLFGSIDYVSPEALLQDR-----ITSKSD 226
             + E   +K++DFG+S    S  G  +  +   G+  +++PE +  D        ++SD
Sbjct: 147 TKNAE---VKLVDFGVSAQLDSTLGRRNTFI---GTPYWMAPEVIACDEQPDASYDARSD 200

Query: 227 MWSLGVILYILLSGYPPF--------IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQL 278
           +WSLG+    L  G PP         + +  R     + + E         N S      
Sbjct: 201 VWSLGITAIELADGKPPLCDMHPMRALFKIPRNPPPTLKSPE---------NWSKKFNDF 251

Query: 279 ISSLLTVDPNRRPSAQELLNHPWV 302
           IS  L  +  +RP  +ELL HP++
Sbjct: 252 ISECLIKNYEQRPFMEELLEHPFI 275

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 94.3 bits (235), Expect = 4e-21
 Identities = 74/238 (31%), Positives = 114/238 (47%), Gaps = 45/238 (18%)

Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      ED   V+L+  L  G +L + IV  ++  +     ++ QI  G
Sbjct: 73  HENVIGLLDVFTPASSLEDFQDVYLVTHL-MGADL-NNIVKCQKLSDDHIQFLVYQILRG 130

Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS--SVEGYTDPVVGLFGSIDYVS 212
           L  +H A I+HRDLKP N + +N  ED  LKI+DFGL+  + +  T  V   +    Y +
Sbjct: 131 LKYIHSAGIIHRDLKPSN-IAVN--EDCELKILDFGLARHTDDEMTGYVATRW----YRA 183

Query: 213 PEALLQDRITSKS-DMWSLGVILYILLSGYPPF-----IAQSNR-------------QKQ 253
           PE +L     +++ D+WS+G I+  LL+G   F     I Q  R             QK 
Sbjct: 184 PEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKI 243

Query: 254 QMIMAGEF--SFYEQTWKNI-------SSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
               A  +  S  +   K+        +  A  L+  +L +DP++R +A E L HP++
Sbjct: 244 SSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYL 301

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 93.2 bits (231), Expect = 4e-21
 Identities = 64/222 (28%), Positives = 118/222 (53%), Gaps = 13/222 (5%)

Query: 83  LLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEV 142
           L+ NEILVMR+     + +PN+++  D Y   + + +++E  +GG L D  V  E  M+ 
Sbjct: 63  LIINEILVMRE-----NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD--VVTETCMDE 115

Query: 143 GA-AAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGL-SSVEGYTDP 200
           G  AAV R+  + L  LH   ++HRD+K +N L      D  +K+ DFG  + +      
Sbjct: 116 GQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQITPEQSK 172

Query: 201 VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGE 260
              + G+  +++PE + +     K D+WSLG++   ++ G PP++ + N  +   ++A  
Sbjct: 173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE-NPLRALYLIATN 231

Query: 261 FSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
            +   Q  + +S+  +  ++  L +D  +R SA+ELL H ++
Sbjct: 232 GTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFL 273

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 92.4 bits (230), Expect = 7e-21
 Identities = 79/277 (28%), Positives = 122/277 (44%), Gaps = 73/277 (26%)

Query: 83  LLTNEILVMRKI-------------VENVS-----PHPNVIDLYDVYEDQNGVHLILELC 124
            LT EI+ ++KI             +  +S      HPN++ L DV   +N ++L+ E  
Sbjct: 21  KLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80

Query: 125 SGGELFDRIVAQERYME-----VGAAAVIR----QIAEGLAALHQANIVHRDLKPENCLF 175
                    +  ++YM+          +I+    Q+ +G+A  H   ++HRDLKP+N L 
Sbjct: 81  D--------LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLI 132

Query: 176 LNDREDSPLKIMDFGLSS-----VEGYTDPVVGLFGSIDYVSPEALLQDRITSKS-DMWS 229
             DRE + LK+ DFGL+      V  YT  VV L+    Y +PE LL  R  S   D+WS
Sbjct: 133 --DREGA-LKLADFGLARAFGVPVRTYTHEVVTLW----YRAPEILLGSRQYSTPVDIWS 185

Query: 230 LGVILYILLSGYPPF-----IAQSNRQKQQMIMAGEFSF--------YEQT---WK---- 269
           +G I   +++  P F     I Q  R  + +    E  +        Y+ T   W     
Sbjct: 186 IGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDL 245

Query: 270 -----NISSSAKQLISSLLTVDPNRRPSAQELLNHPW 301
                N+      L+S +L  DP +R SA+  L HP+
Sbjct: 246 SKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPY 282

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 92.0 bits (229), Expect = 1e-20
 Identities = 86/353 (24%), Positives = 135/353 (38%), Gaps = 106/353 (30%)

Query: 7   KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSS 66
           KL D YE+   LG G F  V +  +   G    VA+K +  +      GFP         
Sbjct: 6   KLRD-YEILGKLGEGTFGEVYKARQIKTGR--VVALKKI--LMHNEKDGFP--------- 51

Query: 67  QIGFFPTRKQVSVSDALLTNEILVMR--KIVENVSPHPNVIDLYD-VYE-------DQNG 116
                                I  +R  KI++ +  HPNV+ L D   E        +  
Sbjct: 52  ---------------------ITALREIKILKKLK-HPNVVPLIDMAVERPDKSKRKRGS 89

Query: 117 VHLIL-----ELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPE 171
           V+++      +L   G L +  V   +  E      + Q+ EG+  LH+ +I+HRD+K  
Sbjct: 90  VYMVTPYMDHDLS--GLLENPSV---KLTESQIKCYMLQLLEGINYLHENHILHRDIKAA 144

Query: 172 NCLFLNDREDSPLKIMDFGLSSV----------------EGYTDPVVGLFGSIDYVSPEA 215
           N L  N      LKI DFGL+                    YT+ VV  +    Y  PE 
Sbjct: 145 NILIDN---QGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRW----YRPPEL 197

Query: 216 LLQDR-ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMA---------------- 258
           LL +R  T+  D+W +G +   + +  P    +S+  +  +I                  
Sbjct: 198 LLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSL 257

Query: 259 ----GEFSF------YEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPW 301
               G  SF       E+ +  +      L+S LL++DP +R +A + L HP+
Sbjct: 258 PGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPY 310

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 92.4 bits (230), Expect = 1e-20
 Identities = 71/256 (27%), Positives = 110/256 (42%), Gaps = 76/256 (29%)

Query: 101 HPNVIDLYDV-----YEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIR------ 149
           H N+I + D+     +E  N V+++ EL                ME     +I+      
Sbjct: 62  HENIIGILDIIRPPSFESFNDVYIVQEL----------------METDLYKLIKTQHLSN 105

Query: 150 --------QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPV 201
                   QI  GL  +H AN++HRDLKP N L LN   D  LKI DFGL+ +    DP 
Sbjct: 106 DHIQYFLYQILRGLKYIHSANVLHRDLKPSN-LLLNTNCD--LKICDFGLARI---ADPE 159

Query: 202 VGLFGSI-DYV------SPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQ 253
               G + +YV      +PE +L  +  +K+ D+WS+G IL  +LS  P F  +    + 
Sbjct: 160 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQL 219

Query: 254 QMIM------------------AGEF----SFY-EQTWK----NISSSAKQLISSLLTVD 286
            +I+                  A  +     F  +  W     N    A  L+  +LT +
Sbjct: 220 NLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFN 279

Query: 287 PNRRPSAQELLNHPWV 302
           P++R + +E L HP++
Sbjct: 280 PHKRITVEEALAHPYL 295

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 91.0 bits (226), Expect = 2e-20
 Identities = 75/315 (23%), Positives = 139/315 (44%), Gaps = 45/315 (14%)

Query: 12  YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFF 71
           Y+  +++GRG +  V RG     G    VA+K    I   TP                  
Sbjct: 3   YQRLELIGRGAYGAVYRGKHVPTGRV--VALKI---INLDTP------------------ 39

Query: 72  PTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFD 131
                  VSD  +  E+ ++ ++ +  S  PN+   Y  Y     + +I+E   GG +  
Sbjct: 40  ----DDDVSD--IQREVALLSQLRQ--SQPPNITKYYGSYLKGPRLWIIMEYAEGGSVRT 91

Query: 132 RIVAQ---ERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMD 188
            + A    E+Y     + +IR++   L  +H+  ++HRD+K  N L  N      +K+ D
Sbjct: 92  LMKAGPIAEKY----ISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGN---VKLCD 144

Query: 189 FGLS-SVEGYTDPVVGLFGSIDYVSPEALLQDRI-TSKSDMWSLGVILYILLSGYPPFIA 246
           FG++  +   +       G+  +++PE + + +   +K+D+WSLG+ +Y + +G PP+  
Sbjct: 145 FGVAALLNQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSD 204

Query: 247 QSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDS 306
               +   +I   +    E      S   ++ +++ L  +P  R SA+ELL   W+   S
Sbjct: 205 VDAFRAMMLIPKSKPPRLED--NGYSKLLREFVAACLDEEPKERLSAEELLKSKWIKAHS 262

Query: 307 AKEEEMDAEIVSRLQ 321
                +  E++SR Q
Sbjct: 263 KTPVSILKELISRYQ 277

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 91.8 bits (228), Expect = 2e-20
 Identities = 59/206 (28%), Positives = 100/206 (48%), Gaps = 13/206 (6%)

Query: 102 PNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQA 161
           P +  L+  ++  + ++ ++E  +GG+L   I    ++ E  A     +IA GL  LH  
Sbjct: 61  PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSK 120

Query: 162 NIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF-GSIDYVSPEALLQDR 220
            I++RDLK +N +   D E   +KI DFG+     +       F G+ DY++PE +    
Sbjct: 121 GIIYRDLKLDNVML--DAEGH-IKIADFGMCKENIFGGKTTRTFCGTPDYIAPEIIAYQP 177

Query: 221 ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLIS 280
                D W+ GV+LY +L+G PPF  +   +  Q IM    S+     K++S  A  +  
Sbjct: 178 YGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYP----KSLSKEAVSICK 233

Query: 281 SLLTVDPNRR----PSA-QELLNHPW 301
            LLT  P +R    P+  +++  H +
Sbjct: 234 GLLTKHPAKRLGCGPTGERDIREHAF 259

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 91.6 bits (227), Expect = 2e-20
 Identities = 65/222 (29%), Positives = 105/222 (47%), Gaps = 18/222 (8%)

Query: 86  NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAA 145
           N I+  R ++     HP ++ L+  ++    ++ +L+  +GGELF  +  +  ++E  A 
Sbjct: 40  NHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNGGELFFHLQRERCFLEPRAR 99

Query: 146 AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSP--LKIMDFGLSSVEGY--TDPV 201
               ++A  +  LH  NI++RDLKPEN L      DS   + + DFGL   EG    +  
Sbjct: 100 FYAAEVASAIGYLHSLNIIYRDLKPENILL-----DSQGHVVLTDFGLCK-EGVEPEETT 153

Query: 202 VGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEF 261
               G+ +Y++PE L ++      D W LG +LY +L G PPF ++   Q    I+    
Sbjct: 154 STFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPL 213

Query: 262 SFYEQTWKNISSSAKQLISSLLTVDPNRRPSA----QELLNH 299
               Q     + +A  L+  LL  D  RR  A     E+ NH
Sbjct: 214 ----QLPGGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNH 251

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 90.3 bits (224), Expect = 3e-20
 Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 9/208 (4%)

Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVI---RQIAEGLAA 157
           H N++       +     + +E   GG L   + ++   ++     +I   +QI EGL  
Sbjct: 64  HRNIVQYLGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKY 123

Query: 158 LHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF-GSIDYVSPEAL 216
           LH   IVHRD+K +N L   +     +KI DFG S      +P    F G++ Y++PE +
Sbjct: 124 LHDNQIVHRDIKGDNVLV--NTYSGVVKISDFGTSKRLAGINPCTETFTGTLQYMAPEVI 181

Query: 217 LQDR--ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSS 274
            +      + +D+WSLG  +  + +G PPFI     Q   M   G F  + +  +++S+ 
Sbjct: 182 DKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQA-AMFKVGMFKIHPEIPESLSAE 240

Query: 275 AKQLISSLLTVDPNRRPSAQELLNHPWV 302
           AK  I      DP++R SA +LL  P++
Sbjct: 241 AKNFILRCFEPDPDKRASAHDLLQDPFL 268

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 89.4 bits (222), Expect = 5e-20
 Identities = 73/288 (25%), Positives = 116/288 (40%), Gaps = 55/288 (19%)

Query: 18  LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQV 77
           LG G F VV  G  +       VAIK +R                 + S+  F       
Sbjct: 12  LGSGQFGVVHLGKWRG---KIDVAIKMIRE---------------GAMSEDDFI------ 47

Query: 78  SVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE 137
                    E  VM K+      HPN++ LY V   Q  + ++ E  + G L + +  ++
Sbjct: 48  --------EEAKVMMKL-----SHPNLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERK 94

Query: 138 RYMEVGAAAVI----RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS 193
                     +      + E +  L     +HRDL   NCL     ED+ +K+ DFGL+ 
Sbjct: 95  ---GKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLV---GEDNVVKVSDFGLAR 148

Query: 194 V---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSN 249
               + YT      F  + +  PE     R +SKSD+WS GV+++ + S G  P+   SN
Sbjct: 149 YVLDDQYTSSQGTKF-PVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSN 207

Query: 250 RQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELL 297
            +  + + AG +  Y    K   +    ++ S     P  RP+ ++LL
Sbjct: 208 SEVVESVSAG-YRLYRP--KLAPTEVYTIMYSCWHEKPEDRPAFKKLL 252

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 89.9 bits (223), Expect = 5e-20
 Identities = 81/330 (24%), Positives = 143/330 (43%), Gaps = 64/330 (19%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
           DE EV D LG+G +  V + + +  G T  +A+K +R                       
Sbjct: 1   DEIEVLDELGKGNYGSVYKVLHRPTGVT--MAMKEIR----------------------- 35

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
                  + + ++     I+ +  + + VSP+  ++D Y  +  +  V++ +E    G L
Sbjct: 36  -------LELDESKFNQIIMELDILHKAVSPY--IVDFYGAFFIEGAVYMCMEYMDAGSL 86

Query: 130 FDRIVAQERYMEVGAAAVIRQIA----EGLAAL-HQANIVHRDLKPENCLFLNDREDSPL 184
            D++ A     E     V+R+I     +GL  L  + NI+HRD+KP N L   + +   +
Sbjct: 87  -DKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQ---V 142

Query: 185 KIMDFGLSSVEGYTDPVVGL----FGSIDYVSPEAL----LQDRIT--SKSDMWSLGVIL 234
           K+ DFG+S      + V  L     G   Y++PE +         T   +SD+WSLG+ +
Sbjct: 143 KLCDFGVSG-----NLVASLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSI 197

Query: 235 YILLSG---YPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRP 291
             +  G   YPP    +   +   I+ G+       +   S  A+  ++  L   PNRRP
Sbjct: 198 LEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSGY---SDDAQDFVAKCLNKIPNRRP 254

Query: 292 SAQELLNHPWVIGDSAKEEEMDAEIVSRLQ 321
           +  +LL HPW++     + +M   +   L+
Sbjct: 255 TYAQLLEHPWLVKYKNADVDMAEWVTGALK 284

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 89.2 bits (221), Expect = 6e-20
 Identities = 81/293 (27%), Positives = 129/293 (44%), Gaps = 49/293 (16%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
            E  +   +G G F +V  G      E  +VAIKT+R                      G
Sbjct: 4   SELTLVQEIGSGQFGLVWLGYWL---EKRKVAIKTIRE---------------------G 39

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
                    +S+     E  VM K+      HP ++ LY V  +++ + L+ E    G L
Sbjct: 40  A--------MSEEDFIEEAQVMMKL-----SHPKLVQLYGVCTERSPICLVFEFMEHGCL 86

Query: 130 FDRIVAQE-RYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMD 188
            D + AQ  ++ +     +   + EG+A L  +N++HRDL   NCL     E+  +K+ D
Sbjct: 87  SDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLV---GENQVVKVSD 143

Query: 189 FGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPF 244
           FG++     + YT      F  + + SPE     + +SKSD+WS GV+++ + S G  P+
Sbjct: 144 FGMTRFVLDDQYTSSTGTKF-PVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPY 202

Query: 245 IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELL 297
             +SN +  + I AG F  Y+   +  S S  +L+       P  RPS   LL
Sbjct: 203 ENRSNSEVVETINAG-FRLYKP--RLASQSVYELMQHCWKERPEDRPSFSLLL 252

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 88.9 bits (220), Expect = 7e-20
 Identities = 60/206 (29%), Positives = 107/206 (51%), Gaps = 10/206 (4%)

Query: 101 HPNVIDLYDVYEDQNG-VHLILELCSGGELFDRIVAQ--ERYMEVGAAAVIRQIAEGLAA 157
           HPN++   + +E ++G +++++  C GG+L+ ++  Q  +   E        QIA  L  
Sbjct: 58  HPNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQY 117

Query: 158 LHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV-EGYTDPVVGLFGSIDYVSPEAL 216
           LH+ +I+HRDLK +N +FL     + +K+ D G++ V E   D    L G+  Y+SPE  
Sbjct: 118 LHEKHILHRDLKTQN-VFLT--RTNIIKVGDLGIARVLENQCDMASTLIGTPYYMSPELF 174

Query: 217 LQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAK 276
                  KSD+W+LG  +Y + +    F A+        I+ G+        K+ S    
Sbjct: 175 SNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLP---PMPKDYSPELG 231

Query: 277 QLISSLLTVDPNRRPSAQELLNHPWV 302
           +LI+++L+  P +RPS + +L  P++
Sbjct: 232 ELIATMLSKRPEKRPSVKSILRQPYI 257

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 88.2 bits (219), Expect = 1e-19
 Identities = 58/231 (25%), Positives = 98/231 (42%), Gaps = 45/231 (19%)

Query: 11  EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGF 70
           E ++   +G+G F  V  G  +      +VA+K L+   +                    
Sbjct: 7   ELKLGATIGKGEFGDVMLGDYRG----QKVAVKCLKDDSTA------------------- 43

Query: 71  FPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELF 130
                    + A L  E  VM  +      HPN++ L  V    N ++++ E  + G L 
Sbjct: 44  ---------AQAFLA-EASVMTTL-----RHPNLVQLLGVVLQGNPLYIVTEYMAKGSLV 88

Query: 131 DRIVAQERYMEVGAAAVI--RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMD 188
           D + ++ R +   A  +     + EG+  L + N VHRDL   N L     ED   K+ D
Sbjct: 89  DYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLV---SEDLVAKVSD 145

Query: 189 FGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS 239
           FGL+           L   + + +PEAL + + ++KSD+WS G++L+ + S
Sbjct: 146 FGLAKEASQGQDSGKL--PVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 194

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 88.0 bits (218), Expect = 1e-19
 Identities = 58/205 (28%), Positives = 102/205 (49%), Gaps = 9/205 (4%)

Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE--RYMEVGAAAVIRQIAEGLAAL 158
           HPN++   + +E+   ++++++ C GG+L+ +I AQ    + E        QI   L  +
Sbjct: 58  HPNIVQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHV 117

Query: 159 HQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVV-GLFGSIDYVSPEALL 217
           H   I+HRD+K +N +FL   +D  +K+ DFG++ V   T  +     G+  Y+SPE   
Sbjct: 118 HDRKILHRDIKSQN-IFLT--KDGTIKLGDFGIARVLNSTVELARTCIGTPYYLSPEICE 174

Query: 218 QDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQ 277
                +KSD+W+LG +LY + +    F A + +     I+ G    Y     + S   + 
Sbjct: 175 NRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGS---YPPVSSHYSYDLRN 231

Query: 278 LISSLLTVDPNRRPSAQELLNHPWV 302
           L+S L   +P  RPS   +L   ++
Sbjct: 232 LVSQLFKRNPRDRPSVNSILEKNFI 256

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 89.7 bits (223), Expect = 1e-19
 Identities = 79/349 (22%), Positives = 134/349 (38%), Gaps = 88/349 (25%)

Query: 7   KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSS 66
            +   Y+  + +G G + VV   I    G+  +VAIK                       
Sbjct: 2   DVGSRYKPIENIGSGAYGVVCSAIDTRSGK--KVAIK----------------------- 36

Query: 67  QIGFFPTRKQVSVSDALLT-----NEILVMRKIVENVSPHPNVIDLYDVY----EDQNGV 117
                   K     D          E+ ++R        H N+I + D+      D   V
Sbjct: 37  --------KIPHAFDVPTLAKRTLRELKILRHF-----KHDNIIAIRDILRPPGADFKDV 83

Query: 118 HLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLN 177
           +++++L    +L   I + +   E      + Q+  GL  +H AN++HRDLKP N L +N
Sbjct: 84  YVVMDL-MESDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSN-LLVN 141

Query: 178 DREDSPLKIMDFGLSSVEGY-TDPVVGLFGSIDYVS------PEALLQ-DRITSKSDMWS 229
             ED  L+I DFG++   G  + P    +   +YV+      PE LL     T+  DMWS
Sbjct: 142 --EDCELRIGDFGMA--RGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWS 197

Query: 230 LGVILYILLSGYPPFIAQSNRQKQQMIM------AGEF--------------SFYEQT-- 267
           +G I   +L     F  ++   + ++I+      + E               +   +   
Sbjct: 198 VGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPV 257

Query: 268 -WKNISSSAKQ----LISSLLTVDPNRRPSAQELLNHPWVIGDSAKEEE 311
            W  I   A      L+S +L  DP  R + ++ L HP++      ++E
Sbjct: 258 PWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYHDPDDE 306

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 87.8 bits (218), Expect = 2e-19
 Identities = 83/292 (28%), Positives = 127/292 (43%), Gaps = 44/292 (15%)

Query: 14  VTDILGRGGFSVVRRGIKKTCGETN-QVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFP 72
           +  ++G G F  V RG  K  G+    VAIKTL+              GSS   ++ F  
Sbjct: 8   IEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKA-------------GSSDKQRLDF-- 52

Query: 73  TRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDR 132
                      LT E  +M +       HPN+I L  V      V +I E    G L   
Sbjct: 53  -----------LT-EASIMGQF-----DHPNIIRLEGVVTKSRPVMIITEYMENGSLDKF 95

Query: 133 IVAQERYMEVGA-AAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGL 191
           +   +    VG    ++R IA G+  L + N VHRDL   N L +N   +   K+ DFGL
Sbjct: 96  LRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNIL-VN--SNLVCKVSDFGL 152

Query: 192 SSVEGYTDPVVGLFG---SIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQ 247
           S     ++      G    I + +PEA+   + TS SD+WS G++++ ++S G  P+   
Sbjct: 153 SRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDM 212

Query: 248 SNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH 299
           SN   Q +I A E  +      +  S+  QL+      D N RP+  ++++ 
Sbjct: 213 SN---QDVIKAVEDGYRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVST 261

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 87.9 bits (218), Expect = 2e-19
 Identities = 75/300 (25%), Positives = 125/300 (41%), Gaps = 50/300 (16%)

Query: 9   TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQI 68
              +++   +G+G FSVV + I    G    VA+K                       ++
Sbjct: 1   LGNFKIEKKIGKGQFSVVYKAICLLDG--RVVALK-----------------------KV 35

Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
             F      +  D L   EI +++++      HPNVI     + + N ++++LEL   G+
Sbjct: 36  QIFEMMDAKARQDCL--KEIDLLKQL-----DHPNVIKYLASFIENNELNIVLELADAGD 88

Query: 129 LFDRI---VAQERYM-EVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPL 184
           L   I     Q+R + E        Q+   L  +H   I+HRD+KP N +F+       +
Sbjct: 89  LSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPAN-VFIT--ATGVV 145

Query: 185 KIMDFGL----SSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSG 240
           K+ D GL    SS    T     L G+  Y+SPE + ++    KSD+WSLG +LY + + 
Sbjct: 146 KLGDLGLGRFFSS---KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAAL 202

Query: 241 YPPFIAQSNRQKQ--QMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN 298
             PF           + I   ++        + S   + L+S  +  DP +RP    +L 
Sbjct: 203 QSPFYGDKMNLYSLCKKIEKCDYPPLPA--DHYSEELRDLVSRCINPDPEKRPDISYVLQ 260

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 89.1 bits (221), Expect = 2e-19
 Identities = 77/303 (25%), Positives = 127/303 (41%), Gaps = 66/303 (21%)

Query: 53  PYGFPGSRG---SSSSSQIGFFPTRKQVSVSDAL----LTNEILVMRKIVENVSPHPNVI 105
           P G  GS G   S+  S        K++ ++D         EI ++R++      H N++
Sbjct: 12  PLGC-GSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRL-----DHDNIV 65

Query: 106 DLYDV-----YEDQNGVHLILEL---CSGGELFD----RIVAQERYMEVGAAAVIRQIAE 153
            +Y+V      +    V  + EL       E  +     ++ Q    E  A   + Q+  
Sbjct: 66  KVYEVLGPSGSDLTEDVGSLTELNSVYIVQEYMETDLANVLEQGPLSEEHARLFMYQLLR 125

Query: 154 GLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS-------SVEGY-TDPVVGLF 205
           GL  +H AN++HRDLKP N +F+N  ED  LKI DFGL+       S +GY ++ +V  +
Sbjct: 126 GLKYIHSANVLHRDLKPAN-VFIN-TEDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKW 183

Query: 206 GSIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYP------------------PFIA 246
               Y SP  LL     +K+ DMW+ G I   +L+G P                  P + 
Sbjct: 184 ----YRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVR 239

Query: 247 QSNRQKQQMIMAGEFSFY--------EQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN 298
           + +R +   ++                     ++  A   +  +LT +P  R +A+E L 
Sbjct: 240 EEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM 299

Query: 299 HPW 301
           HP+
Sbjct: 300 HPY 302

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 87.1 bits (216), Expect = 3e-19
 Identities = 66/253 (26%), Positives = 94/253 (37%), Gaps = 66/253 (26%)

Query: 18  LGRGGFSVVRRGIKKTC-GETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQ 76
           LG G F VVRRG   T  G+   VA+K L+                            K 
Sbjct: 3   LGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSD--------------------------KL 36

Query: 77  VSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ 136
             + D  L  E  +M  +      H N+I LY V      + ++ EL   G L DR+   
Sbjct: 37  SDIMDDFL-KEAAIMHSL-----DHENLIRLYGVVLTHP-LMMVTELAPLGSLLDRL--- 86

Query: 137 ERYMEVGAAAVIR------QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFG 190
            R   +G   +        QIA G+  L     +HRDL   N L  +D +   +KI DFG
Sbjct: 87  -RKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDK---VKIGDFG 142

Query: 191 LSSVEGYTD-----------PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS 239
           L       +           P         + +PE+L     +  SD+W  GV L+ + +
Sbjct: 143 LMRALPQNEDHYVMEEHLKVP-------FAWCAPESLRTRTFSHASDVWMFGVTLWEMFT 195

Query: 240 -GYPPFIAQSNRQ 251
            G  P+   S  Q
Sbjct: 196 YGEEPWAGLSGSQ 208

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 88.9 bits (220), Expect = 3e-19
 Identities = 81/337 (24%), Positives = 139/337 (41%), Gaps = 81/337 (24%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
           D++E   ++GRG F  VR   KK  G     A+K LR+                      
Sbjct: 1   DDFESLKVIGRGAFGEVRLVQKKDTGHI--YAMKILRK---------------------- 36

Query: 70  FFPTRKQVSVSDALLTNEILVMRK----IVENVSPHPNVIDLYDVYEDQNGVHLILELCS 125
                     +D L   ++  +R     +VE  +    V+ ++  ++D+  ++LI+E   
Sbjct: 37  ----------ADMLEKEQVAHIRAERDILVE--ADGAWVVKMFYSFQDKRNLYLIMEFLP 84

Query: 126 GGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLK 185
           GG++   ++ ++   E      I +    + A+HQ   +HRD+KP+N L L+ +    +K
Sbjct: 85  GGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDN-LLLDAK--GHVK 141

Query: 186 IMDFGLSS-------VEGYTDPV-----------------------------VGLFGSID 209
           + DFGL +        E Y +                                   G+ D
Sbjct: 142 LSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPD 201

Query: 210 YVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWK 269
           Y++PE  +Q       D WSLGVI+Y +L GYPPF +++ ++  + +M  + +       
Sbjct: 202 YIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKETLVFPPEV 261

Query: 270 NISSSAKQLISSLLTVDPNR--RPSAQELLNHPWVIG 304
            IS  AK LI    T   NR      +E+ +HP+  G
Sbjct: 262 PISEKAKDLILRFCTDSENRIGSNGVEEIKSHPFFEG 298

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 88.4 bits (219), Expect = 3e-19
 Identities = 57/200 (28%), Positives = 97/200 (48%), Gaps = 8/200 (4%)

Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           ++I+     HP +  LY  ++  + +  ++E  +GG+L   I    R+ E  A     +I
Sbjct: 46  KRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEI 105

Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF-GSIDY 210
              L  LH   I++RDLK +N L   D E    K+ DFG+     +       F G+ DY
Sbjct: 106 TSALMFLHDKGIIYRDLKLDNVLL--DHEGH-CKLADFGMCKEGIFNGKTTSTFCGTPDY 162

Query: 211 VSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKN 270
           ++PE L +       D W++GV+LY +L G+ PF A++     + I+  E  +   TW  
Sbjct: 163 IAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVY--PTW-- 218

Query: 271 ISSSAKQLISSLLTVDPNRR 290
           +S  A  ++ + +T +P  R
Sbjct: 219 LSQDAVDILKAFMTKNPTMR 238

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 86.8 bits (215), Expect = 4e-19
 Identities = 79/294 (26%), Positives = 126/294 (42%), Gaps = 54/294 (18%)

Query: 17  ILGRGGFSVVRRGIKKTC----GETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFP 72
            LG G F  V  G             +VA+KTLR+             G++   +  F  
Sbjct: 2   FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRK-------------GATDQEKKEFL- 47

Query: 73  TRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL--F 130
                         E  +M         HPN++ L  V       ++I+EL  GG+L  +
Sbjct: 48  -------------KEAHLMSNF-----NHPNIVKLLGVCLLNEPQYIIMELMEGGDLLSY 89

Query: 131 DRIVAQERYMEVGAA-----AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSP-- 183
            R    ER+            +   +A+G   L Q + +HRDL   NCL      D+   
Sbjct: 90  LRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRV 149

Query: 184 LKIMDFGLS----SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILL 238
           +KI DFGL+      + Y     GL   + +++PE+LL  + T++SD+WS GV+++ IL 
Sbjct: 150 VKIGDFGLARDIYKSDYYRKEGEGLL-PVRWMAPESLLDGKFTTQSDVWSFGVLMWEILT 208

Query: 239 SGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPS 292
            G  P+ A +N++  Q + AG      Q  +N      QL+++    DP+ RP+
Sbjct: 209 LGQQPYPALNNQEVLQHVTAGG---RLQKPENCPDKIYQLMTNCWAQDPSERPT 259

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 87.1 bits (216), Expect = 4e-19
 Identities = 66/243 (27%), Positives = 106/243 (43%), Gaps = 59/243 (24%)

Query: 101 HPNVIDLYDVYEDQNGVHLILELCS----------GGELFDRIVAQERYMEVGAAAVIRQ 150
           H N++ LYDV      + L+ E C            G++ D  + +         + + Q
Sbjct: 58  HKNIVRLYDVLHSDKKLTLVFEYCDQDLKKYFDSCNGDI-DPEIVK---------SFMFQ 107

Query: 151 IAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-----VEGYTDPVVGLF 205
           + +GLA  H  N++HRDLKP+N L +N   +  LK+ DFGL+      V  Y+  VV L+
Sbjct: 108 LLKGLAFCHSHNVLHRDLKPQN-LLINKNGE--LKLADFGLARAFGIPVRCYSAEVVTLW 164

Query: 206 GSIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEF-SF 263
               Y  P+ L   ++ S S DMWS G I   L +   P    ++   Q   +     + 
Sbjct: 165 ----YRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTP 220

Query: 264 YEQTWKNIS-------------------------SSAKQLISSLLTVDPNRRPSAQELLN 298
            E++W  +S                         S+ + L+ +LL  +P +R SA+E L 
Sbjct: 221 TEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280

Query: 299 HPW 301
           HP+
Sbjct: 281 HPY 283

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 87.0 bits (215), Expect = 5e-19
 Identities = 67/227 (29%), Positives = 112/227 (49%), Gaps = 15/227 (6%)

Query: 81  DALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRI--VAQER 138
           +A+  NE    ++I+E V+    V+ L   YE ++ + L+L + +GG+L   I  +    
Sbjct: 44  EAMALNE----KRILEKVNSR-FVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPG 98

Query: 139 YMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYT 198
           + E  A     ++  GL  L +  IV+RDLKPEN L L+DR    ++I D GL+      
Sbjct: 99  FDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENIL-LDDR--GHIRISDLGLAVQIPEG 155

Query: 199 DPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMA 258
           + V G  G++ Y++PE +  ++ T   D W LG ++Y ++ G  PF  +  R K++ +  
Sbjct: 156 ETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDR 215

Query: 259 GEFSFYEQTWKNISSSAKQLISSLLTVDPNRR-----PSAQELLNHP 300
                 E+  +  S  AK +   LLT +P  R       A  +  HP
Sbjct: 216 RVKEDQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHP 262

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 87.7 bits (217), Expect = 5e-19
 Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 9/215 (4%)

Query: 89  LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVI 148
           +V ++++     HP +  LY  ++ +  +  ++E  +GG+L   I +  ++    A    
Sbjct: 43  MVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNGGDLMFHIQSCHKFDLPRATFYA 102

Query: 149 RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF-GS 207
            +I  GL  LH   IV+RDLK +N L      D  +KI DFG+       D     F G+
Sbjct: 103 AEIICGLQFLHSKGIVYRDLKLDNILL---DTDGHIKIADFGMCKENMLGDAKTCTFCGT 159

Query: 208 IDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQT 267
            DY++PE LL  +  +  D WS GV+LY +L G  PF      +  Q I       Y + 
Sbjct: 160 PDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDN-PCYPR- 217

Query: 268 WKNISSSAKQLISSLLTVDPNRRPSAQ-ELLNHPW 301
           W  ++  AK ++  L   +P RR   + ++  HP+
Sbjct: 218 W--LTREAKDILVKLFVREPERRLGVKGDIRQHPF 250

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 87.3 bits (217), Expect = 5e-19
 Identities = 64/264 (24%), Positives = 101/264 (38%), Gaps = 72/264 (27%)

Query: 101 HPNVIDLYDVY-EDQNG-VHLILELCSGGELFD-----------RIVAQERYMEVGAAAV 147
           H NV+ L +V+ E  +  V+L+ +        D           + V+    M     ++
Sbjct: 61  HENVVSLVEVFLEHADKSVYLLFDYAE----HDLWQIIKFHRQAKRVSIPPSM---VKSL 113

Query: 148 IRQIAEGLAALHQANIVHRDLKPENCLFLND-REDSPLKIMDFGLSSVEGYTDPVVGLFG 206
           + QI  G+  LH   ++HRDLKP N L + +  E   +KI D GL+ +  +  P+  L  
Sbjct: 114 LWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARL--FNAPLKPLAD 171

Query: 207 S------IDYVSPEALLQDR-ITSKSDMWSLGVILYILLSGYPPF------IAQSN---- 249
                  I Y +PE LL  R  T   D+W++G I   LL+  P F      I +SN    
Sbjct: 172 LDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQR 231

Query: 250 ---------------------------RQKQQMIMAGEFSF-----YEQTWKNISSSAKQ 277
                                          +      +       + +  K   S    
Sbjct: 232 DQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFD 291

Query: 278 LISSLLTVDPNRRPSAQELLNHPW 301
           L+  LL  DP +R +A+E L HP+
Sbjct: 292 LLRKLLEYDPTKRITAEEALEHPY 315

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 86.2 bits (214), Expect = 8e-19
 Identities = 66/280 (23%), Positives = 109/280 (38%), Gaps = 78/280 (27%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETN---QVAIKTLRRIGSTTPYGFPGSRGSSSSS 66
           ++  +   LG+G F +V  G+ K   +     +VAIKT+             +  +S   
Sbjct: 6   EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTV-------------NENASMRE 52

Query: 67  QIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSG 126
           +I F               NE  VM++         +V+ L  V        +++EL + 
Sbjct: 53  RIEFL--------------NEASVMKEF-----NCHHVVRLLGVVSTGQPTLVVMELMAK 93

Query: 127 GEL----------------FDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKP 170
           G+L                      Q+            +IA+G+A L     VHRDL  
Sbjct: 94  GDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAA------EIADGMAYLAAKKFVHRDLAA 147

Query: 171 ENCLFLNDREDSPLKIMDFGLSSVEGYTD----------PVVGLFGSIDYVSPEALLQDR 220
            NC+     ED  +KI DFG++     TD          PV        +++PE+L    
Sbjct: 148 RNCMV---AEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPV-------RWMAPESLKDGV 197

Query: 221 ITSKSDMWSLGVILY-ILLSGYPPFIAQSNRQKQQMIMAG 259
            T+KSD+WS GV+L+ +      P+   SN +  + ++ G
Sbjct: 198 FTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDG 237

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 85.4 bits (212), Expect = 1e-18
 Identities = 65/236 (27%), Positives = 108/236 (45%), Gaps = 18/236 (7%)

Query: 75  KQVSVSD----ALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELF 130
           K + +       ++  EI ++++       HPN++  +  Y  ++ + +++E C GG L 
Sbjct: 34  KVIKLEPGDDFEIIQQEISMLKECR-----HPNIVAYFGSYLRRDKLWIVMEYCGGGSLQ 88

Query: 131 DRI-VAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDF 189
           D   V +    E+  A V R+  +GLA LH+   +HRD+K  N L L +  D  +K+ DF
Sbjct: 89  DIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANIL-LTEDGD--VKLADF 145

Query: 190 GLSSVEGYTDPVVGLF-GSIDYVSPEAL---LQDRITSKSDMWSLGVILYILLSGYPPFI 245
           G+S+    T      F G+  +++PE      +     K D+W+LG+    L    PP  
Sbjct: 146 GVSAQLTATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMF 205

Query: 246 AQSNRQKQQMIMAGEFSFYEQTWKNI-SSSAKQLISSLLTVDPNRRPSAQELLNHP 300
                +   +I    F   +   K   S      I   LT DP +RP+A +LL HP
Sbjct: 206 DLHPMRALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHP 261

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 87.6 bits (217), Expect = 1e-18
 Identities = 60/244 (24%), Positives = 108/244 (44%), Gaps = 49/244 (20%)

Query: 104 VIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANI 163
           V+ LY  ++D++ ++ +++   GG++   ++    + E  A   I ++   + ++H+   
Sbjct: 63  VVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGF 122

Query: 164 VHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYT-------------------DPVVG- 203
           +HRD+KP+N L   DR D  +K+ DFGL +   +T                         
Sbjct: 123 IHRDIKPDNILI--DR-DGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSE 179

Query: 204 ------------------------LFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS 239
                                   L G+ +Y++PE LL+   T   D WS+GVILY +L 
Sbjct: 180 IDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLV 239

Query: 240 GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNR--RPSAQELL 297
           G PPF+A +  + Q  ++  E + +  +   +S  A  LI  L     +R  +  A E+ 
Sbjct: 240 GQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLCCGAEDRLGKNGADEIK 299

Query: 298 NHPW 301
            HP+
Sbjct: 300 AHPF 303

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 85.6 bits (212), Expect = 1e-18
 Identities = 84/326 (25%), Positives = 133/326 (40%), Gaps = 92/326 (28%)

Query: 18  LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQV 77
           +G G + VV +   K  GE   VA+K +R    T   G P       S+ I         
Sbjct: 8   IGEGTYGVVYKARNKLTGEV--VALKKIRL--DTETEGVP-------STAI--------- 47

Query: 78  SVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE 137
                    EI +++++      HPN++ L DV   +N ++L+ E             Q+
Sbjct: 48  --------REISLLKEL-----NHPNIVKLLDVIHTENKLYLVFEFLH----------QD 84

Query: 138 --RYMEVGAAAVIR---------QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKI 186
             ++M+    + I          Q+ +GLA  H   ++HRDLKP+N L      +  +K+
Sbjct: 85  LKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKL 141

Query: 187 MDFGLSS-----VEGYTDPVVGLFGSIDYVSPEALLQDRITSKS-DMWSLGVILYILLSG 240
            DFGL+      V  YT  VV L+    Y +PE LL  +  S + D+WSLG I   +++ 
Sbjct: 142 ADFGLARAFGVPVRTYTHEVVTLW----YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR 197

Query: 241 YPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS-------------------------SA 275
              F   S   +   I     +  E  W  ++S                           
Sbjct: 198 RALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDG 257

Query: 276 KQLISSLLTVDPNRRPSAQELLNHPW 301
           + L+S +L  DPN+R SA+  L HP+
Sbjct: 258 RDLLSQMLHYDPNKRISAKAALAHPF 283

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 86.2 bits (213), Expect = 1e-18
 Identities = 58/205 (28%), Positives = 103/205 (50%), Gaps = 12/205 (5%)

Query: 89  LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVI 148
           +V ++++      P +  L+  ++  + ++ ++E  +GG+L   I    ++ E  A    
Sbjct: 48  MVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYA 107

Query: 149 RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGL---SSVEGYTDPVVGLF 205
            +I+ GL  LH+  I++RDLK +N +   D E   +KI DFG+     V+G T       
Sbjct: 108 AEISVGLFFLHRRGIIYRDLKLDNVML--DSEGH-IKIADFGMCKEHMVDGVTTRT--FC 162

Query: 206 GSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYE 265
           G+ DY++PE +         D W+ GV+LY +L+G PPF  +   +  Q IM    S+  
Sbjct: 163 GTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYP- 221

Query: 266 QTWKNISSSAKQLISSLLTVDPNRR 290
              K++S  A  +   L+T  P++R
Sbjct: 222 ---KSLSKEAVSICKGLMTKHPSKR 243

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 86.8 bits (215), Expect = 2e-18
 Identities = 62/212 (29%), Positives = 95/212 (44%), Gaps = 12/212 (5%)

Query: 102 PNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQA 161
             ++ L+  ++D   +++++E   GG+L + +++     E  A     ++   L A+H  
Sbjct: 103 EWIVQLHYAFQDDKYLYMVMEYMPGGDLVN-LMSNYDIPEKWARFYTAEVVLALDAIHSM 161

Query: 162 NIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVG--LFGSIDYVSPEALLQD 219
             +HRD+KP+N L   D+    LK+ DFG          V      G+ DY+SPE L   
Sbjct: 162 GFIHRDVKPDNMLL--DK-SGHLKLADFGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQ 218

Query: 220 RITS----KSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSA 275
                   + D WS+GV LY +L G  PF A S       IM  + S        IS  A
Sbjct: 219 GGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDDIEISKQA 278

Query: 276 KQLISSLLTVDPNR--RPSAQELLNHPWVIGD 305
           K LI + LT    R  R    E+ +HP+   D
Sbjct: 279 KDLICAFLTDREVRLGRNGVDEIKSHPFFKND 310

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 84.7 bits (209), Expect = 2e-18
 Identities = 63/228 (27%), Positives = 104/228 (45%), Gaps = 40/228 (17%)

Query: 84  LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVG 143
           L  + L   +I++  S HPN++ L  V   +  +++++EL  GG+    +  +   ++V 
Sbjct: 36  LKAKFLQEARILKQYS-HPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGPRLKVK 94

Query: 144 A-AAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVV 202
               ++   A G+  L   + +HRDL   NCL     E + LKI DFG+S  E   D V 
Sbjct: 95  ELIQMVENAAAGMEYLESKHCIHRDLAARNCLV---TEKNVLKISDFGMSREE--EDGVY 149

Query: 203 GLFGS-----IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMI 256
              G      + + +PEAL   R +S+SD+WS G++L+   S G  P+   SN+Q ++ I
Sbjct: 150 ASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAI 209

Query: 257 MAGE------------FSFYEQTWKNISSSAKQLISSLLTVDPNRRPS 292
             G             +   E+ W+                DP +RPS
Sbjct: 210 EQGVRLPCPELCPDAVYRLMERCWE---------------YDPGQRPS 242

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 86.0 bits (213), Expect = 2e-18
 Identities = 90/359 (25%), Positives = 151/359 (42%), Gaps = 81/359 (22%)

Query: 12  YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFF 71
           Y++ +++G+G + VV   I    GE  +VAIK +  +                       
Sbjct: 2   YKIQEVIGKGSYGVVCSAIDTHTGE--KVAIKKINDVFE--------------------- 38

Query: 72  PTRKQVSVSDAL-LTNEILVMRKIVENVSPHPNVIDLYDVY-----EDQNGVHLILELCS 125
                  VSDA  +  EI ++R     +  HP+++++  +       +   ++++ EL  
Sbjct: 39  ------HVSDATRILREIKLLR-----LLRHPDIVEIKHIMLPPSRREFKDIYVVFELM- 86

Query: 126 GGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLK 185
             +L   I A +          + Q+   L  +H AN+ HRDLKP+N L      D  LK
Sbjct: 87  ESDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNIL---ANADCKLK 143

Query: 186 IMDFGLSSVEGYTDPVVGLFGSIDYV------SPE--ALLQDRITSKSDMWSLGVILYIL 237
           I DFGL+ V  + D    +F + DYV      +PE       + T   D+WS+G I   +
Sbjct: 144 ICDFGLARV-AFNDTPTAIFWT-DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEV 201

Query: 238 LSGYPPFIAQSNRQKQQMI--MAGEFSF-------------------------YEQTWKN 270
           L+G P F  ++   +  +I  + G  S                          + Q + N
Sbjct: 202 LTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPN 261

Query: 271 ISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAKEEEMDAEIVSRLQSFNARRKL 329
               A +L+  LL  DP  RP+A+E L  P+  G +  E E  A+ +++L+    RR+L
Sbjct: 262 ADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAKVEREPSAQPITKLEFEFERRRL 320

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 84.7 bits (209), Expect = 3e-18
 Identities = 65/235 (27%), Positives = 110/235 (46%), Gaps = 33/235 (14%)

Query: 102 PNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQA 161
           P V   Y  Y     + +I+E   GG   D + A   + E   A ++++I +GL  LH  
Sbjct: 62  PYVTKYYGSYLKGTKLWIIMEYLGGGSALDLLRAGP-FDEFQIATMLKEILKGLDYLHSE 120

Query: 162 NIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVG---LFGSIDYVSPEALLQ 218
             +HRD+K  N L     E   +K+ DFG++     TD  +      G+  +++PE + Q
Sbjct: 121 KKIHRDIKAANVLL---SEQGDVKLADFGVAG--QLTDTQIKRNTFVGTPFWMAPEVIQQ 175

Query: 219 DRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMI----------MAGEFSFYEQTW 268
               SK+D+WSLG+    L  G PP    S+    +++          + GEF       
Sbjct: 176 SAYDSKADIWSLGITAIELAKGEPP---NSDMHPMRVLFLIPKNNPPTLTGEF------- 225

Query: 269 KNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAKEEEMDAEIVSRLQSF 323
              S   K+ I + L  DP+ RP+A+ELL H +++ ++ K   +  E++ R + +
Sbjct: 226 ---SKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKNAKKTSYL-TELIDRFKRW 276

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 84.4 bits (208), Expect = 3e-18
 Identities = 61/223 (27%), Positives = 104/223 (46%), Gaps = 9/223 (4%)

Query: 102 PNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQA 161
           P V   Y  Y     + +I+E   GG   D ++      E   A ++R+I +GL  LH  
Sbjct: 62  PYVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSE 120

Query: 162 NIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF-GSIDYVSPEALLQDR 220
             +HRD+K  N L     E   +K+ DFG++     T      F G+  +++PE + Q  
Sbjct: 121 KKIHRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSA 177

Query: 221 ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLIS 280
             SK+D+WSLG+    L  G PP    S     +++     +       N S   K+ + 
Sbjct: 178 YDSKADIWSLGITAIELAKGEPP---HSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVE 234

Query: 281 SLLTVDPNRRPSAQELLNHPWVIGDSAKEEEMDAEIVSRLQSF 323
           + L  +P+ RP+A+ELL H +++  + K   +  E++ R + +
Sbjct: 235 ACLNKEPSFRPTAKELLKHKFIVRFAKKTSYL-TELIDRYKRW 276

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score = 86.2 bits (213), Expect = 3e-18
 Identities = 69/279 (24%), Positives = 124/279 (44%), Gaps = 55/279 (19%)

Query: 75  KQVSVSDALLTNEILVMRKIVENVSPHPN--VIDLYDVYEDQNGVHLILELCSGGELFDR 132
           K +   D LL N++  ++   + ++   N  V+ LY  ++D++ ++ +++   GG++   
Sbjct: 32  KTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSL 91

Query: 133 IVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS 192
           ++    + E  A   I ++   + ++H+   +HRD+KP+N L   DR D  +K+ DFGL 
Sbjct: 92  LIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILI--DR-DGHIKLTDFGLC 148

Query: 193 SVEGYT------------------------DP------------------------VVGL 204
           +   +T                        DP                           L
Sbjct: 149 TGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSL 208

Query: 205 FGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFY 264
            G+ +Y++PE LL+   T   D WS+GVILY +L G PPF+AQ+  + Q  ++  + S +
Sbjct: 209 VGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLH 268

Query: 265 EQTWKNISSSAKQLISSLLTVDPNR--RPSAQELLNHPW 301
                 +S  A  LI  L     +R  +  A E+  HP+
Sbjct: 269 IPPQAKLSPEASDLIIKLCRGPEDRLGKNGADEIKAHPF 307

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 84.4 bits (209), Expect = 4e-18
 Identities = 73/269 (27%), Positives = 115/269 (42%), Gaps = 60/269 (22%)

Query: 85  TNEILVMRKI-------------VENVS-----PHPNVIDLYDVYEDQNGVHLILELCSG 126
           T +I+ M+KI             +  +S      HPN++ L DV   ++ ++LI E  S 
Sbjct: 24  TGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFLSM 83

Query: 127 G--ELFDRIVAQERYMEVG-AAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSP 183
              +  D +   + YM+     + + QI +G+   H   ++HRDLKP+N L  N      
Sbjct: 84  DLKKYLDSLPKGQ-YMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDN---KGV 139

Query: 184 LKIMDFGLSSVEG-----YTDPVVGLFGSIDYVSPEALL-QDRITSKSDMWSLGVILYIL 237
           +K+ DFGL+   G     YT  VV L+    Y +PE LL   R ++  D+WS+G I   +
Sbjct: 140 IKLADFGLARAFGIPVRVYTHEVVTLW----YRAPEVLLGSPRYSTPVDIWSIGTIFAEM 195

Query: 238 LSGYPPFIAQSNRQKQQMIMAGEFSFYEQTW-------------------------KNIS 272
            +  P F   S   +   I     +  E  W                         KN+ 
Sbjct: 196 ATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLD 255

Query: 273 SSAKQLISSLLTVDPNRRPSAQELLNHPW 301
                L+  +L  DP +R SA++ LNHP+
Sbjct: 256 EDGLDLLEKMLIYDPAKRISAKKALNHPY 284

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 85.2 bits (211), Expect = 4e-18
 Identities = 65/214 (30%), Positives = 109/214 (50%), Gaps = 18/214 (8%)

Query: 104 VIDLYDVYEDQNGVHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQAN 162
           + +L+  ++D+N ++L+++   GG+L   +   ++R  E  A   + ++   + ++HQ  
Sbjct: 63  ITNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLG 122

Query: 163 IVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVG---LFGSIDYVSPEAL--L 217
            VHRD+KP+N L   D+    +++ DFG S +    D  V      G+ DY+SPE L  +
Sbjct: 123 YVHRDIKPDNVLL--DKNGH-IRLADFG-SCLRLLADGTVQSNVAVGTPDYISPEILQAM 178

Query: 218 QD---RITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGE--FSFYEQTWKNIS 272
           +D   R   + D WSLGV +Y +L G  PF A+S  +    IM  +  F F      ++S
Sbjct: 179 EDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDV-TDVS 237

Query: 273 SSAKQLISSLLTVDPNR--RPSAQELLNHPWVIG 304
             AK LI  L+     R  R   Q+  +HP+  G
Sbjct: 238 EEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEG 271

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 84.3 bits (208), Expect = 4e-18
 Identities = 68/223 (30%), Positives = 111/223 (49%), Gaps = 12/223 (5%)

Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYM-EVGAAAVIRQIAEGLAALH 159
           HPN++ L D +  +N + +++E C+GG +   ++  ER + E     V +Q  E L  LH
Sbjct: 61  HPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLH 120

Query: 160 QANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF-GSIDYVSPEALL- 217
           +  I+HRDLK  N LF  D +   +K+ DFG+S+    T      F G+  +++PE ++ 
Sbjct: 121 ENKIIHRDLKAGNILFTLDGD---IKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMC 177

Query: 218 ---QDR-ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
              +DR    K+D+WSLG+ L  +    PP    +  +    I   E     Q  +  SS
Sbjct: 178 ETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSR-WSS 236

Query: 274 SAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAKE-EEMDAE 315
             K  +   L  + + R +  +LL HP+V  +S K   E+ AE
Sbjct: 237 EFKDFLKKCLEKNVDARWTTTQLLQHPFVTVNSNKPIRELIAE 279

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 84.7 bits (210), Expect = 4e-18
 Identities = 72/287 (25%), Positives = 118/287 (41%), Gaps = 71/287 (24%)

Query: 73  TRKQVSVSDALLTNE-----ILVMR--KIVENVSPHPNVIDLYDV--------YEDQNGV 117
           T++ V++   L+ NE     I  +R  KI++ +  H NV++L ++           +   
Sbjct: 36  TKQIVALKKVLMENEKEGFPITALREIKILQLLK-HENVVNLIEICRTKATPYNRYKGSF 94

Query: 118 HLILELCS---GGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCL 174
           +L+ E C     G L ++ V   ++       V++ +  GL  +H+  I+HRD+K  N L
Sbjct: 95  YLVFEFCEHDLAGLLSNKNV---KFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANIL 151

Query: 175 FLNDREDSPLKIMDFGLSSV---------EGYTDPVVGLFGSIDYVSPEALLQDRITSKS 225
                +D  LK+ DFGL+             YT+ VV L+    Y  PE LL +R     
Sbjct: 152 I---TKDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLW----YRPPELLLGERDYGPP 204

Query: 226 -DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEF--SFYEQTWKNI----------- 271
            DMW  G I+  + +  P  I Q N ++ Q+ +  +   S   + W  +           
Sbjct: 205 IDMWGAGCIMAEMWTRSP--IMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMEL 262

Query: 272 -----------------SSSAKQLISSLLTVDPNRRPSAQELLNHPW 301
                               A  LI  LL +DP +R  A   LNH +
Sbjct: 263 PQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDF 309

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 85.5 bits (211), Expect = 4e-18
 Identities = 74/307 (24%), Positives = 129/307 (42%), Gaps = 73/307 (23%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
           +++E   ++GRG F  VR   KK  G     A+K LR+                   Q+G
Sbjct: 1   EDFESLKVIGRGAFGEVRLVQKKDTGHV--YAMKILRKADML------------EKEQVG 46

Query: 70  FFPTRKQVSV-SDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
                + + V +D+L                    V+ ++  ++D+  ++LI+E   GG+
Sbjct: 47  HIRAERDILVEADSLW-------------------VVKMFYSFQDKLNLYLIMEFLPGGD 87

Query: 129 LFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMD 188
           +   ++ ++   E      I +    + ++HQ   +HRD+KP+N L L+ +    +K+ D
Sbjct: 88  MMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDN-LLLDSK--GHVKLSD 144

Query: 189 FGLSS-------VEGYTD-----PVVGLF------------------------GSIDYVS 212
           FGL +        E Y +     P    F                        G+ DY++
Sbjct: 145 FGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIA 204

Query: 213 PEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNIS 272
           PE  +Q       D WSLGVI+Y +L GYPPF +++ ++  + +M  + +        IS
Sbjct: 205 PEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLIFPPEVPIS 264

Query: 273 SSAKQLI 279
             AK LI
Sbjct: 265 EKAKDLI 271

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 83.8 bits (207), Expect = 5e-18
 Identities = 61/244 (25%), Positives = 113/244 (46%), Gaps = 24/244 (9%)

Query: 75  KQVSVSDALLTNEILVM----RKIVENVS-----PHPNVIDLYDVYEDQNGVHLILELCS 125
           KQV     L T+ +L       K+ E V       H N++       D N + + +E   
Sbjct: 30  KQV----ELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFMEFVP 85

Query: 126 GGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLK 185
           GG +   +       E       +QI +G+A LH   +VHRD+K  N + +    +  +K
Sbjct: 86  GGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLM---PNGIIK 142

Query: 186 IMDFGLS------SVEG-YTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILL 238
           ++DFG +       + G +++ +  + G+  +++PE + +     KSD+WS+G  ++ + 
Sbjct: 143 LIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMA 202

Query: 239 SGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN 298
           +G PP  A  +R      +        +   + S++A   ++S LT D + RPSA +LL 
Sbjct: 203 TGKPPL-ASMDRLAAMFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261

Query: 299 HPWV 302
           H ++
Sbjct: 262 HDFL 265

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 84.7 bits (209), Expect = 5e-18
 Identities = 56/203 (27%), Positives = 99/203 (48%), Gaps = 8/203 (3%)

Query: 89  LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVI 148
           +V ++++      P +  L+  ++  + ++ ++E  +GG+L  +I    R+ E  A    
Sbjct: 48  MVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYA 107

Query: 149 RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF-GS 207
            +IA GL  LH   I++RDLK +N +   D E   +KI DFG+     +       F G+
Sbjct: 108 AEIAIGLFFLHSKGIIYRDLKLDNVML--DSEGH-IKIADFGMCKENMWDGVTTKTFCGT 164

Query: 208 IDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQT 267
            DY++PE +         D W+ GV+LY +L+G  PF  +   +  Q IM    ++    
Sbjct: 165 PDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYP--- 221

Query: 268 WKNISSSAKQLISSLLTVDPNRR 290
            K++S  A  +   L+T  P +R
Sbjct: 222 -KSMSKEAVAICKGLMTKHPGKR 243

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 83.5 bits (206), Expect = 5e-18
 Identities = 62/203 (30%), Positives = 103/203 (50%), Gaps = 15/203 (7%)

Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ--ERYMEVGAAAVIRQIAEGLAAL 158
           HPN++   + +E    +++++E C GG+L  +I  Q  + + E        Q+  G+  +
Sbjct: 57  HPNIVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHI 116

Query: 159 HQANIVHRDLKPENCLFLNDREDSPLKIMDFG----LSSVEGYTDPVVGLFGSIDYVSPE 214
           H+  ++HRD+K +N +FL   ++  +K+ DFG    L+S   Y    VG   +  YV PE
Sbjct: 117 HEKRVLHRDIKSKN-IFLT--QNGKVKLGDFGSARLLTSPGAYACTYVG---TPYYVPPE 170

Query: 215 ALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSS 274
                   +KSD+WSLG ILY L +   PF  Q+N  K  ++   + S Y+    + S  
Sbjct: 171 IWENMPYNNKSDIWSLGCILYELCTLKHPF--QANSWKNLILKVCQGS-YKPLPSHYSYE 227

Query: 275 AKQLISSLLTVDPNRRPSAQELL 297
            + LI  +   +P  RPSA  +L
Sbjct: 228 LRSLIKQMFKRNPRSRPSATTIL 250

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 83.5 bits (206), Expect = 5e-18
 Identities = 52/170 (30%), Positives = 90/170 (52%), Gaps = 21/170 (12%)

Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIR---QIAEGLAA 157
           HPN++ L  V   +  +++++EL  GG+    +  +++  E+    +++     A G+A 
Sbjct: 51  HPNIVKLIGVCTQRQPIYIVMELVPGGDFLSFL--RKKKDELKTKQLVKFALDAAAGMAY 108

Query: 158 LHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGS-------IDY 210
           L   N +HRDL   NCL     E++ LKI DFG+S  E       G++ S       I +
Sbjct: 109 LESKNCIHRDLAARNCLV---GENNVLKISDFGMSRQEDD-----GIYSSSGLKQIPIKW 160

Query: 211 VSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAG 259
            +PEAL   R +S+SD+WS G++L+   S G  P+   +N+Q ++ +  G
Sbjct: 161 TAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKG 210

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 83.4 bits (206), Expect = 5e-18
 Identities = 72/289 (24%), Positives = 122/289 (42%), Gaps = 57/289 (19%)

Query: 18  LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQV 77
           LG G F VV  G  +      +VAIK +                              + 
Sbjct: 12  LGSGQFGVVHLGKWRA---QIKVAIKAIN-----------------------------EG 39

Query: 78  SVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE 137
           ++S+     E  VM K+      HP ++ LY V   Q  ++++ E    G L + +  ++
Sbjct: 40  AMSEEDFIEEAKVMMKLS-----HPKLVQLYGVCTQQKPLYIVTEFMENGCLLNYL--RQ 92

Query: 138 RYMEVGAA---AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV 194
           R  ++      ++ + + EG+  L + + +HRDL   NCL         +K+ DFG++  
Sbjct: 93  RQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLV---SSTGVVKVSDFGMTR- 148

Query: 195 EGYT--DPVVGLFGS---IDYVSPEALLQDRITSKSDMWSLGVILY-ILLSGYPPFIAQS 248
             Y   D      G+   + +  PE     + +SKSD+WS GV+++ +   G  PF  +S
Sbjct: 149 --YVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKS 206

Query: 249 NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELL 297
           N +  +MI  G F  Y    K  S +  +++ S     P  RP+  ELL
Sbjct: 207 NYEVVEMISRG-FRLYRP--KLASMTVYEVMYSCWHEKPEGRPTFAELL 252

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 83.4 bits (206), Expect = 6e-18
 Identities = 57/241 (23%), Positives = 107/241 (44%), Gaps = 21/241 (8%)

Query: 75  KQVSVSDALLTNEILVMRKIVENVS-----PHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
           KQV+      + +  V+  + + +       HP++I +     + +  +L +E  +GG +
Sbjct: 31  KQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLFVEWMAGGSV 90

Query: 130 FDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDF 189
              +     + E        Q+  GL+ LH+  I+HRD+K  N L   D     L+I DF
Sbjct: 91  SHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLI--DSTGQRLRIADF 148

Query: 190 GLSSVEGYTDPVVGLF-----GSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF 244
           G ++         G F     G+I +++PE L  ++     D+WS+G ++  + +  PP+
Sbjct: 149 GAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPW 208

Query: 245 IAQSNRQKQQMIMAGEFSFYEQTW-----KNISSSAKQLISSLLTVDPNRRPSAQELLNH 299
            A+ +     +I    F     T      +++S   + +    L + P  RP ++ELL H
Sbjct: 209 NAEKHSNHLALI----FKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKH 264

Query: 300 P 300
           P
Sbjct: 265 P 265

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 84.7 bits (209), Expect = 7e-18
 Identities = 77/260 (29%), Positives = 117/260 (45%), Gaps = 43/260 (16%)

Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      E+ N V+L+  L   G   + IV  ++  +     +I QI  G
Sbjct: 75  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 132

Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A+I+HRDLKP N   L   ED  LKI+DFGL+      D + G   +  Y +PE
Sbjct: 133 LKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 187

Query: 215 ALLQ-DRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
            +L         D+WS+G I+  LL+G   F    +  + ++I+    +   +  K ISS
Sbjct: 188 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 247

Query: 274 -SAKQLISSL--------------------------LTVDPNRRPSAQELLNHPWVIGDS 306
            SA+  I SL                          L +D ++R +A + L H +     
Sbjct: 248 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 307

Query: 307 AKEEEMDAEIVSRLQSFNAR 326
             ++E  A+     QSF +R
Sbjct: 308 DPDDEPVADPYD--QSFESR 325

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 84.5 bits (209), Expect = 7e-18
 Identities = 67/234 (28%), Positives = 104/234 (44%), Gaps = 44/234 (18%)

Query: 101 HPNVIDLYDVY----EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLA 156
           H N+I L D++    ED   ++ + EL   G    R++      +      + QI  GL 
Sbjct: 68  HENIISLSDIFISPLED---IYFVTELL--GTDLHRLLTSRPLEKQFIQYFLYQILRGLK 122

Query: 157 ALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP-VVGLFGSIDYVSPEA 215
            +H A +VHRDLKP N L     E+  LKI DFGL+ ++   DP + G   +  Y +PE 
Sbjct: 123 YVHSAGVVHRDLKPSNILI---NENCDLKICDFGLARIQ---DPQMTGYVSTRYYRAPEI 176

Query: 216 LLQ-DRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMI--------------MAGE 260
           +L   +   + D+WS G I   +L G P F  + +  +  +I              +  E
Sbjct: 177 MLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSE 236

Query: 261 FSF-------------YEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPW 301
            +              + + +KN   SA  L+  +L  DP +R SA E L HP+
Sbjct: 237 NTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPY 290

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 83.6 bits (207), Expect = 9e-18
 Identities = 69/244 (28%), Positives = 110/244 (45%), Gaps = 58/244 (23%)

Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAV----IR----QIA 152
           H N++ L+D+   +  + L+ E        D  + Q  YM+     +    +R    Q+ 
Sbjct: 62  HANIVTLHDIIHTKKTLTLVFEYL------DTDLKQ--YMDDCGGGLSMHNVRLFLFQLL 113

Query: 153 EGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS---SV--EGYTDPVVGLFGS 207
            GLA  HQ  ++HRDLKP+N L +++R +  LK+ DFGL+   SV  + Y++ VV L+  
Sbjct: 114 RGLAYCHQRRVLHRDLKPQN-LLISERGE--LKLADFGLARAKSVPSKTYSNEVVTLW-- 168

Query: 208 IDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQ-QMIMAGEFSFYE 265
             Y  P+ LL     S S DMW +G I Y + +G P F   ++ + Q   I     +  E
Sbjct: 169 --YRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTE 226

Query: 266 QTWKNISS----------------------------SAKQLISSLLTVDPNRRPSAQELL 297
           +TW  +SS                              ++L    L  +P +R SA E +
Sbjct: 227 ETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAM 286

Query: 298 NHPW 301
            HP+
Sbjct: 287 KHPY 290

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional

 Score = 84.5 bits (209), Expect = 9e-18
 Identities = 67/249 (26%), Positives = 116/249 (46%), Gaps = 48/249 (19%)

Query: 94  IVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAA-AVIRQIA 152
           +++NV+ HP+VI + D         ++L   S  +L+  +  + R + +  A  + +QI 
Sbjct: 110 LLQNVN-HPSVIRMKDTLVSGAITCMVLPHYSS-DLYTYLTKRSRPLPIDQALIIEKQIL 167

Query: 153 EGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVS 212
           EGL  LH   I+HRD+K EN +F+ND  D  + I D G +         +GL G+++  +
Sbjct: 168 EGLRYLHAQRIIHRDVKTEN-IFIND-VDQ-VCIGDLGAAQFPVVAPAFLGLAGTVETNA 224

Query: 213 PEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQ------------SNRQKQQMI---- 256
           PE L +D+  SK+D+WS G++L+ +L+ YP  I +             +    ++I    
Sbjct: 225 PEVLARDKYNSKADIWSAGIVLFEMLA-YPSTIFEDPPSTPEEYVKSCHSHLLKIISTLK 283

Query: 257 -------------MAGEFSFYEQTWK------------NISSSAKQLISSLLTVDPNRRP 291
                        +   F  Y    +            N+    + L+  +LT D   RP
Sbjct: 284 VHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRP 343

Query: 292 SAQELLNHP 300
           SA+E+LN+P
Sbjct: 344 SAEEILNYP 352

Length = 357

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 84.4 bits (209), Expect = 1e-17
 Identities = 61/187 (32%), Positives = 82/187 (43%), Gaps = 42/187 (22%)

Query: 150 QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGY------TDPVVG 203
           QI  GL  LH A I+HRD+KP N L +N   +  LKI DFGL+ VE        T  VV 
Sbjct: 111 QILRGLKYLHSAGILHRDIKPGN-LLVNS--NCVLKICDFGLARVEEPDESKHMTQEVVT 167

Query: 204 LFGSIDYVSPEALLQDR-ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMI------ 256
            +    Y +PE L+  R  TS  D+WS+G I   LL     F AQS  Q+  +I      
Sbjct: 168 QY----YRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGT 223

Query: 257 --MAGEFSFYEQTWKNISSSAKQ--------------------LISSLLTVDPNRRPSAQ 294
             +    S  E    +I     +                    L+  +L  DP++R SA 
Sbjct: 224 PSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAA 283

Query: 295 ELLNHPW 301
           + L HP+
Sbjct: 284 DALAHPY 290

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 82.2 bits (203), Expect = 2e-17
 Identities = 69/246 (28%), Positives = 107/246 (43%), Gaps = 53/246 (21%)

Query: 11  EYEVTDI-----LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSS 65
           E E TDI     LG G +  V  G+ K    T  VA+KTL+                   
Sbjct: 2   EMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--VAVKTLKE------------------ 41

Query: 66  SQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCS 125
                          D +   E L    +++ +  HPN++ L  V   +   ++I E  +
Sbjct: 42  ---------------DTMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMT 85

Query: 126 GGELFDRIVAQERYMEVGAAAVIR---QIAEGLAALHQANIVHRDLKPENCLFLNDREDS 182
            G L D +    R  EV A  ++    QI+  +  L + N +HRDL   NCL     E+ 
Sbjct: 86  YGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENH 141

Query: 183 PLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILL 238
            +K+ DFGLS +   + YT      F  I + +PE+L  ++ + KSD+W+ GV+L+ I  
Sbjct: 142 LVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 200

Query: 239 SGYPPF 244
            G  P+
Sbjct: 201 YGMSPY 206

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 82.9 bits (205), Expect = 2e-17
 Identities = 85/348 (24%), Positives = 142/348 (40%), Gaps = 107/348 (30%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
           D++++   +G G +  V +   K  GE   VA+K +R        GFP +          
Sbjct: 7   DKFDIIGQIGEGTYGQVYKARDKDTGE--LVALKKVRL--DNEKEGFPITA--------- 53

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVY----------EDQNGVHL 119
                            EI ++R++      H N+++L ++           +D+   +L
Sbjct: 54  ---------------IREIKILRQLN-----HRNIVNLKEIVTDKQDALDFKKDKGAFYL 93

Query: 120 ILELCSG---GELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFL 176
           + E       G L   +V    + E    + ++Q+ EGL   H+ N +HRD+K  N L  
Sbjct: 94  VFEYMDHDLMGLLESGLV---HFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLN 150

Query: 177 NDREDSPLKIMDFGLS------SVEGYTDPVVGLFGSIDYVSPEALL-QDRITSKSDMWS 229
           N  +   +K+ DFGL+          YT+ V+ L+    Y  PE LL ++R     D+WS
Sbjct: 151 NKGQ---IKLADFGLARLYNSEESRPYTNKVITLW----YRPPELLLGEERYGPAIDVWS 203

Query: 230 LGVILYILLSGYPPFIAQSNRQKQQMIMAG------------------------------ 259
            G IL  L +  P F  Q+N++  Q+ +                                
Sbjct: 204 CGCILGELFTKKPIF--QANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYR 261

Query: 260 -----EFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
                EFSF       I + A  L+  +LT+DP++R +A+E LN PW+
Sbjct: 262 RRLREEFSF-------IPTPALDLLDHMLTLDPSKRCTAEEALNSPWL 302

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 82.9 bits (205), Expect = 2e-17
 Identities = 75/306 (24%), Positives = 128/306 (41%), Gaps = 55/306 (17%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
            +++V  ++GRG F  V+   +K  G+    A+K +++                +   + 
Sbjct: 1   KDFDVKSLVGRGHFGEVQVVREKATGDI--YAMKVMKK------------SVLLAQETVS 46

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
           FF   +           +IL +          P +  L   ++D++ ++L++E   GG+L
Sbjct: 47  FFEEER-----------DILSISN-------SPWIPQLQYAFQDKDNLYLVMEYQPGGDL 88

Query: 130 FDRIVAQERYMEVGAAAVIR----QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLK 185
              +    RY +     + +    ++   + ++HQ   VHRD+KPEN L   DR    +K
Sbjct: 89  LSLL---NRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLI--DRTGH-IK 142

Query: 186 IMDFGLSSVEGYTDPVVGLF--GSIDYVSPEALLQDRITSKS------DMWSLGVILYIL 237
           + DFG ++       V      G+ DY++PE L       K       D WSLGVI Y +
Sbjct: 143 LADFGSAARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEM 202

Query: 238 LSGYPPFIAQSNRQKQQMIMAGE--FSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQE 295
           + G  PF   ++ +    IM  +    F E     +SS    LI SLL      R   + 
Sbjct: 203 IYGRSPFHEGTSAKTYNNIMNFQRFLKFPEDP--KVSSDFLDLIQSLLC-GQKERLGYEG 259

Query: 296 LLNHPW 301
           L  HP+
Sbjct: 260 LCCHPF 265

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 83.1 bits (205), Expect = 3e-17
 Identities = 72/254 (28%), Positives = 112/254 (44%), Gaps = 51/254 (20%)

Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      +  +  +L++     G    +++  E+  E     ++ Q+ +G
Sbjct: 73  HENVIGLLDVFTPDLSLDRFHDFYLVMPFM--GTDLGKLMKHEKLSEDRIQFLVYQMLKG 130

Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGL-----SSVEGYTDPVVGLFGSID 209
           L  +H A I+HRDLKP N L +N  ED  LKI+DFGL     S + GY   VV  +    
Sbjct: 131 LKYIHAAGIIHRDLKPGN-LAVN--EDCELKILDFGLARQTDSEMTGY---VVTRW---- 180

Query: 210 YVSPEALLQ-DRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIM------AGEFS 262
           Y +PE +L     T   D+WS+G I+  +L+G P F    +  +   IM      + EF 
Sbjct: 181 YRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFV 240

Query: 263 FYEQT---------------------WKNISSSAKQLISSLLTVDPNRRPSAQELLNHPW 301
              Q+                       N +  A  ++  +L +D   R +A E L HP+
Sbjct: 241 QKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPY 300

Query: 302 VIGDSAKEEEMDAE 315
                  E+E +A 
Sbjct: 301 FEEFHDPEDETEAP 314

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 83.2 bits (205), Expect = 3e-17
 Identities = 73/255 (28%), Positives = 114/255 (44%), Gaps = 48/255 (18%)

Query: 89  LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVG---AA 145
           LV+ K V     H N+I L +V+  Q  +    ++    EL D  + Q  +ME+     +
Sbjct: 71  LVLLKCVN----HKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIHMELDHERMS 126

Query: 146 AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF 205
            ++ Q+  G+  LH A I+HRDLKP N +    + D  LKI+DFGL+        +    
Sbjct: 127 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTACTNFMMTPYV 183

Query: 206 GSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF-----IAQSNRQKQQM-IMAG 259
            +  Y +PE +L        D+WS+G I+  L+ G   F     I Q N+  +Q+   + 
Sbjct: 184 VTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSA 243

Query: 260 EF---------------------SFYE--QTW---------KNISSSAKQLISSLLTVDP 287
           EF                     SF E    W         K  +S A+ L+S +L +DP
Sbjct: 244 EFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDP 303

Query: 288 NRRPSAQELLNHPWV 302
           ++R S  E L HP++
Sbjct: 304 DKRISVDEALRHPYI 318

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 81.8 bits (202), Expect = 4e-17
 Identities = 81/332 (24%), Positives = 137/332 (41%), Gaps = 87/332 (26%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
           D+YE  + +G G + VV +   +   ET  +A+K +R        G P       S+ I 
Sbjct: 2   DQYEKVEKIGEGTYGVVYKARDRVTNET--IALKKIRL--EQEDEGVP-------STAI- 49

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
                            EI +++++      H N++ L DV   +  ++L+ E       
Sbjct: 50  ----------------REISLLKEM-----QHGNIVRLQDVVHSEKRLYLVFEYLD---- 84

Query: 130 FDRIVAQERYMEVGA---------AAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRE 180
               +  +++M+               + QI  G+A  H   ++HRDLKP+N L   DR 
Sbjct: 85  ----LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLI--DRR 138

Query: 181 DSPLKIMDFGLSS-----VEGYTDPVVGLFGSIDYVSPEALLQDRITSKS-DMWSLGVIL 234
            + LK+ DFGL+      V  +T  VV L+    Y +PE LL  R  S   D+WS+G I 
Sbjct: 139 TNALKLADFGLARAFGIPVRTFTHEVVTLW----YRAPEILLGSRHYSTPVDIWSVGCIF 194

Query: 235 YILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS--------------------- 273
             +++  P F   S   +   I     +  E+TW  ++S                     
Sbjct: 195 AEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVP 254

Query: 274 ----SAKQLISSLLTVDPNRRPSAQELLNHPW 301
               +   L+S +L +DP++R +A+  L H +
Sbjct: 255 TLEPAGVDLLSKMLRLDPSKRITARAALEHEY 286

Length = 294

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 81.3 bits (200), Expect = 4e-17
 Identities = 60/226 (26%), Positives = 105/226 (46%), Gaps = 25/226 (11%)

Query: 94  IVENVSPHPNVIDLYDVYEDQN------GVHLILELCSGGELFDRI--VAQERYMEVGAA 145
           +++  S H N+   Y  +  +N       + L++E C  G + D I         E   A
Sbjct: 55  MLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIA 114

Query: 146 AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVG-- 203
            + R+I  GL+ LHQ  ++HRD+K +N L     E++ +K++DFG+S+     D  VG  
Sbjct: 115 YICREILRGLSHLHQHKVIHRDIKGQNVLL---TENAEVKLVDFGVSA---QLDRTVGRR 168

Query: 204 --LFGSIDYVSPEALLQDRITS-----KSDMWSLGVILYILLSGYPPFIAQSNRQKQQMI 256
               G+  +++PE +  D         KSD+WSLG+    +  G PP       +   +I
Sbjct: 169 NTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI 228

Query: 257 MAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
                   +   K  S   +  I S L  + ++RP+ ++L+ HP++
Sbjct: 229 PRNPAPRLKS--KKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 81.3 bits (201), Expect = 5e-17
 Identities = 65/240 (27%), Positives = 104/240 (43%), Gaps = 52/240 (21%)

Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE--RYM----EVGAAAVIRQIAEG 154
           HPN+++L +V+  +  +HL+ E C      D  V  E  +      E     +I Q  + 
Sbjct: 59  HPNLVNLIEVFRRKRKLHLVFEYC------DHTVLNELEKNPRGVPEHLIKKIIWQTLQA 112

Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV-----EGYTDPVVGLFGSID 209
           +   H+ N +HRD+KPEN L     +   +K+ DFG + +     + YTD V   +    
Sbjct: 113 VNFCHKHNCIHRDVKPENILI---TKQGQIKLCDFGFARILTGPGDDYTDYVATRW---- 165

Query: 210 YVSPEALLQD-RITSKSDMWSLGVILYILLSGYPPFIAQSN----------------RQK 252
           Y +PE L+ D +     D+W++G +   LL+G P +  +S+                R +
Sbjct: 166 YRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQ 225

Query: 253 QQMIMAGEFSFY-----------EQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPW 301
           Q       F              E  + NISS A   +   L +DP  R S +ELL HP+
Sbjct: 226 QIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPY 285

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 83.4 bits (206), Expect = 5e-17
 Identities = 58/191 (30%), Positives = 104/191 (54%), Gaps = 13/191 (6%)

Query: 117 VHLILELCSGGELFDRIVAQER----YMEVGAAAVIRQIAEGLAALHQANIVHRDLKPEN 172
           + L+L+  + G+L   I ++ +    + E  A  +  Q+   +  +H  +++HRD+K  N
Sbjct: 114 IALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSAN 173

Query: 173 CLFLNDREDSPLKIMDFGLSSVEGYT--DPVVGLF-GSIDYVSPEALLQDRITSKSDMWS 229
            L  ++     +K+ DFG S +   T  D V   F G+  YV+PE   +   + K+DM+S
Sbjct: 174 ILLCSN---GLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFS 230

Query: 230 LGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNR 289
           LGV+LY LL+   PF  ++  +     +AG +   +    +IS   ++++++LL+ DP R
Sbjct: 231 LGVLLYELLTLKRPFDGENMEEVMHKTLAGRY---DPLPPSISPEMQEIVTALLSSDPKR 287

Query: 290 RPSAQELLNHP 300
           RPS+ +LLN P
Sbjct: 288 RPSSSKLLNMP 298

Length = 496

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 80.5 bits (199), Expect = 6e-17
 Identities = 78/291 (26%), Positives = 119/291 (40%), Gaps = 56/291 (19%)

Query: 17  ILGRGGFSVVRRGI-KKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRK 75
            +G G F  V +G+      E   VA+KT +   S                     P+ +
Sbjct: 13  CIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTS---------------------PSVR 51

Query: 76  QVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA 135
           +  + +A +      MR+       HP+++ L  V  + N V +++EL   GEL  R   
Sbjct: 52  EKFLQEAYI------MRQF-----DHPHIVKLIGVITE-NPVWIVMELAPLGEL--RSYL 97

Query: 136 QERYMEVGAAAVIR---QIAEGLAALHQANIVHRDLKPENCLFLNDREDSP--LKIMDFG 190
           Q     +  A++I    Q++  LA L     VHRD+   N L       SP  +K+ DFG
Sbjct: 98  QVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVS-----SPDCVKLGDFG 152

Query: 191 LSSV----EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILLSGYPPFI 245
           LS        Y      L   I +++PE++   R TS SD+W  GV ++ IL+ G  PF 
Sbjct: 153 LSRYLEDESYYKASKGKL--PIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQ 210

Query: 246 AQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
              N      I  GE         N   +   L++     DP++RP   EL
Sbjct: 211 GVKNNDVIGRIENGERLPMPP---NCPPTLYSLMTKCWAYDPSKRPRFTEL 258

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 80.4 bits (198), Expect = 6e-17
 Identities = 58/200 (29%), Positives = 101/200 (50%), Gaps = 14/200 (7%)

Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIR---QIAEGLAA 157
           H N++ L  V    NG+++++EL S G L + +  + R + V    +++    +AEG+  
Sbjct: 58  HKNLVRLLGVIL-HNGLYIVMELMSKGNLVNFLRTRGRAL-VSVIQLLQFSLDVAEGMEY 115

Query: 158 LHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALL 217
           L    +VHRDL   N L     ED   K+ DFGL+ V         L   + + +PEAL 
Sbjct: 116 LESKKLVHRDLAARNILV---SEDGVAKVSDFGLARVGSMGVDNSKL--PVKWTAPEALK 170

Query: 218 QDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAK 276
             + +SKSD+WS GV+L+ + S G  P+   S ++ ++ +  G   +  +  +   +   
Sbjct: 171 HKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKG---YRMEPPEGCPADVY 227

Query: 277 QLISSLLTVDPNRRPSAQEL 296
            L++S    +P +RPS  +L
Sbjct: 228 VLMTSCWETEPKKRPSFHKL 247

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 81.3 bits (200), Expect = 7e-17
 Identities = 60/207 (28%), Positives = 94/207 (45%), Gaps = 13/207 (6%)

Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HPN I+    Y  ++   L++E C G       V ++   EV  AA+     +GLA LH 
Sbjct: 84  HPNSIEYKGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHS 143

Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALL--- 217
            N++HRD+K  N L     E   +K+ DFG +S+     P     G+  +++PE +L   
Sbjct: 144 HNMIHRDIKAGNILL---TEPGQVKLADFGSASI---ASPANSFVGTPYWMAPEVILAMD 197

Query: 218 QDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQT-WKNISSSAK 276
           + +   K D+WSLG+    L    PP    +       I   E    +   W   S   +
Sbjct: 198 EGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEW---SDYFR 254

Query: 277 QLISSLLTVDPNRRPSAQELLNHPWVI 303
             + S L   P  RP+++ELL H +V+
Sbjct: 255 NFVDSCLQKIPQDRPTSEELLKHMFVL 281

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 80.6 bits (199), Expect = 8e-17
 Identities = 68/263 (25%), Positives = 108/263 (41%), Gaps = 60/263 (22%)

Query: 18  LGRGGFSVVRRG--IKKTCGETNQ-VAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTR 74
           LG G F  V +G         +   VAIKTL+               +    Q  F    
Sbjct: 13  LGEGAFGKVYKGELTGPNERLSATSVAIKTLKE-------------NAEPKVQQEFR--- 56

Query: 75  KQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIV 134
                       E  +M  +      HPN++ L  V   +    ++ E  + G+L + +V
Sbjct: 57  -----------QEAELMSDL-----QHPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLV 100

Query: 135 AQERYMEVGAAA----------------VIRQIAEGLAALHQANIVHRDLKPENCLFLND 178
               + +VGA +                +  QIA G+  L   + VHRDL   NCL    
Sbjct: 101 RNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEG 160

Query: 179 REDSPLKIMDFGLSSVEGYTDPVVGLFGS----IDYVSPEALLQDRITSKSDMWSLGVIL 234
                +KI DFGLS  + Y+     +       + ++ PEA+L  + T++SD+WS GV+L
Sbjct: 161 LT---VKISDFGLSR-DIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVL 216

Query: 235 YILLS-GYPPFIAQSNRQKQQMI 256
           + + S G  P+   SN++  +MI
Sbjct: 217 WEIFSYGLQPYYGFSNQEVIEMI 239

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 80.8 bits (199), Expect = 1e-16
 Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 8/203 (3%)

Query: 89  LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVI 148
           +V ++++     +P +  LY  ++ +  +  ++E  +GG+L   I  + R+    A    
Sbjct: 43  MVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNGGDLMFHIQDKGRFDLYRATFYA 102

Query: 149 RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF-GS 207
            +I  GL  LH   I++RDLK +N +   DR D  +KI DFG+     + D     F G+
Sbjct: 103 AEIVCGLQFLHSKGIIYRDLKLDNVML--DR-DGHIKIADFGMCKENVFGDNRASTFCGT 159

Query: 208 IDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQT 267
            DY++PE L   + T   D WS GV+LY +L G  PF      +  + I   +   Y + 
Sbjct: 160 PDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRV-DTPHYPR- 217

Query: 268 WKNISSSAKQLISSLLTVDPNRR 290
           W  I+  +K ++  L   DP RR
Sbjct: 218 W--ITKESKDILEKLFERDPTRR 238

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 80.2 bits (198), Expect = 1e-16
 Identities = 74/294 (25%), Positives = 127/294 (43%), Gaps = 39/294 (13%)

Query: 42  IKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSV-SDALLTNEILVMRKIVENV-S 99
           ++T+  +G+    G  GS         G    +K V + + + +  +IL   +I+    S
Sbjct: 7   LETISDLGA----GNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRS 62

Query: 100 PHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVG------AAAVIRQIAE 153
           P+  ++  Y  + ++N + + +E    G L DRI     Y + G         +   + E
Sbjct: 63  PY--IVSFYGAFLNENNICMCMEFMDCGSL-DRI-----YKKGGPIPVEILGKIAVAVVE 114

Query: 154 GLAALHQAN-IVHRDLKPENCLFLNDREDSPLKIMDFGLSS--VEGYTDPVVGLFGSIDY 210
           GL  L+  + I+HRD+KP N L  N R    +K+ DFG+S   +    D  VG   +  Y
Sbjct: 115 GLTYLYNVHRIMHRDIKPSNILV-NSR--GQIKLCDFGVSGELINSIADTFVG---TSTY 168

Query: 211 VSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWK- 269
           +SPE +   + T KSD+WSLG+ +  L  G  PF   +     Q    G     +Q  + 
Sbjct: 169 MSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQE 228

Query: 270 --------NISSSAKQLISSLLTVDPNRRPSAQELL-NHPWVIGDSAKEEEMDA 314
                   +     +  + + L  DP  RP+ Q+L    P++    A   ++ A
Sbjct: 229 PPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQALRASNVDLQA 282

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 80.9 bits (199), Expect = 1e-16
 Identities = 88/320 (27%), Positives = 135/320 (42%), Gaps = 50/320 (15%)

Query: 36  ETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILV-MRKI 94
           E N+   +   R  + TP G  G+ GS  S+       R++V+V       + L+  R+ 
Sbjct: 5   ELNKTVWEVPERYQNLTPVG-SGAYGSVCSAYDT--RLRQKVAVKKLSRPFQSLIHARRT 61

Query: 95  VENVS-----PHPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVG 143
              +       H NVI L DV+      E+ N V+L+  L   G   + IV  ++  +  
Sbjct: 62  YRELRLLKHMKHENVIGLLDVFTPATSIENFNEVYLVTNLM--GADLNNIVKCQKLSDEH 119

Query: 144 AAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVG 203
              +I Q+  GL  +H A I+HRDLKP N   +   ED  L+I+DFGL+      D + G
Sbjct: 120 VQFLIYQLLRGLKYIHSAGIIHRDLKPSN---VAVNEDCELRILDFGLA--RQADDEMTG 174

Query: 204 LFGSIDYVSPEALLQ-DRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFS 262
              +  Y +PE +L         D+WS+G I+  LL G   F       + + IM    +
Sbjct: 175 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGT 234

Query: 263 FYEQTWKNISSS---------------------------AKQLISSLLTVDPNRRPSAQE 295
              +  K ISS                            A  L+  +L +D ++R SA E
Sbjct: 235 PSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASE 294

Query: 296 LLNHPWVIGDSAKEEEMDAE 315
            L HP+       E+E +AE
Sbjct: 295 ALAHPYFSQYHDPEDEPEAE 314

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score = 80.9 bits (199), Expect = 1e-16
 Identities = 62/213 (29%), Positives = 109/213 (51%), Gaps = 16/213 (7%)

Query: 104 VIDLYDVYEDQNGVHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQAN 162
           +  L+  ++D+N ++L+++   GG+L   +   ++R  E  A   + ++   + ++HQ +
Sbjct: 63  ITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLH 122

Query: 163 IVHRDLKPENCLFLNDREDSPLKIMDFG--LSSVEGYTDPVVGLFGSIDYVSPEAL--LQ 218
            VHRD+KP+N L      +  +++ DFG  L  +E  T       G+ DY+SPE L  ++
Sbjct: 123 YVHRDIKPDNILM---DMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAME 179

Query: 219 D---RITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGE--FSFYEQTWKNISS 273
           D   +   + D WSLGV +Y +L G  PF A+S  +    IM  +  F F  Q   ++S 
Sbjct: 180 DGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQV-TDVSE 238

Query: 274 SAKQLISSLLTVDPNR--RPSAQELLNHPWVIG 304
            AK LI  L+    +R  +   ++   HP+  G
Sbjct: 239 DAKDLIRRLICSREHRLGQNGIEDFKQHPFFTG 271

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 80.9 bits (200), Expect = 1e-16
 Identities = 73/266 (27%), Positives = 114/266 (42%), Gaps = 69/266 (25%)

Query: 89  LVMRKIVENVSPHPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEV 142
           LV+ K+V     H N+I L +V+      E+   V+L++EL       D  + Q   M++
Sbjct: 66  LVLMKLVN----HKNIIGLLNVFTPQKSLEEFQDVYLVMEL------MDANLCQVIQMDL 115

Query: 143 G---AAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEG--- 196
                + ++ Q+  G+  LH A I+HRDLKP N +    + D  LKI+DFGL+   G   
Sbjct: 116 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSF 172

Query: 197 -YTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVIL------YILLSGY-------- 241
             T  VV  +    Y +PE +L        D+WS+G I+       +L  G         
Sbjct: 173 MMTPYVVTRY----YRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNK 228

Query: 242 ---------PPFIAQ---------SNRQKQQMIMAGEF----SFY---EQTWKNISSSAK 276
                      F+++          NR K       E      F    E   K  +S A+
Sbjct: 229 IIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQAR 288

Query: 277 QLISSLLTVDPNRRPSAQELLNHPWV 302
            L+S +L +DP +R S  + L HP++
Sbjct: 289 DLLSKMLVIDPEKRISVDDALQHPYI 314

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 79.3 bits (195), Expect = 2e-16
 Identities = 68/251 (27%), Positives = 114/251 (45%), Gaps = 31/251 (12%)

Query: 64  SSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYED--QNGVHLIL 121
           ++ Q+ F P   + S   + L  EI +++ +      H  ++  Y    D  +  + + +
Sbjct: 31  AAKQVQFDPESPETSKEVSALECEIQLLKNL-----QHERIVQYYGCLRDRAEKTLTIFM 85

Query: 122 ELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRED 181
           E   GG + D++ A     E       RQI EG++ LH   IVHRD+K  N L      D
Sbjct: 86  EYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANIL-----RD 140

Query: 182 SP--LKIMDFG----LSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY 235
           S   +K+ DFG    L ++      +  + G+  ++SPE +  +    K+D+WSLG  + 
Sbjct: 141 SAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVV 200

Query: 236 ILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWK-----NISSSAKQLISSLLTVDPNRR 290
            +L+  PP+        +   MA  F    Q        +IS  A+  +  +  V+   R
Sbjct: 201 EMLTEKPPW-------AEYEAMAAIFKIATQPTNPQLPSHISEHARDFLGCIF-VEARHR 252

Query: 291 PSAQELLNHPW 301
           PSA+ELL HP+
Sbjct: 253 PSAEELLRHPF 263

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 80.1 bits (198), Expect = 2e-16
 Identities = 66/239 (27%), Positives = 104/239 (43%), Gaps = 46/239 (19%)

Query: 101 HPNVIDLYDVY-----EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGL 155
           H NVI + D+      E  N V+++ EL    +L   I + +   +      + Q+  GL
Sbjct: 63  HENVIAIKDIMPPPHREAFNDVYIVYELMDT-DLHQIIRSSQTLSDDHCQYFLYQLLRGL 121

Query: 156 AALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEG-----YTDPVVGLFGSIDY 210
             +H AN++HRDLKP N L LN   D  LKI DFGL+          T+ VV  +    Y
Sbjct: 122 KYIHSANVLHRDLKPSN-LLLNANCD--LKICDFGLARTTSEKGDFMTEYVVTRW----Y 174

Query: 211 VSPEALLQ-DRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMA-------GEFS 262
            +PE LL     T+  D+WS+G I   LL   P F  +    + ++I          +  
Sbjct: 175 RAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLG 234

Query: 263 F--------------------YEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPW 301
           F                    + + + + +  A  L+  +L  DP++R + +E L HP+
Sbjct: 235 FIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPY 293

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 79.4 bits (196), Expect = 2e-16
 Identities = 66/258 (25%), Positives = 106/258 (41%), Gaps = 50/258 (19%)

Query: 18  LGRGGFSVVRRGIKKTCGETN---QVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTR 74
           LG G F  V  G+ +         QVA+KTL                 S   +  F    
Sbjct: 14  LGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPES-------------CSEQDESDFL--- 57

Query: 75  KQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIV 134
                       E L+M K       H N++ L  V  ++    ++LEL +GG+L    +
Sbjct: 58  -----------MEALIMSKFN-----HQNIVRLIGVSFERLPRFILLELMAGGDL-KSFL 100

Query: 135 AQERYMEVGAAA--------VIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKI 186
            + R      ++          R +A+G   L + + +HRD+   NCL          KI
Sbjct: 101 RENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKI 160

Query: 187 MDFGLSSVEGYTDPVVGLFGS----IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GY 241
            DFG++  + Y        G     I ++ PEA L    TSK+D+WS GV+L+ + S GY
Sbjct: 161 ADFGMAR-DIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGY 219

Query: 242 PPFIAQSNRQKQQMIMAG 259
            P+  ++N++  + +  G
Sbjct: 220 MPYPGRTNQEVMEFVTGG 237

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 79.0 bits (195), Expect = 2e-16
 Identities = 64/264 (24%), Positives = 105/264 (39%), Gaps = 65/264 (24%)

Query: 11  EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGF 70
           E+ +   LG G F  V  G+ K      +VAIK L+                        
Sbjct: 7   EFTLERKLGSGYFGEVWEGLWKN---RVRVAIKILKS----------------------- 40

Query: 71  FPTRKQVSVSDAL----LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSG 126
                     D L       E+  ++++      H ++I L+ V      V++I EL   
Sbjct: 41  ---------DDLLKQQDFQKEVQALKRL-----RHKHLISLFAVCSVGEPVYIITELMEK 86

Query: 127 GELF-------DRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDR 179
           G L         +++     +++       Q+AEG+A L + N +HRDL   N L     
Sbjct: 87  GSLLAFLRSPEGQVLPVASLIDMAC-----QVAEGMAYLEEQNSIHRDLAARNILV---G 138

Query: 180 EDSPLKIMDFGLSSVEGYTDPVVGLFGS---IDYVSPEALLQDRITSKSDMWSLGVILYI 236
           ED   K+ DFGL+ +    + V           + +PEA      ++KSD+WS G++LY 
Sbjct: 139 EDLVCKVADFGLARL--IKEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYE 196

Query: 237 LLS-GYPPFIAQSNRQKQQMIMAG 259
           + + G  P+   +N +    I AG
Sbjct: 197 MFTYGQVPYPGMNNHEVYDQITAG 220

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 78.8 bits (194), Expect = 2e-16
 Identities = 75/285 (26%), Positives = 123/285 (43%), Gaps = 49/285 (17%)

Query: 18  LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQV 77
           LG G F VV+ G  K  G+ + VAIK +                             K+ 
Sbjct: 12  LGTGQFGVVKYG--KWRGQYD-VAIKMI-----------------------------KEG 39

Query: 78  SVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA-Q 136
           S+S+     E  VM K+      H  ++ LY V   Q  ++++ E  S G L + +    
Sbjct: 40  SMSEDEFIEEAKVMMKL-----SHEKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHG 94

Query: 137 ERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV-- 194
           +R+       + + + EG+A L     +HRDL   NCL ++D     +K+ DFGLS    
Sbjct: 95  KRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCL-VDD--QGCVKVSDFGLSRYVL 151

Query: 195 -EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQK 252
            + YT  V   F  + +  PE LL  + +SKSD+W+ GV+++ + S G  P+   +N + 
Sbjct: 152 DDEYTSSVGSKF-PVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSET 210

Query: 253 QQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELL 297
            + +  G   +        S     ++ S        RP+ Q+LL
Sbjct: 211 VEKVSQGLRLYRPHL---ASEKVYAIMYSCWHEKAEERPTFQQLL 252

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 79.3 bits (195), Expect = 2e-16
 Identities = 62/234 (26%), Positives = 108/234 (46%), Gaps = 41/234 (17%)

Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIR-QIAEGLAALH 159
           H N++ L+D+   +  + L+ E     +L   +      M +    +   Q+  GL+  H
Sbjct: 62  HANIVTLHDIIHTERCLTLVFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCH 120

Query: 160 QANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEG-----YTDPVVGLFGSIDYVSPE 214
           +  I+HRDLKP+N L +N++ +  LK+ DFGL+  +      Y++ VV L+    Y  P+
Sbjct: 121 KRKILHRDLKPQN-LLINEKGE--LKLADFGLARAKSVPTKTYSNEVVTLW----YRPPD 173

Query: 215 ALL-QDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
            LL     ++  DMW +G ILY + +G P F   + +++  +I     +  E+TW  I+S
Sbjct: 174 VLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITS 233

Query: 274 SAK--------------------------QLISSLLTVDPNRRPSAQELLNHPW 301
           + +                           L+SSLL  +   R SA+  L H +
Sbjct: 234 NEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSY 287

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 79.7 bits (196), Expect = 2e-16
 Identities = 58/206 (28%), Positives = 92/206 (44%), Gaps = 13/206 (6%)

Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HPN I+    Y  ++   L++E C G       V ++   EV  AA+     +GLA LH 
Sbjct: 80  HPNTIEYKGCYLKEHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHS 139

Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALL--- 217
            N++HRD+K  N L     E   +K+ DFG +S    + P     G+  +++PE +L   
Sbjct: 140 HNMIHRDIKAGNILL---TEPGQVKLADFGSASK---SSPANSFVGTPYWMAPEVILAMD 193

Query: 218 QDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEF-SFYEQTWKNISSSAK 276
           + +   K D+WSLG+    L    PP    +       I   +  +     W   + S +
Sbjct: 194 EGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLQSNEW---TDSFR 250

Query: 277 QLISSLLTVDPNRRPSAQELLNHPWV 302
             +   L   P  RP++ ELL H +V
Sbjct: 251 GFVDYCLQKIPQERPASAELLRHDFV 276

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 79.3 bits (195), Expect = 2e-16
 Identities = 62/241 (25%), Positives = 111/241 (46%), Gaps = 55/241 (22%)

Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAV--------IRQIA 152
           H N++ L+D+   +  + L+ E        D+ + Q  Y++    ++        + Q+ 
Sbjct: 63  HANIVTLHDIIHTEKSLTLVFEY------LDKDLKQ--YLDDCGNSINMHNVKLFLFQLL 114

Query: 153 EGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEG-----YTDPVVGLFGS 207
            GL   H+  ++HRDLKP+N L +N+R +  LK+ DFGL+  +      Y++ VV L+  
Sbjct: 115 RGLNYCHRRKVLHRDLKPQN-LLINERGE--LKLADFGLARAKSIPTKTYSNEVVTLW-- 169

Query: 208 IDYVSPEALL-QDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQ 266
             Y  P+ LL     +++ DMW +G I Y + +G P F   +  ++   I     +  E+
Sbjct: 170 --YRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEE 227

Query: 267 TWKNISSSAK--------------------------QLISSLLTVDPNRRPSAQELLNHP 300
           TW  I S+ +                          +L+S LL  +  +R SA+E + HP
Sbjct: 228 TWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHP 287

Query: 301 W 301
           +
Sbjct: 288 Y 288

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 79.7 bits (197), Expect = 3e-16
 Identities = 59/207 (28%), Positives = 100/207 (48%), Gaps = 14/207 (6%)

Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HP +++L+  ++ ++ V  ++E  +GG+L   I   + + E  A      +  GL  LH+
Sbjct: 61  HPFLVNLFACFQTEDHVCFVMEYAAGGDLMMHI-HTDVFSEPRAVFYAACVVLGLQYLHE 119

Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVE-GYTDPVVGLFGSIDYVSPEALLQD 219
             IV+RDLK +N L   D E   +KI DFGL     G+ D      G+ ++++PE L + 
Sbjct: 120 NKIVYRDLKLDNLLL--DTEGF-VKIADFGLCKEGMGFGDRTSTFCGTPEFLAPEVLTET 176

Query: 220 RITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLI 279
             T   D W LGV++Y +L G  PF      +    I+  E  +     + +S  A  ++
Sbjct: 177 SYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRYP----RFLSREAISIM 232

Query: 280 SSLLTVDPNRR-----PSAQELLNHPW 301
             LL  +P RR       A+++   P+
Sbjct: 233 RRLLRRNPERRLGSGEKDAEDVKKQPF 259

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 79.1 bits (195), Expect = 3e-16
 Identities = 54/219 (24%), Positives = 108/219 (49%), Gaps = 17/219 (7%)

Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           ++I+   + HP +  L+  ++ ++ +  ++E  +GG+L  +I    ++ E  +     ++
Sbjct: 46  KRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNGGDLMFQIQRSRKFDEPRSRFYAAEV 105

Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVG--LFGSID 209
              L  LH+  +++RDLK +N L      +   K+ DFG+   EG  + V      G+ D
Sbjct: 106 TLALMFLHRHGVIYRDLKLDNILL---DAEGHCKLADFGMCK-EGILNGVTTTTFCGTPD 161

Query: 210 YVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWK 269
           Y++PE L +       D W+LGV++Y +++G PPF A +     + I+  +  +    W 
Sbjct: 162 YIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLY--PVW- 218

Query: 270 NISSSAKQLISSLLTVDPNRR----PSA---QELLNHPW 301
            +S  A  ++ + +T +PN+R     S      +  HP+
Sbjct: 219 -LSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPF 256

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 78.2 bits (193), Expect = 4e-16
 Identities = 47/166 (28%), Positives = 72/166 (43%), Gaps = 21/166 (12%)

Query: 84  LTNEILVMRKIVENVSPHPNVIDLYDVYEDQ--NGVHLILELCSGGELFDRIVAQERYME 141
              EI ++R +      H N++    V E      + LI+E    G L  R   Q    +
Sbjct: 53  FEREIEILRTL-----DHENIVKYKGVCEKPGGRSLRLIMEYLPSGSL--RDYLQRHRDQ 105

Query: 142 VGAAAVIR---QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV---- 194
           +    ++    QI +G+  L     +HRDL   N L  ++     +KI DFGL+ V    
Sbjct: 106 INLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDL---VKISDFGLAKVLPED 162

Query: 195 -EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS 239
            + Y     G    I + +PE L   + +S SD+WS GV LY L +
Sbjct: 163 KDYYYVKEPGES-PIFWYAPECLRTSKFSSASDVWSFGVTLYELFT 207

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 78.3 bits (193), Expect = 5e-16
 Identities = 73/274 (26%), Positives = 127/274 (46%), Gaps = 34/274 (12%)

Query: 75  KQVSVSDALLTNEI---LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE--- 128
           K+++  + +L N+I    V R I+   + +P V+ ++  +E +  + +++E   GG+   
Sbjct: 32  KKINKQNLILRNQIQQVFVERDIL-TFAENPFVVSMFCSFETKRHLCMVMEYVEGGDCAT 90

Query: 129 LFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMD 188
           L   I A    M   A     +    L  LH   IVHRDLKP+N L  +      +K+ D
Sbjct: 91  LLKNIGALPVDM---ARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGH---IKLTD 144

Query: 189 FGLSSV----------EGYTDPVVGLF------GSIDYVSPEALLQDRITSKSDMWSLGV 232
           FGLS +          EG+ +     F      G+ +Y++PE +L+       D W++G+
Sbjct: 145 FGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGI 204

Query: 233 ILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR-- 290
           ILY  L G  PF   +  +    +++ +  + E   + + + A+ LIS LL  +P  R  
Sbjct: 205 ILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEGD-EALPADAQDLISRLLRQNPLERLG 263

Query: 291 -PSAQELLNHPWVIG-DSAKEEEMDAEIVSRLQS 322
              A E+  H + +G D        AE + +L+S
Sbjct: 264 TGGAFEVKQHRFFLGLDWNGLLRQKAEFIPQLES 297

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|227455 COG5126, FRQ1, Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]

 Score = 75.0 bits (185), Expect = 6e-16
 Identities = 37/167 (22%), Positives = 79/167 (47%), Gaps = 9/167 (5%)

Query: 346 RTKKLKNLLGSHDLNEEEIQNLRIHFRTICANGDNA-TLSEFEEVLKAMNMSSLVPLAPR 404
              K+ +LL    L EE+IQ L+  F+    + D     +E  ++L+++  +       +
Sbjct: 1   MRSKISDLLTFTQLTEEQIQELKEAFQLFDRDSDGLIDRNELGKILRSLGFNPSEAEINK 60

Query: 405 IFDLFDNNRDGTVDMREILCGFSSLRKSQG-DDALRLCFQMYDIDRSGCITKEEVASMLR 463
           +F+  D     TVD  E L   S   K    ++ LR  F+++D D  G I+  E+  +L+
Sbjct: 61  LFEEIDAGN-ETVDFPEFLTVMSVKLKRGDKEEELREAFKLFDKDHDGYISIGELRRVLK 119

Query: 464 ALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDSSL 510
           +L +           +++++    D + DG++ ++EF+  ++   ++
Sbjct: 120 SLGER------LSDEEVEKLLKEYDEDGDGEIDYEEFKKLIKDSPTI 160

Length = 160

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 77.9 bits (192), Expect = 8e-16
 Identities = 61/218 (27%), Positives = 95/218 (43%), Gaps = 37/218 (16%)

Query: 101 HPNVIDLYDVYEDQNGVHLILELC--SGGELFDRIVAQERYMEVGAAAVIRQIAEGLAAL 158
           HPN I+    Y  ++   L++E C  S  ++ +  V ++   EV  AA+     +GLA L
Sbjct: 74  HPNTIEYKGCYLREHTAWLVMEYCLGSASDILE--VHKKPLQEVEIAAICHGALQGLAYL 131

Query: 159 HQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALL- 217
           H    +HRD+K  N L     E   +K+ DFG +S+     P     G+  +++PE +L 
Sbjct: 132 HSHERIHRDIKAGNILL---TEPGTVKLADFGSASL---VSPANSFVGTPYWMAPEVILA 185

Query: 218 --QDRITSKSDMWSLGVILYILLSGYPPF-----------IAQSNRQKQQMIMAGEFSFY 264
             + +   K D+WSLG+    L    PP            IAQ++               
Sbjct: 186 MDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLSSN-------- 237

Query: 265 EQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
              W   S   +  + S L   P  RPS++ELL H +V
Sbjct: 238 --DW---SDYFRNFVDSCLQKIPQDRPSSEELLKHRFV 270

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 77.8 bits (191), Expect = 9e-16
 Identities = 60/205 (29%), Positives = 92/205 (44%), Gaps = 17/205 (8%)

Query: 101 HPNVIDLYDVYEDQNGVHLILELC--SGGELFDRIVAQERYMEVGAAAVIRQIAEGLAAL 158
           HPN I     Y  ++   L++E C  S  +L +  V ++   EV  AAV     +GLA L
Sbjct: 74  HPNTIQYRGCYLREHTAWLVMEYCLGSASDLLE--VHKKPLQEVEIAAVTHGALQGLAYL 131

Query: 159 HQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALL- 217
           H  N++HRD+K  N L     E   +K+ DFG +S+     P     G+  +++PE +L 
Sbjct: 132 HSHNMIHRDVKAGNILL---SEPGLVKLGDFGSASI---MAPANXFVGTPYWMAPEVILA 185

Query: 218 --QDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQT-WKNISSS 274
             + +   K D+WSLG+    L    PP    +       I   E    +   W   S  
Sbjct: 186 MDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHW---SEY 242

Query: 275 AKQLISSLLTVDPNRRPSAQELLNH 299
            +  + S L   P  RP+++ LL H
Sbjct: 243 FRNFVDSCLQKIPQDRPTSEVLLKH 267

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 77.4 bits (190), Expect = 9e-16
 Identities = 60/222 (27%), Positives = 101/222 (45%), Gaps = 15/222 (6%)

Query: 102 PNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA---QERYMEVGAAAVIRQIAEGLAAL 158
           P +   Y  Y     + +I+E   GG   D +     +E Y+    A ++R+I +GL  L
Sbjct: 62  PYITRYYGSYLKGTKLWIIMEYLGGGSALDLLKPGPLEETYI----ATILREILKGLDYL 117

Query: 159 HQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF-GSIDYVSPEALL 217
           H    +HRD+K  N L     E   +K+ DFG++     T      F G+  +++PE + 
Sbjct: 118 HSERKIHRDIKAANVLL---SEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIK 174

Query: 218 QDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQ 277
           Q     K+D+WSLG+    L  G PP    S+    +++     +         S   K+
Sbjct: 175 QSAYDFKADIWSLGITAIELAKGEPPN---SDLHPMRVLFLIPKNSPPTLEGQYSKPFKE 231

Query: 278 LISSLLTVDPNRRPSAQELLNHPWVIGDSAKEEEMDAEIVSR 319
            + + L  DP  RP+A+ELL H ++   + K   +  E++ R
Sbjct: 232 FVEACLNKDPRFRPTAKELLKHKFITRYTKKTSFL-TELIDR 272

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 77.0 bits (189), Expect = 9e-16
 Identities = 79/288 (27%), Positives = 126/288 (43%), Gaps = 57/288 (19%)

Query: 18  LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQV 77
           LG G F  V  G   T     +VA+KTL+  G+ +P  F                     
Sbjct: 14  LGNGQFGEVWMG---TWNGNTKVAVKTLKP-GTMSPESF--------------------- 48

Query: 78  SVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE 137
                    E  +M+K+      H  ++ LY V  ++  ++++ E  S G L D +   E
Sbjct: 49  -------LEEAQIMKKL-----RHDKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKDGE 95

Query: 138 -RYME----VGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS 192
            R ++    V  AA   Q+A G+A + + N +HRDL+  N L  +       KI DFGL+
Sbjct: 96  GRALKLPNLVDMAA---QVAAGMAYIERMNYIHRDLRSANILVGDGL---VCKIADFGLA 149

Query: 193 SV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQS 248
            +     YT      F  I + +PEA L  R T KSD+WS G++L  L++ G  P+   +
Sbjct: 150 RLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMN 208

Query: 249 NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
           NR+  + +  G   +     ++   S  +L+      DP  RP+ + L
Sbjct: 209 NREVLEQVERG---YRMPCPQDCPISLHELMLQCWKKDPEERPTFEYL 253

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 77.4 bits (190), Expect = 1e-15
 Identities = 71/272 (26%), Positives = 118/272 (43%), Gaps = 33/272 (12%)

Query: 73  TRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDR 132
           T+ +  + D ++  EIL           HP ++ L   +     + +++E C GG +   
Sbjct: 47  TKSEEELEDYMVEIEILA-------TCNHPYIVKLLGAFYWDGKLWIMIEFCPGGAVDAI 99

Query: 133 IVAQERYMEVGAAAVI-RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGL 191
           ++  +R +      VI RQ+ E L  LH   I+HRDLK  N L   D +   +K+ DFG+
Sbjct: 100 MLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGD---IKLADFGV 156

Query: 192 SSVEGYTDPVVGLF-GSIDYVSPEALLQDRITS-----KSDMWSLGVILYILLSGYPPFI 245
           S+    T      F G+  +++PE ++ + +       K+D+WSLG+ L  +    PP  
Sbjct: 157 SAKNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPH- 215

Query: 246 AQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGD 305
            + N  +  + +A             S   +  + + L   P  RPSA +LL HP+    
Sbjct: 216 HELNPMRVLLKIAKSEPPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPF---- 271

Query: 306 SAKEEEMDAEIVSRLQSFNARRKLRAAAIASV 337
                      VS + S    R+L A A A V
Sbjct: 272 -----------VSSVTSNRPLRELVAEAKAEV 292

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 77.4 bits (190), Expect = 2e-15
 Identities = 61/213 (28%), Positives = 107/213 (50%), Gaps = 16/213 (7%)

Query: 104 VIDLYDVYEDQNGVHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQAN 162
           +  L+  ++D+N ++L+++   GG+L   +   ++R  E  A   I ++   + ++HQ +
Sbjct: 63  ITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLH 122

Query: 163 IVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVG---LFGSIDYVSPEAL--L 217
            VHRD+KP+N L      +  +++ DFG S ++   D  V      G+ DY+SPE L  +
Sbjct: 123 YVHRDIKPDNVLL---DMNGHIRLADFG-SCLKMNQDGTVQSSVAVGTPDYISPEILQAM 178

Query: 218 QD---RITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSF-YEQTWKNISS 273
           +D   +   + D WSLGV +Y +L G  PF A+S  +    IM  E  F +     ++S 
Sbjct: 179 EDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHITDVSE 238

Query: 274 SAKQLISSLLTVDPNR--RPSAQELLNHPWVIG 304
            AK LI  L+     R  +   ++   H +  G
Sbjct: 239 EAKDLIQRLICSRERRLGQNGIEDFKKHAFFEG 271

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 76.5 bits (188), Expect = 2e-15
 Identities = 56/181 (30%), Positives = 77/181 (42%), Gaps = 32/181 (17%)

Query: 147 VIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYT---DPVVG 203
           ++RQ   GL  LH   IVHRDLKPEN L  +  +   +K+ DFGL+ +        PVV 
Sbjct: 113 LMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQ---VKLADFGLARIYSCQMALTPVVV 169

Query: 204 LFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSF 263
              ++ Y +PE LLQ    +  DMWS+G I   +    P F   S   +   I       
Sbjct: 170 ---TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLP 226

Query: 264 YEQTW-----------------------KNISSSAKQLISSLLTVDPNRRPSAQELLNHP 300
            E  W                         I  S  QL+  +LT +P++R SA   L HP
Sbjct: 227 PEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHP 286

Query: 301 W 301
           +
Sbjct: 287 F 287

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 77.0 bits (189), Expect = 2e-15
 Identities = 63/241 (26%), Positives = 109/241 (45%), Gaps = 55/241 (22%)

Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAV--------IRQIA 152
           H N++ L+D+      + L+ E        D+ + Q  YM+     +        + QI 
Sbjct: 63  HANIVTLHDIVHTDKSLTLVFEY------LDKDLKQ--YMDDCGNIMSMHNVKIFLYQIL 114

Query: 153 EGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEG-----YTDPVVGLFGS 207
            GLA  H+  ++HRDLKP+N L +N+R +  LK+ DFGL+  +      Y++ VV L+  
Sbjct: 115 RGLAYCHRRKVLHRDLKPQN-LLINERGE--LKLADFGLARAKSVPTKTYSNEVVTLW-- 169

Query: 208 IDYVSPEALL-QDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQ 266
             Y  P+ LL     +++ DMW +G I + + SG P F   +   +  +I     +  E+
Sbjct: 170 --YRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEE 227

Query: 267 TWKNISSSAK--------------------------QLISSLLTVDPNRRPSAQELLNHP 300
           TW  ISS+ +                          +L++  L  +  +R SA+E + H 
Sbjct: 228 TWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHA 287

Query: 301 W 301
           +
Sbjct: 288 Y 288

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 76.3 bits (188), Expect = 2e-15
 Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 25/214 (11%)

Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAA---------AVIRQI 151
           H NV+ L  +  +    ++ILE    G+L   + A +   E             A+  QI
Sbjct: 67  HKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQI 126

Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD---PVVGLFGSI 208
           A G+  L  A  VHRDL   NCL  + RE   +K+    LS  + Y      +      +
Sbjct: 127 ALGMDHLSNARFVHRDLAARNCLVSSQRE---VKVSLLSLSK-DVYNSEYYKLRNALIPL 182

Query: 209 DYVSPEALLQDRITSKSDMWSLGVILY-ILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQT 267
            +++PEA+ +D  ++KSD+WS GV+++ +   G  PF   S+ +    + AG+       
Sbjct: 183 RWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLE----- 237

Query: 268 WK---NISSSAKQLISSLLTVDPNRRPSAQELLN 298
                   S   +L++    V+P  RPS  EL++
Sbjct: 238 LPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVS 271

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 75.9 bits (186), Expect = 2e-15
 Identities = 66/271 (24%), Positives = 121/271 (44%), Gaps = 19/271 (7%)

Query: 39  QVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSD-ALLTNEILVMRKIVEN 97
           Q   + ++RIGS T YG      + ++ ++      K     D A++  EI++M+     
Sbjct: 8   QEDFELIQRIGSGT-YGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKD---- 62

Query: 98  VSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAA 157
              H N++  +  Y  ++ + + +E C GG L D         E   A V R+  +GL  
Sbjct: 63  -CKHSNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYY 121

Query: 158 LHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDYVSPEAL 216
           LH    +HRD+K  N L     ++  +K+ DFG+S+ +           G+  +++PE  
Sbjct: 122 LHSKGKMHRDIKGANILL---TDNGHVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVA 178

Query: 217 LQDR---ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKN--- 270
             +R        D+W++G+    L    PP         + + +  + +F     K+   
Sbjct: 179 AVERKGGYNQLCDIWAVGITAIELAELQPPMF--DLHPMRALFLMTKSNFQPPKLKDKMK 236

Query: 271 ISSSAKQLISSLLTVDPNRRPSAQELLNHPW 301
            S+S    +   LT +P +RP+A++LL HP+
Sbjct: 237 WSNSFHHFVKMALTKNPKKRPTAEKLLQHPF 267

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 77.0 bits (189), Expect = 2e-15
 Identities = 55/210 (26%), Positives = 104/210 (49%), Gaps = 19/210 (9%)

Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           + + E  S HP ++ L+  ++ ++ +  ++E  +GG+L   +  Q +  E  A     +I
Sbjct: 46  KHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEI 105

Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYT--DPVVGLFGSID 209
           +  L  LH+  I++RDLK +N L   D E   +K+ D+G+   EG    D      G+ +
Sbjct: 106 SLALNYLHERGIIYRDLKLDNVLL--DSEGH-IKLTDYGMCK-EGLRPGDTTSTFCGTPN 161

Query: 210 YVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF--IAQSNRQKQ-------QMIMAGE 260
           Y++PE L  +      D W+LGV+++ +++G  PF  +  S+   Q       Q+I+  +
Sbjct: 162 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ 221

Query: 261 FSFYEQTWKNISSSAKQLISSLLTVDPNRR 290
                +  +++S  A  ++ S L  DP  R
Sbjct: 222 I----RIPRSLSVKAASVLKSFLNKDPKER 247

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 75.9 bits (186), Expect = 2e-15
 Identities = 72/240 (30%), Positives = 109/240 (45%), Gaps = 48/240 (20%)

Query: 18  LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQV 77
           LG+G F  V  G   T   T +VAIKTL+  G+ +P  F                     
Sbjct: 14  LGQGCFGEVWMG---TWNGTTRVAIKTLKP-GTMSPEAF--------------------- 48

Query: 78  SVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ- 136
                    E  VM+K+      H  ++ LY V  ++  ++++ E  S G L D +  + 
Sbjct: 49  -------LQEAQVMKKL-----RHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEM 95

Query: 137 ERYMEVGAAA-VIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV- 194
            +Y+ +     +  QIA G+A + + N VHRDL+  N L     E+   K+ DFGL+ + 
Sbjct: 96  GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADFGLARLI 152

Query: 195 --EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQ 251
               YT      F  I + +PEA L  R T KSD+WS G++L  L + G  P+    NR+
Sbjct: 153 EDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 211

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 75.5 bits (185), Expect = 3e-15
 Identities = 76/281 (27%), Positives = 125/281 (44%), Gaps = 51/281 (18%)

Query: 18  LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQV 77
           LG+G F  V  G   T   T +VAIKTL+  G+  P  F                     
Sbjct: 14  LGQGCFGEVWMG---TWNGTTKVAIKTLKP-GTMMPEAF--------------------- 48

Query: 78  SVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE 137
                    E  +M+K+      H  ++ LY V  ++  ++++ E    G L D +   +
Sbjct: 49  -------LQEAQIMKKL-----RHDKLVPLYAVVSEEP-IYIVTEFMGKGSLLDFLKEGD 95

Query: 138 -RYMEVGAAA-VIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV- 194
            +Y+++     +  QIA+G+A + + N +HRDL+  N L     ++   KI DFGL+ + 
Sbjct: 96  GKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILV---GDNLVCKIADFGLARLI 152

Query: 195 --EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQ 251
               YT      F  I + +PEA L  R T KSD+WS G++L  L++ G  P+    NR+
Sbjct: 153 EDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNRE 211

Query: 252 KQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPS 292
             + +  G   +     +    S  +L+      DP+ RP+
Sbjct: 212 VLEQVERG---YRMPCPQGCPESLHELMKLCWKKDPDERPT 249

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 77.0 bits (189), Expect = 3e-15
 Identities = 87/334 (26%), Positives = 143/334 (42%), Gaps = 50/334 (14%)

Query: 3   QETRKL---TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGS 59
           ++ RKL    ++Y+V  ++GRG F  V+    K+  +    A+K L +        F   
Sbjct: 33  RKIRKLQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKV--YAMKLLSK--------FEMI 82

Query: 60  RGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHL 119
           + S S+    F+  R  ++ +++                   P V+ L+  ++D   +++
Sbjct: 83  KRSDSAF---FWEERDIMAFANS-------------------PWVVQLFCAFQDDKYLYM 120

Query: 120 ILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDR 179
           ++E   GG+L + +++     E  A     ++   L A+H   ++HRD+KP+N L     
Sbjct: 121 VMEYMPGGDLVN-LMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLL---D 176

Query: 180 EDSPLKIMDFGLSSVEGYTDPVV--GLFGSIDYVSPEALLQD----RITSKSDMWSLGVI 233
           +   LK+ DFG       T  V      G+ DY+SPE L           + D WS+GV 
Sbjct: 177 KHGHLKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVF 236

Query: 234 LYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNR--RP 291
           L+ +L G  PF A S       IM  + S        IS  AK LI + LT    R  R 
Sbjct: 237 LFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRN 296

Query: 292 SAQELLNHPWVIGDSAKEE---EMDAEIVSRLQS 322
             +E+  HP+   D    +   E  A +V  L S
Sbjct: 297 GVEEIKQHPFFKNDQWNWDNIRETAAPVVPELSS 330

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 75.4 bits (185), Expect = 3e-15
 Identities = 52/155 (33%), Positives = 77/155 (49%), Gaps = 10/155 (6%)

Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE--RYMEVGAAAVIRQIAEGLAAL 158
           H  ++ LY V   +  +++I E  + G L D + + E  + +         QIAEG+A +
Sbjct: 60  HDKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYI 119

Query: 159 HQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEA 215
            + N +HRDL+  N L     E    KI DFGL+ V     YT      F  I + +PEA
Sbjct: 120 ERKNYIHRDLRAANVLV---SESLMCKIADFGLARVIEDNEYTAREGAKF-PIKWTAPEA 175

Query: 216 LLQDRITSKSDMWSLGVILY-ILLSGYPPFIAQSN 249
           +     T KSD+WS G++LY I+  G  P+   SN
Sbjct: 176 INFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSN 210

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 77.0 bits (189), Expect = 3e-15
 Identities = 70/257 (27%), Positives = 117/257 (45%), Gaps = 52/257 (20%)

Query: 89  LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVG---AA 145
           LV+ K V     H N+I L +V+  Q  +    ++    EL D  + Q   ME+     +
Sbjct: 74  LVLMKCVN----HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS 129

Query: 146 AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF 205
            ++ Q+  G+  LH A I+HRDLKP N +    + D  LKI+DFGL+   G +  +    
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYV 186

Query: 206 GSIDYVSPEALLQDRITSKSDMWSLGVILYILLSG---YP--PFIAQSNRQKQQM----- 255
            +  Y +PE +L        D+WS+G I+  ++ G   +P    I Q N+  +Q+     
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCP 246

Query: 256 ------------------IMAGEFSFYEQTWKNI------------SSSAKQLISSLLTV 285
                               AG +SF E+ + ++            +S A+ L+S +L +
Sbjct: 247 EFMKKLQPTVRTYVENRPKYAG-YSF-EKLFPDVLFPADSEHNKLKASQARDLLSKMLVI 304

Query: 286 DPNRRPSAQELLNHPWV 302
           D ++R S  E L HP++
Sbjct: 305 DASKRISVDEALQHPYI 321

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 77.0 bits (189), Expect = 3e-15
 Identities = 83/332 (25%), Positives = 140/332 (42%), Gaps = 49/332 (14%)

Query: 3   QETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGS 62
           ++ R   ++YEV  ++GRG F           GE   V  K+ R++ +            
Sbjct: 36  RDLRMKAEDYEVVKVIGRGAF-----------GEVQLVRHKSTRKVYA------------ 72

Query: 63  SSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILE 122
                +      + +  SD+    E     + +   +  P V+ L+  ++D   +++++E
Sbjct: 73  -----MKLLSKFEMIKRSDSAFFWE----ERDIMAFANSPWVVQLFYAFQDDRYLYMVME 123

Query: 123 LCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDS 182
              GG+L + +++     E  A     ++   L A+H    +HRD+KP+N L     +  
Sbjct: 124 YMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL---DKSG 179

Query: 183 PLKIMDFGLSSVEGYTDPVV---GLFGSIDYVSPEALLQD----RITSKSDMWSLGVILY 235
            LK+ DFG + ++   + +V      G+ DY+SPE L           + D WS+GV LY
Sbjct: 180 HLKLADFG-TCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLY 238

Query: 236 ILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNR--RPSA 293
            +L G  PF A S       IM  + S       +IS  AK LI + LT    R  R   
Sbjct: 239 EMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGV 298

Query: 294 QELLNHPWVIGDSAKEEEMD---AEIVSRLQS 322
           +E+  H +   D    E +    A +V  L S
Sbjct: 299 EEIKRHLFFKNDQWAWETLRDTVAPVVPDLSS 330

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 75.5 bits (186), Expect = 4e-15
 Identities = 78/326 (23%), Positives = 131/326 (40%), Gaps = 75/326 (23%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQ-VAIKTLRRIGSTTPYGFPGSRGSSSSSQI 68
           ++YE   ++G G + +V +   K   ET Q VAIK            F  S       +I
Sbjct: 1   EKYENLGLVGEGSYGMVMKCKHK---ETGQIVAIKK-----------FLESEDDKMVKKI 46

Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
                             EI +++++      H N+++L +V+  +  ++L+ E      
Sbjct: 47  AM---------------REIRMLKQL-----RHENLVNLIEVFRRKKRLYLVFEFVDHTV 86

Query: 129 LFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMD 188
           L D         E      + QI  G+   H  NI+HRD+KPEN L     +   +K+ D
Sbjct: 87  LDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILV---SQSGVVKLCD 143

Query: 189 FGL-----SSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYP 242
           FG      +  E YTD V   +    Y +PE L+ D    ++ D+W++G ++  +L+G P
Sbjct: 144 FGFARTLAAPGEVYTDYVATRW----YRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEP 199

Query: 243 PFIAQSN--------------RQKQQMIM-------------AGEFSFYEQTWKNISSSA 275
            F   S+                + Q I                E    E+ +  +S   
Sbjct: 200 LFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLV 259

Query: 276 KQLISSLLTVDPNRRPSAQELLNHPW 301
             L    L +DP+ RPS+ +LL+H +
Sbjct: 260 LDLAKQCLRIDPDDRPSSSQLLHHEF 285

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 76.3 bits (187), Expect = 5e-15
 Identities = 70/255 (27%), Positives = 110/255 (43%), Gaps = 48/255 (18%)

Query: 89  LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVG---AA 145
           LV+ K V     H N+I L +V+  Q  +    ++    EL D  + Q   ME+     +
Sbjct: 67  LVLMKCVN----HKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQMELDHERMS 122

Query: 146 AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF 205
            ++ Q+  G+  LH A I+HRDLKP N +    + D  LKI+DFGL+   G +  +    
Sbjct: 123 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYV 179

Query: 206 GSIDYVSPEALLQDRITSKSDMWSLGVIL------YILLSGY-----------------P 242
            +  Y +PE +L        D+WS+G I+       IL  G                  P
Sbjct: 180 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP 239

Query: 243 PFIAQ---------SNRQK------QQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDP 287
            F+ +          NR K       ++     F    +  K  +S A+ L+S +L +DP
Sbjct: 240 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDP 299

Query: 288 NRRPSAQELLNHPWV 302
            +R S  E L HP++
Sbjct: 300 AKRISVDEALQHPYI 314

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 74.5 bits (183), Expect = 8e-15
 Identities = 63/227 (27%), Positives = 111/227 (48%), Gaps = 24/227 (10%)

Query: 89  LVMRKIVENVSPHPN-VIDLYDVYEDQNGVHLILELCSGGELFDRI--VAQER--YMEVG 143
           +V ++I+  V  H   ++ L   ++ +  + L++ + +GG+L   I  V +E   + E  
Sbjct: 41  MVEKRILAKV--HSRFIVSLAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPR 98

Query: 144 AAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS-SVEGYTDPVV 202
           A     QI  GL  LHQ  I++RDLKPEN L  N   D  ++I D GL+  ++       
Sbjct: 99  ACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDN---DGNVRISDLGLAVELKDGQSKTK 155

Query: 203 GLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQ----SNRQKQQMIMA 258
           G  G+  +++PE L  +      D ++LGV LY +++   PF A+     N++ +Q I+ 
Sbjct: 156 GYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILN 215

Query: 259 GEFSFYEQTWKNISSSAKQLISSLLTVDPNRR-----PSAQELLNHP 300
              ++ ++     S ++K    +LL  DP +R      +   L  HP
Sbjct: 216 DSVTYPDK----FSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHP 258

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 74.3 bits (182), Expect = 8e-15
 Identities = 53/196 (27%), Positives = 89/196 (45%), Gaps = 8/196 (4%)

Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIV---AQERYM-EVGAAAVIRQIAEGLA 156
           HPNVI   D + + N ++++LEL   G+L   I     Q+R + E        Q+   + 
Sbjct: 61  HPNVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVE 120

Query: 157 ALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV-EGYTDPVVGLFGSIDYVSPEA 215
            +H   ++HRD+KP N           +K+ D GL       T     L G+  Y+SPE 
Sbjct: 121 HMHSRRVMHRDIKPANVFITATGV---VKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPER 177

Query: 216 LLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSA 275
           + ++    KSD+WSLG +LY + +   PF               +  +     ++ S   
Sbjct: 178 IHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPTEHYSEKL 237

Query: 276 KQLISSLLTVDPNRRP 291
           ++L+S  +  DP++RP
Sbjct: 238 RELVSMCIYPDPDQRP 253

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 74.3 bits (182), Expect = 8e-15
 Identities = 55/196 (28%), Positives = 90/196 (45%), Gaps = 8/196 (4%)

Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRI---VAQERYM-EVGAAAVIRQIAEGLA 156
           HPNVI  Y  + + N ++++LEL   G+L   I     Q+R + E        Q+   L 
Sbjct: 61  HPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALE 120

Query: 157 ALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV-EGYTDPVVGLFGSIDYVSPEA 215
            +H   ++HRD+KP N +F+       +K+ D GL       T     L G+  Y+SPE 
Sbjct: 121 HMHSRRVMHRDIKPAN-VFIT--ATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPER 177

Query: 216 LLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSA 275
           + ++    KSD+WSLG +LY + +   PF               +  +      + S   
Sbjct: 178 IHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEEL 237

Query: 276 KQLISSLLTVDPNRRP 291
           +QL++  +  DP +RP
Sbjct: 238 RQLVNMCINPDPEKRP 253

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 74.2 bits (182), Expect = 1e-14
 Identities = 81/291 (27%), Positives = 122/291 (41%), Gaps = 49/291 (16%)

Query: 17  ILGRGGFSVVRRGIKKTCGETN-QVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRK 75
           ++G G F  V RGI K  G     VAIKTL+                      G+   ++
Sbjct: 12  VIGAGEFGEVFRGILKMPGRKEVAVAIKTLKP---------------------GYTEKQR 50

Query: 76  QVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA 135
           Q  +S+A +  +             H N+I L  V        +I E    G L D+ + 
Sbjct: 51  QDFLSEASIMGQF-----------SHHNIIRLEGVVTKFKPAMIITEYMENGAL-DKYLR 98

Query: 136 QE--RYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS 193
                +       ++R IA G+  L   N VHRDL   N L  ++ E    K+ DFGLS 
Sbjct: 99  DHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLE---CKVSDFGLSR 155

Query: 194 V-----EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQ 247
           V     EG T    G    I + +PEA+   + TS SD+WS G++++ ++S G  P+   
Sbjct: 156 VLEDDPEG-TYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDM 214

Query: 248 SNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN 298
           SN +  + I  G   F      +  S+  QL+      D  RRP   +++N
Sbjct: 215 SNHEVMKAINDG---FRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVN 262

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 74.3 bits (182), Expect = 1e-14
 Identities = 66/233 (28%), Positives = 105/233 (45%), Gaps = 23/233 (9%)

Query: 87  EILVMRKIVENVSPHPNVIDLYDVY---EDQNG--VHLILELCSGGELFDRIVA----QE 137
           EI     I++ +S HPNV+  Y +Y   + +NG  + L+LELC+GG + D +       E
Sbjct: 60  EIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGE 119

Query: 138 RYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFG----LSS 193
           R  E   A ++ +   GL  LH    +HRD+K  N L   +     +K++DFG    L+S
Sbjct: 120 RMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTE---GGVKLVDFGVSAQLTS 176

Query: 194 VEGYTDPVVG--LFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQ 251
                +  VG   + + + ++ E  L     ++ D+WSLG+    L  G PP       +
Sbjct: 177 TRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMR 236

Query: 252 KQQMIMAGEFSFYEQT--WKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
               I         Q   W   S+     I   LT D  +RP+  +LL H ++
Sbjct: 237 ALFKIPRNPPPTLHQPELW---SNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI 286

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 73.4 bits (180), Expect = 2e-14
 Identities = 60/222 (27%), Positives = 112/222 (50%), Gaps = 21/222 (9%)

Query: 89  LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIV-AQERYMEVGAAAV 147
           L+ ++I+E V+  P +++L   +E +  + L++ L +GG+L   I    ER +E+    V
Sbjct: 41  LLEKEILEKVNS-PFIVNLAYAFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEM--ERV 97

Query: 148 IR---QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGL 204
           I    QI  G+  LH  +IV+RD+KPEN L L+D+ +  L   D GL+        +   
Sbjct: 98  IHYSAQITCGILHLHSMDIVYRDMKPENVL-LDDQGNCRLS--DLGLAVELKDGKTITQR 154

Query: 205 FGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQK------QQMIMA 258
            G+  Y++PE L ++  +   D +++G  +Y +++G  PF  + +++K      ++  + 
Sbjct: 155 AGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPF--KDHKEKVAKEELKRRTLE 212

Query: 259 GEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHP 300
            E  F  Q   N +  +K +    L   P  R  ++E  + P
Sbjct: 213 DEVKFEHQ---NFTEESKDICRLFLAKKPEDRLGSREKNDDP 251

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 73.4 bits (180), Expect = 2e-14
 Identities = 80/298 (26%), Positives = 132/298 (44%), Gaps = 53/298 (17%)

Query: 13  EVTDILGRGGFSVVRRGIKKTCGE-TNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFF 71
           ++ +++G G F  V RG  K  G+    VAIKTL+                      G+ 
Sbjct: 7   KIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLK---------------------SGYT 45

Query: 72  PTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFD 131
             +++  +S+A +  +             HPN+I L  V      V +I E    G L D
Sbjct: 46  EKQRRDFLSEASIMGQF-----------DHPNIIHLEGVVTKSRPVMIITEFMENGAL-D 93

Query: 132 RIVAQE--RYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPL--KIM 187
             + Q   ++  +    ++R IA G+  L + N VHRDL   N L      +S L  K+ 
Sbjct: 94  SFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILV-----NSNLVCKVS 148

Query: 188 DFGLSSV--EGYTDPV----VGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-G 240
           DFGLS    +  +DP     +G    I + +PEA+   + TS SD+WS G++++ ++S G
Sbjct: 149 DFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYG 208

Query: 241 YPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN 298
             P+   SN   Q +I A E  +      +  ++  QL+      D N RP   ++++
Sbjct: 209 ERPYWDMSN---QDVINAIEQDYRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVS 263

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional

 Score = 74.5 bits (183), Expect = 2e-14
 Identities = 66/247 (26%), Positives = 109/247 (44%), Gaps = 47/247 (19%)

Query: 93  KIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVI-RQI 151
            I++ +S H  +I+L   Y  ++ V +++      +LF  +      + +  A  I R++
Sbjct: 138 DILKTIS-HRAIINLIHAYRWKSTVCMVMPKYKC-DLFTYVDRSGP-LPLEQAITIQRRL 194

Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEG---YTDPVVGLFGSI 208
            E LA LH   I+HRD+K EN +FL++ E++ L   DFG +        T    G  G++
Sbjct: 195 LEALAYLHGRGIIHRDVKTEN-IFLDEPENAVLG--DFGAACKLDAHPDTPQCYGWSGTL 251

Query: 209 DYVSPEALLQDRITSKSDMWSLGVILY-ILLSGYPPFIAQSNRQKQQM--------IMAG 259
           +  SPE L  D   +K+D+WS G++L+ + +     F  Q      Q+        +   
Sbjct: 252 ETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPL 311

Query: 260 EFSFYEQTWKNISSSAKQ--------------------------LISSLLTVDPNRRPSA 293
           EF     T  N+    KQ                          LI+ +LT D   RPSA
Sbjct: 312 EFPQNGST--NLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSA 369

Query: 294 QELLNHP 300
           Q++L+ P
Sbjct: 370 QDILSLP 376

Length = 392

>gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional

 Score = 75.9 bits (186), Expect = 2e-14
 Identities = 75/249 (30%), Positives = 110/249 (44%), Gaps = 45/249 (18%)

Query: 84  LTNEILVMRKIVENVSPHPNVIDLYDVYEDQ--NGVHLILELCSGGELFDRIVAQERYME 141
           L  E+ VMR++      H N++   D + ++    +++++E C  G+L   I  Q+ Y  
Sbjct: 59  LVIEVNVMREL-----KHKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNI--QKCYKM 111

Query: 142 VGA------AAVIRQIAEGLAALHQ-------ANIVHRDLKPENCLFL------------ 176
            G         + RQ+   LA  H          ++HRDLKP+N +FL            
Sbjct: 112 FGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQN-IFLSTGIRHIGKITA 170

Query: 177 --NDREDSPL-KIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRIT--SKSDMWSLG 231
             N+    P+ KI DFGLS   G         G+  Y SPE LL +  +   KSDMW+LG
Sbjct: 171 QANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALG 230

Query: 232 VILYILLSGYPPFIAQSN-RQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR 290
            I+Y L SG  PF   +N  Q    +  G     +   K  S     LI +LL +    R
Sbjct: 231 CIIYELCSGKTPFHKANNFSQLISELKRGP----DLPIKGKSKELNILIKNLLNLSAKER 286

Query: 291 PSAQELLNH 299
           PSA + L +
Sbjct: 287 PSALQCLGY 295

Length = 1021

>gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

 Score = 72.7 bits (178), Expect = 2e-14
 Identities = 60/234 (25%), Positives = 103/234 (44%), Gaps = 44/234 (18%)

Query: 18  LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQV 77
           LG G F  V++G+ K   +   VAIK L+                             + 
Sbjct: 3   LGSGNFGCVKKGVYKMRKKQIDVAIKVLK--------------------------NENEK 36

Query: 78  SVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE 137
           SV D ++  E  +M ++      +P ++ +  V E +  + L++E+ SGG L   +  ++
Sbjct: 37  SVRDEMMR-EAEIMHQL-----DNPYIVRMIGVCEAEA-LMLVMEMASGGPLNKFLSGKK 89

Query: 138 RYMEV-GAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEG 196
             + V     ++ Q++ G+  L   N VHRDL   N L +N       KI DFGLS   G
Sbjct: 90  DEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHY---AKISDFGLSKALG 146

Query: 197 -----YTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPF 244
                Y     G +  + + +PE +   + +S+SD+WS G+ ++   S G  P+
Sbjct: 147 ADDSYYKARSAGKW-PLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPY 199

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 72.8 bits (178), Expect = 4e-14
 Identities = 85/341 (24%), Positives = 134/341 (39%), Gaps = 104/341 (30%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLR-RIGSTTPYGFPGSRGSSSSSQI 68
           D YE  + LG G ++ V +G  K  G+   VA+K +R +    TP               
Sbjct: 5   DSYEKLEKLGEGSYATVYKGKSKVNGKL--VALKVIRLQEEEGTP--------------- 47

Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILE-----L 123
             F   ++ S+   L                 H N++ L+D+   +  + L+ E     L
Sbjct: 48  --FTAIREASLLKGL----------------KHANIVLLHDIIHTKETLTLVFEYVHTDL 89

Query: 124 CSGGELFDRIVAQERYMEVGAAAV--------IRQIAEGLAALHQANIVHRDLKPENCLF 175
           C             +YM+     +        + Q+  GL+ +HQ  I+HRDLKP+N L 
Sbjct: 90  C-------------QYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLI 136

Query: 176 LNDREDSPLKIMDFGLSSVEG-----YTDPVVGLFGSIDYVSPEALL-QDRITSKSDMWS 229
            +  E   LK+ DFGL+  +      Y++ VV L+    Y  P+ LL     ++  DMW 
Sbjct: 137 SDTGE---LKLADFGLARAKSVPSHTYSNEVVTLW----YRPPDVLLGSTEYSTCLDMWG 189

Query: 230 LGVILYILLSGYPPFIAQSNRQKQQ---MIMAG-------------------EFSFY--- 264
           +G I   ++ G   F    + Q Q     ++ G                    F+ Y   
Sbjct: 190 VGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPK 249

Query: 265 --EQTWKNIS--SSAKQLISSLLTVDPNRRPSAQELLNHPW 301
              Q W  +S  + A+ L S LL   P  R SAQ  L+H +
Sbjct: 250 NLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEY 290

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 72.0 bits (177), Expect = 4e-14
 Identities = 71/286 (24%), Positives = 115/286 (40%), Gaps = 47/286 (16%)

Query: 18  LGRGGFSVVRRGIKKT-CGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQ 76
           LG G F  V +G+     G+  +VA+KTL                      I      K+
Sbjct: 3   LGHGNFGSVVKGVYLMKSGKEVEVAVKTL------------------KQEHI---AAGKK 41

Query: 77  VSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ 136
             + +A       VM ++      HP ++ L  V + +  + L++EL   G L   +  +
Sbjct: 42  EFLREAS------VMAQL-----DHPCIVRLIGVCKGE-PLMLVMELAPLGPLLKYLKKR 89

Query: 137 ERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEG 196
                     +  Q+A G+A L   + VHRDL   N L +N  +    KI DFG+S   G
Sbjct: 90  REIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQ---AKISDFGMSRALG 146

Query: 197 -----YTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNR 250
                Y     G +  + + +PE +   + +SKSD+WS GV L+   S G  P+      
Sbjct: 147 AGSDYYRATTAGRW-PLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGA 205

Query: 251 QKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
           +   M+ +GE     +  +        ++ S     P  RP+  EL
Sbjct: 206 EVIAMLESGE--RLPRP-EECPQEIYSIMLSCWKYRPEDRPTFSEL 248

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 71.5 bits (175), Expect = 5e-14
 Identities = 61/249 (24%), Positives = 110/249 (44%), Gaps = 42/249 (16%)

Query: 18  LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQV 77
           LG G F  V++G+ K       VA+K L+                               
Sbjct: 3   LGSGNFGTVKKGMYKMKKSEKTVAVKILKN------------------------------ 32

Query: 78  SVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE 137
             +D  L +E+L    +++ +  +P ++ +  + E ++ + L++EL   G L ++ + + 
Sbjct: 33  DNNDPALKDELLREANVMQQLD-NPYIVRMIGICEAESWM-LVMELAELGPL-NKFLQKN 89

Query: 138 RYM-EVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV-- 194
           +++ E     ++ Q++ G+  L + N VHRDL   N L +        KI DFGLS    
Sbjct: 90  KHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHY---AKISDFGLSKALG 146

Query: 195 --EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQ 251
             E Y          + + +PE +   + +SKSD+WS GV+++   S G  P+      +
Sbjct: 147 ADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNE 206

Query: 252 KQQMIMAGE 260
             QMI +GE
Sbjct: 207 VTQMIESGE 215

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 71.6 bits (175), Expect = 6e-14
 Identities = 64/252 (25%), Positives = 113/252 (44%), Gaps = 31/252 (12%)

Query: 64  SSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYED--QNGVHLIL 121
           +  Q+ F P  ++ S     L  EI +++ +      H  ++  Y    D  +  + + +
Sbjct: 31  AVKQVPFDPDSQETSKEVNALECEIQLLKNL-----RHDRIVQYYGCLRDPEEKKLSIFV 85

Query: 122 ELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRED 181
           E   GG + D++ A     E       RQI +G++ LH   IVHRD+K  N L      D
Sbjct: 86  EYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANIL-----RD 140

Query: 182 SP--LKIMDFGLS----SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY 235
           S   +K+ DFG S    ++      +  + G+  ++SPE +  +    K+D+WS+   + 
Sbjct: 141 SAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVV 200

Query: 236 ILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWK-----NISSSAKQLISSLLTVDPNRR 290
            +L+  PP+        +   MA  F    Q  K      +S + +  +  +  V+  RR
Sbjct: 201 EMLTEKPPW-------AEYEAMAAIFKIATQPTKPMLPDGVSDACRDFLKQIF-VEEKRR 252

Query: 291 PSAQELLNHPWV 302
           P+A+ LL HP+V
Sbjct: 253 PTAEFLLRHPFV 264

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 71.7 bits (176), Expect = 6e-14
 Identities = 63/237 (26%), Positives = 102/237 (43%), Gaps = 46/237 (19%)

Query: 11  EYEVTDILGRGGFSVVRRGIKKTCGETNQ--VAIKTLRRIGSTTPYGFPGSRGSSSSSQI 68
           E E   +LG G F  V +G+    GE  +  VAIK LR                 ++ +I
Sbjct: 8   ELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLRE-----------ETSPKANKEI 56

Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
                            +E  VM  +      HP+V+ L  +      V LI +L   G 
Sbjct: 57  ----------------LDEAYVMASV-----DHPHVVRLLGICLSSQ-VQLITQLMPLGC 94

Query: 129 LFDRIVAQERYMEVGAAAVI---RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLK 185
           L D +  +     +G+  ++    QIA+G++ L +  +VHRDL   N L    +    +K
Sbjct: 95  LLDYV--RNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLV---KTPQHVK 149

Query: 186 IMDFGLSSVEGYTDPVVGLFGS---IDYVSPEALLQDRITSKSDMWSLGVILYILLS 239
           I DFGL+ +    +      G    I +++ E++L    T KSD+WS GV ++ L++
Sbjct: 150 ITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMT 206

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 72.0 bits (176), Expect = 6e-14
 Identities = 51/177 (28%), Positives = 85/177 (48%), Gaps = 25/177 (14%)

Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAA--------------- 145
           HPN++ L  V   +  + +I   CS  +L + +V +  + +VG+                
Sbjct: 67  HPNIVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADF 126

Query: 146 -AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGL 204
             ++ QIA G+  L   ++VH+DL   N L  +      +KI D GL   E Y      L
Sbjct: 127 VHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKLN---VKISDLGLFR-EVYAADYYKL 182

Query: 205 FGS----IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMI 256
            G+    I ++SPEA++  + +  SD+WS GV+L+ + S G  P+   SN+   +MI
Sbjct: 183 MGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMI 239

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 72.4 bits (177), Expect = 7e-14
 Identities = 43/155 (27%), Positives = 80/155 (51%), Gaps = 6/155 (3%)

Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           + + E  S +P ++ L+  ++  + + L++E  +GG+L   +  Q +  E  A     +I
Sbjct: 46  KHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQRQRKLPEEHARFYAAEI 105

Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYT--DPVVGLFGSID 209
              L  LH+  I++RDLK +N L      D  +K+ D+G+   EG    D      G+ +
Sbjct: 106 CIALNFLHERGIIYRDLKLDNVLL---DADGHIKLTDYGMCK-EGLGPGDTTSTFCGTPN 161

Query: 210 YVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF 244
           Y++PE L  +      D W+LGV+++ +++G  PF
Sbjct: 162 YIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPF 196

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 71.2 bits (174), Expect = 8e-14
 Identities = 45/149 (30%), Positives = 80/149 (53%), Gaps = 11/149 (7%)

Query: 101 HPNVIDLYDV-YEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIR---QIAEGLA 156
           H N++ L  V  E++ G++++ E  + G L D + ++ R + +G   +++    + E + 
Sbjct: 58  HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAME 116

Query: 157 ALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEAL 216
            L   N VHRDL   N L     ED+  K+ DFGL+     T     L   + + +PEAL
Sbjct: 117 YLEANNFVHRDLAARNVLV---SEDNVAKVSDFGLTKEASSTQDTGKL--PVKWTAPEAL 171

Query: 217 LQDRITSKSDMWSLGVILYILLS-GYPPF 244
            + + ++KSD+WS G++L+ + S G  P+
Sbjct: 172 REKKFSTKSDVWSFGILLWEIYSFGRVPY 200

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 70.4 bits (172), Expect = 2e-13
 Identities = 64/249 (25%), Positives = 110/249 (44%), Gaps = 31/249 (12%)

Query: 67  QIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYED--QNGVHLILELC 124
           Q+ F P   + S     L  EI +++ ++     H  ++  Y    D  +  + + +E  
Sbjct: 34  QVQFDPESPETSKEVNALECEIQLLKNLL-----HERIVQYYGCLRDPMERTLSIFMEHM 88

Query: 125 SGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSP- 183
            GG + D++ +     E       RQI EG++ LH   IVHRD+K  N L      DS  
Sbjct: 89  PGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANIL-----RDSVG 143

Query: 184 -LKIMDFG----LSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILL 238
            +K+ DFG    L ++      +  + G+  ++SPE +  +    K+D+WS+G  +  +L
Sbjct: 144 NVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEML 203

Query: 239 SGYPPFIAQSNRQKQQMIMAGEFSFYEQTWK-----NISSSAKQLISSLLTVDPNRRPSA 293
           +  PP+        +   MA  F    Q        ++S   +  +  +  V+   RPSA
Sbjct: 204 TEKPPW-------AEFEAMAAIFKIATQPTNPVLPPHVSDHCRDFLKRIF-VEAKLRPSA 255

Query: 294 QELLNHPWV 302
            ELL H +V
Sbjct: 256 DELLRHTFV 264

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 70.8 bits (173), Expect = 2e-13
 Identities = 63/248 (25%), Positives = 104/248 (41%), Gaps = 42/248 (16%)

Query: 87  EILVMRKIVENVSPHPNVIDLYDV-----YEDQNGVHLILELCSGGELFDRIVAQERYME 141
           E+ V+R +      HPNV+ L+DV      + +  + L+ E        D     ++  E
Sbjct: 51  EVAVLRHL--ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ----DLTTYLDKVPE 104

Query: 142 VGAAA-----VIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEG 196
            G        ++ Q+  GL  LH   +VHRDLKP+N L  +  +   +K+ DFGL+ +  
Sbjct: 105 PGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQ---IKLADFGLARIYS 161

Query: 197 YTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMI 256
           +   +  +  ++ Y +PE LLQ    +  D+WS+G I   +    P F   S+  +   I
Sbjct: 162 FQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKI 221

Query: 257 MAGEFSFYEQTWKN-----------------------ISSSAKQLISSLLTVDPNRRPSA 293
           +       E+ W                         I    K L+   LT +P +R SA
Sbjct: 222 LDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISA 281

Query: 294 QELLNHPW 301
              L+HP+
Sbjct: 282 YSALSHPY 289

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score = 73.0 bits (179), Expect = 2e-13
 Identities = 44/152 (28%), Positives = 73/152 (48%), Gaps = 11/152 (7%)

Query: 101 HPNVIDLYDVYEDQNG-VHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALH 159
           HPN++ L D  E   G +  + E   G  L + + A           ++ Q+ + LA  H
Sbjct: 37  HPNIVALLDSGEAPPGLLFAVFEYVPGRTLREVLAADGALPAGETGRLMLQVLDALACAH 96

Query: 160 QANIVHRDLKPENCLFLNDREDSP-LKIMDFGLSSV-EGYTDPVVG-------LFGSIDY 210
              IVHRDLKP+N + ++     P  K++DFG+ ++  G  D  V        + G+  Y
Sbjct: 97  NQGIVHRDLKPQN-IMVSQTGVRPHAKVLDFGIGTLLPGVRDADVATLTRTTEVLGTPTY 155

Query: 211 VSPEALLQDRITSKSDMWSLGVILYILLSGYP 242
            +PE L  + +T  SD+++ G+I    L+G  
Sbjct: 156 CAPEQLRGEPVTPNSDLYAWGLIFLECLTGQR 187

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 70.4 bits (172), Expect = 2e-13
 Identities = 78/299 (26%), Positives = 125/299 (41%), Gaps = 57/299 (19%)

Query: 18  LGRGGFSVVRRGIKKTC--GETN-QVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTR 74
           LG+G F +V  G  +    GE   +VA+KT+             +  +S   +I F    
Sbjct: 14  LGQGSFGMVYEGNARDIIKGEAETRVAVKTV-------------NESASLRERIEFL--- 57

Query: 75  KQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL--FDR 132
                      NE  VM+      + H +V+ L  V        +++EL + G+L  + R
Sbjct: 58  -----------NEASVMKGF----TCH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLR 101

Query: 133 IVAQERYMEVGAAA--------VIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPL 184
            +  E     G           +  +IA+G+A L+    VHRDL   NC+      D  +
Sbjct: 102 SLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMV---AHDFTV 158

Query: 185 KIMDFGLS----SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS- 239
           KI DFG++      + Y     GL   + +++PE+L     T+ SDMWS GV+L+ + S 
Sbjct: 159 KIGDFGMTRDIYETDYYRKGGKGLL-PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSL 217

Query: 240 GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN 298
              P+   SN Q  + +M G    Y     N       L+      +P  RP+  E++N
Sbjct: 218 AEQPYQGLSNEQVLKFVMDGG---YLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVN 273

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 70.2 bits (172), Expect = 2e-13
 Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 7/110 (6%)

Query: 146 AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS---VEGYTDPVV 202
            + +Q+A G+A L +   VHRDL   NCL     E+  +KI DFGLS       Y     
Sbjct: 134 CIAKQVAAGMAYLSERKFVHRDLATRNCLV---GENMVVKIADFGLSRNIYSADYYKASE 190

Query: 203 GLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQ 251
                I ++ PE++  +R T++SD+W+ GV+L+ + S G  P+   ++ +
Sbjct: 191 NDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEE 240

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 70.0 bits (171), Expect = 3e-13
 Identities = 74/312 (23%), Positives = 128/312 (41%), Gaps = 60/312 (19%)

Query: 9   TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQI 68
           TD +E+ + +G+G +  V +   K  G  +  A+K L                       
Sbjct: 21  TDTWEIIETIGKGTYGKVYKVTNKKDG--SLAAVKILD---------------------- 56

Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVY--EDQ---NGVHLILEL 123
                     +SD  +  EI     I++++  HPNV+  Y ++   D+     + L+LEL
Sbjct: 57  ---------PISD--VDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWLVLEL 105

Query: 124 CSGGELFDRI----VAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDR 179
           C+GG + + +    +  +R  E   + ++     GL  LH   I+HRD+K  N L   + 
Sbjct: 106 CNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTE- 164

Query: 180 EDSPLKIMDFG----LSSVEGYTDPVVG--LFGSIDYVSPEALLQDRITSKSDMWSLGVI 233
               +K++DFG    L+S     +  VG   + + + ++ E        ++ D+WSLG+ 
Sbjct: 165 --GGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGIT 222

Query: 234 LYILLSGYPPFIAQSNRQKQQMIMAGEFS---FYEQTWKNISSSAKQLISSLLTVDPNRR 290
              L  G PP +   +  K    +         + + W     S    IS  L  D   R
Sbjct: 223 AIELGDGDPP-LFDMHPVKTLFKIPRNPPPTLLHPEKW---CRSFNHFISQCLIKDFEAR 278

Query: 291 PSAQELLNHPWV 302
           PS   LL HP++
Sbjct: 279 PSVTHLLEHPFI 290

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 69.6 bits (170), Expect = 4e-13
 Identities = 62/235 (26%), Positives = 104/235 (44%), Gaps = 29/235 (12%)

Query: 87  EILVMRKIVENVSPHPNVIDLYDVY--------EDQNGVHLILELCSGGELFDRI--VAQ 136
           EI +   +++  S H N+   Y  +        +DQ  + L++E C  G + D +     
Sbjct: 58  EIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQ--LWLVMEFCGAGSVTDLVKNTKG 115

Query: 137 ERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEG 196
               E   A + R+I  GLA LH   ++HRD+K +N L     E++ +K++DFG+S+   
Sbjct: 116 NALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLL---TENAEVKLVDFGVSA--- 169

Query: 197 YTDPVVG----LFGSIDYVSPEALLQDR-----ITSKSDMWSLGVILYILLSGYPPFIAQ 247
             D  VG      G+  +++PE +  D         +SD+WSLG+    +  G PP    
Sbjct: 170 QLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDM 229

Query: 248 SNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
              +   +I        +   K  S      I   L  +   RPS ++LL HP++
Sbjct: 230 HPMRALFLIPRNPPPKLKS--KKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 69.5 bits (170), Expect = 8e-13
 Identities = 38/120 (31%), Positives = 65/120 (54%), Gaps = 3/120 (2%)

Query: 206 GSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYE 265
           G+ DY++PE  LQ     + D WSLG I++  L G+PPF ++++ +  + I+    + Y 
Sbjct: 210 GTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYF 269

Query: 266 QTWKNISSSAKQLISSLLTVDPNR--RPSAQELLNHPWVIG-DSAKEEEMDAEIVSRLQS 322
               ++S  A+ LI  L+T   NR  R  A E+ +HP+  G D     ++ A  + +L+S
Sbjct: 270 PDDIHLSVEAEDLIRRLITNAENRLGRGGAHEIKSHPFFRGVDWDTIRQIRAPFIPQLKS 329

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 68.7 bits (168), Expect = 1e-12
 Identities = 43/155 (27%), Positives = 81/155 (52%), Gaps = 6/155 (3%)

Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           + + E  S HP ++ L+  ++ ++ +  ++E  SGG+L   +  Q +  E  A     +I
Sbjct: 46  KHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSGGDLMFHMQRQRKLPEEHARFYSAEI 105

Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYT--DPVVGLFGSID 209
           +  L  LH+  I++RDLK +N L      +  +K+ D+G+   EG    D      G+ +
Sbjct: 106 SLALNFLHERGIIYRDLKLDNVLL---DAEGHIKLTDYGMCK-EGIRPGDTTSTFCGTPN 161

Query: 210 YVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF 244
           Y++PE L  +      D W+LGV+++ +++G  PF
Sbjct: 162 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 196

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 67.9 bits (166), Expect = 1e-12
 Identities = 63/244 (25%), Positives = 104/244 (42%), Gaps = 58/244 (23%)

Query: 17  ILGRGGFSVVRRG-IKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRK 75
           ++G+G F  V  G +  + G+    A+K+L RI                          +
Sbjct: 2   VIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDL-----------------------E 38

Query: 76  QVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGV-HLILELCSGGELFDRIV 134
           +V      L  E ++M+        HPNV+ L  +     G   ++L     G+L + I 
Sbjct: 39  EVE---QFLK-EGIIMKDF-----SHPNVLSLLGICLPSEGSPLVVLPYMKHGDLRNFIR 89

Query: 135 AQERYMEV-GAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS- 192
           ++     V        Q+A+G+  L     VHRDL   NC+     E   +K+ DFGL+ 
Sbjct: 90  SETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCML---DESFTVKVADFGLAR 146

Query: 193 --------SVEGYTD---PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-G 240
                   SV  +T    PV        +++ E+L   + T+KSD+WS GV+L+ L++ G
Sbjct: 147 DIYDKEYYSVHNHTGAKLPV-------KWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 199

Query: 241 YPPF 244
            PP+
Sbjct: 200 APPY 203

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 67.8 bits (165), Expect = 1e-12
 Identities = 79/299 (26%), Positives = 127/299 (42%), Gaps = 57/299 (19%)

Query: 18  LGRGGFSVVRRGIKKTCGE---TNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTR 74
           LG+G F +V  GI K   +     +VAIKT+             +  +S   +I F    
Sbjct: 14  LGQGSFGMVYEGIAKGVVKDEPETRVAIKTV-------------NEAASMRERIEFL--- 57

Query: 75  KQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIV 134
                      NE  VM++     + H +V+ L  V        +I+EL + G+L   + 
Sbjct: 58  -----------NEASVMKEF----NCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR 101

Query: 135 AQERYMEVGAA----------AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPL 184
           +    ME               +  +IA+G+A L+    VHRDL   NC+     ED  +
Sbjct: 102 SLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMV---AEDFTV 158

Query: 185 KIMDFGLS----SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILLS 239
           KI DFG++      + Y     GL   + ++SPE+L     T+ SD+WS GV+L+ I   
Sbjct: 159 KIGDFGMTRDIYETDYYRKGGKGLL-PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATL 217

Query: 240 GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN 298
              P+   SN Q  + +M G     ++   N      +L+      +P  RPS  E+++
Sbjct: 218 AEQPYQGMSNEQVLRFVMEG--GLLDKP-DNCPDMLFELMRMCWQYNPKMRPSFLEIIS 273

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 67.7 bits (165), Expect = 2e-12
 Identities = 56/187 (29%), Positives = 79/187 (42%), Gaps = 42/187 (22%)

Query: 150 QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEG-----YTDPVVGL 204
           Q+  GLA +H  +I+HRDLKP+N L     E   LK+ DFGL+  +      Y+  VV L
Sbjct: 111 QLLRGLAYIHGQHILHRDLKPQNLLISYLGE---LKLADFGLARAKSIPSQTYSSEVVTL 167

Query: 205 FGSIDYVSPEALL-QDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSF 263
           +    Y  P+ LL     +S  D+W  G I   +L G P F   S+  +Q   +      
Sbjct: 168 W----YRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGV 223

Query: 264 -YEQTWKNISS----------------------------SAKQLISSLLTVDPNRRPSAQ 294
             E TW  +S                              A+ L S +L + P  R SAQ
Sbjct: 224 PTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQ 283

Query: 295 ELLNHPW 301
           + L HP+
Sbjct: 284 DALLHPY 290

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 66.8 bits (163), Expect = 2e-12
 Identities = 60/207 (28%), Positives = 97/207 (46%), Gaps = 18/207 (8%)

Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE--RYMEVGAAAVIRQIAEGLAAL 158
           HPN+I L  V      V ++ E    G L D  + +   ++  +    ++R IA G+  L
Sbjct: 64  HPNIIHLEGVVTKSKPVMIVTEYMENGSL-DAFLRKHDGQFTVIQLVGMLRGIASGMKYL 122

Query: 159 HQANIVHRDLKPENCLFLNDREDSPL--KIMDFGLSSV-EGYTDPVVGLFGS---IDYVS 212
                VHRDL   N L      +S L  K+ DFGLS V E   +      G    I + +
Sbjct: 123 SDMGYVHRDLAARNILV-----NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTA 177

Query: 213 PEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNI 271
           PEA+   + TS SD+WS G++++ ++S G  P+   SN   Q +I A E  +      + 
Sbjct: 178 PEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSN---QDVIKAIEEGYRLPAPMDC 234

Query: 272 SSSAKQLISSLLTVDPNRRPSAQELLN 298
            ++  QL+      D N RP  +++++
Sbjct: 235 PAALHQLMLDCWQKDRNERPKFEQIVS 261

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 67.2 bits (164), Expect = 2e-12
 Identities = 70/271 (25%), Positives = 121/271 (44%), Gaps = 50/271 (18%)

Query: 72  PTRKQVSVSDALLTNEILVMRKIVENVS-----PHPNVIDLYDVYEDQNGVHLILELCSG 126
            TR+ ++V    L   + + ++I+  +        P +I  Y  +  +N + +  E   G
Sbjct: 24  LTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFMDG 83

Query: 127 GEL--FDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPL 184
           G L  + +I   E  +   A AV++    GL  L    I+HRD+KP N L +N R    +
Sbjct: 84  GSLDVYRKI--PEHVLGRIAVAVVK----GLTYLWSLKILHRDVKPSNML-VNTR--GQV 134

Query: 185 KIMDFGLSS--VEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYP 242
           K+ DFG+S+  V       VG   +  Y++PE +  ++    SD+WSLG+    L  G  
Sbjct: 135 KLCDFGVSTQLVNSIAKTYVG---TNAYMAPERISGEQYGIHSDVWSLGISFMELALGRF 191

Query: 243 PFIA-QSNR------QKQQMIM--------AGEFSFYEQTWKNISSSAKQLISSLLTVDP 287
           P+   Q N+      Q  Q I+         G+F          S      I+  +   P
Sbjct: 192 PYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQF----------SEKFVHFITQCMRKQP 241

Query: 288 NRRPSAQELLNHPWVIGDSAKEEEMDAEIVS 318
             RP+ + L++HP+++    +  + +AE+VS
Sbjct: 242 KERPAPENLMDHPFIV----QYNDGNAEVVS 268

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

 Score = 66.4 bits (162), Expect = 4e-12
 Identities = 61/231 (26%), Positives = 95/231 (41%), Gaps = 30/231 (12%)

Query: 95  VENVSP-----HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIR 149
           ++ V P     HPNV+       +     L+LE C  G+L    +   R M    A    
Sbjct: 43  LQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGDL-KNYLRSNRGMVAQMAQKDV 101

Query: 150 Q------IAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV---EGYTDP 200
                  +A GL  LHQA+ +H DL   NC       D  +KI D+GL+     E Y   
Sbjct: 102 LQRMACEVASGLLWLHQADFIHSDLALRNCQLT---ADLSVKIGDYGLALEQYPEDYYIT 158

Query: 201 VVGLFGSIDYVSPEA-------LLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQK 252
                  + +++PE        LL    T KS++WSLGV ++ L +    P+   S+ Q 
Sbjct: 159 KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQV 218

Query: 253 -QQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQE---LLNH 299
            +Q++   +    +       S     +     +DP  RP+A+E   LL +
Sbjct: 219 LKQVVREQDIKLPKPQLDLKYSDRWYEVMQFCWLDPETRPTAEEVHELLTY 269

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 66.0 bits (161), Expect = 5e-12
 Identities = 69/249 (27%), Positives = 104/249 (41%), Gaps = 70/249 (28%)

Query: 18  LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQV 77
           LG G F  V  G         +VAIK+L++ GS +P  F                     
Sbjct: 14  LGAGQFGEVWMGYYNG---HTKVAIKSLKQ-GSMSPEAF--------------------- 48

Query: 78  SVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE 137
                    E  +M+++      HP ++ LY V   Q  +++I E    G L D +   E
Sbjct: 49  -------LAEANLMKQL-----QHPRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPE 95

Query: 138 -------RYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFG 190
                  + +++ A     QIAEG+A + + N +HRDL+  N L     E    KI DFG
Sbjct: 96  GIKLTINKLIDMAA-----QIAEGMAFIERKNYIHRDLRAANILV---SETLCCKIADFG 147

Query: 191 LSSV---------EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILLSG 240
           L+ +         EG   P       I + +PEA+     T KSD+WS G++L  I+  G
Sbjct: 148 LARLIEDNEYTAREGAKFP-------IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYG 200

Query: 241 YPPFIAQSN 249
             P+   +N
Sbjct: 201 RIPYPGMTN 209

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 65.8 bits (160), Expect = 5e-12
 Identities = 56/225 (24%), Positives = 102/225 (45%), Gaps = 17/225 (7%)

Query: 82  ALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYME 141
           +L+  EI ++++       H N++  +  Y  +  + + +E C GG L D         E
Sbjct: 51  SLIQQEIFMVKE-----CKHCNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHVTGPLSE 105

Query: 142 VGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDP 200
           +  A V R+  +GLA LH    +HRD+K  N L L D  D  +K+ DFG+++ +      
Sbjct: 106 LQIAYVCRETLQGLAYLHSKGKMHRDIKGANIL-LTDNGD--VKLADFGVAAKITATIAK 162

Query: 201 VVGLFGSIDYVSPEALLQDR---ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIM 257
                G+  +++PE    ++        D+W++G+    L    PP         + + +
Sbjct: 163 RKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMF--DLHPMRALFL 220

Query: 258 AGEFSFYEQTWKN---ISSSAKQLISSLLTVDPNRRPSAQELLNH 299
             + +F     K+    SS+    +   LT +P +RP+A+ LL H
Sbjct: 221 MSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTH 265

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|238008 cd00051, EFh, EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands

 Score = 60.3 bits (147), Expect = 7e-12
 Identities = 21/68 (30%), Positives = 40/68 (58%), Gaps = 6/68 (8%)

Query: 438 LRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTF 497
           LR  F+++D D  G I+ +E+ + L++L +      ++E  ++DE+   +D + DGK+ F
Sbjct: 2   LREAFRLFDKDGDGTISADELKAALKSLGEG-----LSEE-EIDEMIREVDKDGDGKIDF 55

Query: 498 DEFRAAMQ 505
           +EF   M 
Sbjct: 56  EEFLELMA 63

Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers. Length = 63

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 65.3 bits (159), Expect = 1e-11
 Identities = 54/166 (32%), Positives = 83/166 (50%), Gaps = 19/166 (11%)

Query: 101 HPNVIDLYDVYEDQ--NGVHLILELCSGGELFDRIVAQERYMEVGAAAVI---RQIAEGL 155
           H N++       +Q   G+ LI+E    G L D +   +    +  A ++   +QI EG+
Sbjct: 65  HENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPKHK----LNLAQLLLFAQQICEGM 120

Query: 156 AALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV--EGYTDPVVGLFGS--IDYV 211
           A LH  + +HRDL   N L  NDR    +KI DFGL+    EG+    V   G   + + 
Sbjct: 121 AYLHSQHYIHRDLAARNVLLDNDR---LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY 177

Query: 212 SPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQK-QQMI 256
           + E L +++ +  SD+WS GV LY LL+       QS  +K ++MI
Sbjct: 178 AVECLKENKFSYASDVWSFGVTLYELLTHCDSK--QSPPKKFEEMI 221

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 65.0 bits (158), Expect = 1e-11
 Identities = 50/178 (28%), Positives = 85/178 (47%), Gaps = 26/178 (14%)

Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAA-------------- 146
           HPN++ L  V   +  V ++ E  + G+L + ++ +  + +VG ++              
Sbjct: 66  HPNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGD 125

Query: 147 ---VIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS----SVEGYTD 199
              +  QIA G+  L     VH+DL   N L     E   +KI D GLS    S + Y  
Sbjct: 126 FLHIAIQIAAGMEYLSSHFFVHKDLAARNILI---GEQLHVKISDLGLSREIYSADYYRV 182

Query: 200 PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMI 256
               L   I ++ PEA++  + +S SD+WS GV+L+ + S G  P+   SN++  +M+
Sbjct: 183 QPKSLL-PIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMV 239

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 64.6 bits (157), Expect = 2e-11
 Identities = 60/193 (31%), Positives = 90/193 (46%), Gaps = 19/193 (9%)

Query: 119 LILELCSGGELFDRI----VAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCL 174
            IL+L +GG+L   +    V  E  M   AA +I     GL  +H   +V+RDLKP N L
Sbjct: 74  FILDLMNGGDLHYHLSQHGVFSEAEMRFYAAEIIL----GLEHMHNRFVVYRDLKPANIL 129

Query: 175 FLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQD-RITSKSDMWSLGVI 233
                E   ++I D GL+       P   + G+  Y++PE L +     S +D +SLG +
Sbjct: 130 L---DEHGHVRISDLGLACDFSKKKPHASV-GTHGYMAPEVLQKGVAYDSSADWFSLGCM 185

Query: 234 LYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR--- 290
           L+ LL G+ PF     + K + I     +   +   + S   + L+  LL  D NRR   
Sbjct: 186 LFKLLRGHSPFRQHKTKDKHE-IDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGC 244

Query: 291 --PSAQELLNHPW 301
               AQE+  HP+
Sbjct: 245 LGRGAQEVKEHPF 257

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 64.8 bits (158), Expect = 2e-11
 Identities = 52/220 (23%), Positives = 96/220 (43%), Gaps = 31/220 (14%)

Query: 93  KIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEV--GAAAVIRQ 150
           KI+ ++  H N+++L         + +I E C  G+L + +  +           +   Q
Sbjct: 90  KIMSHLGNHENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQ 149

Query: 151 IAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS---------VEGYTDPV 201
           +A+G+A L   N +HRDL   N L  + +    +KI DFGL+          V+G     
Sbjct: 150 VAKGMAFLASKNCIHRDLAARNVLLTHGK---IVKICDFGLARDIMNDSNYVVKGNA--- 203

Query: 202 VGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS----GYPPFIAQSNRQKQQMIM 257
                 + +++PE++     T +SD+WS G++L+ + S     YP     S   K  +I 
Sbjct: 204 ---RLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYK--LIK 258

Query: 258 AG-EFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
            G   +  E     I      ++ +    DP +RP+ +++
Sbjct: 259 EGYRMAQPEHAPAEIYD----IMKTCWDADPLKRPTFKQI 294

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 64.4 bits (157), Expect = 2e-11
 Identities = 41/115 (35%), Positives = 61/115 (53%), Gaps = 9/115 (7%)

Query: 150 QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGS-- 207
           QIA G+  L   + VHRDL   NCL      D  +KI DFG+S  + YT     + G   
Sbjct: 130 QIASGMVYLASQHFVHRDLATRNCLV---GYDLVVKIGDFGMSR-DVYTTDYYRVGGHTM 185

Query: 208 --IDYVSPEALLQDRITSKSDMWSLGVILY-ILLSGYPPFIAQSNRQKQQMIMAG 259
             I ++ PE+++  + T++SD+WS GV+L+ I   G  P+   SN +  + I  G
Sbjct: 186 LPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQG 240

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 64.2 bits (156), Expect = 3e-11
 Identities = 57/210 (27%), Positives = 88/210 (41%), Gaps = 46/210 (21%)

Query: 39  QVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENV 98
           QVA+K+L+          P S G+  +                  L  EI ++R +    
Sbjct: 35  QVAVKSLK----------PESGGNHIAD-----------------LKKEIEILRNLY--- 64

Query: 99  SPHPNVIDLYDVYEDQ--NGVHLILELCSGG---ELFDRIVAQERYMEVGAAAVIRQIAE 153
             H N++    +  +   NG+ LI+E    G   E   R   +    +    AV  QI +
Sbjct: 65  --HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAV--QICK 120

Query: 154 GLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV----EGYTDPVVGLFGSID 209
           G+  L     VHRDL   N L  ++ +   +KI DFGL+      + Y      L   + 
Sbjct: 121 GMDYLGSRQYVHRDLAARNVLVESEHQ---VKIGDFGLTKAIETDKEYYTVKDDLDSPVF 177

Query: 210 YVSPEALLQDRITSKSDMWSLGVILYILLS 239
           + +PE L+Q +    SD+WS GV LY LL+
Sbjct: 178 WYAPECLIQSKFYIASDVWSFGVTLYELLT 207

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 64.2 bits (156), Expect = 3e-11
 Identities = 57/219 (26%), Positives = 93/219 (42%), Gaps = 27/219 (12%)

Query: 98  VSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQ------- 150
           +  HPN+I+L    E +  ++L +E    G L D  + + R +E   A  I         
Sbjct: 64  LGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLD-FLRKSRVLETDPAFAIANSTASTLS 122

Query: 151 ----------IAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS-SVEGYTD 199
                     +A G+  L Q   +HRDL   N L     E+   KI DFGLS   E Y  
Sbjct: 123 SQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV---GENYVAKIADFGLSRGQEVYVK 179

Query: 200 PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMA 258
             +G    + +++ E+L     T+ SD+WS GV+L+ ++S G  P+   +  +  + +  
Sbjct: 180 KTMGRL-PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ 238

Query: 259 GEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELL 297
           G   +  +   N       L+       P  RPS  ++L
Sbjct: 239 G---YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 274

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 63.6 bits (155), Expect = 4e-11
 Identities = 54/187 (28%), Positives = 85/187 (45%), Gaps = 33/187 (17%)

Query: 84  LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA---QERYM 140
           L +E+ +M+ I +    H N+I+L  V   +  +++++E  + G L D + A      Y 
Sbjct: 62  LVSEMEMMKMIGK----HKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYA 117

Query: 141 EVGAAAVIR-------------QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIM 187
                                 Q+A G+  L     +HRDL   N L     ED  +KI 
Sbjct: 118 SPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLV---TEDHVMKIA 174

Query: 188 DFGLS----SVEGYTDPVVGLFGSIDYVSPEALLQDRI-TSKSDMWSLGVILY--ILLSG 240
           DFGL+     ++ Y     G    + +++PEAL  DR+ T +SD+WS GV+L+    L G
Sbjct: 175 DFGLARDIHHIDYYRKTTNGRL-PVKWMAPEALF-DRVYTHQSDVWSFGVLLWEIFTLGG 232

Query: 241 YP-PFIA 246
            P P I 
Sbjct: 233 SPYPGIP 239

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 63.5 bits (154), Expect = 4e-11
 Identities = 41/118 (34%), Positives = 65/118 (55%), Gaps = 9/118 (7%)

Query: 147 VIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFG 206
           + +QIA G+  L   + VHRDL   NCL     E+  +KI DFG+S  + Y+     + G
Sbjct: 125 IAQQIAAGMVYLASQHFVHRDLATRNCLV---GENLLVKIGDFGMSR-DVYSTDYYRVGG 180

Query: 207 ----SIDYVSPEALLQDRITSKSDMWSLGVILY-ILLSGYPPFIAQSNRQKQQMIMAG 259
                I ++ PE+++  + T++SD+WSLGV+L+ I   G  P+   SN +  + I  G
Sbjct: 181 HTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQG 238

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed

 Score = 65.2 bits (159), Expect = 4e-11
 Identities = 72/317 (22%), Positives = 125/317 (39%), Gaps = 69/317 (21%)

Query: 12  YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFF 71
           Y++  ++G+GG   V       C    +VA+K +R   S  P                  
Sbjct: 4   YDIIRLIGKGGMGEVYLAYDPVCSR--RVALKKIREDLSENP------------------ 43

Query: 72  PTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFD 131
                      LL    L   KI  ++  HP ++ +Y +  D + V+  +    G  L  
Sbjct: 44  -----------LLKKRFLREAKIAADLI-HPGIVPVYSICSDGDPVYYTMPYIEGYTLKS 91

Query: 132 --------RIVAQERYMEVGAAAVIR---QIAEGLAALHQANIVHRDLKPENCL------ 174
                     +++E   +    A +    +I   +  +H   ++HRDLKP+N L      
Sbjct: 92  LLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGE 151

Query: 175 ----------FLNDREDSPLKIMDFGLSSVEGYTDPVVG-LFGSIDYVSPEALLQDRITS 223
                     F    E+  L I D    ++   +  + G + G+ DY++PE LL    + 
Sbjct: 152 VVILDWGAAIFKKLEEEDLLDI-DVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASE 210

Query: 224 KSDMWSLGVILYILLSGYPPFIAQSNRQ---KQQMIMAGEFSFYEQTWKNISSSAKQLIS 280
            +D+++LGVILY +L+   P+  +  R+   +  ++   E + Y    + I     Q+  
Sbjct: 211 STDIYALGVILYQMLTLSFPYRRKKGRKISYRDVILSPIEVAPY----REIPPFLSQIAM 266

Query: 281 SLLTVDPNRR-PSAQEL 296
             L VDP  R  S QEL
Sbjct: 267 KALAVDPAERYSSVQEL 283

Length = 932

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score = 63.5 bits (154), Expect = 5e-11
 Identities = 73/296 (24%), Positives = 122/296 (41%), Gaps = 60/296 (20%)

Query: 16  DILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPY-GFPGSRGSSSSSQIGFFPTR 74
           D++G G F  V R + K  G     AIK L+   S   +  F G                
Sbjct: 8   DVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAG---------------- 51

Query: 75  KQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIV 134
                       E+ V+ K+      HPN+I+L    E++  +++ +E    G L D  +
Sbjct: 52  ------------ELEVLCKL----GHHPNIINLLGACENRGYLYIAIEYAPYGNLLD-FL 94

Query: 135 AQERYMEV--------GAAAVI--RQI-------AEGLAALHQANIVHRDLKPENCLFLN 177
            + R +E         G A+ +  +Q+       A G+  L +   +HRDL   N L   
Sbjct: 95  RKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLV-- 152

Query: 178 DREDSPLKIMDFGLS-SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYI 236
             E+   KI DFGLS   E Y    +G    + +++ E+L     T+KSD+WS GV+L+ 
Sbjct: 153 -GENLASKIADFGLSRGEEVYVKKTMGRL-PVRWMAIESLNYSVYTTKSDVWSFGVLLWE 210

Query: 237 LLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRP 291
           ++S G  P+   +  +  + +  G   +  +  +N      +L+       P  RP
Sbjct: 211 IVSLGGTPYCGMTCAELYEKLPQG---YRMEKPRNCDDEVYELMRQCWRDRPYERP 263

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases

 Score = 63.2 bits (153), Expect = 5e-11
 Identities = 71/296 (23%), Positives = 116/296 (39%), Gaps = 60/296 (20%)

Query: 16  DILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPY-GFPGSRGSSSSSQIGFFPTR 74
           D++G G F  V +   K  G     AIK ++   S   +  F G                
Sbjct: 1   DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAG---------------- 44

Query: 75  KQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIV 134
                       E+ V+ K+      HPN+I+L    E +  ++L +E    G L D  +
Sbjct: 45  ------------ELEVLCKL----GHHPNIINLLGACEHRGYLYLAIEYAPHGNLLD-FL 87

Query: 135 AQERYMEV--------GAAAVI--RQI-------AEGLAALHQANIVHRDLKPENCLFLN 177
            + R +E           A+ +  +Q+       A G+  L Q   +HRDL   N L   
Sbjct: 88  RKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV-- 145

Query: 178 DREDSPLKIMDFGLS-SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYI 236
             E+   KI DFGLS   E Y    +G    + +++ E+L     T+ SD+WS GV+L+ 
Sbjct: 146 -GENYVAKIADFGLSRGQEVYVKKTMGRL-PVRWMAIESLNYSVYTTNSDVWSYGVLLWE 203

Query: 237 LLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRP 291
           ++S G  P+   +  +  + +  G   +  +   N       L+       P  RP
Sbjct: 204 IVSLGGTPYCGMTCAELYEKLPQG---YRLEKPLNCDDEVYDLMRQCWREKPYERP 256

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 63.1 bits (153), Expect = 6e-11
 Identities = 43/118 (36%), Positives = 62/118 (52%), Gaps = 7/118 (5%)

Query: 146 AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPV-VG- 203
           A+  QIA G+  L   + VHRDL   NCL     +   +KI DFG+S     TD   VG 
Sbjct: 126 AIASQIASGMVYLASLHFVHRDLATRNCLV---GQGLVVKIGDFGMSRDIYSTDYYRVGG 182

Query: 204 -LFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILLSGYPPFIAQSNRQKQQMIMAG 259
                I ++ PE++L  + T++SD+WS GV+L+ I   G  P+   SN +  + I  G
Sbjct: 183 RTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQG 240

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2

 Score = 62.7 bits (152), Expect = 7e-11
 Identities = 74/294 (25%), Positives = 126/294 (42%), Gaps = 56/294 (19%)

Query: 17  ILGRGGFSVVRRGIKKTCGETNQ--VAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTR 74
           +LG G F  V +GI    GE  +  VAIK LR   +T+P                     
Sbjct: 14  VLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRE--NTSPK-------------------- 51

Query: 75  KQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIV 134
                ++  + +E  VM  +       P V  L  +      V L+ +L   G L D + 
Sbjct: 52  -----ANKEILDEAYVMAGVGS-----PYVCRLLGICLTST-VQLVTQLMPYGCLLDYV- 99

Query: 135 AQERYMEVGAAAVIR---QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGL 191
            +E    +G+  ++    QIA+G++ L +  +VHRDL   N L    +  + +KI DFGL
Sbjct: 100 -RENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLV---KSPNHVKITDFGL 155

Query: 192 SSV------EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPF 244
           + +      E + D   G    I +++ E++L  R T +SD+WS GV ++ L++ G  P+
Sbjct: 156 ARLLDIDETEYHAD---GGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPY 212

Query: 245 IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN 298
                R+   ++  GE           +     ++     +D   RP  +EL++
Sbjct: 213 DGIPAREIPDLLEKGE---RLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVD 263

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 63.0 bits (153), Expect = 1e-10
 Identities = 56/191 (29%), Positives = 85/191 (44%), Gaps = 49/191 (25%)

Query: 147 VIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGL-----SSVEGYTDPV 201
           ++ Q+  GL  +H A I+HRDLKP N L +N  ED  LKI+DFGL     + + GY   V
Sbjct: 122 LVYQMLCGLKYIHSAGIIHRDLKPGN-LAVN--EDCELKILDFGLARHADAEMTGY---V 175

Query: 202 VGLFGSIDYVSPEALLQ-DRITSKSDMWSLGVILYILLSGY------------------- 241
           V  +    Y +PE +L         D+WS+G I+  +L+G                    
Sbjct: 176 VTRW----YRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVT 231

Query: 242 ----PPFI-------AQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR 290
               P F+       A+S  +        +FS     +   S  A  L+  +L +D ++R
Sbjct: 232 GVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFS---TLFPKASPQAVDLLEKMLELDVDKR 288

Query: 291 PSAQELLNHPW 301
            +A E L HP+
Sbjct: 289 LTATEALEHPY 299

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 62.3 bits (151), Expect = 1e-10
 Identities = 59/213 (27%), Positives = 97/213 (45%), Gaps = 19/213 (8%)

Query: 102 PNVIDLYDVYEDQNGVHLILELCSGGELFDRI----VAQERYMEVGAAAVIRQIAEGLAA 157
           P ++ +   +   + +  IL+L +GG+L   +    V  E+ M   A  +I     GL  
Sbjct: 57  PFIVCMTYAFHTPDKLCFILDLMNGGDLHYHLSQHGVFSEKEMRFYATEIIL----GLEH 112

Query: 158 LHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALL 217
           +H   +V+RDLKP N L     E   ++I D GL+       P   + G+  Y++PE L 
Sbjct: 113 MHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKPHASV-GTHGYMAPEVLQ 168

Query: 218 QDRI-TSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAK 276
           +     S +D +SLG +L+ LL G+ PF     + K + I     +   +   + S   K
Sbjct: 169 KGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE-IDRMTLTVNVELPDSFSPELK 227

Query: 277 QLISSLLTVDPNRR-----PSAQELLNHPWVIG 304
            L+  LL  D ++R       AQE+  H +  G
Sbjct: 228 SLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKG 260

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

 Score = 61.4 bits (149), Expect = 1e-10
 Identities = 63/221 (28%), Positives = 99/221 (44%), Gaps = 44/221 (19%)

Query: 100 PH--PNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAE---G 154
           PH  PN++ L+     ++ V L+L+   GG+L+  I    +++ +    V R  AE    
Sbjct: 41  PHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHIS---KFLNIPEECVKRWAAEMVVA 97

Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFG-LSSVEGYTDPVVGLFGSID--YV 211
           L ALH+  IV RDL P N L L+DR    +++  F   S VE   D       +++  Y 
Sbjct: 98  LDALHREGIVCRDLNPNNIL-LDDR--GHIQLTYFSRWSEVEDSCDG-----EAVENMYC 149

Query: 212 SPEALLQDRITSKSDMWSLGVILYILLSG------YPPFIAQSNRQKQQMIMAGEFSFYE 265
           +PE       T   D WSLG IL+ LL+G      +P  I          +   E+    
Sbjct: 150 APEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI-----NTHTTLNIPEW---- 200

Query: 266 QTWKNISSSAKQLISSLLTVDPNRRPSA-----QELLNHPW 301
                +S  A+ L+  LL  +P  R  A     +++ +HP+
Sbjct: 201 -----VSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPF 236

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 63.7 bits (155), Expect = 1e-10
 Identities = 36/97 (37%), Positives = 55/97 (56%), Gaps = 1/97 (1%)

Query: 204 LFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSF 263
           + G+ DY++PE LL        D W+LGV L+  L+G PPF  ++ +Q  Q I+  +  +
Sbjct: 540 ILGTPDYLAPELLLGKPHGPAVDWWALGVCLFEFLTGIPPFNDETPQQVFQNILNRDIPW 599

Query: 264 YEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHP 300
            E   K +S +A+  I  LLT+DP +R   +EL  HP
Sbjct: 600 PEGEEK-LSVNAQNAIEILLTMDPTKRAGLKELKQHP 635

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 61.9 bits (150), Expect = 1e-10
 Identities = 58/216 (26%), Positives = 101/216 (46%), Gaps = 33/216 (15%)

Query: 72  PTRKQVSVSDALLTNEILVMRK-------IVENVSPHPNVIDLYDVYEDQNGVHLILELC 124
           PT+ ++ V+   L +  L  RK       ++ N+  H +++  Y V  D + + ++ E  
Sbjct: 31  PTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQ-HEHIVKFYGVCGDGDPLIMVFEYM 89

Query: 125 SGGELFDRIVAQ-------------ERYMEVGAAAVIR---QIAEGLAALHQANIVHRDL 168
             G+L   + A              +   E+G + ++    QIA G+  L   + VHRDL
Sbjct: 90  KHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDL 149

Query: 169 KPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFG----SIDYVSPEALLQDRITSK 224
              NCL   +     +KI DFG+S  + Y+     + G     I ++ PE+++  + T++
Sbjct: 150 ATRNCLVGANLL---VKIGDFGMSR-DVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTE 205

Query: 225 SDMWSLGVILY-ILLSGYPPFIAQSNRQKQQMIMAG 259
           SD+WS GVIL+ I   G  P+   SN +  + I  G
Sbjct: 206 SDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQG 241

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 61.9 bits (150), Expect = 2e-10
 Identities = 66/243 (27%), Positives = 110/243 (45%), Gaps = 47/243 (19%)

Query: 11  EYEVTDILGRGGFSVVRRGIKKTCGETNQ--VAIKTLRRIGSTTPYGFPGSRGSSSSSQI 68
           E++   +LG G F  V +G+    GE  +  VAIK LR   +T+P               
Sbjct: 8   EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSP--------------- 50

Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
                 K++        +E  VM  +      +P+V  L  +    + V LI +L   G 
Sbjct: 51  ---KANKEI-------LDEAYVMASV-----DNPHVCRLLGICL-TSTVQLITQLMPFGC 94

Query: 129 LFDRIVAQERYMEVGAAAVIR---QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLK 185
           L D +  +E    +G+  ++    QIA+G+  L +  +VHRDL   N L    +    +K
Sbjct: 95  LLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQH---VK 149

Query: 186 IMDFGLSSVEGYTDPVVGLFGS---IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GY 241
           I DFGL+ + G  +      G    I +++ E++L    T +SD+WS GV ++ L++ G 
Sbjct: 150 ITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 209

Query: 242 PPF 244
            P+
Sbjct: 210 KPY 212

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 61.5 bits (149), Expect = 2e-10
 Identities = 60/231 (25%), Positives = 95/231 (41%), Gaps = 48/231 (20%)

Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGEL--FDRIVAQ---------------------E 137
           HP+VI LY        + LI+E    G L  F R   +                     E
Sbjct: 62  HPHVIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDE 121

Query: 138 RYMEVGAAAVIR-QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEG 196
           R + +G       QI+ G+  L +  +VHRDL   N L    R+   +KI DFGLS    
Sbjct: 122 RALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRK---MKISDFGLSRDVY 178

Query: 197 YTDPVVGLFGS---IDYVSPEALLQDRITSKSDMWSLGVILY--ILLSGYP-PFIAQSNR 250
             D  V        + +++ E+L     T++SD+WS GV+L+  + L G P P IA    
Sbjct: 179 EEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERL 238

Query: 251 QKQQMIMAGEFSFYEQTWK-----NISSSAKQLISSLLTVDPNRRPSAQEL 296
                     F+  +  ++     N S     L+ +    +P++RP+  ++
Sbjct: 239 ----------FNLLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADI 279

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score = 61.6 bits (149), Expect = 2e-10
 Identities = 82/333 (24%), Positives = 136/333 (40%), Gaps = 90/333 (27%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQ-VAIKTLRRIGSTTPYGFPGSRGSSSSSQI 68
           +++EV  ++G G + VV +   K   ET + VAIK            F  S  +    + 
Sbjct: 1   NKFEVLGVVGEGAYGVVLKCRHK---ETKEIVAIKK-----------FKDSEENEEVKET 46

Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYE--DQNGVHLILELCSG 126
               T +++ +   L    I+ +++             LY V+E  ++N + L+ E+ +G
Sbjct: 47  ----TLRELKMLRTLKQENIVELKEAFRRRG------KLYLVFEYVEKNMLELLEEMPNG 96

Query: 127 GELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKI 186
               +++            + I Q+ + +   H+ +IVHRD+KPEN L      +  LK+
Sbjct: 97  V-PPEKV-----------RSYIYQLIKAIHWCHKNDIVHRDIKPENLLI---SHNDVLKL 141

Query: 187 MDFGLSS--VEG----YTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSG 240
            DFG +    EG    YT+ V   +    Y SPE LL        DMWS+G IL  L  G
Sbjct: 142 CDFGFARNLSEGSNANYTEYVATRW----YRSPELLLGAPYGKAVDMWSVGCILGELSDG 197

Query: 241 YPPFIAQSNRQK-------------QQMIMAGEFSFYE---------------QTWKN-- 270
            P F  +S   +             +QM +     FY                Q+ +   
Sbjct: 198 QPLFPGESEIDQLFTIQKVLGPLPAEQMKL-----FYSNPRFHGLRFPAVNHPQSLERRY 252

Query: 271 ---ISSSAKQLISSLLTVDPNRRPSAQELLNHP 300
              +S     L+ +LL ++P  R   ++ LNHP
Sbjct: 253 LGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHP 285

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 60.6 bits (147), Expect = 4e-10
 Identities = 72/301 (23%), Positives = 116/301 (38%), Gaps = 56/301 (18%)

Query: 17  ILGRGGFSVVRRG-IKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRK 75
           ILG G F  V  G + +  G   +VA+KT++    T              S+I  F    
Sbjct: 6   ILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHT-------------YSEIEEF---- 48

Query: 76  QVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDV---YEDQNGVH---LILELCSGGEL 129
              +S+A    +             HPNV+ L  V         +    +IL     G+L
Sbjct: 49  ---LSEAACMKDF-----------DHPNVMKLIGVCFEASSLQKIPKPMVILPFMKHGDL 94

Query: 130 -----FDRIVAQERYMEVGA-AAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSP 183
                + R+      + +      +  IA G+  L   N +HRDL   NC+    RED  
Sbjct: 95  HSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCML---REDMT 151

Query: 184 LKIMDFGLS----SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILL 238
           + + DFGLS    S + Y    +     + +++ E+L     TSKSD+W+ GV ++ I  
Sbjct: 152 VCVADFGLSKKIYSGDYYRQGRIAKM-PVKWIAIESLADRVYTSKSDVWAFGVTMWEIAT 210

Query: 239 SGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN 298
            G  P+    N +    +  G      +  ++       L+ S    DP  RP+  +L  
Sbjct: 211 RGQTPYPGVENHEIYDYLRHGN---RLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLRE 267

Query: 299 H 299
            
Sbjct: 268 V 268

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional

 Score = 61.8 bits (150), Expect = 4e-10
 Identities = 87/338 (25%), Positives = 134/338 (39%), Gaps = 70/338 (20%)

Query: 13  EVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGF-------PGSRGSSSS 65
           E  + L R     + RG    C   ++VA             GF       PGS G    
Sbjct: 139 EELERLDREAARAISRG----CKPPSEVA-------KVVAGLGFAIHRALTPGSEGCVFE 187

Query: 66  SQIGFFPTRKQVSVS-DALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELC 124
           S    +P R  V     A   +E  ++R++      HP V+ L DV     G+  ++   
Sbjct: 188 SSHPDYPQRVVVKAGWYASSVHEARLLRRL-----SHPAVLALLDVRV-VGGLTCLVLPK 241

Query: 125 SGGELFDRIVAQERYMEVG-AAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSP 183
              +L+  + A+ R + +    AV RQ+   +  +H   I+HRD+K EN + +N  ED  
Sbjct: 242 YRSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTEN-VLVNGPEDIC 300

Query: 184 LKIMDFGLSS-VEG-YTDPV-VGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY----- 235
           L   DFG +    G ++ P   G+ G++D  +PE L  D  T   D+WS G++++     
Sbjct: 301 LG--DFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVH 358

Query: 236 --ILLSG-----YPPFIAQSNRQKQQ-MIMAGEFSFYEQT-------------------- 267
              L S        P+ AQ  R  +Q  +   EF  +  +                    
Sbjct: 359 TASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTR 418

Query: 268 --WK---NISSSAKQLISSLLTVDPNRRPSAQELLNHP 300
             W     +    + L+   LT D  RRPSA ELL  P
Sbjct: 419 PAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLP 456

Length = 461

>gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional

 Score = 60.8 bits (147), Expect = 6e-10
 Identities = 59/239 (24%), Positives = 98/239 (41%), Gaps = 44/239 (18%)

Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HP++I L   +       LIL      +L+  + A+         A+ R +   +  LH+
Sbjct: 142 HPSIIQLKGTFTYNKFTCLILPRYKT-DLYCYLAAKRNIAICDILAIERSVLRAIQYLHE 200

Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLS--SVEGYTDPVVGLFGSIDYVSPEALLQ 218
             I+HRD+K EN +F+N   D  L   DFG +   V+   +   G  G+I   +PE L +
Sbjct: 201 NRIIHRDIKAEN-IFINHPGDVCLG--DFGAACFPVDINANKYYGWAGTIATNAPELLAR 257

Query: 219 DRITSKSDMWSLGVILYILLSG-----------------------------YP---PFIA 246
           D      D+WS G++L+ + +                              +P   P  A
Sbjct: 258 DPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDA 317

Query: 247 QSNRQKQQMIMAGEFSF---YEQTWKNISS---SAKQLISSLLTVDPNRRPSAQELLNH 299
           Q+N  +  + +A + S        W N+       + LI  +L  D + RPSA+ LL+ 
Sbjct: 318 QANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDF 376

Length = 391

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 59.7 bits (145), Expect = 7e-10
 Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 22/161 (13%)

Query: 150 QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGS-- 207
           QIA G+  L   N VHRDL   NCL    +  + +KI DFG+S    Y+     + G   
Sbjct: 138 QIASGMRYLESLNFVHRDLATRNCLV--GKNYT-IKIADFGMSR-NLYSSDYYRVQGRAP 193

Query: 208 --IDYVSPEALLQDRITSKSDMWSLGVILY-IL-LSGYPPFIAQSNRQKQQMIM-AGEFS 262
             I +++ E++L  + T+KSD+W+ GV L+ IL L    P+   ++   QQ+I  AG F 
Sbjct: 194 LPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTD---QQVIENAGHF- 249

Query: 263 FYEQTWKNISSSAKQ-------LISSLLTVDPNRRPSAQEL 296
           F +   +               L+      D   RP+ +E+
Sbjct: 250 FRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREI 290

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|173646 cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

 Score = 58.8 bits (142), Expect = 1e-09
 Identities = 63/257 (24%), Positives = 108/257 (42%), Gaps = 47/257 (18%)

Query: 73  TRKQVSVSDALLTNEILVMRKIVENVSP-----HPNVIDLYDVYEDQNGVHLILELCSGG 127
           T  QV V +  ++  +    K +E   P     H N++       +     L++E C  G
Sbjct: 21  TPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80

Query: 128 ELFDRIVAQERYMEVGAAAVIRQ-----IAEGLAALHQANIVHRDLKPENCLFLNDREDS 182
           +L   + +  +   +       Q     IA GL  LH+ N +H DL   NCL      D 
Sbjct: 81  DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLL---TADL 137

Query: 183 PLKIMDFGLSSVEGYTDPVVG---LFGSIDYVSPEALLQDRI---------TSKSDMWSL 230
            +KI D+GLS  +   D  V    L+  + +++PE  L D +         T +S++WSL
Sbjct: 138 TVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPE--LVDEVHGNLLVVDQTKESNVWSL 195

Query: 231 GVILYILLS-GYPPFIAQSNRQ-------KQQMIMAG---EFSFYEQTWKNISSSAKQLI 279
           GV ++ L   G  P+   S+ Q       +QQ+ +     +    ++ ++ +     Q  
Sbjct: 196 GVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPLSDRWYEVMQFCWLQ-- 253

Query: 280 SSLLTVDPNRRPSAQEL 296
                  P +RPSA+E+
Sbjct: 254 -------PEQRPSAEEV 263

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells. Aatyk1 has been implicated in neural differentiation, and is a regulator of the Na-K-2Cl cotransporter, a membrane protein involved in cell proliferation and survival, epithelial transport, and blood pressure control. The function of Aatyk3 is still unknown. Length = 269

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score = 59.6 bits (144), Expect = 1e-09
 Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 2/100 (2%)

Query: 204 LFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSF 263
           L G+ +Y++PE LL+   T   D WS+GVIL+ +L G PPF+A +  + Q  ++  E + 
Sbjct: 208 LVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTL 267

Query: 264 YEQTWKNISSSAKQLISSLLTVDPNR--RPSAQELLNHPW 301
           +      +S  A  LI+ L      R  R  A ++  HP+
Sbjct: 268 HIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPF 307

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 58.1 bits (140), Expect = 2e-09
 Identities = 45/143 (31%), Positives = 70/143 (48%), Gaps = 18/143 (12%)

Query: 117 VHLILELCSGGELFDRIVAQE-------RYMEVGAAAVIRQIAEGLAALHQANIVHRDLK 169
           +++I E  + G L D + + E       + ++  A     QIAEG+A + Q N +HRDL+
Sbjct: 75  IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSA-----QIAEGMAFIEQRNYIHRDLR 129

Query: 170 PENCLFLNDREDSPLKIMDFGLSSVEGYTDPVV--GLFGSIDYVSPEALLQDRITSKSDM 227
             N L          KI DFGL+ V    +     G    I + +PEA+     T KSD+
Sbjct: 130 AANILV---SASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDV 186

Query: 228 WSLGVILYILLS-GYPPFIAQSN 249
           WS G++L  +++ G  P+   SN
Sbjct: 187 WSFGILLMEIVTYGRIPYPGMSN 209

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|222177 pfam13499, EF_hand_5, EF-hand domain pair

 Score = 53.5 bits (129), Expect = 2e-09
 Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 2/62 (3%)

Query: 443 QMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRA 502
           ++ D D  G I  EE+  +L+AL       ++ E   ++  F+ +D + DG+++F+EF  
Sbjct: 1   KLLDKDGDGYIDVEELRKLLKALGLKLTDEEVEE--LIEADFNEIDKDGDGRISFEEFLE 58

Query: 503 AM 504
           AM
Sbjct: 59  AM 60

Length = 60

>gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

 Score = 58.9 bits (142), Expect = 2e-09
 Identities = 73/281 (25%), Positives = 115/281 (40%), Gaps = 78/281 (27%)

Query: 87  EILVMRKIVENVSPHPNVIDLYDV--------------YEDQNGVHLILELCSGGELFDR 132
           EI ++R++      HPNVI L  V              Y + +  H+I +     +   +
Sbjct: 48  EIALLREL-----KHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHII-KFHRASKANKK 101

Query: 133 IVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLND-REDSPLKIMDFGL 191
            V   R M     +++ QI +G+  LH   ++HRDLKP N L + +  E   +KI D G 
Sbjct: 102 PVQLPRGM---VKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF 158

Query: 192 SSVEGYT-------DPVVGLFGSIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPP 243
           + +           DPVV  F    Y +PE LL  R  +K+ D+W++G I   LL+  P 
Sbjct: 159 ARLFNSPLKPLADLDPVVVTFW---YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPI 215

Query: 244 F------IAQSN-------------------RQKQQMIMAGEFS-----FYEQTWKNIS- 272
           F      I  SN                   +  + +    E S     F   T+ N S 
Sbjct: 216 FHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSL 275

Query: 273 ------------SSAKQLISSLLTVDPNRRPSAQELLNHPW 301
                       S A  L+  LLT+DP +R ++++ +  P+
Sbjct: 276 IKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPY 316

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score = 58.4 bits (141), Expect = 2e-09
 Identities = 50/184 (27%), Positives = 83/184 (45%), Gaps = 29/184 (15%)

Query: 82  ALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL------------ 129
           A L +E+ +M+ I      H N+I+L  V   +  +++I+E  + G L            
Sbjct: 62  ADLISEMELMKLI----GKHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGP 117

Query: 130 ---FDRIVAQERYMEVGA-AAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLK 185
              FD     E  +      +   Q+A G+  L     +HRDL   N L     ED+ +K
Sbjct: 118 DYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLV---TEDNVMK 174

Query: 186 IMDFGLS----SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILLSG 240
           I DFGL+     ++ Y     G    + +++PEAL     T +SD+WS G++++ I   G
Sbjct: 175 IADFGLARGVHDIDYYKKTSNGRL-PVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLG 233

Query: 241 YPPF 244
             P+
Sbjct: 234 GSPY 237

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 58.2 bits (141), Expect = 3e-09
 Identities = 59/255 (23%), Positives = 101/255 (39%), Gaps = 53/255 (20%)

Query: 99  SPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-----ERYMEVGAAAVIRQIAE 153
           SP+  ++  Y  +     + + +E   GG L D+++ +     E  +   + AV+R    
Sbjct: 58  SPY--IVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPENILGKISIAVLR---- 110

Query: 154 GLAALHQA-NIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF-GSIDYV 211
           GL  L +   I+HRD+KP N L +N R +  +K+ DFG+S      D +   F G+  Y+
Sbjct: 111 GLTYLREKHKIMHRDVKPSNIL-VNSRGE--IKLCDFGVSGQ--LIDSMANSFVGTRSYM 165

Query: 212 SPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMI------MAGEFSFYE 265
           SPE L     T +SD+WSLG+ L  +  G  P      ++ + M          + S   
Sbjct: 166 SPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRP 225

Query: 266 QTW----------------------------KNISSSAKQLISSLLTVDPNRRPSAQELL 297
            +                                S   +  +   L  +P  R   +EL 
Sbjct: 226 VSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELT 285

Query: 298 NHPWVIGDSAKEEEM 312
            HP++     +E + 
Sbjct: 286 KHPFIKRAELEEVDF 300

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 58.2 bits (140), Expect = 3e-09
 Identities = 68/259 (26%), Positives = 113/259 (43%), Gaps = 47/259 (18%)

Query: 11  EYEVTDILGRGGFSVVRRGIKKTCGETNQ--VAIKTLRRIGSTTPYGFPGSRGSSSSSQI 68
           E +   +LG G F  V +GI    GET +  VAIK L    +T P               
Sbjct: 8   ELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNE--TTGPK-------------- 51

Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
                      ++    +E L+M  +      HP+++ L  V      + L+ +L   G 
Sbjct: 52  -----------ANVEFMDEALIMASM-----DHPHLVRLLGVCLSPT-IQLVTQLMPHGC 94

Query: 129 LFDRIVAQERYMEVGAAAVIR---QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLK 185
           L D +   E    +G+  ++    QIA+G+  L +  +VHRDL   N L    +  + +K
Sbjct: 95  LLDYV--HEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLV---KSPNHVK 149

Query: 186 IMDFGLSS-VEGYTDPVVGLFGS--IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GY 241
           I DFGL+  +EG         G   I +++ E +   + T +SD+WS GV ++ L++ G 
Sbjct: 150 ITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGG 209

Query: 242 PPFIAQSNRQKQQMIMAGE 260
            P+     R+   ++  GE
Sbjct: 210 KPYDGIPTREIPDLLEKGE 228

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 58.1 bits (140), Expect = 3e-09
 Identities = 53/183 (28%), Positives = 85/183 (46%), Gaps = 31/183 (16%)

Query: 84  LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRI---------- 133
           L +E+ +M+ I      H N+I+L         +++I+E  S G L + +          
Sbjct: 70  LISEMEMMKMI----GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEY 125

Query: 134 ------VAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIM 187
                 V +E+       +   Q+A G+  L     +HRDL   N L     ED+ +KI 
Sbjct: 126 CYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIA 182

Query: 188 DFGLSS----VEGYTDPVVGLFGSIDYVSPEALLQDRI-TSKSDMWSLGVILY-ILLSGY 241
           DFGL+     ++ Y     G    + +++PEAL  DRI T +SD+WS GV+L+ I   G 
Sbjct: 183 DFGLARDIHHIDYYKKTTNGRL-PVKWMAPEALF-DRIYTHQSDVWSFGVLLWEIFTLGG 240

Query: 242 PPF 244
            P+
Sbjct: 241 SPY 243

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 57.8 bits (140), Expect = 3e-09
 Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 30/155 (19%)

Query: 162 NIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSI---------DYVS 212
            I+HRD+KP N L L+   +  +K+ DFG+S   G       L  SI          Y++
Sbjct: 128 KIIHRDVKPSNIL-LDRNGN--IKLCDFGIS---GQ------LVDSIAKTRDAGCRPYMA 175

Query: 213 PEALLQDRITS---KSDMWSLGVILYILLSG---YPPFIAQSNRQKQQMIMAGEFSFYEQ 266
           PE +          +SD+WSLG+ LY + +G   YP +   S   +   ++ G+      
Sbjct: 176 PERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKW--NSVFDQLTQVVKGDPPILSN 233

Query: 267 T-WKNISSSAKQLISSLLTVDPNRRPSAQELLNHP 300
           +  +  S S    I+  L  D ++RP  +ELL HP
Sbjct: 234 SEEREFSPSFVNFINLCLIKDESKRPKYKELLEHP 268

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 57.7 bits (139), Expect = 4e-09
 Identities = 50/182 (27%), Positives = 83/182 (45%), Gaps = 29/182 (15%)

Query: 84  LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL-------------- 129
           L +E+ +M+ I      H N+I+L         +++++E  S G L              
Sbjct: 64  LVSEMEMMKMI----GKHKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDY 119

Query: 130 -FDRI-VAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIM 187
            FD   + +E+       +   Q+A G+  L     +HRDL   N L     ED+ +KI 
Sbjct: 120 SFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLV---TEDNVMKIA 176

Query: 188 DFGLS----SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILLSGYP 242
           DFGL+    +++ Y     G    + +++PEAL     T +SD+WS GV+L+ I   G  
Sbjct: 177 DFGLARDVHNIDYYKKTTNGRL-PVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGS 235

Query: 243 PF 244
           P+
Sbjct: 236 PY 237

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 57.8 bits (139), Expect = 4e-09
 Identities = 46/144 (31%), Positives = 72/144 (50%), Gaps = 8/144 (5%)

Query: 102 PNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQA 161
           P ++  Y  +     + + +E   GG L   +   +R  E     V   +  GLA L + 
Sbjct: 63  PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREK 122

Query: 162 N-IVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF-GSIDYVSPEALLQD 219
           + I+HRD+KP N L +N R +  +K+ DFG+S      D +   F G+  Y+SPE L   
Sbjct: 123 HQIMHRDVKPSNIL-VNSRGE--IKLCDFGVSG--QLIDSMANSFVGTRSYMSPERLQGT 177

Query: 220 RITSKSDMWSLGVILYILLSG-YP 242
             + +SD+WS+G+ L  L  G YP
Sbjct: 178 HYSVQSDIWSMGLSLVELAIGRYP 201

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 58.1 bits (140), Expect = 5e-09
 Identities = 38/101 (37%), Positives = 51/101 (50%), Gaps = 3/101 (2%)

Query: 150 QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSID 209
           Q+   LA +H   I HRDLKP+N L   D     LK+ DFG +         V    S  
Sbjct: 178 QLCRALAYIHSKFICHRDLKPQNLLI--DPNTHTLKLCDFGSAKNLLAGQRSVSYICSRF 235

Query: 210 YVSPEALL-QDRITSKSDMWSLGVILYILLSGYPPFIAQSN 249
           Y +PE +L     T+  D+WSLG I+  ++ GYP F  QS+
Sbjct: 236 YRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSS 276

Length = 440

>gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

 Score = 57.7 bits (139), Expect = 5e-09
 Identities = 48/166 (28%), Positives = 83/166 (50%), Gaps = 16/166 (9%)

Query: 150 QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGS-- 207
           Q+A G+  L     +HRDL   N L     E++ +KI DFGL+  + Y DP     GS  
Sbjct: 182 QVARGMEFLASRKCIHRDLAARNILL---SENNVVKICDFGLAR-DIYKDPDYVRKGSAR 237

Query: 208 --IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIA-QSNRQKQQMIMAGEFSF 263
             + +++PE++     T++SD+WS GV+L+ + S G  P+   Q N +  Q +  G    
Sbjct: 238 LPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGT--- 294

Query: 264 YEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAKE 309
             +  +N +    +++ +    DP  RP+   L+    ++GD  +E
Sbjct: 295 RMRAPENATPEIYRIMLACWQGDPKERPTFSALVE---ILGDLLQE 337

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 56.7 bits (137), Expect = 6e-09
 Identities = 50/167 (29%), Positives = 74/167 (44%), Gaps = 22/167 (13%)

Query: 150 QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV-----EGYTDPVVGL 204
           QI +G+  L     VHRDL   N L  ++   + +KI DFGL+ V     E Y     G 
Sbjct: 116 QICKGMEYLGSKRYVHRDLATRNILVESE---NRVKIGDFGLTKVLPQDKEYYKVREPGE 172

Query: 205 FGSIDYVSPEALLQDRITSKSDMWSLGVILYILL-----SGYPP--FIAQSNRQKQ-QMI 256
              I + +PE+L + + +  SD+WS GV+LY L      S  PP  F+      KQ QMI
Sbjct: 173 -SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMI 231

Query: 257 MAGEFSFYEQTWK-----NISSSAKQLISSLLTVDPNRRPSAQELLN 298
           +       +   +        +    ++      DP++RPS  EL  
Sbjct: 232 VYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELAL 278

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 57.0 bits (137), Expect = 6e-09
 Identities = 48/182 (26%), Positives = 82/182 (45%), Gaps = 29/182 (15%)

Query: 84  LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRI---------- 133
           L +E+ +M+ I      H N+I+L         +++I+E  S G L + +          
Sbjct: 67  LVSEMEMMKMI----GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEY 122

Query: 134 ------VAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIM 187
                 V  E+       +   Q+A G+  L     +HRDL   N L     E++ +KI 
Sbjct: 123 SYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLV---TENNVMKIA 179

Query: 188 DFGLS----SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILLSGYP 242
           DFGL+    +++ Y     G    + +++PEAL     T +SD+WS GV+++ I   G  
Sbjct: 180 DFGLARDVNNIDYYKKTTNGRL-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 238

Query: 243 PF 244
           P+
Sbjct: 239 PY 240

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 56.6 bits (137), Expect = 8e-09
 Identities = 44/169 (26%), Positives = 66/169 (39%), Gaps = 39/169 (23%)

Query: 157 ALH----QANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS--VEGYTDPVVGLFGSIDY 210
           ALH    +  ++HRD+KP N L         +K+ DFG+S   V+          G   Y
Sbjct: 126 ALHYLKEKHGVIHRDVKPSNILL---DASGNVKLCDFGISGRLVDSKAKTRSA--GCAAY 180

Query: 211 VSPEALLQDRITSK----SDMWSLGVILYILLSGYPPF------------IAQSNRQKQQ 254
           ++PE +       K    +D+WSLG+ L  L +G  P+            I Q       
Sbjct: 181 MAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPPS-- 238

Query: 255 MIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVI 303
             +     F        S      +   LT D  +RP  +ELL HP++ 
Sbjct: 239 --LPPNEGF--------SPDFCSFVDLCLTKDHRKRPKYRELLQHPFIR 277

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

 Score = 56.6 bits (136), Expect = 1e-08
 Identities = 72/277 (25%), Positives = 113/277 (40%), Gaps = 70/277 (25%)

Query: 87  EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIV-------AQERY 139
           EI ++R++      HPNVI L  V+   +   + L           I+       A ++ 
Sbjct: 48  EIALLREL-----KHPNVIALQKVFLSHSDRKVWLLFDYAEHDLWHIIKFHRASKANKKP 102

Query: 140 MEVGAAAV---IRQIAEGLAALHQANIVHRDLKPENCLFLND-REDSPLKIMDFGLSSVE 195
           M++  + V   + QI +G+  LH   ++HRDLKP N L + +  E   +KI D G + + 
Sbjct: 103 MQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLF 162

Query: 196 GYT-------DPVVGLFGSIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPF--- 244
                     DPVV  F    Y +PE LL  R  +K+ D+W++G I   LL+  P F   
Sbjct: 163 NSPLKPLADLDPVVVTFW---YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219

Query: 245 ---IAQSN----RQKQQMIMAGEF--------------------SFYEQTWKNIS----- 272
              I  SN     Q  ++     F                     F   T+ N S     
Sbjct: 220 QEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYM 279

Query: 273 --------SSAKQLISSLLTVDPNRRPSAQELLNHPW 301
                   S    L+  LLT+DP +R ++++ L  P+
Sbjct: 280 EKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPY 316

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 56.1 bits (135), Expect = 1e-08
 Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 21/170 (12%)

Query: 86  NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAA 145
           N+ L   KI+  +  +PN+I L  V    + + +I E    G+L   +  +E       A
Sbjct: 62  NDFLKEIKIMSRLK-NPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHA 120

Query: 146 AVI------------RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS 193
             I             QIA G+  L   N VHRDL   NCL  N      +KI DFG+S 
Sbjct: 121 NNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGNHYT---IKIADFGMSR 177

Query: 194 VEGYTDPVVGLFGS----IDYVSPEALLQDRITSKSDMWSLGVILYILLS 239
              Y+     + G     I +++ E++L  + T+ SD+W+ GV L+ + +
Sbjct: 178 -NLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFT 226

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 55.9 bits (135), Expect = 1e-08
 Identities = 52/186 (27%), Positives = 87/186 (46%), Gaps = 32/186 (17%)

Query: 151 IAEGLAALH-QANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGY-TDPVVGLF--G 206
           I + L  LH + +++HRD+KP N L +N   +  +K+ DFG+S   GY  D V      G
Sbjct: 112 IVKALEYLHSKLSVIHRDVKPSNVL-IN--RNGQVKLCDFGIS---GYLVDSVAKTIDAG 165

Query: 207 SIDYVSPEALLQDRITS----KSDMWSLGVILYILLSG-YP------PFIAQSNRQKQQM 255
              Y++PE +  +        KSD+WSLG+ +  L +G +P      PF     +Q +Q+
Sbjct: 166 CKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPF-----QQLKQV 220

Query: 256 IMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAKEEEMD-A 314
           +         + +   S   +  ++  L  +   RP+  ELL HP+   +    +  D A
Sbjct: 221 VEEPSPQLPAEKF---SPEFQDFVNKCLKKNYKERPNYPELLQHPFF--ELHLSKNTDVA 275

Query: 315 EIVSRL 320
             VS +
Sbjct: 276 SFVSLI 281

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score = 56.1 bits (135), Expect = 1e-08
 Identities = 48/169 (28%), Positives = 81/169 (47%), Gaps = 26/169 (15%)

Query: 87  EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAA 146
           EI +M ++ +     PN+I L  V    + + +I E    G+L ++ +++    E    A
Sbjct: 69  EIKIMSRLKD-----PNIIRLLAVCITSDPLCMITEYMENGDL-NQFLSRHEPQEAAEKA 122

Query: 147 VIR------------QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV 194
            +             QIA G+  L   N VHRDL   NCL     ++  +KI DFG+S  
Sbjct: 123 DVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLV---GKNYTIKIADFGMSR- 178

Query: 195 EGYTDPVVGLFGS----IDYVSPEALLQDRITSKSDMWSLGVILYILLS 239
             Y+     + G     I ++S E++L  + T+ SD+W+ GV L+ +L+
Sbjct: 179 NLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILT 227

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

 Score = 55.4 bits (133), Expect = 3e-08
 Identities = 45/162 (27%), Positives = 76/162 (46%), Gaps = 25/162 (15%)

Query: 150 QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGS-- 207
           Q+A+G+  L     +HRDL   N L     E++ +KI DFGL+  + Y DP     G   
Sbjct: 187 QVAKGMEFLASRKCIHRDLAARNILL---SENNVVKICDFGLAR-DIYKDPDYVRKGDAR 242

Query: 208 --IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQS------NRQKQQMIM- 257
             + +++PE +     T +SD+WS GV+L+ + S G  P+           R K+   M 
Sbjct: 243 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 302

Query: 258 AGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH 299
           A +++         +    Q +      +P++RP+  EL+ H
Sbjct: 303 APDYT---------TPEMYQTMLDCWHGEPSQRPTFSELVEH 335

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343

>gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

 Score = 54.3 bits (131), Expect = 4e-08
 Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 24/102 (23%)

Query: 150 QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGS-- 207
           QIA G++ LH+  ++H+D+   NC+     E+  +KI D  LS           LF    
Sbjct: 125 QIACGMSYLHKRGVIHKDIAARNCVI---DEELQVKITDNALSR---------DLFPMDY 172

Query: 208 ----------IDYVSPEALLQDRITSKSDMWSLGVILYILLS 239
                     + +++ E+L+    +S SD+WS GV+L+ L++
Sbjct: 173 HCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMT 214

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280

>gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3

 Score = 54.2 bits (130), Expect = 4e-08
 Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 12/151 (7%)

Query: 151 IAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS----SVEGYTDPVVGLFG 206
           IA G+  L   N +HRDL   NC+     E+  + + DFGLS    S + Y         
Sbjct: 122 IASGMEYLSSKNFIHRDLAARNCML---NENMTVCVADFGLSKKIYSGDYYRQGCASKL- 177

Query: 207 SIDYVSPEALLQDRITSKSDMWSLGVILY-ILLSGYPPFIAQSNRQKQQMIMAGEFSFYE 265
            + +++ E+L  +  T+ SD+W+ GV ++ I+  G  P+    N +    ++ G      
Sbjct: 178 PVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGN---RL 234

Query: 266 QTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
           +   +      +L+    + +P  RPS Q L
Sbjct: 235 KQPPDCLEDVYELMCQCWSPEPKCRPSFQHL 265

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 54.7 bits (131), Expect = 4e-08
 Identities = 44/156 (28%), Positives = 74/156 (47%), Gaps = 7/156 (4%)

Query: 102 PNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQA 161
           P ++  Y  +     + + +E   GG L   +    R  E     V   + +GL  L + 
Sbjct: 63  PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 122

Query: 162 N-IVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF-GSIDYVSPEALLQD 219
           + I+HRD+KP N L +N R +  +K+ DFG+S      D +   F G+  Y+SPE L   
Sbjct: 123 HKIMHRDVKPSNIL-VNSRGE--IKLCDFGVSG--QLIDSMANSFVGTRSYMSPERLQGT 177

Query: 220 RITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQM 255
             + +SD+WS+G+ L  +  G  P      ++ + M
Sbjct: 178 HYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELM 213

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein

 Score = 53.9 bits (130), Expect = 6e-08
 Identities = 59/262 (22%), Positives = 100/262 (38%), Gaps = 54/262 (20%)

Query: 83  LLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRI--VAQERYM 140
           LL  EI+  R++      HPN++     +   + ++++  L + G   D +     E   
Sbjct: 45  LLQQEIITSRQLQ-----HPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLKTHFPEGLP 99

Query: 141 EVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV-----E 195
           E+  A +++ +   L  +H    +HR +K  + L   D      K++  GL         
Sbjct: 100 ELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDG-----KVVLSGLRYSVSMIKH 154

Query: 196 GYTDPVVGLFG-----SIDYVSPEALLQDRI--TSKSDMWSLGVILYILLSGYPPF---- 244
           G    VV  F      ++ ++SPE L Q+      KSD++S+G+    L +G+ PF    
Sbjct: 155 GKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMP 214

Query: 245 ----------------IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAK----------QL 278
                           + +S     +  M+   S  E      S              Q 
Sbjct: 215 ATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQF 274

Query: 279 ISSLLTVDPNRRPSAQELLNHP 300
           +   L  DP  RPSA +LLNH 
Sbjct: 275 VELCLQRDPESRPSASQLLNHS 296

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314

>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional

 Score = 54.5 bits (131), Expect = 9e-08
 Identities = 59/243 (24%), Positives = 105/243 (43%), Gaps = 38/243 (15%)

Query: 75  KQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFD--R 132
           K+++  +++ ++EI  M K+      HPN++ L  +   + G +LI E   G  L +  R
Sbjct: 721 KEINDVNSIPSSEIADMGKL-----QHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLR 775

Query: 133 IVAQERYMEVGAAAVIRQIAEGLAALH---QANIVHRDLKPENCLFLNDREDSPLKIMDF 189
            ++ ER  ++        IA+ L  LH      +V  +L PE  +   D +D P   +  
Sbjct: 776 NLSWERRRKIAIG-----IAKALRFLHCRCSPAVVVGNLSPEKIII--DGKDEPHLRL-- 826

Query: 190 GLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSN 249
              S+ G        F S  YV+PE      IT KSD++  G+IL  LL+G  P  A+  
Sbjct: 827 ---SLPGLLCTDTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFG 883

Query: 250 RQKQQMIMAGEFSFYE---QTW------KNISSSAKQLISSL------LTVDPNRRPSAQ 294
                ++    + + +     W       ++S +  +++  +         DP  RP A 
Sbjct: 884 VH-GSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCAN 942

Query: 295 ELL 297
           ++L
Sbjct: 943 DVL 945

Length = 968

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score = 53.4 bits (128), Expect = 1e-07
 Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 8/97 (8%)

Query: 147 VIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFG 206
           V  QIA G+  L   N VHRDL   NCL     E+  +KI DFG+S    Y      + G
Sbjct: 143 VALQIASGMKYLSSLNFVHRDLATRNCLV---GENLTIKIADFGMSR-NLYAGDYYRIQG 198

Query: 207 S----IDYVSPEALLQDRITSKSDMWSLGVILYILLS 239
                I +++ E +L  + T+ SD+W+ GV L+ +L 
Sbjct: 199 RAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILM 235

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score = 53.3 bits (128), Expect = 1e-07
 Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 9/100 (9%)

Query: 150 QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGS-- 207
           Q+A G+  L     +HRDL   N L     E++ +KI DFGL+  + Y DP     G   
Sbjct: 181 QVARGMEFLASRKCIHRDLAARNILL---SENNVVKICDFGLAR-DIYKDPDYVRKGDAR 236

Query: 208 --IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPF 244
             + +++PE++     T++SD+WS GV+L+ + S G  P+
Sbjct: 237 LPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPY 276

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3

 Score = 52.7 bits (126), Expect = 1e-07
 Identities = 43/154 (27%), Positives = 76/154 (49%), Gaps = 12/154 (7%)

Query: 150 QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFG--- 206
           QIA+G+  L +  +VHR+L   N L    + DS ++I DFG++ +  Y D     +    
Sbjct: 117 QIAKGMYYLEEHRMVHRNLAARNILL---KSDSIVQIADFGVADLL-YPDDKKYFYSEHK 172

Query: 207 -SIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFY 264
             I +++ E++L  R T +SD+WS GV ++ ++S G  P+      +   ++  GE    
Sbjct: 173 TPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKGERLAQ 232

Query: 265 EQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN 298
            Q     +     ++     +D N RP+ +EL N
Sbjct: 233 PQI---CTIDVYMVMVKCWMIDENVRPTFKELAN 263

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 53.7 bits (129), Expect = 2e-07
 Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 3/97 (3%)

Query: 98  VSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAA 157
           +S  P ++ LY   +  N V+L++E   GG++   +     + E  A   I ++A  L  
Sbjct: 60  LSKSPFIVHLYYSLQSANNVYLVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDY 119

Query: 158 LHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV 194
           LH+  I+HRDLKP+N L  N+     +K+ DFGLS V
Sbjct: 120 LHRHGIIHRDLKPDNMLISNEGH---IKLTDFGLSKV 153

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score = 53.1 bits (127), Expect = 2e-07
 Identities = 25/90 (27%), Positives = 52/90 (57%), Gaps = 3/90 (3%)

Query: 104 VIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANI 163
           V+ LY  ++D++ ++ +++   GG++   ++  E + EV A   I ++   + ++H+   
Sbjct: 63  VVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGF 122

Query: 164 VHRDLKPENCLFLNDREDSPLKIMDFGLSS 193
           +HRD+KP+N L      D  +K+ DFGL +
Sbjct: 123 IHRDIKPDNILI---DLDGHIKLTDFGLCT 149

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|133217 cd05086, PTKc_Aatyk2, Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

 Score = 52.2 bits (125), Expect = 2e-07
 Identities = 37/166 (22%), Positives = 74/166 (44%), Gaps = 18/166 (10%)

Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIR----QIAEGLA 156
           HPN++       +     L+ E C  G+L   +  ++ +       +++    +IA G+ 
Sbjct: 54  HPNILQCLGQCVEAIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVT 113

Query: 157 ALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSP 213
            +H+ N +H DL   NC   +D     +K+ D+G+      E Y +        + +++P
Sbjct: 114 HMHKHNFLHSDLALRNCFLTSDLT---VKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAP 170

Query: 214 EAL--LQDRI-----TSKSDMWSLGVILYILL-SGYPPFIAQSNRQ 251
           E +      +     T  S++W+LGV L+ L  +   P+   S+R+
Sbjct: 171 ELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDRE 216

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage spermatogenesis. Although it is classified as a tyr kinase based on sequence similarity and the phylogenetic tree, Aatyk2 has been characterized as a serine/threonine kinase. Length = 268

>gnl|CDD|165476 PHA03210, PHA03210, serine/threonine kinase US3; Provisional

 Score = 52.8 bits (126), Expect = 2e-07
 Identities = 63/269 (23%), Positives = 114/269 (42%), Gaps = 56/269 (20%)

Query: 84  LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLI-----LELCSGGELFDRIVA-QE 137
           L NEIL + ++      H N++ + ++   +   ++I      +L S   ++D     ++
Sbjct: 210 LENEILALGRL-----NHENILKIEEILRSEANTYMITQKYDFDLYS--FMYDEAFDWKD 262

Query: 138 RYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGY 197
           R +     A+++Q+   +  +H   ++HRD+K EN +FLN   D  + + DFG  +   +
Sbjct: 263 RPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLEN-IFLNC--DGKIVLGDFG--TAMPF 317

Query: 198 TDPVV----GLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQK 252
                    G  G++   SPE L  D     +D+WS G+IL  +LS  + P      +  
Sbjct: 318 EKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPG 377

Query: 253 QQM--------IMAGEF-------------SFYEQTWKNISSSAKQL---------ISSL 282
           +Q+        +   EF             +  +    ++    + L         +  +
Sbjct: 378 KQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKM 437

Query: 283 LTVDPNRRPSAQELLNHPWVIGDSAKEEE 311
           LT D + RP A ELL  P     SA+EEE
Sbjct: 438 LTFDWHLRPGAAELLALPLF---SAEEEE 463

Length = 501

>gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

 Score = 52.3 bits (125), Expect = 3e-07
 Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 10/107 (9%)

Query: 150 QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVG---LFG 206
           Q+A G+  L   N VHRDL   N L    +    +KI DFGL+    +    V     F 
Sbjct: 245 QVARGMEFLASKNCVHRDLAARNVLLAQGK---IVKICDFGLARDIMHDSNYVSKGSTFL 301

Query: 207 SIDYVSPEALLQDRITSKSDMWSLGVILYILLS----GYPPFIAQSN 249
            + +++PE++  +  T+ SD+WS G++L+ + S     YP  I  S 
Sbjct: 302 PVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDST 348

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 51.2 bits (122), Expect = 4e-07
 Identities = 45/162 (27%), Positives = 70/162 (43%), Gaps = 34/162 (20%)

Query: 151 IAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV----EGYTDPVVGLFG 206
           IA G+  L   + +HRDL   NC+ LN  E+  + + DFGLS      + Y    +    
Sbjct: 121 IASGMEYLSSKSFIHRDLAARNCM-LN--ENMNVCVADFGLSKKIYNGDYYRQGRIAKM- 176

Query: 207 SIDYVSPEALLQDRITSKSDMWSLGVILY-ILLSGYPP-----------FIAQSNRQKQQ 254
            + +++ E+L     T+KSD+WS GV ++ I   G  P           ++ Q NR KQ 
Sbjct: 177 PVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNRLKQP 236

Query: 255 MIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
                          +       L+SS   ++P  RPS + L
Sbjct: 237 --------------PDCLDGLYSLMSSCWLLNPKDRPSFETL 264

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|222407 pfam13833, EF_hand_6, EF-hand domain pair

 Score = 46.4 bits (111), Expect = 4e-07
 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 6/57 (10%)

Query: 450 SGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR 506
            G IT+EE+   L  L             ++D +F   D + DGK++F+EF   +QR
Sbjct: 2   KGLITREELKRALALLGISL------SEEEVDILFREFDTDGDGKISFEEFCVLLQR 52

Length = 53

>gnl|CDD|215638 PLN03225, PLN03225, Serine/threonine-protein kinase SNT7; Provisional

 Score = 51.7 bits (124), Expect = 5e-07
 Identities = 28/74 (37%), Positives = 37/74 (50%), Gaps = 11/74 (14%)

Query: 147 VIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFG 206
           ++RQI   L  LH   IVHRD+KP+N +F         KI+D G +      D  VG   
Sbjct: 260 IMRQILFALDGLHSTGIVHRDVKPQNIIF--SEGSGSFKIIDLGAA-----ADLRVG--- 309

Query: 207 SIDYVSPEALLQDR 220
            I+Y+  E LL  R
Sbjct: 310 -INYIPKEFLLDPR 322

Length = 566

>gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit

 Score = 51.4 bits (123), Expect = 6e-07
 Identities = 43/155 (27%), Positives = 79/155 (50%), Gaps = 15/155 (9%)

Query: 150 QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS-SVEGYTDPVVGLFGS- 207
           Q+A+G++ L   N +HRDL   N L  + R     KI DFGL+  +   ++ VV   G+ 
Sbjct: 222 QVAKGMSFLASKNCIHRDLAARNILLTHGR---ITKICDFGLARDIRNDSNYVVK--GNA 276

Query: 208 ---IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQK-QQMIMAGEFS 262
              + +++PE++     T +SD+WS G++L+ + S G  P+       K  +MI  G   
Sbjct: 277 RLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEG--- 333

Query: 263 FYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELL 297
           +   + +   S    ++ S    DP +RP+ ++++
Sbjct: 334 YRMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIV 368

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375

>gnl|CDD|238008 cd00051, EFh, EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands

 Score = 46.0 bits (110), Expect = 8e-07
 Identities = 16/60 (26%), Positives = 26/60 (43%)

Query: 404 RIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLR 463
             F LFD + DGT+   E+     SL +   ++ +    +  D D  G I  EE   ++ 
Sbjct: 4   EAFRLFDKDGDGTISADELKAALKSLGEGLSEEEIDEMIREVDKDGDGKIDFEEFLELMA 63

Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers. Length = 63

>gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

 Score = 49.9 bits (119), Expect = 1e-06
 Identities = 66/285 (23%), Positives = 105/285 (36%), Gaps = 51/285 (17%)

Query: 17  ILGRGGFSVVRRGIKKTCGETN-QVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRK 75
           ILG G F  + RG  K   +    VAI TLR              G S   + GF     
Sbjct: 12  ILGTGRFGELCRGCLKLPSKRELPVAIHTLRA-------------GCSDKQRRGFL---- 54

Query: 76  QVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA 135
                      E L + +       H N++ L  V    N + ++ E  S G L   +  
Sbjct: 55  ----------AEALTLGQF-----DHSNIVRLEGVITRGNTMMIVTEYMSNGALDSFLRK 99

Query: 136 QERYMEVGA-AAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV 194
            E  +  G    ++  +A G+  L +   VH+ L     L      D   KI  F     
Sbjct: 100 HEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLV---NSDLVCKISGFR---- 152

Query: 195 EGYTDPVVGLFGSID------YVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQ 247
               D    ++ ++       + +PEA+     +S SD+WS G++++ ++S G  P+   
Sbjct: 153 RLQEDKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDM 212

Query: 248 SNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPS 292
           S    Q +I A E  F     +N  +   QL+      +   RP 
Sbjct: 213 SG---QDVIKAVEDGFRLPAPRNCPNLLHQLMLDCWQKERGERPR 254

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

 Score = 50.4 bits (120), Expect = 1e-06
 Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 20/104 (19%)

Query: 150 QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS---------VEGYTDP 200
           Q+A G+  L   N VHRDL   N L     E   +KI DFGL+           +G T  
Sbjct: 247 QVANGMEFLASKNCVHRDLAARNVLIC---EGKLVKICDFGLARDIMRDSNYISKGST-- 301

Query: 201 VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY--ILLSGYP 242
               F  + +++PE++  +  T+ SD+WS G++L+    L G P
Sbjct: 302 ----FLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTP 341

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401

>gnl|CDD|197492 smart00054, EFh, EF-hand, calcium binding motif

 Score = 44.3 bits (106), Expect = 1e-06
 Identities = 11/28 (39%), Positives = 18/28 (64%)

Query: 479 KLDEIFDLMDANNDGKVTFDEFRAAMQR 506
           +L E F L D + DGK+ F+EF+  ++ 
Sbjct: 1   ELKEAFRLFDKDGDGKIDFEEFKDLLKA 28

EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions. Length = 29

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score = 50.2 bits (120), Expect = 1e-06
 Identities = 32/101 (31%), Positives = 56/101 (55%), Gaps = 11/101 (10%)

Query: 150 QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS-SVEGYTDPVVGLFGS- 207
           Q+A+G+  L   N +HRD+   N L  + R     KI DFGL+  +   ++ VV   G+ 
Sbjct: 220 QVAQGMDFLASKNCIHRDVAARNVLLTDGR---VAKICDFGLARDIMNDSNYVVK--GNA 274

Query: 208 ---IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPF 244
              + +++PE++     T +SD+WS G++L+ + S G  P+
Sbjct: 275 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPY 315

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|200946 pfam00036, efhand, EF hand

 Score = 43.6 bits (104), Expect = 3e-06
 Identities = 10/28 (35%), Positives = 19/28 (67%)

Query: 479 KLDEIFDLMDANNDGKVTFDEFRAAMQR 506
           +L E F   D + DGK++F+EF+  +++
Sbjct: 1   ELKEAFKEFDKDGDGKISFEEFKELLKK 28

The EF-hands can be divided into two classes: signaling proteins and buffering/transport proteins. The first group is the largest and includes the most well-known members of the family such as calmodulin, troponin C and S100B. These proteins typically undergo a calcium-dependent conformational change which opens a target binding site. The latter group is represented by calbindin D9k and do not undergo calcium dependent conformational changes. Length = 29

>gnl|CDD|178763 PLN03224, PLN03224, probable serine/threonine protein kinase; Provisional

 Score = 48.9 bits (116), Expect = 5e-06
 Identities = 32/79 (40%), Positives = 43/79 (54%), Gaps = 15/79 (18%)

Query: 146 AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVG-- 203
            V+RQ+  GL  LH+  IVHRD+KPEN L   D +   +KI+DFG +      D   G  
Sbjct: 313 GVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQ---VKIIDFGAA-----VDMCTGIN 364

Query: 204 ---LFGSID--YVSPEALL 217
              L+G +D  Y  PE L+
Sbjct: 365 FNPLYGMLDPRYSPPEELV 383

Length = 507

>gnl|CDD|240159 cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

 Score = 45.5 bits (108), Expect = 8e-06
 Identities = 32/137 (23%), Positives = 54/137 (39%), Gaps = 19/137 (13%)

Query: 81  DALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYM 140
            A    E+ +++ +     P P V       E     +L++E   G  L +    ++   
Sbjct: 35  GADREREVAILQLLARKGLPVPKV---LASGESDGWSYLLMEWIEGETLDEVSEEEK--- 88

Query: 141 EVGAAAVIRQIAEGLAALHQANI---VHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGY 197
                 +  Q+AE LA LHQ  +    H DL P N L  + +    L I+D+  +   GY
Sbjct: 89  ----EDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKI---LGIIDWEYA---GY 138

Query: 198 TDPVVGLFGSIDYVSPE 214
             P   L  ++ +   E
Sbjct: 139 GPPAFDLAAALLFNLLE 155

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves as precursors to the synthesis of important biological compounds, such as the major phospholipids, phosphatidylcholine and phosphatidylethanolamine and the amino acids, threonine, methionine, and isoleucine. Length = 155

>gnl|CDD|222177 pfam13499, EF_hand_5, EF-hand domain pair

 Score = 42.7 bits (101), Expect = 1e-05
 Identities = 15/60 (25%), Positives = 24/60 (40%), Gaps = 4/60 (6%)

Query: 407 DLFDNNRDGTVDMREILCGFSSLRKSQGDDA----LRLCFQMYDIDRSGCITKEEVASML 462
            L D + DG +D+ E+     +L     D+     +   F   D D  G I+ EE    +
Sbjct: 1   KLLDKDGDGYIDVEELRKLLKALGLKLTDEEVEELIEADFNEIDKDGDGRISFEEFLEAM 60

Length = 60

>gnl|CDD|238009 cd00052, EH, Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction

 Score = 43.0 bits (102), Expect = 1e-05
 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 8/64 (12%)

Query: 441 CFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEF 500
            F+  D D  G I+ +E    L       LP  +     L +I+DL D + DGK+  +EF
Sbjct: 4   IFRSLDPDGDGLISGDEARPFLGKSG---LPRSV-----LAQIWDLADTDKDGKLDKEEF 55

Query: 501 RAAM 504
             AM
Sbjct: 56  AIAM 59

The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs. Length = 67

>gnl|CDD|238008 cd00051, EFh, EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands

 Score = 40.6 bits (96), Expect = 6e-05
 Identities = 11/27 (40%), Positives = 18/27 (66%)

Query: 479 KLDEIFDLMDANNDGKVTFDEFRAAMQ 505
           +L E F L D + DG ++ DE +AA++
Sbjct: 1   ELREAFRLFDKDGDGTISADELKAALK 27

Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers. Length = 63

>gnl|CDD|165291 PHA02988, PHA02988, hypothetical protein; Provisional

 Score = 44.3 bits (105), Expect = 7e-05
 Identities = 53/223 (23%), Positives = 98/223 (43%), Gaps = 27/223 (12%)

Query: 86  NEILVMRKIVENVSPHPNVIDLY----DVYEDQNGVHLILELCSGGELFDRIVAQERYME 141
           NEI  +R+I  N     N++ +Y    D+ +D   + LILE C+ G L + +  ++    
Sbjct: 67  NEIKNLRRIDSN-----NILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDKEKDLSF 121

Query: 142 VGAAAVIRQIAEGLAALHQ-ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP 200
                +     +GL  L++  N  +++L   +  FL   E+  LKI+  GL  +   + P
Sbjct: 122 KTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVS--FLVT-ENYKLKIICHGLEKI--LSSP 176

Query: 201 VVGLFGSIDYVSPEALLQ--DRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMA 258
                  + Y S + L       T K D++SLGV+L+ + +G  PF   + ++   +I+ 
Sbjct: 177 PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIIN 236

Query: 259 GEFSFYEQTWKNISSSAKQLISSLLTV----DPNRRPSAQELL 297
              S        +       I  ++      D  +RP+ +E+L
Sbjct: 237 KNNSLK------LPLDCPLEIKCIVEACTSHDSIKRPNIKEIL 273

Length = 283

>gnl|CDD|234331 TIGR03724, arch_bud32, Kae1-associated kinase Bud32

 Score = 43.0 bits (102), Expect = 1e-04
 Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 13/90 (14%)

Query: 103 NVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQAN 162
           N   +YDV  D +   +++E   G  L D        +E G   ++R+I   +  LH+A 
Sbjct: 60  NTPVVYDV--DPDNKTIVMEYIEGKPLKD-------VIEEGNDELLREIGRLVGKLHKAG 110

Query: 163 IVHRDLKPENCLFLNDREDSPLKIMDFGLS 192
           IVH DL   N +  +D+    L ++DFGL 
Sbjct: 111 IVHGDLTTSNIIVRDDK----LYLIDFGLG 136

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine [Unknown function, General]. Length = 199

>gnl|CDD|133207 cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 43.4 bits (102), Expect = 1e-04
 Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 28/164 (17%)

Query: 147 VIRQIAEGLAALHQANIVHRDLKPENCLF----LNDREDSPLKIMDFGLS----SVEGYT 198
           V +Q+A  L+ L   N+VH ++  +N L     L +     +K+ D G+S    S E   
Sbjct: 122 VAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSREERV 181

Query: 199 DPVVGLFGSIDYVSPEALLQ-DRITSKSDMWSLG-VILYILLSGYPPFIAQSNRQKQQMI 256
           +        I +++PE +   + +++ +D WS G  +L I   G  P   ++  +K++  
Sbjct: 182 E-------RIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKER-- 232

Query: 257 MAGEFSFYEQTWKNISSSAKQ---LISSLLTVDPNRRPSAQELL 297
                 FYE+  +    S K+   LIS  LT +P +RPS + +L
Sbjct: 233 ------FYEKKHRLPEPSCKELATLISQCLTYEPTQRPSFRTIL 270

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 274

>gnl|CDD|205383 pfam13202, EF_hand_3, EF hand

 Score = 38.4 bits (91), Expect = 1e-04
 Identities = 8/25 (32%), Positives = 15/25 (60%)

Query: 480 LDEIFDLMDANNDGKVTFDEFRAAM 504
           L ++F   D N DGK++ +E +  +
Sbjct: 1   LKDLFRQFDTNGDGKISKEELKRLL 25

Length = 25

>gnl|CDD|238008 cd00051, EFh, EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands

 Score = 38.7 bits (91), Expect = 3e-04
 Identities = 13/58 (22%), Positives = 22/58 (37%), Gaps = 1/58 (1%)

Query: 371 FRTICANGDNA-TLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFS 427
           FR    +GD   +  E +  LK++           +    D + DG +D  E L   +
Sbjct: 6   FRLFDKDGDGTISADELKAALKSLGEGLSEEEIDEMIREVDKDGDGKIDFEEFLELMA 63

Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers. Length = 63

>gnl|CDD|205583 pfam13405, EF_hand_4, EF-hand domain

 Score = 37.6 bits (88), Expect = 3e-04
 Identities = 10/27 (37%), Positives = 17/27 (62%)

Query: 479 KLDEIFDLMDANNDGKVTFDEFRAAMQ 505
           +L E F L D + DG ++ +E R A++
Sbjct: 1   ELREAFKLFDKDGDGYISAEELRKALR 27

Length = 30

>gnl|CDD|173643 cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 41.5 bits (97), Expect = 5e-04
 Identities = 38/159 (23%), Positives = 73/159 (45%), Gaps = 30/159 (18%)

Query: 147 VIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSP----LKIMDFGLSSVEGYTDPVV 202
           V +Q+A  L+ L   ++VH ++  +N L   +  D      +K+ D G+        P+ 
Sbjct: 110 VAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGI--------PIT 161

Query: 203 GL-----FGSIDYVSPEALLQDR-ITSKSDMWSLGVILY-ILLSGYPPFIAQSNRQKQQM 255
            L        I +++PE +   + ++  +D WS G  L+ I  +G  P   ++  +K++ 
Sbjct: 162 VLSRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKER- 220

Query: 256 IMAGEFSFYEQTWKNISSSAKQ---LISSLLTVDPNRRP 291
                  FYE     ++ S K+   L++  +  DPN+RP
Sbjct: 221 -------FYEGQCMLVTPSCKELADLMTHCMNYDPNQRP 252

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 262

>gnl|CDD|185503 PTZ00183, PTZ00183, centrin; Provisional

 Score = 40.1 bits (94), Expect = 6e-04
 Identities = 32/155 (20%), Positives = 67/155 (43%), Gaps = 12/155 (7%)

Query: 358 DLNEEEIQNLRIHFRTICANGDNAT-LSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGT 416
            L E++ + +R  F     +G       E +  ++++          ++    D +  G 
Sbjct: 10  GLTEDQKKEIREAFDLFDTDGSGTIDPKELKVAMRSLGFEPKKEEIKQMIADVDKDGSGK 69

Query: 417 VDMREILCGFSS-LRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDC--LPVD 473
           +D  E L   +  L +    + +   F+++D D++G I+       L+ L      L   
Sbjct: 70  IDFEEFLDIMTKKLGERDPREEILKAFRLFDDDKTGKIS-------LKNLKRVAKELGET 122

Query: 474 ITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDS 508
           IT+  +L E+ D  D N DG+++ +EF   M++ +
Sbjct: 123 ITDE-ELQEMIDEADRNGDGEISEEEFYRIMKKTN 156

Length = 158

>gnl|CDD|140307 PTZ00284, PTZ00284, protein kinase; Provisional

 Score = 41.9 bits (98), Expect = 8e-04
 Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 16/110 (14%)

Query: 145 AAVIRQIAEGLAALH-QANIVHRDLKPENCLF---------LNDREDSP----LKIMDFG 190
           A +I Q    L   H + +++H DLKPEN L          + +R   P    ++I D G
Sbjct: 234 AQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLG 293

Query: 191 LSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSG 240
               E ++     +  +  Y SPE +L       +DMWS+G I+Y L +G
Sbjct: 294 GCCDERHSR--TAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTG 341

Length = 467

>gnl|CDD|183426 PRK12309, PRK12309, transaldolase/EF-hand domain-containing protein; Provisional

 Score = 41.6 bits (98), Expect = 8e-04
 Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 19/61 (31%)

Query: 442 FQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFR 501
           F++YD+D  G IT+EE                       D +FD +D N+DGK+T +E R
Sbjct: 340 FRLYDLDGDGFITREEWLGS-------------------DAVFDALDLNHDGKITPEEMR 380

Query: 502 A 502
           A
Sbjct: 381 A 381

Length = 391

>gnl|CDD|226168 COG3642, COG3642, Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

 Score = 40.0 bits (94), Expect = 0.001
 Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 13/92 (14%)

Query: 103 NVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQAN 162
            V  +YDV  D NG+ +++E   G  L D        +E     ++R++   +  LH+A 
Sbjct: 62  PVPIVYDVDPD-NGL-IVMEYIEGELLKD-------ALEEARPDLLREVGRLVGKLHKAG 112

Query: 163 IVHRDLKPENCLFLNDREDSPLKIMDFGLSSV 194
           IVH DL   N +    R    +  +DFGL   
Sbjct: 113 IVHGDLTTSNIILSGGR----IYFIDFGLGEF 140

Length = 204

>gnl|CDD|173766 cd08226, PK_STRAD_beta, Pseudokinase domain of STE20-related kinase adapter protein beta

 Score = 40.7 bits (95), Expect = 0.001
 Identities = 74/325 (22%), Positives = 116/325 (35%), Gaps = 93/325 (28%)

Query: 72  PTRKQVSVSDALLTNEILVMRKIVEN---VSP---HPNVIDLYDVYEDQNGVHLILELCS 125
           PT   V+V    L N      K ++N   +S    HPN++  + V+   + + +I    +
Sbjct: 23  PTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMA 82

Query: 126 GGELFDRIVAQERYMEVGAAAVIRQI----AEGLAALHQANIVHRDLKPENCLFLNDRED 181
            G      + +  + E  + A+I  I      GL  LHQ   +HR++K  + L   D   
Sbjct: 83  YGSA--NSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGD--- 137

Query: 182 SPLKIMDFGLSSVEGYTD-----------PVVGLFGSID-----YVSPEALLQDR--ITS 223
                   GL S+ G +             VV  F         ++SPE L QD      
Sbjct: 138 --------GLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNV 189

Query: 224 KSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIM------------AGEFSFYEQTWKN- 270
           KSD++S+G+    L +G  PF    +  + QM++               F   E   KN 
Sbjct: 190 KSDIYSVGITACELATGRVPF---QDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNS 246

Query: 271 ---------------------------------ISSSAKQLISSLLTVDPNRRPSAQELL 297
                                             S + + L+   L  DP +RPSA  LL
Sbjct: 247 QSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLL 306

Query: 298 NHPWVIGDSAKEEEMDAEIVSRLQS 322
           +H        KE+   + I+S L  
Sbjct: 307 SH--AFFKQVKEQTQGS-ILSLLPP 328

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. STRAD-beta is also referred to as ALS2CR2 (Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 2 protein), since the human gene encoding it is located within the juvenile ALS2 critical region on chromosome 2q33-q34. It is not linked to the development of ALS2. Length = 328

>gnl|CDD|238131 cd00213, S-100, S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif

 Score = 37.5 bits (88), Expect = 0.001
 Identities = 12/25 (48%), Positives = 16/25 (64%)

Query: 476 EPGKLDEIFDLMDANNDGKVTFDEF 500
           +P  +D+I   +D N DGKV F EF
Sbjct: 49  DPEAVDKIMKDLDVNKDGKVDFQEF 73

Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents the interaction site of S100 proteins with their target proteins. There is experimental evidence showing that many S100 proteins have multiple binding partners with diverse mode of interaction with different targets. In addition to S100 proteins (such as S100A1,-3,-4,-6,-7,-10,-11,and -13), this group includes the ''fused'' gene family, a group of calcium binding S100-related proteins. The ''fused'' gene family includes multifunctional epidermal differentiation proteins - profilaggrin, trichohyalin, repetin, hornerin, and cornulin; functionally these proteins are associated with keratin intermediate filaments and partially crosslinked to the cell envelope. These ''fused'' gene proteins contain N-terminal sequence with two Ca-binding EF-hands motif, which may be associated with calcium signaling in epidermal cells and autoprocessing in a calcium-dependent manner. In contrast to S100 proteins, "fused" gene family proteins contain an extraordinary high number of almost perfect peptide repeats with regular array of polar and charged residues similar to many known cell envelope proteins. Length = 88

>gnl|CDD|205583 pfam13405, EF_hand_4, EF-hand domain

 Score = 35.3 bits (82), Expect = 0.002
 Identities = 12/28 (42%), Positives = 18/28 (64%)

Query: 438 LRLCFQMYDIDRSGCITKEEVASMLRAL 465
           LR  F+++D D  G I+ EE+   LR+L
Sbjct: 2   LREAFKLFDKDGDGYISAEELRKALRSL 29

Length = 30

>gnl|CDD|173767 cd08227, PK_STRAD_alpha, Pseudokinase domain of STE20-related kinase adapter protein alpha

 Score = 39.9 bits (93), Expect = 0.002
 Identities = 67/292 (22%), Positives = 107/292 (36%), Gaps = 67/292 (22%)

Query: 72  PTRKQVSVSDALL---TNEILVMRKIVENVSP---HPNVIDLYDVYEDQNGVHLILELCS 125
           PT + V+V    L   TNE++   +   +VS    HPN++     +   N + ++    +
Sbjct: 23  PTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA 82

Query: 126 GGELFDRIVAQ--ERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSP 183
            G   D I     +   E+  A +++ + + L  +H    VHR +K  + L   D     
Sbjct: 83  YGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDG---- 138

Query: 184 LKIMDFGLSSV-----EGYTDPVVGLFGS-----IDYVSPEALLQDR--ITSKSDMWSLG 231
            K+   GL S       G    VV  F       + ++SPE L Q+     +KSD++S+G
Sbjct: 139 -KVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVG 197

Query: 232 VILYILLSGYPPFIAQSNRQKQQMIMAGEFSFY---------EQTWKNISSSAKQLISSL 282
           +    L +G+ PF      Q     + G              E T K   S A   +   
Sbjct: 198 ITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGES 257

Query: 283 LTV---------------------------------DPNRRPSAQELLNHPW 301
            TV                                 +P+ RPSA  LLNH +
Sbjct: 258 TTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSF 309

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha, stabilized through ATP and MO25, may be needed to activate LKB1. A mutation which results in a truncation of a C-terminal part of the human STRAD-alpha pseudokinase domain and disrupts its association with LKB1, leads to PMSE (polyhydramnios, megalencephaly, symptomatic epilepsy) syndrome. Several splice variants of STRAD-alpha exist which exhibit different effects on the localization and activation of LKB1. Length = 327

>gnl|CDD|236586 PRK09605, PRK09605, bifunctional UGMP family protein/serine/threonine protein kinase; Validated

 Score = 39.9 bits (94), Expect = 0.003
 Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 18/106 (16%)

Query: 107 LYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHR 166
           +YDV  D     +++E   G +L D +             ++R++ E +A LH+A IVH 
Sbjct: 403 IYDV--DPEEKTIVMEYIGGKDLKDVLEGNPE--------LVRKVGEIVAKLHKAGIVHG 452

Query: 167 DLKPENCLFLNDREDSPLKIMDFGL----SSVEGYTDPVVGLFGSI 208
           DL   N +  +DR    L ++DFGL      +E     +  L  S+
Sbjct: 453 DLTTSNFIVRDDR----LYLIDFGLGKYSDLIEDKAVDLHVLKQSL 494

Length = 535

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	521
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0575	592	consensus Polo-like serine/threonine protein kinas	100.0
KOG0595	429	consensus Serine/threonine-protein kinase involved	100.0
KOG0598	357	consensus Ribosomal protein S6 kinase and related	100.0
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	100.0
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	100.0
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	100.0
KOG0583	370	consensus Serine/threonine protein kinase [Signal	100.0
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	100.0
KOG0605	550	consensus NDR and related serine/threonine kinases	100.0
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	100.0
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	100.0
KOG0611	668	consensus Predicted serine/threonine protein kinas	100.0
KOG0661	538	consensus MAPK related serine/threonine protein ki	100.0
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	100.0
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	100.0
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	100.0
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0578	550	consensus p21-activated serine/threonine protein k	100.0
KOG0607	463	consensus MAP kinase-interacting kinase and relate	100.0
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	100.0
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	100.0
KOG0694	694	consensus Serine/threonine protein kinase [Signal	100.0
KOG0198	313	consensus MEKK and related serine/threonine protei	100.0
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	100.0
KOG4717	864	consensus Serine/threonine protein kinase [Signal	100.0
KOG0582	516	consensus Ste20-like serine/threonine protein kina	100.0
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	100.0
KOG0201	467	consensus Serine/threonine protein kinase [Signal	100.0
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	100.0
PTZ00263	329	protein kinase A catalytic subunit; Provisional	100.0
KOG0610	459	consensus Putative serine/threonine protein kinase	100.0
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	100.0
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	100.0
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	100.0
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	100.0
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	100.0
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	100.0
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	100.0
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	100.0
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	100.0
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	100.0
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	100.0
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	100.0
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	100.0
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	100.0
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	100.0
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	100.0
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	100.0
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	100.0
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	100.0
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	100.0
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	100.0
KOG0589	426	consensus Serine/threonine protein kinase [General	100.0
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	100.0
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	100.0
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	100.0
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	100.0
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	100.0
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	100.0
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	100.0
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	100.0
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	100.0
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	100.0
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	100.0
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	100.0
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	100.0
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	100.0
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	100.0
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	100.0
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	100.0
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	100.0
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	100.0
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	100.0
KOG0690	516	consensus Serine/threonine protein kinase [Signal	100.0
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	100.0
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	100.0
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	100.0
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	100.0
KOG0586	596	consensus Serine/threonine protein kinase [General	100.0
KOG0192	362	consensus Tyrosine kinase specific for activated (	100.0
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	100.0
PTZ00036	440	glycogen synthase kinase; Provisional	100.0
PHA03212	391	serine/threonine kinase US3; Provisional	100.0
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	100.0
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	100.0
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	100.0
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	100.0
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	100.0
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	100.0
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	100.0
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	100.0
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	100.0
PTZ00284	467	protein kinase; Provisional	100.0
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	100.0
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	100.0
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	100.0
PTZ00283	496	serine/threonine protein kinase; Provisional	100.0
PTZ00267	478	NIMA-related protein kinase; Provisional	100.0
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	100.0
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	100.0
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	100.0
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	100.0
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	100.0
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	100.0
PLN00034	353	mitogen-activated protein kinase kinase; Provision	100.0
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	100.0
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	100.0
PTZ00266	1021	NIMA-related protein kinase; Provisional	100.0
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	100.0
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	100.0
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	100.0
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	100.0
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	100.0
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	100.0
PHA03207	392	serine/threonine kinase US3; Provisional	100.0
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	100.0
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	100.0
KOG0577	948	consensus Serine/threonine protein kinase [Signal	100.0
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	100.0
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	100.0
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	100.0
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	100.0
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	100.0
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	100.0
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	100.0
PHA03209	357	serine/threonine kinase US3; Provisional	100.0
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	100.0
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	100.0
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	100.0
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	100.0
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	100.0
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	100.0
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	100.0
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	100.0
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	100.0
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	100.0
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	100.0
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	100.0
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	100.0
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	100.0
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	100.0
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	100.0
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	100.0
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	100.0
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	100.0
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	100.0
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	100.0
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	100.0
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	100.0
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	100.0
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	100.0
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	100.0
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	100.0
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	100.0
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	100.0
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	100.0
PHA03211	461	serine/threonine kinase US3; Provisional	100.0
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	100.0
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	100.0
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	100.0
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	100.0
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	100.0
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	100.0
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	100.0
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	100.0
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	100.0
KOG0696	683	consensus Serine/threonine protein kinase [Signal	100.0
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	100.0
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	100.0
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	100.0
PHA02988	283	hypothetical protein; Provisional	100.0
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	100.0
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	100.0
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	100.0
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	100.0
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	100.0
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	100.0
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	100.0
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	100.0
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	100.0
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	100.0
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	100.0
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	100.0
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	100.0
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	100.0
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	100.0
KOG4721	904	consensus Serine/threonine protein kinase, contain	100.0
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	100.0
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	100.0
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	100.0
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	100.0
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	100.0
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	100.0
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	100.0
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	100.0
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	100.0
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	100.0
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	100.0
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	100.0
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	100.0
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	100.0
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	100.0
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	100.0
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	100.0
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	100.0
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	100.0
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	100.0
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	100.0
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	100.0
KOG0596	677	consensus Dual specificity; serine/threonine and t	100.0
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	100.0
PLN00009	294	cyclin-dependent kinase A; Provisional	100.0
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	100.0
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	100.0
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	100.0
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	100.0
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	100.0
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	100.0
KOG1989	738	consensus ARK protein kinase family [Signal transd	100.0
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	100.0
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	100.0
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	100.0
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	100.0
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	100.0
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	100.0
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	100.0
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	100.0
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	100.0
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	100.0
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	100.0
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	100.0
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	100.0
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	100.0
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	100.0
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	100.0
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	100.0
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	100.0
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	100.0
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	100.0
PTZ00024	335	cyclin-dependent protein kinase; Provisional	100.0
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	100.0
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	100.0
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	100.0
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	100.0
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	100.0
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	100.0
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	100.0
PHA03210	501	serine/threonine kinase US3; Provisional	100.0
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	100.0
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	100.0
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	100.0
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	100.0
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	100.0
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	100.0
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	100.0
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	100.0
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	100.0
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	100.0
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	100.0
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	100.0
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	100.0
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	100.0
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	100.0
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	100.0
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	100.0
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	100.0
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	100.0
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	100.0
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	100.0
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	100.0
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	100.0
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	100.0
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	100.0
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	100.0
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	100.0
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	100.0
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	100.0
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	100.0
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	100.0
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	100.0
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	100.0
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	100.0
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	100.0
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	100.0
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	100.0
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	100.0
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	100.0
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	100.0
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	100.0
KOG0584	632	consensus Serine/threonine protein kinase [General	100.0
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	100.0
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	100.0
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	100.0
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	100.0
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	100.0
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	100.0
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	100.0
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	100.0
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	100.0
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	100.0
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	100.0
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	100.0
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	100.0
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	100.0
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	100.0
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	100.0
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	100.0
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	100.0
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	100.0
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	100.0
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	100.0
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	100.0
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	100.0
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	100.0
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	100.0
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	100.0
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	100.0
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	100.0
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	100.0
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	100.0
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	100.0
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	100.0
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	100.0
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	100.0
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	100.0
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	100.0
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	100.0
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	100.0
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	100.0
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	100.0
KOG0695	593	consensus Serine/threonine protein kinase [Signal	100.0
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	100.0
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	100.0
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	100.0
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	100.0
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	100.0
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	100.0
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	100.0
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	100.0
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	100.0
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	100.0
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	100.0
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	100.0
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	100.0
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	100.0
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	100.0
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	100.0
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	100.0
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	100.0
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	100.0
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	100.0
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	100.0
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	100.0
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	100.0
PHA02882	294	putative serine/threonine kinase; Provisional	100.0
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	100.0
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	100.0
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	100.0
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	100.0
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	100.0
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	100.0
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	100.0
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	100.0
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	100.0
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	100.0
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	100.0
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	100.0
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	100.0
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	100.0
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	100.0
KOG1187	361	consensus Serine/threonine protein kinase [Signal	100.0
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	100.0
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	100.0
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	100.0
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	100.0
KOG1290	590	consensus Serine/threonine protein kinase [Signal	100.0
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	100.0
PLN03224	507	probable serine/threonine protein kinase; Provisio	100.0
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	100.0
KOG1027	903	consensus Serine/threonine protein kinase and endo	100.0
KOG0576	829	consensus Mitogen-activated protein kinase kinase	100.0
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	100.0
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	100.0
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	100.0
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	100.0
KOG1152	772	consensus Signal transduction serine/threonine kin	100.0
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	100.0
KOG1167	418	consensus Serine/threonine protein kinase of the C	100.0
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	100.0
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	100.0
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	100.0
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.98
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.97
KOG3653	534	consensus Transforming growth factor beta/activin	99.97
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.97
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.97
PLN00181	793	protein SPA1-RELATED; Provisional	99.97
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.96
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.96
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.95
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.95
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.95
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.95
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.94
PRK09188	365	serine/threonine protein kinase; Provisional	99.93
COG5126	160	FRQ1 Ca2+-binding protein (EF-Hand superfamily) [S	99.93
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.93
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.92
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.92
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.91
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.9
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.9
KOG0027	151	consensus Calmodulin and related proteins (EF-Hand	99.9
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.88
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.88
PRK12274	218	serine/threonine protein kinase; Provisional	99.88
PRK10345	210	hypothetical protein; Provisional	99.86
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.85
KOG0028	172	consensus Ca2+-binding protein (centrin/caltractin	99.83
PTZ00183	158	centrin; Provisional	99.83
smart00090	237	RIO RIO-like kinase.	99.83
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.82
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.82
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.81
PRK14879	211	serine/threonine protein kinase; Provisional	99.81
KOG0044	193	consensus Ca2+ sensor (EF-Hand superfamily) [Signa	99.81
PTZ00184	149	calmodulin; Provisional	99.8
KOG0031	171	consensus Myosin regulatory light chain, EF-Hand p	99.78
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.78
KOG0034	187	consensus Ca2+/calmodulin-dependent protein phosph	99.78
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.75
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.74
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.73
KOG0030	152	consensus Myosin essential light chain, EF-Hand pr	99.72
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.7
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.66
KOG0027	151	consensus Calmodulin and related proteins (EF-Hand	99.65
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.64
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.63
KOG0028	172	consensus Ca2+-binding protein (centrin/caltractin	99.62
COG5126	160	FRQ1 Ca2+-binding protein (EF-Hand superfamily) [S	99.62
KOG0036	463	consensus Predicted mitochondrial carrier protein	99.62
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.61
KOG0037	221	consensus Ca2+-binding protein, EF-Hand protein su	99.6
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	99.55
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	99.54
KOG1266	458	consensus Protein kinase [Signal transduction mech	99.52
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	99.5
KOG1243	690	consensus Protein kinase [General function predict	99.48
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.46
PTZ00183	158	centrin; Provisional	99.42
KOG0038	189	consensus Ca2+-binding kinase interacting protein	99.41
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.4
KOG0030	152	consensus Myosin essential light chain, EF-Hand pr	99.39
PTZ00184	149	calmodulin; Provisional	99.38
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	99.36
KOG0037	221	consensus Ca2+-binding protein, EF-Hand protein su	99.35
PLN02964	644	phosphatidylserine decarboxylase	99.35
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	99.29
KOG3087	229	consensus Serine/threonine protein kinase [General	99.28
KOG4223	325	consensus Reticulocalbin, calumenin, DNA supercoil	99.27
KOG4223	325	consensus Reticulocalbin, calumenin, DNA supercoil	99.25
PLN02964	644	phosphatidylserine decarboxylase	99.19
PF13499	66	EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A	99.18
cd05022	89	S-100A13 S-100A13: S-100A13 domain found in protei	99.14
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	99.14
KOG0031	171	consensus Myosin regulatory light chain, EF-Hand p	99.11
KOG2137	700	consensus Protein kinase [Signal transduction mech	99.09
KOG0044	193	consensus Ca2+ sensor (EF-Hand superfamily) [Signa	99.06
COG4248	637	Uncharacterized protein with protein kinase and he	99.03
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	99.02
cd05022	89	S-100A13 S-100A13: S-100A13 domain found in protei	99.01
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	99.01
cd05027	88	S-100B S-100B: S-100B domain found in proteins sim	99.0
PF13499	66	EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A	98.97
COG0478	304	RIO-like serine/threonine protein kinase fused to	98.95
cd05026	93	S-100Z S-100Z: S-100Z domain found in proteins sim	98.91
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.9
PRK09902	216	hypothetical protein; Provisional	98.87
KOG0036	463	consensus Predicted mitochondrial carrier protein	98.86
cd05031	94	S-100A10_like S-100A10_like: S-100A10 domain found	98.85
cd05027	88	S-100B S-100B: S-100B domain found in proteins sim	98.84
cd05029	88	S-100A6 S-100A6: S-100A6 domain found in proteins	98.83
KOG0377	631	consensus Protein serine/threonine phosphatase RDG	98.83
smart00027	96	EH Eps15 homology domain. Pair of EF hand motifs t	98.82
cd05025	92	S-100A1 S-100A1: S-100A1 domain found in proteins	98.8
KOG0576	829	consensus Mitogen-activated protein kinase kinase	98.79
smart00027	96	EH Eps15 homology domain. Pair of EF hand motifs t	98.75
cd05029	88	S-100A6 S-100A6: S-100A6 domain found in proteins	98.75
cd00052	67	EH Eps15 homology domain; found in proteins implic	98.75
cd05026	93	S-100Z S-100Z: S-100Z domain found in proteins sim	98.74
cd05023	89	S-100A11 S-100A11: S-100A11 domain found in protei	98.74
cd05031	94	S-100A10_like S-100A10_like: S-100A10 domain found	98.73
cd00252	116	SPARC_EC SPARC_EC; extracellular Ca2+ binding doma	98.7

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=6.1e-65  Score=473.59  Aligned_cols=273  Identities=38%  Similarity=0.671  Sum_probs=247.2

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      ..+.+.|.+.+.||+|+||.|.+|..+.  +++.||||++++.......                    . .......+.
T Consensus       168 ks~~d~yii~~~LGsGafg~Vkla~e~~--tgk~vAiKIi~krk~~~~s--------------------~-~~~~~~~v~  224 (475)
T KOG0615|consen  168 KSFNDYYIISKTLGSGAFGLVKLAYEKK--TGKQVAIKIINKRKSTGCS--------------------R-AIAKTRDVQ  224 (475)
T ss_pred             chhcceeEeeeeecCCceeEEEEEEEcc--cCcEEEeeeeehhhccccc--------------------c-cccchhhhH
Confidence            4478899999999999999999999998  8999999999987654310                    0 001112267


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      +|+++|++|     +|||||+++++|+.++..||||||++||+|++.+..++.+.|...+.+++||+.|+.|||++||+|
T Consensus       225 ~EieILkkL-----~HP~IV~~~d~f~~~ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~H  299 (475)
T KOG0615|consen  225 NEIEILKKL-----SHPNIVRIKDFFEVPDSSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIH  299 (475)
T ss_pred             HHHHHHHhc-----CCCCEEEEeeeeecCCceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCccc
Confidence            999999999     999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCC---CchhhhHHHHHHHHHHHhCCC
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRI---TSKSDMWSLGVILYILLSGYP  242 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---~~~~DiwslG~il~~ll~g~~  242 (521)
                      |||||+|||+.++.....+||+|||+|+.......+.+.||||.|.|||++.+..+   ..++|+||+||+||.+|+|.+
T Consensus       300 RDiKPeNILl~~~~e~~llKItDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~p  379 (475)
T KOG0615|consen  300 RDIKPENILLSNDAEDCLLKITDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYP  379 (475)
T ss_pred             ccCCcceEEeccCCcceEEEecccchhhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCC
Confidence            99999999998877788999999999999888888889999999999999987643   458899999999999999999


Q ss_pred             CCCCCCcHH-HHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCC
Q 009980          243 PFIAQSNRQ-KQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDS  306 (521)
Q Consensus       243 pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~  306 (521)
                      ||.+..... ..++|.+|.+.+.+..|..+|.++++||.+||.+||++|||+.++|+||||+...
T Consensus       380 PFS~~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~  444 (475)
T KOG0615|consen  380 PFSEEYTDPSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKDAP  444 (475)
T ss_pred             CcccccCCccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhccc
Confidence            998876665 8899999999999999999999999999999999999999999999999998543

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=4.2e-65  Score=443.32  Aligned_cols=305  Identities=38%  Similarity=0.647  Sum_probs=278.1

Q ss_pred             ccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHH
Q 009980            5 TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALL   84 (521)
Q Consensus         5 ~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (521)
                      ...+.+.|++.+.||+|.|+.||++.++.  +|+.+|+|+++......                          ..-..+
T Consensus         6 ~~~f~d~y~l~e~igkG~FSvVrRc~~~~--tg~~fa~kiin~~k~~~--------------------------~~~e~l   57 (355)
T KOG0033|consen    6 STKFSDNYDVKEELGKGAFSVVRRCVHKT--TGLEFAAKIINTKKLSA--------------------------RDFQKL   57 (355)
T ss_pred             ccccchhhhHHHHHccCchHHHHHHHhcc--chHHHHHHHhhhhhhcc--------------------------ccHHHH
Confidence            45788999999999999999999999998  88999999997654432                          134568


Q ss_pred             HHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 009980           85 TNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIV  164 (521)
Q Consensus        85 ~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~  164 (521)
                      .+|+++-+.|     .||||+++++.+.+.+..|||+|++.|++|..-|..+.-+||..+..+++||++||.|||.+||+
T Consensus        58 ~rEarIC~~L-----qHP~IvrL~~ti~~~~~~ylvFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~Iv  132 (355)
T KOG0033|consen   58 EREARICRKL-----QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIV  132 (355)
T ss_pred             HHHHHHHHhc-----CCCcEeehhhhhcccceeEEEEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCce
Confidence            9999999998     99999999999999999999999999999998888878899999999999999999999999999


Q ss_pred             eccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCC
Q 009980          165 HRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF  244 (521)
Q Consensus       165 H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf  244 (521)
                      |||+||+|+++.+.+....+||+|||+|..........+..|||.|||||++...+|+..+|||++|||||.|+.|++||
T Consensus       133 HRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF  212 (355)
T KOG0033|consen  133 HRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF  212 (355)
T ss_pred             eccCChhheeeeeccCCCceeecccceEEEeCCccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCC
Confidence            99999999999988888999999999999877666667788999999999999999999999999999999999999999


Q ss_pred             CCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCCCcc-hhchHHHHHHHHhH
Q 009980          245 IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAKE-EEMDAEIVSRLQSF  323 (521)
Q Consensus       245 ~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~~~~-~~~~~~~~~~~~~~  323 (521)
                      ++.+...+++.|+++.+.++.+.|+++++++++||++||..||.+|+|+.|+|+|||+.+...-. .....+.+..+++|
T Consensus       213 ~~~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~r~~~As~~H~~dtvd~lrkf  292 (355)
T KOG0033|consen  213 WDEDQHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWICNRERVASAIHRQDTVDCLKKF  292 (355)
T ss_pred             CCccHHHHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCCchhcchHHHHHHhhhHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999999998654322 23356788999999


Q ss_pred             HHHhHHHHHHHHhhhhhHH
Q 009980          324 NARRKLRAAAIASVLSSTI  342 (521)
Q Consensus       324 ~~~~~~~~~~~~~~~~~~~  342 (521)
                      +++|+++.+.+..+.+..+
T Consensus       293 NarRKLKgavLtav~s~r~  311 (355)
T KOG0033|consen  293 NARRKLKGAILTTVIATRN  311 (355)
T ss_pred             hHHHHHHHHHHHHHHhccc
Confidence            9999999999988776543

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=9.7e-59  Score=453.60  Aligned_cols=257  Identities=35%  Similarity=0.608  Sum_probs=240.0

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      .+|+.++.||+|||+.||.+++..  +|..||+|++++.....+                         -....+.+||+
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~--tge~~A~KvVpk~~l~k~-------------------------~~reKv~~EIe   70 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLD--TGEVVAVKVVPKKLLKKP-------------------------KQREKVLNEIE   70 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcC--CCcEEEEEEeehHHhcCc-------------------------chHHHHHHHHH
Confidence            479999999999999999999988  889999999988655432                         23567899999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCC
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLK  169 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlk  169 (521)
                      +.++|     .|||||+++++|++.+++|||.|+|..++|..++..++.++|.+++.+++||+.||.|||+++|+|||||
T Consensus        71 IHr~L-----~HpnIV~f~~~FEDs~nVYivLELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLK  145 (592)
T KOG0575|consen   71 IHRSL-----KHPNIVQFYHFFEDSNNVYIVLELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLK  145 (592)
T ss_pred             HHHhc-----CCCcEEeeeeEeecCCceEEEEEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccc
Confidence            99999     9999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcEEEeeCCCCCCEEEeecCCCccCCCC-CCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCC
Q 009980          170 PENCLFLNDREDSPLKIMDFGLSSVEGYT-DPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQS  248 (521)
Q Consensus       170 p~Nil~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~  248 (521)
                      ..|+|+   +.+..|||+|||+|...... ....+.||||.|+|||++....++..+||||+||++|.||+|+|||...+
T Consensus       146 LGNlfL---~~~~~VKIgDFGLAt~le~~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~  222 (592)
T KOG0575|consen  146 LGNLFL---NENMNVKIGDFGLATQLEYDGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKT  222 (592)
T ss_pred             hhheee---cCcCcEEecccceeeeecCcccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccch
Confidence            999999   88889999999999987644 66788899999999999999999999999999999999999999999999


Q ss_pred             cHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCC
Q 009980          249 NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGD  305 (521)
Q Consensus       249 ~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~  305 (521)
                      ..+.+..|....+.+|.    .+|.++++||.+||..||.+|||++++|.|+||+..
T Consensus       223 vkety~~Ik~~~Y~~P~----~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~g  275 (592)
T KOG0575|consen  223 VKETYNKIKLNEYSMPS----HLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFKSG  275 (592)
T ss_pred             HHHHHHHHHhcCccccc----ccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhhCC
Confidence            99999999999999884    689999999999999999999999999999999543

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=2.9e-57  Score=422.93  Aligned_cols=270  Identities=33%  Similarity=0.562  Sum_probs=242.6

Q ss_pred             ccccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHH
Q 009980            3 QETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDA   82 (521)
Q Consensus         3 ~~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (521)
                      ..+-...++|.+.+.||+|+||+||+|+++.  ++..||||.+.+.....                          ....
T Consensus         3 ~~~~~~~~~y~~~~~iG~GsfavVykg~h~~--~~~~VAIK~i~~~~l~~--------------------------k~~e   54 (429)
T KOG0595|consen    3 GGSMRVVGDYELSREIGSGSFAVVYKGRHKK--SGTEVAIKCIAKKKLNK--------------------------KLVE   54 (429)
T ss_pred             CCcccccccceehhhccCcceEEEEEeEecc--CCceEEeeeehhhccCH--------------------------HHHH
Confidence            3455677899999999999999999999999  77899999998754321                          2345


Q ss_pred             HHHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 009980           83 LLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQAN  162 (521)
Q Consensus        83 ~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~  162 (521)
                      .+..|+.+|+.+     +|||||+++++.++++.+|||||||.||+|.+++...+.++|..++.++.||+.||++||+++
T Consensus        55 ~L~~Ei~iLkel-----~H~nIV~l~d~~~~~~~i~lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~  129 (429)
T KOG0595|consen   55 LLLSEIKILKEL-----KHPNIVRLLDCIEDDDFIYLVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENN  129 (429)
T ss_pred             HHHHHHHHHHhc-----CCcceeeEEEEEecCCeEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            578999999999     999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CeeccCCCCcEEEeeCCCC---CCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh
Q 009980          163 IVHRDLKPENCLFLNDRED---SPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS  239 (521)
Q Consensus       163 i~H~dlkp~Nil~~~~~~~---~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~  239 (521)
                      |+||||||+|||++....+   ..+||+|||+|+...+.....+.||+|.|||||++..++|+.|+|+||+|+|+|+|++
T Consensus       130 IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~  209 (429)
T KOG0595|consen  130 IIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLT  209 (429)
T ss_pred             eeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHh
Confidence            9999999999999765233   6799999999999888777888999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCC
Q 009980          240 GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDS  306 (521)
Q Consensus       240 g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~  306 (521)
                      |++||...+..+.+..+..+....+.. ...+++...+++...|..+|..|.+..+-+.|+++....
T Consensus       210 g~~Pf~a~t~~eL~~~~~k~~~~~~~~-~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~~p  275 (429)
T KOG0595|consen  210 GKPPFDAETPKELLLYIKKGNEIVPVL-PAELSNPLRELLISLLQRNPKDRISFEDFFDHPFLAANP  275 (429)
T ss_pred             CCCCccccCHHHHHHHHhccccccCch-hhhccCchhhhhhHHHhcCccccCchHHhhhhhhcccCc
Confidence            999999999999999888877654432 245778888999999999999999999999999998655

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=100.00  E-value=3.8e-57  Score=418.76  Aligned_cols=262  Identities=31%  Similarity=0.527  Sum_probs=238.1

Q ss_pred             cccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      -.++|++.++||+|+||+|++++.++  +++.||+|+++|......                         ...+....|
T Consensus        23 ~~~dF~~lkviGkG~fGkV~~Vrk~d--t~kiYAmKvl~K~~iv~~-------------------------~e~~~~~~E   75 (357)
T KOG0598|consen   23 GPDDFEILKVIGKGSFGKVFQVRKKD--TGKIYAMKVLKKKKIVEK-------------------------KEVRHTKAE   75 (357)
T ss_pred             ChhheeeeeeeeccCCceEEEEEEcc--cCceeehhhhhhhHhhhh-------------------------hhHHHHHHH
Confidence            36899999999999999999999998  899999999998655431                         224567889


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecc
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRD  167 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~d  167 (521)
                      ..+|.++     +||+||+++..|++.+.+|+|+||+.||+|+.+|.+.+.++|..++.++..|+.||.|||++||+|||
T Consensus        76 r~IL~~v-----~hPFiv~l~ysFQt~~kLylVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRD  150 (357)
T KOG0598|consen   76 RNILSKI-----KHPFIVKLIYSFQTEEKLYLVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRD  150 (357)
T ss_pred             HHHHHhC-----CCCcEeeeEEecccCCeEEEEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeecc
Confidence            9999998     99999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcEEEeeCCCCCCEEEeecCCCccC-CCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCC
Q 009980          168 LKPENCLFLNDREDSPLKIMDFGLSSVE-GYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIA  246 (521)
Q Consensus       168 lkp~Nil~~~~~~~~~~kl~Dfg~a~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~  246 (521)
                      |||+|||+   +..|.++|+|||+|+.. ..+....+.|||+.|||||++.+.+|+..+|+||||+++|+|++|.+||.+
T Consensus       151 lKPENILL---d~~GHi~LtDFgL~k~~~~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~  227 (357)
T KOG0598|consen  151 LKPENILL---DEQGHIKLTDFGLCKEDLKDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYA  227 (357)
T ss_pred             CCHHHeee---cCCCcEEEeccccchhcccCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcC
Confidence            99999999   89999999999999853 333455667999999999999999999999999999999999999999999


Q ss_pred             CCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCC----CHHHHHcCCcccCCCC
Q 009980          247 QSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRP----SAQELLNHPWVIGDSA  307 (521)
Q Consensus       247 ~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~----t~~~~l~h~~~~~~~~  307 (521)
                      .+...+.+.|..+....++   ..+|.+++++++++|..||.+|.    ++.++-+||||....+
T Consensus       228 ~~~~~~~~~I~~~k~~~~p---~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~inW  289 (357)
T KOG0598|consen  228 EDVKKMYDKILKGKLPLPP---GYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGINW  289 (357)
T ss_pred             ccHHHHHHHHhcCcCCCCC---ccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccCCH
Confidence            9999999999999855543   33799999999999999999995    7899999999987654

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=1.5e-55  Score=433.06  Aligned_cols=322  Identities=36%  Similarity=0.640  Sum_probs=272.2

Q ss_pred             ccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHH
Q 009980            5 TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALL   84 (521)
Q Consensus         5 ~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (521)
                      ...+...|++.+.||+|.||.||+|+++.  +|+.+|+|++++......                         .....+
T Consensus        30 ~~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~--tg~~~A~K~i~k~~~~~~-------------------------~~~~~v   82 (382)
T KOG0032|consen   30 SEDIKEKYELGRELGRGQFGVVYLCREKS--TGKEVACKVIPKRKLRGK-------------------------EDREDV   82 (382)
T ss_pred             cccccccEEehhhhCCCCceEEEEEEecC--CCceeEEEEeehhhcccc-------------------------ccHHHH
Confidence            46678899999999999999999999998  789999999987654321                         134568


Q ss_pred             HHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 009980           85 TNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIV  164 (521)
Q Consensus        85 ~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~  164 (521)
                      .+|+.+|+++    ..|||||.++++|++...+|+|||+|.||+|++++... .++|..+..+++|++.|++|||+.||+
T Consensus        83 ~~Ev~il~~l----~~hpniv~l~~~~e~~~~~~lvmEL~~GGeLfd~i~~~-~~sE~da~~~~~~il~av~~lH~~gvv  157 (382)
T KOG0032|consen   83 RREVAILQQL----SGHPNIVQLKDAFEDPDSVYLVMELCEGGELFDRIVKK-HYSERDAAGIIRQILEAVKYLHSLGVV  157 (382)
T ss_pred             HHHHHHHHhc----cCCCCEEEEEEEEEcCCeEEEEEEecCCchHHHHHHHc-cCCHHHHHHHHHHHHHHHHHHHhCCce
Confidence            9999999999    23999999999999999999999999999999999887 599999999999999999999999999


Q ss_pred             eccCCCCcEEEeeCCC-CCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCC
Q 009980          165 HRDLKPENCLFLNDRE-DSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPP  243 (521)
Q Consensus       165 H~dlkp~Nil~~~~~~-~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~p  243 (521)
                      ||||||+|+|+..... ++.+|++|||+|............+|||.|+|||++.+.+|+..+||||+||++|.|++|.+|
T Consensus       158 HrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~P  237 (382)
T KOG0032|consen  158 HRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPP  237 (382)
T ss_pred             eccCCHHHeeeccccCCCCcEEEeeCCCceEccCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCC
Confidence            9999999999976544 468999999999988776677888999999999999989999999999999999999999999


Q ss_pred             CCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCCCc-chhchHHHHHHHHh
Q 009980          244 FIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAK-EEEMDAEIVSRLQS  322 (521)
Q Consensus       244 f~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~~~-~~~~~~~~~~~~~~  322 (521)
                      |.+.+.......|..+.+.+..+.|+.+|..+++||.+||..||.+|+|+.++|+|||+.+.... ..........+..+
T Consensus       238 F~~~~~~~~~~~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~~~~~~~~~~~~~~~~~~~  317 (382)
T KOG0032|consen  238 FWGETEFEIFLAILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSIGEATNIPLDISVLSRSKQ  317 (382)
T ss_pred             CcCCChhHHHHHHHcCCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCccccCCcccccccccchhhhhHHH
Confidence            99999999999999999999999999999999999999999999999999999999999875332 22233333344444


Q ss_pred             HHHHhHHHHHHHHhhhhhHHHHhhHHHHHhhhccCCCCHHHHHHHHHHHHhhhcCCC
Q 009980          323 FNARRKLRAAAIASVLSSTIFLRRTKKLKNLLGSHDLNEEEIQNLRIHFRTICANGD  379 (521)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~~~~~~r~~~l~~l~~~~~~~~~~~~~l~~~F~~~D~~~~  379 (521)
                      +...++++..++.....+                .  +   +..++..|..+|.+++
T Consensus       318 ~~~~~~~~~~~~~~~~~~----------------~--~---~~~~~~~~~~~~~~~~  353 (382)
T KOG0032|consen  318 FLSMSKLKKLALRVLAES----------------L--S---ISGLKEMFKLMDTDNN  353 (382)
T ss_pred             HHHHHHHHHHHHHHHhhh----------------h--h---HHHHHHHHHhhccccc
Confidence            444444443322211111                1  1   5666777888877654

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.6e-56  Score=439.52  Aligned_cols=262  Identities=37%  Similarity=0.573  Sum_probs=242.0

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      .+-.+-|++++.||.|+.|.|.+|+|..  +|+..|||++.+.....                         ...-+.+.
T Consensus         8 ~~tiGpwkLgkTLG~Gstg~vrlakh~~--TGqlaaiKii~k~~~~s-------------------------~s~~~~Ie   60 (786)
T KOG0588|consen    8 KNTIGPWKLGKTLGKGSTGCVRLAKHAE--TGQLAAIKIIPKRSELS-------------------------SSQPAGIE   60 (786)
T ss_pred             cccccceeccccccCCCCceehhhhccc--ccceeEEEeeccccccc-------------------------cccccchh
Confidence            3456789999999999999999999998  89999999998753211                         12234588


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      +||-+|+-|     .||||+++|++|++..++|+|.||++||.|++++...++++|.+++.+++||+.|+.|||..+|+|
T Consensus        61 rEIviMkLi-----~HpnVl~LydVwe~~~~lylvlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icH  135 (786)
T KOG0588|consen   61 REIVIMKLI-----EHPNVLRLYDVWENKQHLYLVLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICH  135 (786)
T ss_pred             hhhHHHHHh-----cCCCeeeeeeeeccCceEEEEEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhccee
Confidence            999999998     999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCC-CchhhhHHHHHHHHHHHhCCCCC
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRI-TSKSDMWSLGVILYILLSGYPPF  244 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~~ll~g~~pf  244 (521)
                      |||||+|+|+   +..+++||+|||+|....+..-..+.||+|.|.|||++.+.+| +.++||||||||||.||||+.||
T Consensus       136 RDLKpENlLL---d~~~nIKIADFGMAsLe~~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPF  212 (786)
T KOG0588|consen  136 RDLKPENLLL---DVKNNIKIADFGMASLEVPGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPF  212 (786)
T ss_pred             ccCCchhhhh---hcccCEeeeccceeecccCCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCC
Confidence            9999999999   7777799999999998887777888999999999999999998 58999999999999999999999


Q ss_pred             CCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCC
Q 009980          245 IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDS  306 (521)
Q Consensus       245 ~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~  306 (521)
                      .+.+...++.++.+|.+..|    .++|+++++||.+||.+||.+|+|.+++++|||+.+..
T Consensus       213 dDdNir~LLlKV~~G~f~MP----s~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~~  270 (786)
T KOG0588|consen  213 DDDNIRVLLLKVQRGVFEMP----SNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGYT  270 (786)
T ss_pred             CCccHHHHHHHHHcCcccCC----CcCCHHHHHHHHHHhccCccccccHHHHhhCchhhcCC
Confidence            99999999999999999887    67999999999999999999999999999999998754

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=100.00  E-value=4.6e-57  Score=398.96  Aligned_cols=302  Identities=36%  Similarity=0.585  Sum_probs=261.8

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      .+...|.-.+.||+|..++|.++.++.  +++.+|+|++.........                  ..  .......-.+
T Consensus        14 ~fy~~y~pkeilgrgvss~vrRci~k~--t~~e~a~kii~~~at~~~~------------------e~--~~~~~EaT~~   71 (411)
T KOG0599|consen   14 GFYAKYEPKEILGRGVSSVVRRCIHKE--TGKEFAVKIIDVTATTESG------------------ET--PYEMREATRQ   71 (411)
T ss_pred             hHHhhcChHHHhcccchhhhhhhhhcc--cccceeEEEEEecccccCC------------------cc--HHHHHHHHHH
Confidence            456788889999999999999999998  8889999999764433210                  00  1111233567


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHR  166 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~  166 (521)
                      |+.+|+++    ..||+|+++.++|+++..+++|+|.|+.|.|+|++...-.+||.+++.|++|+++|+.|||.++||||
T Consensus        72 Ev~ILRqv----~GHP~II~l~D~yes~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHR  147 (411)
T KOG0599|consen   72 EISILRQV----MGHPYIIDLQDVYESDAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHR  147 (411)
T ss_pred             HHHHHHHh----cCCCcEEEeeeeccCcchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhc
Confidence            99999998    59999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCccccccccccc------CCCCchhhhHHHHHHHHHHHhC
Q 009980          167 DLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQ------DRITSKSDMWSLGVILYILLSG  240 (521)
Q Consensus       167 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~~ll~g  240 (521)
                      ||||+|||+   +.+.++||+|||+|+...++......||||+|+|||.+..      .+|+..+|+||+|||+|-|+.|
T Consensus       148 DLKpENILl---ddn~~i~isDFGFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaG  224 (411)
T KOG0599|consen  148 DLKPENILL---DDNMNIKISDFGFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAG  224 (411)
T ss_pred             ccChhheee---ccccceEEeccceeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcC
Confidence            999999999   8889999999999999998888999999999999999863      3688899999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCCCc-----chhchHH
Q 009980          241 YPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAK-----EEEMDAE  315 (521)
Q Consensus       241 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~~~-----~~~~~~~  315 (521)
                      .+||+.....-+++.|+.|.+.+..+.|.++|...++||++||++||.+|.|++++|.||||.+....     ......+
T Consensus       225 cpPFwHRkQmlMLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q~~~~~~r~msP~~~~~  304 (411)
T KOG0599|consen  225 CPPFWHRKQMLMLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQIAQQQARQMSPVVEVE  304 (411)
T ss_pred             CCchhHHHHHHHHHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcChHHHHHHHhcccccCCCcchh
Confidence            99999999999999999999999999999999999999999999999999999999999999542211     1112334


Q ss_pred             HHHHHHhHHHHhHHHHHHHHhh
Q 009980          316 IVSRLQSFNARRKLRAAAIASV  337 (521)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~~~  337 (521)
                      .+....+++++.+++.+.+...
T Consensus       305 ~~k~qt~~~aRkrFk~ail~vr  326 (411)
T KOG0599|consen  305 LVKDQTSERARKRFKVAILTVR  326 (411)
T ss_pred             hhhhhhhHHhhhheeeeeehHH
Confidence            5556677888888887766533

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=5.7e-56  Score=411.01  Aligned_cols=259  Identities=26%  Similarity=0.403  Sum_probs=228.4

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ++.+.++.||+|..|+||+|+|+.  +++.+|+|++.....                           .....++.+|++
T Consensus        79 ~dle~~~~lG~G~gG~V~kv~Hk~--t~~i~AlK~I~~~~~---------------------------~~~~~Qi~rEl~  129 (364)
T KOG0581|consen   79 SDLERLGVLGSGNGGTVYKVRHKP--TGKIYALKVILLNID---------------------------PALQKQILRELE  129 (364)
T ss_pred             HHhhhhhhcccCCCcEEEEEEEcC--CCeEEEEEeecccCC---------------------------HHHHHHHHHHHH
Confidence            467788999999999999999998  899999999942111                           134567899999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCC-eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecc
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQN-GVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ-ANIVHRD  167 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~-~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~-~~i~H~d  167 (521)
                      ++++.     +||+||++|+.|..+. .++|+||||+||+|.+.+...++++|.....|+.+++.||.|||. ++|+|||
T Consensus       130 il~~~-----~spyIV~~ygaF~~~~~~isI~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRD  204 (364)
T KOG0581|consen  130 ILRSC-----QSPYIVGFYGAFYSNGEEISICMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRD  204 (364)
T ss_pred             HHhhC-----CCCCeeeEeEEEEeCCceEEeehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeecc
Confidence            99998     9999999999999999 599999999999999999988999999999999999999999995 9999999


Q ss_pred             CCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 009980          168 LKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQ  247 (521)
Q Consensus       168 lkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~  247 (521)
                      |||+|||+   +..+.|||||||.|+....+ ...+.+||..|||||.+.+..|+.++||||||+++.|+++|+.||...
T Consensus       205 IKPsNlLv---NskGeVKicDFGVS~~lvnS-~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~  280 (364)
T KOG0581|consen  205 IKPSNLLV---NSKGEVKICDFGVSGILVNS-IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPP  280 (364)
T ss_pred             CCHHHeee---ccCCCEEeccccccHHhhhh-hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCc
Confidence            99999999   88999999999999877654 557788999999999999999999999999999999999999999774


Q ss_pred             -----CcHHHHHHHHcCCCCCchhhhh-ccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCCCcc
Q 009980          248 -----SNRQKQQMIMAGEFSFYEQTWK-NISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAKE  309 (521)
Q Consensus       248 -----~~~~~~~~i~~~~~~~~~~~~~-~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~~~~  309 (521)
                           +..+.+..|..+..+-.   +. .+|+++++||..||.+||.+|||+.|+++|||++......
T Consensus       281 ~~~~~~~~~Ll~~Iv~~ppP~l---P~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~~~~  345 (364)
T KOG0581|consen  281 NPPYLDIFELLCAIVDEPPPRL---PEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKFEDPN  345 (364)
T ss_pred             CCCCCCHHHHHHHHhcCCCCCC---CcccCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhccccc
Confidence                 45566677776543322   23 3899999999999999999999999999999998765443

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=100.00  E-value=3.1e-56  Score=398.65  Aligned_cols=259  Identities=32%  Similarity=0.541  Sum_probs=237.7

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      .-.++|++.+.||.|+||.|.+++++.  ++..||+|++.+......                         .......+
T Consensus        41 ~~l~dfe~~~tlGtGSFGrV~LVr~k~--~g~yYAmKvL~k~~vVkl-------------------------KQveH~~n   93 (355)
T KOG0616|consen   41 YSLQDFERLKTLGTGSFGRVHLVREKH--SGNYYAMKVLDKQKVVKL-------------------------KQVEHTHN   93 (355)
T ss_pred             cchhhhhheeeeccCccceEEEEEEcc--CCceeehhhcCHHHHHHH-------------------------HHHHHHhh
Confidence            456789999999999999999999998  789999999987544321                         12345778


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHR  166 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~  166 (521)
                      |.++|+.+     .||+++++++.|.+.+.+|+||||++||.|+.++.+.+++++..++.++.||+.||.|||+++|++|
T Consensus        94 Ek~vL~~v-----~~PFlv~l~~t~~d~~~lymvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYR  168 (355)
T KOG0616|consen   94 EKRVLKAV-----SHPFLVKLYGTFKDNSNLYMVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYR  168 (355)
T ss_pred             HHHHHhhc-----cCceeEEEEEeeccCCeEEEEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeec
Confidence            99999998     8999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCC
Q 009980          167 DLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIA  246 (521)
Q Consensus       167 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~  246 (521)
                      ||||+|||+   +.+|.+||+|||+|+....  ...+.||||.|+|||++...+|+.++|.|||||++|||+.|.+||.+
T Consensus       169 DLKPENiLl---D~~G~iKitDFGFAK~v~~--rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~  243 (355)
T KOG0616|consen  169 DLKPENLLL---DQNGHIKITDFGFAKRVSG--RTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYD  243 (355)
T ss_pred             cCChHHeee---ccCCcEEEEeccceEEecC--cEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcC
Confidence            999999999   9999999999999998653  35678999999999999999999999999999999999999999999


Q ss_pred             CCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCC-----CCHHHHHcCCcccCCC
Q 009980          247 QSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR-----PSAQELLNHPWVIGDS  306 (521)
Q Consensus       247 ~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R-----~t~~~~l~h~~~~~~~  306 (521)
                      .+...++++|..+...+|    +.+|+++++||.++|++|-.+|     ....++.+||||.+-.
T Consensus       244 ~~~~~iY~KI~~~~v~fP----~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~  304 (355)
T KOG0616|consen  244 DNPIQIYEKILEGKVKFP----SYFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVD  304 (355)
T ss_pred             CChHHHHHHHHhCcccCC----cccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCccccccc
Confidence            999999999999999988    4589999999999999999999     4578999999998543

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.5e-54  Score=426.62  Aligned_cols=261  Identities=37%  Similarity=0.623  Sum_probs=236.2

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      ...+.|.+++.||+|+||+|+.|.+..  ++..||+|++.+......                      . ......+.+
T Consensus        14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~--t~~~vAiKii~~~~~~~~----------------------~-~~~~~~i~r   68 (370)
T KOG0583|consen   14 LSIGKYELGRTLGSGSFGKVKLAKHRL--TGEKVAIKIIDRKKVSSK----------------------S-QKLDELIKR   68 (370)
T ss_pred             cccCceeeeeeecCCCCeeEEEeeecc--CCCeEEEEEechhccccc----------------------c-cccchhhHH
Confidence            567799999999999999999999998  779999998876532210                      0 012344678


Q ss_pred             HHHHHHHHhhccCC-CCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           87 EILVMRKIVENVSP-HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        87 E~~~l~~l~~~~~~-hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      |+.+++++     . ||||+++++++.....+|+|||||.||+|++++...++++|.+++.+++||++|++|||++||+|
T Consensus        69 Ei~~~~~~-----~~HpnI~~l~ev~~t~~~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~H  143 (370)
T KOG0583|consen   69 EISILRRL-----RSHPNIIRLLEVFATPTKIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVH  143 (370)
T ss_pred             HHHHHHHh-----ccCCCEeEEEEEEecCCeEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEee
Confidence            99999999     6 99999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCCC-CCEEEeecCCCccC-CCCCCcccccCCcccccccccccCC-CC-chhhhHHHHHHHHHHHhCC
Q 009980          166 RDLKPENCLFLNDRED-SPLKIMDFGLSSVE-GYTDPVVGLFGSIDYVSPEALLQDR-IT-SKSDMWSLGVILYILLSGY  241 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~-~~~kl~Dfg~a~~~-~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~~DiwslG~il~~ll~g~  241 (521)
                      |||||+|||+   +.+ +.+||+|||++... .......+.||||.|+|||++.+.. |+ .++|||||||+||.|++|+
T Consensus       144 RDLK~ENill---d~~~~~~Kl~DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~  220 (370)
T KOG0583|consen  144 RDLKPENILL---DGNEGNLKLSDFGLSAISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGR  220 (370)
T ss_pred             CCCCHHHEEe---cCCCCCEEEeccccccccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCC
Confidence            9999999999   666 99999999999987 4556778889999999999999877 85 8999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHHcCCCCCchhhhhcc-CHHHHHHHHHhccCCCCCCCCHHHHHcCCcccC
Q 009980          242 PPFIAQSNRQKQQMIMAGEFSFYEQTWKNI-SSSAKQLISSLLTVDPNRRPSAQELLNHPWVIG  304 (521)
Q Consensus       242 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~-s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~  304 (521)
                      .||...+...+...|.++.+.++.    .+ |+++++|+.+||..||.+|+|+.+++.||||+.
T Consensus       221 ~PF~d~~~~~l~~ki~~~~~~~p~----~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~  280 (370)
T KOG0583|consen  221 LPFDDSNVPNLYRKIRKGEFKIPS----YLLSPEARSLIEKMLVPDPSTRITLLEILEHPWFQK  280 (370)
T ss_pred             CCCCCccHHHHHHHHhcCCccCCC----CcCCHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence            999999999999999999998874    35 999999999999999999999999999999987

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=100.00  E-value=3.5e-55  Score=421.57  Aligned_cols=263  Identities=32%  Similarity=0.539  Sum_probs=237.0

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      ..-..+|.+++.||.|+|++|++|+.+.  +++.||||++.|.-....                         ...+.+.
T Consensus        69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~--t~keYAiKVl~K~~Iike-------------------------~KvkYV~  121 (604)
T KOG0592|consen   69 KKTPNDFKFGKILGEGSYSTVVLAREKA--TGKEYAIKVLDKRYIIKE-------------------------KKVKYVT  121 (604)
T ss_pred             cCChhhcchhheeccccceeEEEeeecC--CCceeeHhhhhHHHHHhh-------------------------cccchhh
Confidence            4556799999999999999999999999  899999999987543221                         1123366


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      .|-.+|.+|    .+||.|++|+..|+++..+|+|+||+++|+|.++|.+.+.|.+..++.++.||+.||.|||++||||
T Consensus       122 ~Ek~~l~~L----~~hPgivkLy~TFQD~~sLYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIH  197 (604)
T KOG0592|consen  122 REKEALTQL----SGHPGIVKLYFTFQDEESLYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIH  197 (604)
T ss_pred             HHHHHHHHh----hCCCCeEEEEEEeecccceEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCcee
Confidence            777888877    5999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC--------------cccccCCcccccccccccCCCCchhhhHHHH
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP--------------VVGLFGSIDYVSPEALLQDRITSKSDMWSLG  231 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~--------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG  231 (521)
                      |||||+|||+   +.++.+||+|||.|+...+...              ..+.+||..|.+||++..+..++.+|+|+||
T Consensus       198 RDlKPENILL---d~dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlG  274 (604)
T KOG0592|consen  198 RDLKPENILL---DKDGHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALG  274 (604)
T ss_pred             ccCChhheeE---cCCCcEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHH
Confidence            9999999999   9999999999999986543211              1457899999999999999999999999999


Q ss_pred             HHHHHHHhCCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCC
Q 009980          232 VILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDS  306 (521)
Q Consensus       232 ~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~  306 (521)
                      ||+|.|+.|.+||.+.++..+++.|+.-.+.++    +++++.+++||.++|..||.+|+|+++|..||||.+-.
T Consensus       275 CilyQmlaG~PPFra~NeyliFqkI~~l~y~fp----~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~Vd  345 (604)
T KOG0592|consen  275 CILYQMLAGQPPFRAANEYLIFQKIQALDYEFP----EGFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGVD  345 (604)
T ss_pred             HHHHHHhcCCCCCccccHHHHHHHHHHhcccCC----CCCCHHHHHHHHHHHccCccccccHHHHhhCcccccCC
Confidence            999999999999999999999999999999988    56889999999999999999999999999999998644

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=100.00  E-value=4.4e-54  Score=414.35  Aligned_cols=267  Identities=30%  Similarity=0.516  Sum_probs=233.3

Q ss_pred             ccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHH
Q 009980            5 TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALL   84 (521)
Q Consensus         5 ~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (521)
                      .+.-.++|+++++||+|+||.||+|+.+.  +|..||+|+++|+.....                         -....+
T Consensus       136 ~r~~~~DFe~Lk~IgkGAfGeVrLarKk~--Tg~iyAmK~LkKS~M~~~-------------------------~Qv~hV  188 (550)
T KOG0605|consen  136 TRLSLDDFELLKVIGKGAFGEVRLARKKD--TGEIYAMKILKKSEMLKK-------------------------NQVEHV  188 (550)
T ss_pred             ccCCcccchhheeeccccceeEEEEEEcc--CCcEEeeecccHHHHHhh-------------------------hhHHHH
Confidence            45567899999999999999999999998  899999999998765331                         112346


Q ss_pred             HHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 009980           85 TNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIV  164 (521)
Q Consensus        85 ~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~  164 (521)
                      ..|-.+|...     ++|+||+++..|++..++||||||++||++..+|.+.+.++|..++.++.+++.|+.-+|+.|++
T Consensus       189 ~aERdiL~~~-----ds~~vVKLyYsFQD~~~LYLiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyI  263 (550)
T KOG0605|consen  189 RAERDILAEV-----DSPWVVKLYYSFQDKEYLYLIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYI  263 (550)
T ss_pred             HHHHHHhhhc-----CCCcEEEEEEEecCCCeeEEEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcc
Confidence            6677777665     99999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eccCCCCcEEEeeCCCCCCEEEeecCCCccCCC----------------------CC-C---------------------
Q 009980          165 HRDLKPENCLFLNDREDSPLKIMDFGLSSVEGY----------------------TD-P---------------------  200 (521)
Q Consensus       165 H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~----------------------~~-~---------------------  200 (521)
                      ||||||+|+|+   +..|.+||+|||+|.....                      .. +                     
T Consensus       264 HRDIKPdNlLi---D~~GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~n  340 (550)
T KOG0605|consen  264 HRDIKPDNLLI---DAKGHIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRN  340 (550)
T ss_pred             cccCChhheee---cCCCCEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhh
Confidence            99999999999   9999999999999842100                      00 0                     


Q ss_pred             ----cccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHH
Q 009980          201 ----VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAK  276 (521)
Q Consensus       201 ----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~  276 (521)
                          ..+.+|||.|||||++.+.+|+..||+||||||+||||.|.|||.+.++.+..++|......+..+.-..+|++++
T Consensus       341 rr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~  420 (550)
T KOG0605|consen  341 RRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAK  420 (550)
T ss_pred             hhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHH
Confidence                0135799999999999999999999999999999999999999999999999999998875444444466899999


Q ss_pred             HHHHHhccCCCCCCC---CHHHHHcCCcccCCCC
Q 009980          277 QLISSLLTVDPNRRP---SAQELLNHPWVIGDSA  307 (521)
Q Consensus       277 ~li~~~l~~dp~~R~---t~~~~l~h~~~~~~~~  307 (521)
                      |||.+||+ ||.+|.   +++||..||||.+-..
T Consensus       421 DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v~W  453 (550)
T KOG0605|consen  421 DLITRLLC-DPENRLGSKGAEEIKKHPFFKGVDW  453 (550)
T ss_pred             HHHHHHhc-CHHHhcCcccHHHHhcCCccccCCc
Confidence            99999999 999996   5999999999987554

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=100.00  E-value=2.3e-54  Score=386.78  Aligned_cols=263  Identities=34%  Similarity=0.634  Sum_probs=237.0

Q ss_pred             ccccceeec-ccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            7 KLTDEYEVT-DILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         7 ~~~~~Y~~~-~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      .+.++|.+. ++||-|-.|.|..+.++.  +++.+|+|++..                                 .....
T Consensus        58 ~itedY~is~qvLG~GinGkV~~C~~k~--T~ekfALKvL~D---------------------------------s~KAR  102 (400)
T KOG0604|consen   58 SITEDYSISWQVLGAGINGKVVQCVHKR--TQEKFALKVLLD---------------------------------SPKAR  102 (400)
T ss_pred             cchhhheehhhhhccccCCceEEEEecc--chhhhHHHHHhc---------------------------------CHHHH
Confidence            478899996 689999999999999999  889999999853                                 22345


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEe----CCeEEEEEeccCCCchHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHH
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYED----QNGVHLILELCSGGELFDRIVAQER--YMEVGAAAVIRQIAEGLAALH  159 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~----~~~~~lv~e~~~gg~L~~~l~~~~~--~~~~~~~~i~~qil~al~~lH  159 (521)
                      +|++..-..    +.|||||.++++|++    ...+.+|||.++||+|+.++..++.  |+|.++..|++||+.|+.|||
T Consensus       103 rEVeLHw~~----s~h~~iV~IidVyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH  178 (400)
T KOG0604|consen  103 REVELHWMA----SGHPHIVSIIDVYENSYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLH  178 (400)
T ss_pred             hHhhhhhhh----cCCCceEEeehhhhhhccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHH
Confidence            677666554    589999999999864    3568899999999999999998876  999999999999999999999


Q ss_pred             HCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh
Q 009980          160 QANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS  239 (521)
Q Consensus       160 ~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~  239 (521)
                      +.+|.||||||+|+|+.....+..+||+|||+|+.........+.|-||+|.|||++...+|+..+|+||+||++|.|++
T Consensus       179 ~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLC  258 (400)
T KOG0604|consen  179 SMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLC  258 (400)
T ss_pred             hcchhhccCChhheeeecCCCCcceEecccccccccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhc
Confidence            99999999999999998888889999999999998776777788899999999999999999999999999999999999


Q ss_pred             CCCCCCCCC----cHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCCCc
Q 009980          240 GYPPFIAQS----NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAK  308 (521)
Q Consensus       240 g~~pf~~~~----~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~~~  308 (521)
                      |++||....    ...+...|..|.+.|+.+.|+.+|..++++|+.+|..+|.+|.|+.++++|||+.+....
T Consensus       259 GyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~~v  331 (400)
T KOG0604|consen  259 GYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYEAV  331 (400)
T ss_pred             CCCcccccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhcccccC
Confidence            999997754    345778999999999999999999999999999999999999999999999999876543

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=100.00  E-value=1.1e-53  Score=383.04  Aligned_cols=257  Identities=25%  Similarity=0.445  Sum_probs=221.5

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      +.|+...++|+|+||+||+|+++.  +|+.||||.+..+.-                          .....+-..+||+
T Consensus         2 ekYE~LgkvGEGSYGvV~KCrnk~--TgqIVAIKkF~Esed--------------------------d~~VkKIAlREIr   53 (396)
T KOG0593|consen    2 EKYEKLGKVGEGSYGVVMKCRNKD--TGQIVAIKKFVESED--------------------------DPVVKKIALREIR   53 (396)
T ss_pred             cHHhhhhccccCcceEEEEeccCC--cccEEEEEeeccCCc--------------------------cHHHHHHHHHHHH
Confidence            579999999999999999999999  899999999853221                          1133455679999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQANIVHRDL  168 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~~~i~H~dl  168 (521)
                      +|++|     +|||+|.++++|.....+|||+|||+. ++.+.+... ..+++..+..++.|++.|+.|||+++++||||
T Consensus        54 mLKqL-----kH~NLVnLiEVFrrkrklhLVFE~~dh-TvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDI  127 (396)
T KOG0593|consen   54 MLKQL-----KHENLVNLIEVFRRKRKLHLVFEYCDH-TVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDI  127 (396)
T ss_pred             HHHhc-----ccchHHHHHHHHHhcceeEEEeeecch-HHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccC
Confidence            99999     999999999999999999999999987 666666554 45899999999999999999999999999999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCccCC-CCCCcccccCCccccccccccc-CCCCchhhhHHHHHHHHHHHhCCCCCCC
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSSVEG-YTDPVVGLFGSIDYVSPEALLQ-DRITSKSDMWSLGVILYILLSGYPPFIA  246 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~-~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~  246 (521)
                      ||+|||+   ..++.+||||||+|+... ++...+..+.|.+|+|||.+.+ .+|+.++||||+||++.||++|.+.|.+
T Consensus       128 KPENILi---t~~gvvKLCDFGFAR~L~~pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG  204 (396)
T KOG0593|consen  128 KPENILI---TQNGVVKLCDFGFARTLSAPGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPG  204 (396)
T ss_pred             ChhheEE---ecCCcEEeccchhhHhhcCCcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCC
Confidence            9999999   788999999999999876 6666777889999999999987 6899999999999999999999999999


Q ss_pred             CCcHHHHHHHHcCCCCC---------------------------chhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          247 QSNRQKQQMIMAGEFSF---------------------------YEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       247 ~~~~~~~~~i~~~~~~~---------------------------~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      .++-+.+..|......+                           ....++.++.-+.+|+.+||..||.+|++.+++|.|
T Consensus       205 ~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H  284 (396)
T KOG0593|consen  205 RSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHH  284 (396)
T ss_pred             cchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcC
Confidence            98877665554321111                           112345678889999999999999999999999999


Q ss_pred             Cccc
Q 009980          300 PWVI  303 (521)
Q Consensus       300 ~~~~  303 (521)
                      |||.
T Consensus       285 ~yFd  288 (396)
T KOG0593|consen  285 PYFD  288 (396)
T ss_pred             hHHH
Confidence            9994

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=1.4e-53  Score=395.71  Aligned_cols=259  Identities=33%  Similarity=0.559  Sum_probs=241.3

Q ss_pred             ccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHH
Q 009980            5 TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALL   84 (521)
Q Consensus         5 ~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (521)
                      ..++..+|++.+.||+|.||+|.+|....  .|+.||||.+++....+.                         ..-..+
T Consensus        48 khnlkHRyE~~etLGkGTYGKVk~A~e~~--sgR~VAiKsIrKdkIkde-------------------------qDlvhI  100 (668)
T KOG0611|consen   48 KHNLKHRYEITETLGKGTYGKVKLAYEHK--SGREVAIKSIRKDKIKDE-------------------------QDLVHI  100 (668)
T ss_pred             ccchhhHHHHHHHhcCCcccceeehhhcc--CCcEeehhhhhhhhcccH-------------------------HHHHHH
Confidence            45678899999999999999999999987  899999999998776542                         223458


Q ss_pred             HHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 009980           85 TNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIV  164 (521)
Q Consensus        85 ~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~  164 (521)
                      .+||++|..|     +||||+.+|++|+..+.+.|||||..||+|+|++..+++++|.+++.+++||.+|+.|||.++++
T Consensus       101 RREIeIMSsL-----NHPhII~IyEVFENkdKIvivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVv  175 (668)
T KOG0611|consen  101 RREIEIMSSL-----NHPHIIQIYEVFENKDKIVIVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVV  175 (668)
T ss_pred             HHHHHHHhhc-----CCCceeehhhhhcCCceEEEEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccce
Confidence            8999999999     99999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCC-CchhhhHHHHHHHHHHHhCCCC
Q 009980          165 HRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRI-TSKSDMWSLGVILYILLSGYPP  243 (521)
Q Consensus       165 H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~~ll~g~~p  243 (521)
                      |||||.+|||+   +.++++||+|||++..+.......++||+|.|.+||++.+.+| ++.+|.|||||+||.|+.|..|
T Consensus       176 HRDLKLENILL---D~N~NiKIADFGLSNly~~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMP  252 (668)
T KOG0611|consen  176 HRDLKLENILL---DQNNNIKIADFGLSNLYADKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMP  252 (668)
T ss_pred             ecccchhheee---cCCCCeeeeccchhhhhccccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccc
Confidence            99999999999   8999999999999998887788889999999999999999998 6899999999999999999999


Q ss_pred             CCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCccc
Q 009980          244 FIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVI  303 (521)
Q Consensus       244 f~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~  303 (521)
                      |.+.+...+.++|.+|.+.-+.     -|..+.-||+.||-+||++|.|++++..|-|++
T Consensus       253 FDG~Dhk~lvrQIs~GaYrEP~-----~PSdA~gLIRwmLmVNP~RRATieDiAsHWWvN  307 (668)
T KOG0611|consen  253 FDGRDHKRLVRQISRGAYREPE-----TPSDASGLIRWMLMVNPERRATIEDIASHWWVN  307 (668)
T ss_pred             cCCchHHHHHHHhhcccccCCC-----CCchHHHHHHHHHhcCcccchhHHHHhhhheee
Confidence            9999999999999999886553     477899999999999999999999999999986

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.5e-53  Score=404.16  Aligned_cols=264  Identities=32%  Similarity=0.474  Sum_probs=229.7

Q ss_pred             ccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHH
Q 009980            5 TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALL   84 (521)
Q Consensus         5 ~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (521)
                      ...+.++|.+++.||.|.||.||+|+.+.  ++..||||.+++.-                           .++++..-
T Consensus         5 ~~~~m~RY~~i~klGDGTfGsV~la~~~~--~~~~VAIK~MK~Kf---------------------------~s~ee~~n   55 (538)
T KOG0661|consen    5 QVIFMDRYTVIRKLGDGTFGSVYLAKSKE--TGELVAIKKMKKKF---------------------------YSWEECMN   55 (538)
T ss_pred             ehhHHHHHHHHHHhcCCcceeEEEeeecC--CCceeeHHHHHhhh---------------------------ccHHHHHH
Confidence            34567899999999999999999999998  78889999997632                           23566778


Q ss_pred             HHHHHHHHHHhhccCC-CCCccceeEEEEeCC-eEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC
Q 009980           85 TNEILVMRKIVENVSP-HPNVIDLYDVYEDQN-GVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQA  161 (521)
Q Consensus        85 ~~E~~~l~~l~~~~~~-hpniv~~~~~~~~~~-~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~~  161 (521)
                      .+|+..|++|     + |||||++.+++.+.+ .+|+|||||+. +|++++..+ ..|+|..++.|+.||+.||+|+|.+
T Consensus        56 LREvksL~kl-----n~hpniikL~Evi~d~~~~L~fVfE~Md~-NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~  129 (538)
T KOG0661|consen   56 LREVKSLRKL-----NPHPNIIKLKEVIRDNDRILYFVFEFMDC-NLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKH  129 (538)
T ss_pred             HHHHHHHHhc-----CCCCcchhhHHHhhccCceEeeeHHhhhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhc
Confidence            8999999999     6 999999999998888 99999999966 999999764 5699999999999999999999999


Q ss_pred             CCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCccccccccccc-CCCCchhhhHHHHHHHHHHHhC
Q 009980          162 NIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQ-DRITSKSDMWSLGVILYILLSG  240 (521)
Q Consensus       162 ~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~ll~g  240 (521)
                      |+.|||+||+|||+   .....+||+|||+|+......+.+..+.|.+|+|||++.. +.|+.++||||+|||++|+.+-
T Consensus       130 GfFHRDlKPENiLi---~~~~~iKiaDFGLARev~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sL  206 (538)
T KOG0661|consen  130 GFFHRDLKPENILI---SGNDVIKIADFGLAREVRSKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSL  206 (538)
T ss_pred             CcccccCChhheEe---cccceeEecccccccccccCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHh
Confidence            99999999999999   5578899999999999988888899999999999999874 5689999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHHcCC-------------------CCCc-------hhhhhccCHHHHHHHHHhccCCCCCCCCHH
Q 009980          241 YPPFIAQSNRQKQQMIMAGE-------------------FSFY-------EQTWKNISSSAKQLISSLLTVDPNRRPSAQ  294 (521)
Q Consensus       241 ~~pf~~~~~~~~~~~i~~~~-------------------~~~~-------~~~~~~~s~~~~~li~~~l~~dp~~R~t~~  294 (521)
                      ++.|.|.++.+.+.+|..-.                   +.++       ....++.++++.++|.+||.+||.+||||.
T Consensus       207 rPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~  286 (538)
T KOG0661|consen  207 RPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTAS  286 (538)
T ss_pred             cccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHH
Confidence            99999998877665554311                   1111       122355789999999999999999999999


Q ss_pred             HHHcCCcccCCC
Q 009980          295 ELLNHPWVIGDS  306 (521)
Q Consensus       295 ~~l~h~~~~~~~  306 (521)
                      ++|+||||+...
T Consensus       287 ~al~~pffq~~~  298 (538)
T KOG0661|consen  287 QALQHPFFQVGR  298 (538)
T ss_pred             HHhcCccccccc
Confidence            999999997543

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=3e-53  Score=368.79  Aligned_cols=259  Identities=34%  Similarity=0.559  Sum_probs=238.5

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      ..-.++|++++.||+|.||.||+|+.+.  ++-.||+|++.++....                         ......+.
T Consensus        18 ~~~l~dfeigr~LgkgkFG~vYlarekk--s~~IvalKVlfKsqi~~-------------------------~~v~~qlr   70 (281)
T KOG0580|consen   18 TWTLDDFEIGRPLGKGKFGNVYLAREKK--SLFIVALKVLFKSQILK-------------------------TQVEHQLR   70 (281)
T ss_pred             ccchhhccccccccCCccccEeEeeecc--CCcEEEEeeeeHHHHHH-------------------------hcchhhhh
Confidence            3456899999999999999999999998  88899999998765432                         12345688


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIV--AQERYMEVGAAAVIRQIAEGLAALHQANI  163 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~--~~~~~~~~~~~~i~~qil~al~~lH~~~i  163 (521)
                      +|+++...|     +||||+++|++|.+...+||++||..+|+|+..+.  ...++++..++.++.|++.||.|||.++|
T Consensus        71 REiEIqs~L-----~hpnilrlY~~fhd~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~V  145 (281)
T KOG0580|consen   71 REIEIQSHL-----RHPNILRLYGYFHDSKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRV  145 (281)
T ss_pred             heeEeeccc-----CCccHHhhhhheeccceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCc
Confidence            999999998     99999999999999999999999999999999998  66789999999999999999999999999


Q ss_pred             eeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCC
Q 009980          164 VHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPP  243 (521)
Q Consensus       164 ~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~p  243 (521)
                      +||||||+|+|+   +..+.+||+|||.+.... .....+.|||..|.|||+..+..++..+|+|++|++.|+++.|.+|
T Consensus       146 IhRdiKpenlLl---g~~~~lkiAdfGwsV~~p-~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~pp  221 (281)
T KOG0580|consen  146 IHRDIKPENLLL---GSAGELKIADFGWSVHAP-SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPP  221 (281)
T ss_pred             ccCCCCHHHhcc---CCCCCeeccCCCceeecC-CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCc
Confidence            999999999999   788889999999998765 5556778999999999999999999999999999999999999999


Q ss_pred             CCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccC
Q 009980          244 FIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIG  304 (521)
Q Consensus       244 f~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~  304 (521)
                      |...+..+.++.|.+....+|    ..+|.+++++|.+||.++|.+|.+..|++.|||+..
T Consensus       222 Fes~~~~etYkrI~k~~~~~p----~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a  278 (281)
T KOG0580|consen  222 FESQSHSETYKRIRKVDLKFP----STISGGAADLISRLLVKNPIERLALTEVMDHPWIVA  278 (281)
T ss_pred             hhhhhhHHHHHHHHHccccCC----cccChhHHHHHHHHhccCccccccHHHHhhhHHHHh
Confidence            999999999999999988887    669999999999999999999999999999999964

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=100.00  E-value=7.6e-53  Score=405.77  Aligned_cols=254  Identities=31%  Similarity=0.534  Sum_probs=233.2

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ++|.+.+.||+|+||.||+|+.|.  +.+.||+|.+.|.+...                          .+-..+.+|++
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~--t~~~vAik~i~K~gr~~--------------------------k~l~~l~~ev~   53 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKY--TIQVVAIKFIDKSGRNE--------------------------KELKNLRQEVR   53 (808)
T ss_pred             cchhHHHHhcCCccceeeeccccc--ceeEEEEEEehhcCCch--------------------------HHHHHHHHHHH
Confidence            589999999999999999999998  88999999998754322                          22345889999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCC
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLK  169 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlk  169 (521)
                      ++++|     +||||+.++++|++..++++|+|||.| +|+.++...+.++|+.++.++.+++.||.|||+++|.|||+|
T Consensus        54 i~r~l-----kHpniv~m~esfEt~~~~~vVte~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~k  127 (808)
T KOG0597|consen   54 ILRSL-----KHPNIVEMLESFETSAHLWVVTEYAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMK  127 (808)
T ss_pred             HHHhc-----CCcchhhHHHhhcccceEEEEehhhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCC
Confidence            99999     999999999999999999999999988 999999999999999999999999999999999999999999


Q ss_pred             CCcEEEeeCCCCCCEEEeecCCCccCCCCC-CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCC
Q 009980          170 PENCLFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQS  248 (521)
Q Consensus       170 p~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~  248 (521)
                      |.|||+   +..+.+|+||||+|+...... ...+..|||.|||||.+.+++|+..+|+||||||+|||++|+|||...+
T Consensus       128 PqniLl---~~~~~~KlcdFg~Ar~m~~~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~s  204 (808)
T KOG0597|consen  128 PQNILL---EKGGTLKLCDFGLARAMSTNTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARS  204 (808)
T ss_pred             cceeee---cCCCceeechhhhhhhcccCceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHH
Confidence            999999   889999999999999766543 3355679999999999999999999999999999999999999999999


Q ss_pred             cHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccC
Q 009980          249 NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIG  304 (521)
Q Consensus       249 ~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~  304 (521)
                      ..+..+.|......++.    ..|..+++|+..+|.+||.+|.|+.+++.|||.++
T Consensus       205 i~~Lv~~I~~d~v~~p~----~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~  256 (808)
T KOG0597|consen  205 ITQLVKSILKDPVKPPS----TASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKG  256 (808)
T ss_pred             HHHHHHHHhcCCCCCcc----cccHHHHHHHHHHhhcChhhcccHHHHhcChHHhh
Confidence            99999999888777663    68999999999999999999999999999999875

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2e-53  Score=377.64  Aligned_cols=250  Identities=26%  Similarity=0.457  Sum_probs=218.6

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      ..-..+|+|.+.||+|+||.||+|++..  ++..+|.|-+.-....                          ....+.+.
T Consensus        15 ~~~l~~y~Il~~IG~GsFg~vykv~~~~--~g~l~a~K~i~f~~md--------------------------~k~rq~~v   66 (375)
T KOG0591|consen   15 QKTLADYQILKKIGRGSFGEVYKVQCLL--DGKLVALKKIQFGMMD--------------------------AKARQDCV   66 (375)
T ss_pred             cccHHHHHHHHHHcCCcchheEEeeecc--Ccchhhhhhcchhhcc--------------------------HHHHHHHH
Confidence            4455679999999999999999999998  8899999998632221                          23456688


Q ss_pred             HHHHHHHHHhhccCCCCCccceeE-EEEeCCe-EEEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYD-VYEDQNG-VHLILELCSGGELFDRIVA----QERYMEVGAAAVIRQIAEGLAALH  159 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~-~~~~~~~-~~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qil~al~~lH  159 (521)
                      .|+.+|++|     +|||||++++ .|..++. ++||||||.+|+|...|..    ...++|..++.++.|+|.||..||
T Consensus        67 ~Ei~lLkQL-----~HpNIVqYy~~~f~~~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH  141 (375)
T KOG0591|consen   67 KEISLLKQL-----NHPNIVQYYAHSFIEDNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCH  141 (375)
T ss_pred             HHHHHHHhc-----CCchHHHHHHHhhhccchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHh
Confidence            999999999     9999999998 5555544 9999999999999998863    457999999999999999999999


Q ss_pred             H--CC--CeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC-CcccccCCcccccccccccCCCCchhhhHHHHHHH
Q 009980          160 Q--AN--IVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVIL  234 (521)
Q Consensus       160 ~--~~--i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il  234 (521)
                      +  ..  |+||||||.||++   +.+|.+||+|||+++...... ...+.+|||+||+||.+...+|+.++||||+||++
T Consensus       142 ~~~~r~~VmHRDIKPaNIFl---~~~gvvKLGDfGL~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCll  218 (375)
T KOG0591|consen  142 SKIPRGTVMHRDIKPANIFL---TANGVVKLGDFGLGRFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLL  218 (375)
T ss_pred             ccccccceeeccCcchheEE---cCCCceeeccchhHhHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHH
Confidence            9  44  9999999999999   889999999999999865443 34567899999999999999999999999999999


Q ss_pred             HHHHhCCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCH
Q 009980          235 YILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSA  293 (521)
Q Consensus       235 ~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~  293 (521)
                      |||+.-.+||.+.+-.+..++|.++.+++.+.  ..+|.++..+|..|+.+||..||+.
T Consensus       219 yEMcaL~~PF~g~n~~~L~~KI~qgd~~~~p~--~~YS~~l~~li~~ci~vd~~~RP~t  275 (375)
T KOG0591|consen  219 YEMCALQSPFYGDNLLSLCKKIEQGDYPPLPD--EHYSTDLRELINMCIAVDPEQRPDT  275 (375)
T ss_pred             HHHHhcCCCcccccHHHHHHHHHcCCCCCCcH--HHhhhHHHHHHHHHccCCcccCCCc
Confidence            99999999999999999999999998763321  4589999999999999999999986

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-51  Score=390.65  Aligned_cols=277  Identities=31%  Similarity=0.508  Sum_probs=233.2

Q ss_pred             cccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHH
Q 009980            4 ETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDAL   83 (521)
Q Consensus         4 ~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (521)
                      +.....++|++++.||+|.||.|.+|++..  +++.||||++.+.......+++...              .........
T Consensus        91 ~~~k~lNqy~l~~eiG~G~yGkVkLar~~~--~~~l~AiKil~K~~~~~~~~~~~~~--------------a~~~~~~ek  154 (576)
T KOG0585|consen   91 QDRKQLNQYELIKEIGSGQYGKVKLARDEV--DGKLYAIKILPKKELRRQYGFPRQP--------------AMKLMPIEK  154 (576)
T ss_pred             ccceehhheehhhhhcCCccceEEEEeecC--CCcEEEEEeechhhhhhhccccccc--------------ccccCcHHH
Confidence            455677899999999999999999999988  8899999999988766544332111              111122346


Q ss_pred             HHHHHHHHHHHhhccCCCCCccceeEEEEeC--CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Q 009980           84 LTNEILVMRKIVENVSPHPNVIDLYDVYEDQ--NGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQA  161 (521)
Q Consensus        84 ~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~--~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~  161 (521)
                      +.+||.+|+++     .|||||+|+++..++  +.+|||+|||..|.+...-.....+++.+++.+++.++.||.|||.+
T Consensus       155 v~~EIailKkl-----~H~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~Q  229 (576)
T KOG0585|consen  155 VRREIAILKKL-----HHPNVVKLIEVLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQ  229 (576)
T ss_pred             HHHHHHHHHhc-----CCcCeeEEEEeecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhc
Confidence            88999999999     999999999999776  57999999999998854322222399999999999999999999999


Q ss_pred             CCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCC------CCcccccCCcccccccccccC---CC-CchhhhHHHH
Q 009980          162 NIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYT------DPVVGLFGSIDYVSPEALLQD---RI-TSKSDMWSLG  231 (521)
Q Consensus       162 ~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~~~gt~~y~aPE~~~~~---~~-~~~~DiwslG  231 (521)
                      ||+||||||.|+|+   +.++.+||+|||.+.....+      .......|||.|+|||.+.++   .+ +.+.||||+|
T Consensus       230 giiHRDIKPsNLLl---~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalG  306 (576)
T KOG0585|consen  230 GIIHRDIKPSNLLL---SSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALG  306 (576)
T ss_pred             CeeccccchhheEE---cCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhh
Confidence            99999999999999   77899999999998754222      123446899999999999863   23 5788999999


Q ss_pred             HHHHHHHhCCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCC
Q 009980          232 VILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDS  306 (521)
Q Consensus       232 ~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~  306 (521)
                      |+||+|+.|+.||.+....+.+..|....+.++..  +.+...+++||.+||.+||++|++..++..|||+....
T Consensus       307 VTLYCllfG~~PF~~~~~~~l~~KIvn~pL~fP~~--pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~g  379 (576)
T KOG0585|consen  307 VTLYCLLFGQLPFFDDFELELFDKIVNDPLEFPEN--PEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRDG  379 (576)
T ss_pred             hhHHHhhhccCCcccchHHHHHHHHhcCcccCCCc--ccccHHHHHHHHHHhhcChhheeehhhheecceeccCC
Confidence            99999999999999999999999999999888764  46889999999999999999999999999999998664

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.9e-51  Score=399.21  Aligned_cols=257  Identities=30%  Similarity=0.492  Sum_probs=226.6

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      +-...|.....||+|+.|.||.|+...  +++.||||.+.......                            +..+.+
T Consensus       270 dP~~~y~~~~kigqgaSG~vy~A~~~~--~~~~VaiK~m~l~~Q~~----------------------------keLiln  319 (550)
T KOG0578|consen  270 DPRSKYTDFKKIGQGATGGVYVARKIS--TKQEVAIKRMDLRKQPK----------------------------KELLLN  319 (550)
T ss_pred             Chhhhhcchhhhccccccceeeeeecc--CCceEEEEEEEeccCCc----------------------------hhhhHH
Confidence            445688899999999999999999987  88899999998755432                            456899


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHR  166 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~  166 (521)
                      |+.+|+..     +|||||.+++.|.-.+.+|+||||++||+|.|.+... .++|.+++.|++.+|.||+|||.+||+||
T Consensus       320 Ei~Vm~~~-----~H~NiVnfl~Sylv~deLWVVMEym~ggsLTDvVt~~-~~~E~qIA~Icre~l~aL~fLH~~gIiHr  393 (550)
T KOG0578|consen  320 EILVMRDL-----HHPNIVNFLDSYLVGDELWVVMEYMEGGSLTDVVTKT-RMTEGQIAAICREILQGLKFLHARGIIHR  393 (550)
T ss_pred             HHHHHHhc-----cchHHHHHHHHhcccceeEEEEeecCCCchhhhhhcc-cccHHHHHHHHHHHHHHHHHHHhcceeee
Confidence            99999998     9999999999999999999999999999999988764 59999999999999999999999999999


Q ss_pred             cCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC-CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCC
Q 009980          167 DLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFI  245 (521)
Q Consensus       167 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~  245 (521)
                      |||.+|||+   ..++.+||+|||+|....... ...+.+|||+|||||++....|++++||||||+++.||+.|++||.
T Consensus       394 DIKSDnILL---~~~g~vKltDFGFcaqi~~~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYl  470 (550)
T KOG0578|consen  394 DIKSDNILL---TMDGSVKLTDFGFCAQISEEQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYL  470 (550)
T ss_pred             ccccceeEe---ccCCcEEEeeeeeeeccccccCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCcc
Confidence            999999999   778889999999998776555 4567789999999999999999999999999999999999999998


Q ss_pred             CCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCccc
Q 009980          246 AQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVI  303 (521)
Q Consensus       246 ~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~  303 (521)
                      ..+.-.-+..|... ..+....+..+|+.+++|+.+||+.||.+|+||.+||+||||+
T Consensus       471 nE~PlrAlyLIa~n-g~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~  527 (550)
T KOG0578|consen  471 NENPLRALYLIATN-GTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLK  527 (550)
T ss_pred             CCChHHHHHHHhhc-CCCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhh
Confidence            76665555444332 2333445578999999999999999999999999999999995

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=8.8e-52  Score=373.02  Aligned_cols=267  Identities=36%  Similarity=0.619  Sum_probs=234.7

Q ss_pred             ccccceeec-ccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            7 KLTDEYEVT-DILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         7 ~~~~~Y~~~-~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      .|.+-|++. +.||+|+|+.|-.|+...  ++..||||++.|...                            -.+..+.
T Consensus        74 ~F~d~YkLt~e~LGeGAyasVqtcv~i~--t~~EYAVKiidKq~g----------------------------HsR~Rvf  123 (463)
T KOG0607|consen   74 KFEDMYKLTSELLGEGAYASVQTCVSIQ--TGKEYAVKIIDKQPG----------------------------HSRSRVF  123 (463)
T ss_pred             hHHHHHHhHHHHhcCccceeeeeeeeec--cchhhhhhhhhcCCc----------------------------hHHHHHH
Confidence            466778875 689999999999999988  889999999987522                            2356688


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      +|++++.+.    ..|+||++++++|+++..+|||||-+.||+|..+|.++..|+|.++..+++.|+.||.|||.+||.|
T Consensus       124 REVe~f~~C----qgh~nilqLiefFEdd~~FYLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAH  199 (463)
T KOG0607|consen  124 REVETFYQC----QGHKNILQLIEFFEDDTRFYLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAH  199 (463)
T ss_pred             HHHHHHHHh----cCCccHHHHHHHhcccceEEEEEecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCccc
Confidence            999999887    6999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCCC--------CCCcccccCCcccccccccc-----cCCCCchhhhHHHHH
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGY--------TDPVVGLFGSIDYVSPEALL-----QDRITSKSDMWSLGV  232 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~--------~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslG~  232 (521)
                      |||||+|||....+.-..+|||||.+..-...        .....+.+|+..|||||+..     ...|+.+||.|||||
T Consensus       200 RDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGv  279 (463)
T KOG0607|consen  200 RDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGV  279 (463)
T ss_pred             ccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHH
Confidence            99999999997777778899999988643211        11234568999999999864     236899999999999


Q ss_pred             HHHHHHhCCCCCCCCC---------------cHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHH
Q 009980          233 ILYILLSGYPPFIAQS---------------NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELL  297 (521)
Q Consensus       233 il~~ll~g~~pf~~~~---------------~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l  297 (521)
                      |+|.||+|++||.+.-               ...++..|..|.+.||+..|..+|.+++++|+.+|..++.+|.++.+++
T Consensus       280 IlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vl  359 (463)
T KOG0607|consen  280 ILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVL  359 (463)
T ss_pred             HHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhcc
Confidence            9999999999996643               2356788999999999999999999999999999999999999999999


Q ss_pred             cCCcccCCCC
Q 009980          298 NHPWVIGDSA  307 (521)
Q Consensus       298 ~h~~~~~~~~  307 (521)
                      +|||+..-..
T Consensus       360 nhPw~~~~~~  369 (463)
T KOG0607|consen  360 NHPWVQRCAP  369 (463)
T ss_pred             CCccccccch
Confidence            9999986543

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=100.00  E-value=1.4e-50  Score=357.09  Aligned_cols=261  Identities=29%  Similarity=0.436  Sum_probs=225.7

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ++|...+.||+|.||+||+|++..  +|+.||||.++......                          --.-...+||.
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~--t~~~VAIKKIkl~~~kd--------------------------Gi~~talREIK   53 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTE--TGKRVAIKKIKLGNAKD--------------------------GINRTALREIK   53 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecC--CCcEEEEEEeecccccc--------------------------CccHHHHHHHH
Confidence            689999999999999999999998  89999999997653322                          11234679999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQANIVHRDL  168 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~~~i~H~dl  168 (521)
                      .|+.+     +||||+.++++|...+.+.||+||++. +|...+... ..++..+++.++.+++.||+|||++.|+||||
T Consensus        54 ~Lqel-----~h~nIi~LiD~F~~~~~l~lVfEfm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDl  127 (318)
T KOG0659|consen   54 LLQEL-----KHPNIIELIDVFPHKSNLSLVFEFMPT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDL  127 (318)
T ss_pred             HHHHc-----cCcchhhhhhhccCCCceEEEEEeccc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccC
Confidence            99999     999999999999999999999999976 898888643 46899999999999999999999999999999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCccCCCCCCc-ccccCCccccccccccc-CCCCchhhhHHHHHHHHHHHhCCCCCCC
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSSVEGYTDPV-VGLFGSIDYVSPEALLQ-DRITSKSDMWSLGVILYILLSGYPPFIA  246 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~-~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~  246 (521)
                      ||+|+|+   ++++.+||+|||+|+........ ...+.|.+|+|||.+-+ ..|+..+||||+|||+.||+-|.|.|.+
T Consensus       128 KPnNLLi---s~~g~lKiADFGLAr~f~~p~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG  204 (318)
T KOG0659|consen  128 KPNNLLI---SSDGQLKIADFGLARFFGSPNRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPG  204 (318)
T ss_pred             CccceEE---cCCCcEEeecccchhccCCCCcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCC
Confidence            9999999   88899999999999987655443 23368999999998765 5799999999999999999999999999


Q ss_pred             CCcHHHHHHHHcCCCCCchhhhh------------------------ccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcc
Q 009980          247 QSNRQKQQMIMAGEFSFYEQTWK------------------------NISSSAKQLISSLLTVDPNRRPSAQELLNHPWV  302 (521)
Q Consensus       247 ~~~~~~~~~i~~~~~~~~~~~~~------------------------~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~  302 (521)
                      .++-+.+..|.+...++....|+                        ..++++.+|+.+||..||.+|+|+.|+|+|+||
T Consensus       205 ~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf  284 (318)
T KOG0659|consen  205 DSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYF  284 (318)
T ss_pred             CchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhh
Confidence            99988888887655544444443                        356788999999999999999999999999999


Q ss_pred             cCCCC
Q 009980          303 IGDSA  307 (521)
Q Consensus       303 ~~~~~  307 (521)
                      +..+.
T Consensus       285 ~~~P~  289 (318)
T KOG0659|consen  285 KSLPL  289 (318)
T ss_pred             hcCCC
Confidence            86443

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=8.8e-51  Score=388.12  Aligned_cols=263  Identities=26%  Similarity=0.428  Sum_probs=228.0

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      .-.+.|+.++.||+|.||.||+|++..  +|+.||+|.++.......                          .-....+
T Consensus       114 r~~~~feki~kIGeGTyg~VYkAr~~~--tgkivALKKvr~d~~~~~--------------------------~~~t~~R  165 (560)
T KOG0600|consen  114 RRADSFEKIEKIGEGTYGQVYKARDLE--TGKIVALKKVRFDNEKEG--------------------------FPITAIR  165 (560)
T ss_pred             cchHHHHHHHHhcCcchhheeEeeecc--cCcEEEEEEeecccCCCc--------------------------chHHHHH
Confidence            446789999999999999999999998  899999999986553321                          1234678


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeC--CeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQ--NGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQANI  163 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~--~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~~~i  163 (521)
                      ||.+|++|     +||||+++.+...+.  ..+|||+|||+. +|.-++... -.|++.+++.+++||+.||.|||++||
T Consensus       166 EI~ILr~l-----~HpNIikL~eivt~~~~~siYlVFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gv  239 (560)
T KOG0600|consen  166 EIKILRRL-----DHPNIIKLEEIVTSKLSGSIYLVFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGV  239 (560)
T ss_pred             HHHHHHhc-----CCCcccceeeEEEecCCceEEEEEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCe
Confidence            99999999     999999999999877  689999999987 787777653 479999999999999999999999999


Q ss_pred             eeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC--CcccccCCcccccccccccC-CCCchhhhHHHHHHHHHHHhC
Q 009980          164 VHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD--PVVGLFGSIDYVSPEALLQD-RITSKSDMWSLGVILYILLSG  240 (521)
Q Consensus       164 ~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~~ll~g  240 (521)
                      +|||||..|||+   +.++.+||+|||+|+......  ..+..+.|++|+|||++.+. .|+.++|+||+||||.||++|
T Consensus       240 lHRDIK~SNiLi---dn~G~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~g  316 (560)
T KOG0600|consen  240 LHRDIKGSNILI---DNNGVLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLG  316 (560)
T ss_pred             eeccccccceEE---cCCCCEEeccccceeeccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcC
Confidence            999999999999   899999999999999665443  56777889999999999865 699999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHHcCCCCCchhhhh-------------------------ccCHHHHHHHHHhccCCCCCCCCHHH
Q 009980          241 YPPFIAQSNRQKQQMIMAGEFSFYEQTWK-------------------------NISSSAKQLISSLLTVDPNRRPSAQE  295 (521)
Q Consensus       241 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~-------------------------~~s~~~~~li~~~l~~dp~~R~t~~~  295 (521)
                      ++.|.+.++-+.+..|.+-...+....|+                         .+|..+.+|+..||..||.+|.||.+
T Consensus       317 kPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~  396 (560)
T KOG0600|consen  317 KPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASS  396 (560)
T ss_pred             CCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHH
Confidence            99999999999988887655544444443                         36788899999999999999999999


Q ss_pred             HHcCCcccCCC
Q 009980          296 LLNHPWVIGDS  306 (521)
Q Consensus       296 ~l~h~~~~~~~  306 (521)
                      +|+|+||....
T Consensus       397 aL~seyF~t~p  407 (560)
T KOG0600|consen  397 ALQSEYFTTEP  407 (560)
T ss_pred             HhcCcccccCC
Confidence            99999995433

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.8e-50  Score=398.63  Aligned_cols=262  Identities=26%  Similarity=0.443  Sum_probs=233.3

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      .-.++|.+.++||+|+||+|++|..+.  +++.||||+++|......                         .+-.....
T Consensus       365 ~~l~~F~~l~vLGkGsFGkV~lae~k~--~~e~yAIK~LKK~~Il~~-------------------------d~Ve~~~~  417 (694)
T KOG0694|consen  365 LTLDDFRLLAVLGRGSFGKVLLAELKG--TNEYYAIKVLKKGDILQR-------------------------DEVESLMC  417 (694)
T ss_pred             ccccceEEEEEeccCcCceEEEEEEcC--CCcEEEEEEeeccceecc-------------------------ccHHHHHH
Confidence            446789999999999999999999998  888999999998765432                         12234667


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHR  166 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~  166 (521)
                      |.+++...    .+||.++.++..|++.+++|+||||+.||++ -++...+.|+|..++.++..|+.||.|||++||++|
T Consensus       418 EkrI~~la----~~HPFL~~L~~~fQT~~~l~fvmey~~Ggdm-~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYR  492 (694)
T KOG0694|consen  418 EKRIFELA----NRHPFLVNLFSCFQTKEHLFFVMEYVAGGDL-MHHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYR  492 (694)
T ss_pred             HHHHHHHh----ccCCeEeecccccccCCeEEEEEEecCCCcE-EEEEecccccHHHHHHHHHHHHHHHHHHHhcCceee
Confidence            77777665    3799999999999999999999999999994 345556789999999999999999999999999999


Q ss_pred             cCCCCcEEEeeCCCCCCEEEeecCCCccCC-CCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCC
Q 009980          167 DLKPENCLFLNDREDSPLKIMDFGLSSVEG-YTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFI  245 (521)
Q Consensus       167 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~  245 (521)
                      |||.+|||+   +..|.+||+|||+++..- ......+.||||.|||||++.+..|+..+|.|||||++|+||.|..||.
T Consensus       493 DlKLdNiLL---D~eGh~kiADFGlcKe~m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~  569 (694)
T KOG0694|consen  493 DLKLDNLLL---DTEGHVKIADFGLCKEGMGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFP  569 (694)
T ss_pred             ecchhheEE---cccCcEEecccccccccCCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCC
Confidence            999999999   999999999999998643 5566778899999999999999999999999999999999999999999


Q ss_pred             CCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCC-----HHHHHcCCcccCCCC
Q 009980          246 AQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPS-----AQELLNHPWVIGDSA  307 (521)
Q Consensus       246 ~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t-----~~~~l~h~~~~~~~~  307 (521)
                      +.+++++...|......+|    ..+|.++.++++++|.+||++|..     +.++..||||.....
T Consensus       570 gddEee~FdsI~~d~~~yP----~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~w  632 (694)
T KOG0694|consen  570 GDDEEEVFDSIVNDEVRYP----RFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSIDW  632 (694)
T ss_pred             CCCHHHHHHHHhcCCCCCC----CcccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCCH
Confidence            9999999999999988776    568999999999999999999975     588999999986543

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.8e-50  Score=381.67  Aligned_cols=259  Identities=29%  Similarity=0.501  Sum_probs=216.2

Q ss_pred             ccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEI   88 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   88 (521)
                      ..+|..++.||+|+||.||++.+++  ++...|||.+.....                            .....+.+|+
T Consensus        16 ~~~~~~~~~lG~Gs~G~V~l~~~~~--~g~~~AvK~v~~~~~----------------------------~~~~~l~~Ei   65 (313)
T KOG0198|consen   16 ISNWSKGKLLGRGSFGSVYLATNKK--TGELMAVKSVELEDS----------------------------PTSESLEREI   65 (313)
T ss_pred             cchhhhhccccCccceEEEEEEecC--CCcceeeeeeecccc----------------------------hhHHHHHHHH
Confidence            3568889999999999999999998  688999999865311                            0134588999


Q ss_pred             HHHHHHhhccCCCCCccceeEEEEeCC--eEEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           89 LVMRKIVENVSPHPNVIDLYDVYEDQN--GVHLILELCSGGELFDRIVAQE-RYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        89 ~~l~~l~~~~~~hpniv~~~~~~~~~~--~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      .+|.++     +|||||++++......  .++|+|||++||+|.+++...+ .++|..++.+.+||+.||.|||++||+|
T Consensus        66 ~iL~~l-----~~p~IV~~~G~~~~~~~~~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH  140 (313)
T KOG0198|consen   66 RILSRL-----NHPNIVQYYGSSSSRENDEYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVH  140 (313)
T ss_pred             HHHHhC-----CCCCEEeeCCccccccCeeeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEec
Confidence            999999     8999999999855544  6999999999999999999877 7999999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCC-CCCEEEeecCCCccCCC----CCCcccccCCcccccccccccCC-CCchhhhHHHHHHHHHHHh
Q 009980          166 RDLKPENCLFLNDRE-DSPLKIMDFGLSSVEGY----TDPVVGLFGSIDYVSPEALLQDR-ITSKSDMWSLGVILYILLS  239 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~-~~~~kl~Dfg~a~~~~~----~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~~ll~  239 (521)
                      |||||+|||+   +. ++.+||+|||+++....    ........|||.|||||++..+. ..+++||||+||++.||+|
T Consensus       141 ~DiK~~NiLl---~~~~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~T  217 (313)
T KOG0198|consen  141 CDIKPANILL---DPSNGDVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLT  217 (313)
T ss_pred             cCcccceEEE---eCCCCeEEeccCccccccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccC
Confidence            9999999999   66 68999999999986553    12234567999999999998532 3359999999999999999


Q ss_pred             CCCCCCC-CCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCCC
Q 009980          240 GYPPFIA-QSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSA  307 (521)
Q Consensus       240 g~~pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~~  307 (521)
                      |++||.. ....+..-.+......+  ..+..+|.++++||.+|+..||.+||||.++|+|||+.+...
T Consensus       218 g~~PW~~~~~~~~~~~~ig~~~~~P--~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~~  284 (313)
T KOG0198|consen  218 GKPPWSEFFEEAEALLLIGREDSLP--EIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNSI  284 (313)
T ss_pred             CCCcchhhcchHHHHHHHhccCCCC--CCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhcccc
Confidence            9999987 34444444444443211  334669999999999999999999999999999999976543

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=100.00  E-value=4.9e-50  Score=364.23  Aligned_cols=264  Identities=29%  Similarity=0.454  Sum_probs=224.4

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      +-.+.|+.+..|++|+||.||+|+++.  +++.||+|.++...-..  |+|                        -...+
T Consensus        73 rsv~efe~lnrI~EGtyGiVYRakdk~--t~eIVALKr~kmekek~--GFP------------------------ItsLR  124 (419)
T KOG0663|consen   73 RSVEEFEKLNRIEEGTYGVVYRAKDKK--TDEIVALKRLKMEKEKE--GFP------------------------ITSLR  124 (419)
T ss_pred             ccHHHHHHHhhcccCcceeEEEeccCC--cceeEEeeecccccccC--CCc------------------------chhHH
Confidence            345789999999999999999999998  89999999997654322  221                        12578


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeC--CeEEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCC
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQ--NGVHLILELCSGGELFDRIVAQE-RYMEVGAAAVIRQIAEGLAALHQANI  163 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~--~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qil~al~~lH~~~i  163 (521)
                      ||.+|.++     +|||||.+-++....  +.+|||||||+. +|..++..-+ +|+..+++.++.|++.|++|||.+.|
T Consensus       125 EIniLl~~-----~H~NIV~vkEVVvG~~~d~iy~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wi  198 (419)
T KOG0663|consen  125 EINILLKA-----RHPNIVEVKEVVVGSNMDKIYIVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWI  198 (419)
T ss_pred             HHHHHHhc-----CCCCeeeeEEEEeccccceeeeeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhcee
Confidence            99999998     999999999998654  579999999977 8888887755 89999999999999999999999999


Q ss_pred             eeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCC-CCcccccCCcccccccccccC-CCCchhhhHHHHHHHHHHHhCC
Q 009980          164 VHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYT-DPVVGLFGSIDYVSPEALLQD-RITSKSDMWSLGVILYILLSGY  241 (521)
Q Consensus       164 ~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~~ll~g~  241 (521)
                      +||||||+|+|+   ...|.+||+|||+|+.++.+ .+.+..+.|.+|+|||.+.+. .|+.++|+||+|||+.+|++++
T Consensus       199 lHRDLK~SNLLm---~~~G~lKiaDFGLAR~ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~k  275 (419)
T KOG0663|consen  199 LHRDLKTSNLLL---SHKGILKIADFGLAREYGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQK  275 (419)
T ss_pred             Eecccchhheee---ccCCcEEecccchhhhhcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcC
Confidence            999999999999   77889999999999987644 346677889999999999865 5899999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHHcCCCCCchhhhh----------------------------ccCHHHHHHHHHhccCCCCCCCCH
Q 009980          242 PPFIAQSNRQKQQMIMAGEFSFYEQTWK----------------------------NISSSAKQLISSLLTVDPNRRPSA  293 (521)
Q Consensus       242 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~----------------------------~~s~~~~~li~~~l~~dp~~R~t~  293 (521)
                      |.|.+.+..+.+..|..-...+....|+                            .+|....+|+..+|..||.+|.||
T Consensus       276 Plf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA  355 (419)
T KOG0663|consen  276 PLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITA  355 (419)
T ss_pred             CCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccH
Confidence            9999999988888776533322222221                            145788999999999999999999


Q ss_pred             HHHHcCCcccCCCC
Q 009980          294 QELLNHPWVIGDSA  307 (521)
Q Consensus       294 ~~~l~h~~~~~~~~  307 (521)
                      +++|+|+||...+.
T Consensus       356 ~~~L~h~~F~e~P~  369 (419)
T KOG0663|consen  356 EDGLKHEYFRETPL  369 (419)
T ss_pred             HHhhcccccccCCC
Confidence            99999999987543

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-49  Score=379.20  Aligned_cols=263  Identities=35%  Similarity=0.608  Sum_probs=242.9

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      ..|.+=|.+.+.||+|-|++|.+|+|--  +|..||||++.+.....                          .....+.
T Consensus        14 gkIAGLYDLekTlG~GHFAVVKLArHVF--TGekVAVKviDKTKlD~--------------------------~st~hlf   65 (864)
T KOG4717|consen   14 GKIAGLYDLEKTLGRGHFAVVKLARHVF--TGEKVAVKVIDKTKLDT--------------------------LSTGHLF   65 (864)
T ss_pred             cceeeeehhhhhhcCCceehhhhhhhhc--ccceeEEEEecccccch--------------------------hhhhHHH
Confidence            4577889999999999999999999998  88999999999876643                          4456688


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQANIV  164 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~~~i~  164 (521)
                      +|++-|+-+     .|||||++|++......+|||+|+-+||+|+|+|.+. ..++|..+++++.||+.|+.|||+..+|
T Consensus        66 qEVRCMKLV-----QHpNiVRLYEViDTQTKlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVV  140 (864)
T KOG4717|consen   66 QEVRCMKLV-----QHPNIVRLYEVIDTQTKLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVV  140 (864)
T ss_pred             HHHHHHHHh-----cCcCeeeeeehhcccceEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhh
Confidence            999999888     9999999999999999999999999999999999875 4699999999999999999999999999


Q ss_pred             eccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCC-chhhhHHHHHHHHHHHhCCCC
Q 009980          165 HRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRIT-SKSDMWSLGVILYILLSGYPP  243 (521)
Q Consensus       165 H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwslG~il~~ll~g~~p  243 (521)
                      ||||||+|+.+.  ..-|.|||+|||++....+.....+.||++.|-|||++.+..|+ +++||||||||||.|++|++|
T Consensus       141 HRDLKPENVVFF--EKlGlVKLTDFGFSNkf~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~P  218 (864)
T KOG4717|consen  141 HRDLKPENVVFF--EKLGLVKLTDFGFSNKFQPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPP  218 (864)
T ss_pred             cccCCcceeEEe--eecCceEeeeccccccCCCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCc
Confidence            999999999884  46789999999999998888899999999999999999999997 688999999999999999999


Q ss_pred             CCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCCC
Q 009980          244 FIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSA  307 (521)
Q Consensus       244 f~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~~  307 (521)
                      |...++.+.+..|+...+..|    ..+|.++++||.+||..||.+|.|.++|..|+|++....
T Consensus       219 FqeANDSETLTmImDCKYtvP----shvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D~  278 (864)
T KOG4717|consen  219 FQEANDSETLTMIMDCKYTVP----SHVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGDR  278 (864)
T ss_pred             cccccchhhhhhhhcccccCc----hhhhHHHHHHHHHHHhcCchhhccHHHHhccccccCCCC
Confidence            999999999999999999887    458999999999999999999999999999999986543

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.3e-49  Score=371.93  Aligned_cols=264  Identities=26%  Similarity=0.408  Sum_probs=228.9

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      ..-.++|++...||.|..++||+|++..  ++..||||+++......                           .-+.+.
T Consensus        22 p~n~~~YeL~e~IG~G~sa~V~~A~c~p--~~e~VAIK~inLEkc~~---------------------------~ld~l~   72 (516)
T KOG0582|consen   22 PLNAKDYELQEVIGVGASAVVYLARCIP--TNEVVAIKIINLEKCNN---------------------------DLDALR   72 (516)
T ss_pred             CCCccceeEEEEEeccceeEeeeeeecc--cCCEEEEEEeehhhhhh---------------------------hHHHHH
Confidence            3446799999999999999999999998  78999999998655432                           235689


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ--ERYMEVGAAAVIRQIAEGLAALHQANI  163 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~al~~lH~~~i  163 (521)
                      +|+..|..+     +||||++++..|..++.+|+||.||.+|++++.+...  ..++|..++.|+++++.||.|||.+|.
T Consensus        73 kE~~~msl~-----~HPNIv~~~~sFvv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~  147 (516)
T KOG0582|consen   73 KEVQTMSLI-----DHPNIVTYHCSFVVDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGH  147 (516)
T ss_pred             HHHHHhhhc-----CCCCcceEEEEEEecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCc
Confidence            999999998     9999999999999999999999999999999999764  349999999999999999999999999


Q ss_pred             eeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC-C----cccccCCccccccccccc--CCCCchhhhHHHHHHHHH
Q 009980          164 VHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD-P----VVGLFGSIDYVSPEALLQ--DRITSKSDMWSLGVILYI  236 (521)
Q Consensus       164 ~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~----~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~~  236 (521)
                      +|||||+.|||+   +.+|.|||+|||.+.....+. .    .....|||+|||||++..  ..|+.|+||||+|++..|
T Consensus       148 IHRdvKAgnILi---~~dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~E  224 (516)
T KOG0582|consen  148 IHRDVKAGNILI---DSDGTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACE  224 (516)
T ss_pred             eecccccccEEE---cCCCcEEEcCceeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHH
Confidence            999999999999   889999999999875432221 1    144579999999999543  479999999999999999


Q ss_pred             HHhCCCCCCCCCcHHHHHHHHcCCCCC------chhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCC
Q 009980          237 LLSGYPPFIAQSNRQKQQMIMAGEFSF------YEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDS  306 (521)
Q Consensus       237 ll~g~~pf~~~~~~~~~~~i~~~~~~~------~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~  306 (521)
                      |.+|..||....+.+++-...++.++.      +....+..+..++.+|..||..||.+||||+++|+|+||+.-.
T Consensus       225 LA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~k  300 (516)
T KOG0582|consen  225 LAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKAK  300 (516)
T ss_pred             HhcCCCCcccCChHHHHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhcc
Confidence            999999999988888887777777642      2334456888999999999999999999999999999998543

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.1e-49  Score=365.76  Aligned_cols=265  Identities=30%  Similarity=0.460  Sum_probs=222.6

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      -.+...|...+.||.|+||.|+.|.++.  ++..||||.+...-                          +.........
T Consensus        18 ~~i~~~y~~~~~iG~GAyGvVcsA~~~~--t~~~VAIKKi~~~F--------------------------~~~~~akRtl   69 (359)
T KOG0660|consen   18 FEIPRYYVLIEPIGRGAYGVVCSAKDKR--TGEKVAIKKILNPF--------------------------ENQIDAKRTL   69 (359)
T ss_pred             EeccceecccccccCcceeeEEEEEEcC--CCCEeehhhhhhhh--------------------------hchHHHHHHH
Confidence            3456677778999999999999999998  78999999986321                          1123455678


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEe-----CCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYED-----QNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ  160 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~-----~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~  160 (521)
                      +|+.+|+.+     +|+||+.+.+++..     -+.+|+|+|++ +-+|...+..+..+++..+..++.||+.||+|+|+
T Consensus        70 RElklLr~~-----~HeNIi~l~di~~p~~~~~f~DvYiV~elM-etDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHS  143 (359)
T KOG0660|consen   70 RELKLLRHL-----RHENIIGLLDIFRPPSRDKFNDVYLVFELM-ETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHS  143 (359)
T ss_pred             HHHHHHHHh-----cCCCcceEEeecccccccccceeEEehhHH-hhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhc
Confidence            999999999     99999999999865     35799999999 55899888888889999999999999999999999


Q ss_pred             CCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCC---CCCcccccCCcccccccccc-cCCCCchhhhHHHHHHHHH
Q 009980          161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGY---TDPVVGLFGSIDYVSPEALL-QDRITSKSDMWSLGVILYI  236 (521)
Q Consensus       161 ~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~~  236 (521)
                      .+|+||||||.|+++   +.+..+||+|||+|+....   ....+..+.|.+|.|||++. ...|+.+.||||+|||+.|
T Consensus       144 AnViHRDLKPsNll~---n~~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AE  220 (359)
T KOG0660|consen  144 ANVIHRDLKPSNLLL---NADCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAE  220 (359)
T ss_pred             ccccccccchhheee---ccCCCEEeccccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHH
Confidence            999999999999999   8888899999999998753   34456778899999999886 4579999999999999999


Q ss_pred             HHhCCCCCCCCCcHHHHHHHHcCC-----------------------CCCc----hhhhhccCHHHHHHHHHhccCCCCC
Q 009980          237 LLSGYPPFIAQSNRQKQQMIMAGE-----------------------FSFY----EQTWKNISSSAKQLISSLLTVDPNR  289 (521)
Q Consensus       237 ll~g~~pf~~~~~~~~~~~i~~~~-----------------------~~~~----~~~~~~~s~~~~~li~~~l~~dp~~  289 (521)
                      |++|++.|.|.+.-..+..|..-.                       ...+    ...+++.++.+.+|+.+||..||.+
T Consensus       221 mL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~k  300 (359)
T KOG0660|consen  221 MLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKK  300 (359)
T ss_pred             HHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccc
Confidence            999999999887655544443211                       1111    2345678999999999999999999


Q ss_pred             CCCHHHHHcCCcccCCCC
Q 009980          290 RPSAQELLNHPWVIGDSA  307 (521)
Q Consensus       290 R~t~~~~l~h~~~~~~~~  307 (521)
                      |+|++|+|.|||+.....
T Consensus       301 Rita~eAL~hPYl~~~hd  318 (359)
T KOG0660|consen  301 RITAEEALAHPYLAPYHD  318 (359)
T ss_pred             cCCHHHHhcChhhhhhcC
Confidence            999999999999986443

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-50  Score=381.71  Aligned_cols=257  Identities=27%  Similarity=0.450  Sum_probs=225.7

Q ss_pred             cccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      -...|+..+.||+|+||.||+|.+..  +++.||||++......                           .....+++|
T Consensus        11 ~~~~~~~~~~IgrGsfG~Vyk~~d~~--t~k~vAiKii~Le~~~---------------------------deIediqqe   61 (467)
T KOG0201|consen   11 PELLYTKLELIGRGSFGEVYKAIDNK--TKKVVAIKIIDLEEAE---------------------------DEIEDIQQE   61 (467)
T ss_pred             cccccccchhccccccceeeeeeecc--ccceEEEEEechhhcc---------------------------hhhHHHHHH
Confidence            34578888999999999999999998  8899999999754332                           223458899


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecc
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRD  167 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~d  167 (521)
                      +.++.++     ++|||.++|+.|..+..++++||||.||++.+.+.....+.|.++..++++++.||.|||+++.+|||
T Consensus        62 i~~Ls~~-----~~~~it~yygsyl~g~~LwiiMey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrD  136 (467)
T KOG0201|consen   62 ISVLSQC-----DSPNITEYYGSYLKGTKLWIIMEYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRD  136 (467)
T ss_pred             HHHHHhc-----CcchHHhhhhheeecccHHHHHHHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceeccc
Confidence            9999998     99999999999999999999999999999999999888889999999999999999999999999999


Q ss_pred             CCCCcEEEeeCCCCCCEEEeecCCCccCCCCC-CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCC
Q 009980          168 LKPENCLFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIA  246 (521)
Q Consensus       168 lkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~  246 (521)
                      ||+.||++   ...+.+||+|||.+....... ...+.+|||+|||||++.+..|+.++||||||++.+||++|.||+..
T Consensus       137 IKaanil~---s~~g~vkl~DfgVa~ql~~~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~  213 (467)
T KOG0201|consen  137 IKAANILL---SESGDVKLADFGVAGQLTNTVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSK  213 (467)
T ss_pred             ccccceeE---eccCcEEEEecceeeeeechhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcc
Confidence            99999999   556899999999997654433 23677899999999999988999999999999999999999999988


Q ss_pred             CCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccC
Q 009980          247 QSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIG  304 (521)
Q Consensus       247 ~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~  304 (521)
                      ..+......|.+..++...   ..+|+.+++||..||.+||+.||||.++|+|+|++.
T Consensus       214 ~hPmrvlflIpk~~PP~L~---~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~  268 (467)
T KOG0201|consen  214 LHPMRVLFLIPKSAPPRLD---GDFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKR  268 (467)
T ss_pred             cCcceEEEeccCCCCCccc---cccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHh
Confidence            8776555555444433222   368999999999999999999999999999999987

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.8e-49  Score=381.97  Aligned_cols=254  Identities=30%  Similarity=0.505  Sum_probs=225.3

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ++|++.+.||+|+||.||+|.++.  +++.||||++.......                         ......+.+|+.
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~--~~~~~aiK~~~~~~~~~-------------------------~~~~~~~~~E~~   53 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRI--SEHYYALKVMAIPEVIR-------------------------LKQEQHVHNEKR   53 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcC--CCCEEEEEEEEHHHHhh-------------------------hHHHHHHHHHHH
Confidence            479999999999999999999987  78899999986532111                         012345788999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCC
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLK  169 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlk  169 (521)
                      +++++     +||||+++++++.+.+.+|+||||+.||+|.+++...+.+++..+..++.||+.||.|||++||+|||||
T Consensus        54 ~l~~l-----~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlk  128 (291)
T cd05612          54 VLKEV-----SHPFIIRLFWTEHDQRFLYMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLK  128 (291)
T ss_pred             HHHhC-----CCCcHhhhHhhhccCCeEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCC
Confidence            99998     9999999999999999999999999999999999988899999999999999999999999999999999


Q ss_pred             CCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCc
Q 009980          170 PENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSN  249 (521)
Q Consensus       170 p~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~  249 (521)
                      |+||++   +.++.+||+|||++.....  .....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+.
T Consensus       129 p~NIli---~~~~~~kl~Dfg~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~  203 (291)
T cd05612         129 PENILL---DKEGHIKLTDFGFAKKLRD--RTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNP  203 (291)
T ss_pred             HHHeEE---CCCCCEEEEecCcchhccC--CcccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence            999999   6778999999999976532  22345799999999999988899999999999999999999999999888


Q ss_pred             HHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCC-----HHHHHcCCcccC
Q 009980          250 RQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPS-----AQELLNHPWVIG  304 (521)
Q Consensus       250 ~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t-----~~~~l~h~~~~~  304 (521)
                      .+....+..+...++    ..+++.+++||.+||..||.+||+     ++++++||||..
T Consensus       204 ~~~~~~i~~~~~~~~----~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~  259 (291)
T cd05612         204 FGIYEKILAGKLEFP----RHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKS  259 (291)
T ss_pred             HHHHHHHHhCCcCCC----ccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccC
Confidence            888888888876655    346899999999999999999995     999999999975

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=100.00  E-value=9.9e-49  Score=386.82  Aligned_cols=259  Identities=28%  Similarity=0.505  Sum_probs=228.3

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      ..-.++|++.+.||+|+||.||+|+++.  +++.||||++.+.....                         ......+.
T Consensus        14 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~--~~~~~aiK~~~~~~~~~-------------------------~~~~~~~~   66 (329)
T PTZ00263         14 SWKLSDFEMGETLGTGSFGRVRIAKHKG--TGEYYAIKCLKKREILK-------------------------MKQVQHVA   66 (329)
T ss_pred             CCCchheEEEEEEEecCCeEEEEEEECC--CCCEEEEEEEEHHHHhh-------------------------hhhHHHHH
Confidence            3345899999999999999999999987  78899999997532211                         01234578


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      +|+.+++++     +||||+++++++.+++.+|+||||+.||+|.+++...+.+++..+..++.||+.||.|||++||+|
T Consensus        67 ~E~~~l~~l-----~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH  141 (329)
T PTZ00263         67 QEKSILMEL-----SHPFIVNMMCSFQDENRVYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIY  141 (329)
T ss_pred             HHHHHHHhC-----CCCCCCcEEEEEEcCCEEEEEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence            899999998     999999999999999999999999999999999999889999999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCC
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFI  245 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~  245 (521)
                      |||||+|||+   +.++.+||+|||++......  ....+||+.|+|||++.+..++.++|||||||++|+|++|..||.
T Consensus       142 ~dlkp~NIll---~~~~~~kl~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~  216 (329)
T PTZ00263        142 RDLKPENLLL---DNKGHVKVTDFGFAKKVPDR--TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFF  216 (329)
T ss_pred             cCCCHHHEEE---CCCCCEEEeeccCceEcCCC--cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCC
Confidence            9999999999   77889999999999865432  234579999999999999899999999999999999999999999


Q ss_pred             CCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCC-----HHHHHcCCcccCC
Q 009980          246 AQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPS-----AQELLNHPWVIGD  305 (521)
Q Consensus       246 ~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t-----~~~~l~h~~~~~~  305 (521)
                      +.+..+....+..+...++    ..++..+++||.+||..||.+||+     ++++++||||.+.
T Consensus       217 ~~~~~~~~~~i~~~~~~~p----~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~  277 (329)
T PTZ00263        217 DDTPFRIYEKILAGRLKFP----NWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGA  277 (329)
T ss_pred             CCCHHHHHHHHhcCCcCCC----CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCC
Confidence            8888888888888776554    347899999999999999999997     7999999999753

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=8.9e-49  Score=366.12  Aligned_cols=264  Identities=29%  Similarity=0.439  Sum_probs=230.4

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      .-.++|++++.||+|.-|+||+|+.+.  ++..+|+|++.+......                         ..-...+.
T Consensus        74 l~l~~f~llk~LG~GdiG~VyL~~l~~--t~~~fAmKVmdK~~l~~r-------------------------kKl~Ra~t  126 (459)
T KOG0610|consen   74 LGLRHFRLLKRLGCGDIGTVYLVELRG--TNCLFAMKVMDKESLASR-------------------------KKLKRAQT  126 (459)
T ss_pred             cCHHHHHHHHHcCCCCceeEEEEEecC--CCceEEEEEecHHHHhhh-------------------------hHHHHHHH
Confidence            345678899999999999999999987  778999999987654321                         11223556


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ--ERYMEVGAAAVIRQIAEGLAALHQANIV  164 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~al~~lH~~~i~  164 (521)
                      |-.||..+     +||.++.+|..|+.++..|+|||||+||+|..+.+++  +.+++..++.++..++.||.|||..|||
T Consensus       127 E~eIL~~l-----DHPFlPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGiv  201 (459)
T KOG0610|consen  127 EREILSLL-----DHPFLPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIV  201 (459)
T ss_pred             HHHHHHhc-----CCCccchhhheeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhcee
Confidence            77888887     9999999999999999999999999999999888765  4699999999999999999999999999


Q ss_pred             eccCCCCcEEEeeCCCCCCEEEeecCCCccCCC---------------------------------C-C-----------
Q 009980          165 HRDLKPENCLFLNDREDSPLKIMDFGLSSVEGY---------------------------------T-D-----------  199 (521)
Q Consensus       165 H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~---------------------------------~-~-----------  199 (521)
                      +|||||+|||+   .++|.+.|+||.++.....                                 . .           
T Consensus       202 YRDLKPENILv---redGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~  278 (459)
T KOG0610|consen  202 YRDLKPENILV---REDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASR  278 (459)
T ss_pred             eccCCcceeEE---ecCCcEEeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccc
Confidence            99999999999   8899999999988642100                                 0 0           


Q ss_pred             ------------CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHcCCCCCchhh
Q 009980          200 ------------PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQT  267 (521)
Q Consensus       200 ------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  267 (521)
                                  ...+.+||-.|+|||++.+...+.++|+|+|||++|||+.|..||.+.+..+.+.+|......++...
T Consensus       279 ~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~  358 (459)
T KOG0610|consen  279 SLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEP  358 (459)
T ss_pred             cchhhhcCCCCccccccccccccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCC
Confidence                        01235699999999999999999999999999999999999999999999999999999999888753


Q ss_pred             hhccCHHHHHHHHHhccCCCCCCCC----HHHHHcCCcccCCCC
Q 009980          268 WKNISSSAKQLISSLLTVDPNRRPS----AQELLNHPWVIGDSA  307 (521)
Q Consensus       268 ~~~~s~~~~~li~~~l~~dp~~R~t----~~~~l~h~~~~~~~~  307 (521)
                        .+|..++|||+++|.+||.+|..    |.+|-+||||.+-.+
T Consensus       359 --~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnW  400 (459)
T KOG0610|consen  359 --EVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGVNW  400 (459)
T ss_pred             --cchhHHHHHHHHHhccChhhhhccccchHHhhcCccccCCCh
Confidence              78999999999999999999998    999999999987654

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=100.00  E-value=2.2e-48  Score=389.75  Aligned_cols=261  Identities=26%  Similarity=0.459  Sum_probs=220.8

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ++|++.+.||+|+||+||+|+++.  +++.||||++.+.....                         ......+.+|+.
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~--~~~~~aiK~~~~~~~~~-------------------------~~~~~~~~~E~~   53 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKD--TGHVYAMKILRKADMLE-------------------------KEQVGHIRAERD   53 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECC--CCCEEEEEEEEHHHHHH-------------------------hhHHHHHHHHHH
Confidence            579999999999999999999987  78899999997532211                         012245778999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCC
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLK  169 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlk  169 (521)
                      ++.++     +||||+++++.+.+...+|+|||||+||+|.+++...+.+++..++.++.|++.||.|||++||+|||||
T Consensus        54 il~~~-----~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlK  128 (363)
T cd05628          54 ILVEA-----DSLWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIK  128 (363)
T ss_pred             HHHhC-----CCCCcceEEEEEecCCeEEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCC
Confidence            99888     9999999999999999999999999999999999988899999999999999999999999999999999


Q ss_pred             CCcEEEeeCCCCCCEEEeecCCCccCCCCC------------------------------------CcccccCCcccccc
Q 009980          170 PENCLFLNDREDSPLKIMDFGLSSVEGYTD------------------------------------PVVGLFGSIDYVSP  213 (521)
Q Consensus       170 p~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~------------------------------------~~~~~~gt~~y~aP  213 (521)
                      |+|||+   +.++.+||+|||+|+......                                    .....+||+.|+||
T Consensus       129 p~NILi---~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aP  205 (363)
T cd05628         129 PDNLLL---DSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAP  205 (363)
T ss_pred             HHHeEE---CCCCCEEEeeccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCH
Confidence            999999   778899999999987532110                                    01235799999999


Q ss_pred             cccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCC---CC
Q 009980          214 EALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPN---RR  290 (521)
Q Consensus       214 E~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~---~R  290 (521)
                      |++.+..++.++|||||||++|+|++|.+||.+.+..+....+.........+....++++++++|.+|+. +|.   .|
T Consensus       206 E~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~~~~r~~r  284 (363)
T cd05628         206 EVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCC-EWEHRIGA  284 (363)
T ss_pred             HHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcC-ChhhcCCC
Confidence            99999999999999999999999999999999988888888887644332222234589999999999875 444   45


Q ss_pred             CCHHHHHcCCcccCCC
Q 009980          291 PSAQELLNHPWVIGDS  306 (521)
Q Consensus       291 ~t~~~~l~h~~~~~~~  306 (521)
                      |+++++++||||.+..
T Consensus       285 ~~~~ei~~hp~f~~~~  300 (363)
T cd05628         285 PGVEEIKTNPFFEGVD  300 (363)
T ss_pred             CCHHHHhCCCCCCCCC
Confidence            8999999999998643

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=100.00  E-value=2e-48  Score=383.73  Aligned_cols=251  Identities=28%  Similarity=0.456  Sum_probs=219.9

Q ss_pred             ccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHHh
Q 009980           16 DILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIV   95 (521)
Q Consensus        16 ~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~   95 (521)
                      +.||+|+||.||+|+++.  +++.||||++.+.....                         ......+.+|+.+++++ 
T Consensus         1 ~~lG~G~~g~Vy~~~~~~--~~~~~aiK~~~~~~~~~-------------------------~~~~~~~~~e~~~l~~l-   52 (323)
T cd05571           1 KLLGKGTFGKVILVREKA--TGKYYAMKILKKEVIIA-------------------------KDEVAHTLTESRVLQNT-   52 (323)
T ss_pred             CeeeeCCCeEEEEEEECC--CCCEEEEEEEEHHHhhh-------------------------hHHHHHHHHHHHHHHhC-
Confidence            469999999999999988  78899999997532211                         01123467899999998 


Q ss_pred             hccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q 009980           96 ENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLF  175 (521)
Q Consensus        96 ~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~  175 (521)
                          +||||+++++++...+.+|+||||+.||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+
T Consensus        53 ----~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll  128 (323)
T cd05571          53 ----RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLML  128 (323)
T ss_pred             ----CCCCCCCEEEEEEcCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEE
Confidence                9999999999999999999999999999999999988899999999999999999999999999999999999999


Q ss_pred             eeCCCCCCEEEeecCCCccCC-CCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCcHHHHH
Q 009980          176 LNDREDSPLKIMDFGLSSVEG-YTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQ  254 (521)
Q Consensus       176 ~~~~~~~~~kl~Dfg~a~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~  254 (521)
                         +.++.+||+|||+++... ........+||+.|+|||++.+..++.++||||+||++|+|++|..||.+.+......
T Consensus       129 ---~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~  205 (323)
T cd05571         129 ---DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFE  205 (323)
T ss_pred             ---CCCCCEEEeeCCCCcccccCCCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHH
Confidence               778899999999987532 2223344579999999999998899999999999999999999999999888888888


Q ss_pred             HHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCC-----CHHHHHcCCcccCC
Q 009980          255 MIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRP-----SAQELLNHPWVIGD  305 (521)
Q Consensus       255 ~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~-----t~~~~l~h~~~~~~  305 (521)
                      .+..+...++    ..+++++++||.+||..||.+||     ++.++++||||.+.
T Consensus       206 ~~~~~~~~~p----~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~  257 (323)
T cd05571         206 LILMEEIRFP----RTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASI  257 (323)
T ss_pred             HHHcCCCCCC----CCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence            8877766554    45899999999999999999999     89999999999763

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.2e-48  Score=389.17  Aligned_cols=260  Identities=29%  Similarity=0.507  Sum_probs=223.0

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ++|++.+.||+|+||+||+|+++.  +++.||||++.+.....                         ......+.+|+.
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~--~~~~vaiK~~~~~~~~~-------------------------~~~~~~~~~E~~   53 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKD--TGHIYAMKKLRKSEMLE-------------------------KEQVAHVRAERD   53 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECC--CCCEEEEEEEEHHHhhh-------------------------hhHHHHHHHHHH
Confidence            479999999999999999999988  78899999997532211                         012344778999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCC
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLK  169 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlk  169 (521)
                      ++..+     +||||+++++++.+++.+|+|||||.||+|.+++...+.+++..++.++.||+.||.|||++||+|||||
T Consensus        54 il~~l-----~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlk  128 (364)
T cd05599          54 ILAEA-----DNPWVVKLYYSFQDENYLYLIMEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIK  128 (364)
T ss_pred             HHHhC-----CCCCCcceEEEEEcCCeEEEEECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCC
Confidence            99998     8999999999999999999999999999999999988899999999999999999999999999999999


Q ss_pred             CCcEEEeeCCCCCCEEEeecCCCccCCCCC---------------------------------------CcccccCCccc
Q 009980          170 PENCLFLNDREDSPLKIMDFGLSSVEGYTD---------------------------------------PVVGLFGSIDY  210 (521)
Q Consensus       170 p~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~---------------------------------------~~~~~~gt~~y  210 (521)
                      |+|||+   +.++.++|+|||++.......                                       .....+||+.|
T Consensus       129 p~NIl~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  205 (364)
T cd05599         129 PDNLLL---DAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDY  205 (364)
T ss_pred             HHHeEE---CCCCCEEEeecccceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccc
Confidence            999999   778899999999986432110                                       01124699999


Q ss_pred             ccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCC
Q 009980          211 VSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR  290 (521)
Q Consensus       211 ~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R  290 (521)
                      +|||++.+..++.++|||||||++|+|++|.+||.+.+..+....+......+..+....+|+++++||.+||. +|.+|
T Consensus       206 ~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R  284 (364)
T cd05599         206 IAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERR  284 (364)
T ss_pred             cCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhc
Confidence            99999998899999999999999999999999999888877777777654433333334679999999999996 99999


Q ss_pred             CC---HHHHHcCCcccCC
Q 009980          291 PS---AQELLNHPWVIGD  305 (521)
Q Consensus       291 ~t---~~~~l~h~~~~~~  305 (521)
                      ++   +.+++.||||.+.
T Consensus       285 ~~~~~~~~ll~h~~~~~~  302 (364)
T cd05599         285 LGNNGVNEIKSHPFFKGV  302 (364)
T ss_pred             CCCCCHHHHhcCCCcCCC
Confidence            97   9999999999764

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=100.00  E-value=4.6e-48  Score=382.85  Aligned_cols=260  Identities=30%  Similarity=0.476  Sum_probs=226.7

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      ..-.++|++.+.||+|+||.||+|.++.. .+..||+|++.+.....                         ......+.
T Consensus        26 ~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~-~~~~vavK~~~~~~~~~-------------------------~~~~~~~~   79 (340)
T PTZ00426         26 KMKYEDFNFIRTLGTGSFGRVILATYKNE-DFPPVAIKRFEKSKIIK-------------------------QKQVDHVF   79 (340)
T ss_pred             CCChhhcEEEEEEeecCCeEEEEEEEECC-CCeEEEEEEEEHHHhhh-------------------------hhhHHHHH
Confidence            34457899999999999999999987652 24689999987532211                         01234577


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      +|+.+++.+     +||||+++++++.+.+.+|+||||+.||+|.+++...+.+++..+..++.||+.||.|||++||+|
T Consensus        80 ~E~~~l~~l-----~hp~Iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH  154 (340)
T PTZ00426         80 SERKILNYI-----NHPFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVY  154 (340)
T ss_pred             HHHHHHHhC-----CCCCCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEc
Confidence            899999998     999999999999999999999999999999999998889999999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCC
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFI  245 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~  245 (521)
                      |||||+|||+   +.++.+||+|||++.....  .....+||+.|+|||++.+..++.++||||+||++|+|++|.+||.
T Consensus       155 rDLkp~NILl---~~~~~ikL~DFG~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~  229 (340)
T PTZ00426        155 RDLKPENLLL---DKDGFIKMTDFGFAKVVDT--RTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFY  229 (340)
T ss_pred             cCCCHHHEEE---CCCCCEEEecCCCCeecCC--CcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCC
Confidence            9999999999   7788999999999976542  2234579999999999998889999999999999999999999999


Q ss_pred             CCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCC-----CHHHHHcCCcccCC
Q 009980          246 AQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRP-----SAQELLNHPWVIGD  305 (521)
Q Consensus       246 ~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~-----t~~~~l~h~~~~~~  305 (521)
                      +.+.......+..+...++    ..+++.++++|++||+.||.+|+     |++++++||||.+.
T Consensus       230 ~~~~~~~~~~i~~~~~~~p----~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~  290 (340)
T PTZ00426        230 ANEPLLIYQKILEGIIYFP----KFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNI  290 (340)
T ss_pred             CCCHHHHHHHHhcCCCCCC----CCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence            9888888888888776554    45789999999999999999995     89999999999753

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=100.00  E-value=6.5e-48  Score=373.55  Aligned_cols=261  Identities=27%  Similarity=0.424  Sum_probs=216.9

Q ss_pred             ceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHH
Q 009980           11 EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILV   90 (521)
Q Consensus        11 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   90 (521)
                      .|++.+.||+|+||.||+|.++.  +++.||+|.+.+.....                         ......+.+|+.+
T Consensus         1 ~f~~~~~lg~G~~g~V~~~~~~~--~~~~~avK~~~~~~~~~-------------------------~~~~~~~~~E~~i   53 (285)
T cd05631           1 TFRHYRVLGKGGFGEVCACQVRA--TGKMYACKKLEKKRIKK-------------------------RKGEAMALNEKRI   53 (285)
T ss_pred             CceEEEEEecCCCEEEEEEEEec--CCceEEEEEeeHhhhhh-------------------------hhhHHHHHHHHHH
Confidence            37889999999999999999988  78899999987543211                         0122346789999


Q ss_pred             HHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 009980           91 MRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ--ERYMEVGAAAVIRQIAEGLAALHQANIVHRDL  168 (521)
Q Consensus        91 l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~al~~lH~~~i~H~dl  168 (521)
                      ++++     +||||+++++++.+++..|+||||+.||+|.+++...  ..+++..+..++.|++.||.|||++||+||||
T Consensus        54 l~~l-----~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~di  128 (285)
T cd05631          54 LEKV-----NSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDL  128 (285)
T ss_pred             HHhc-----CCCcEEEEEEEEccCCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCC
Confidence            9998     9999999999999999999999999999998877543  36899999999999999999999999999999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCC
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQS  248 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~  248 (521)
                      ||+|||+   +.++.++|+|||++.............||+.|+|||++.+..++.++||||+||++|+|++|++||.+..
T Consensus       129 kp~Nill---~~~~~~kl~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~  205 (285)
T cd05631         129 KPENILL---DDRGHIRISDLGLAVQIPEGETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRK  205 (285)
T ss_pred             CHHHEEE---CCCCCEEEeeCCCcEEcCCCCeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCC
Confidence            9999999   7778899999999986543333445579999999999999899999999999999999999999998765


Q ss_pred             cHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCC-----HHHHHcCCcccCCC
Q 009980          249 NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPS-----AQELLNHPWVIGDS  306 (521)
Q Consensus       249 ~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t-----~~~~l~h~~~~~~~  306 (521)
                      .......+..............+|+++.+|+.+||+.||.+|||     ++++++||||.+..
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~  268 (285)
T cd05631         206 ERVKREEVDRRVKEDQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNIN  268 (285)
T ss_pred             cchhHHHHHHHhhcccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCC
Confidence            53332222221111222233568999999999999999999997     89999999997643

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.5e-48  Score=382.03  Aligned_cols=259  Identities=26%  Similarity=0.389  Sum_probs=223.5

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ++|++.+.||+|+||.||+|+++.  +++.||||++.+.....                         ......+.+|+.
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~--~~~~vaiK~~~~~~~~~-------------------------~~~~~~~~~e~~   53 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKD--TGEIVALKRMKKSLLFK-------------------------LNEVRHVLTERD   53 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECC--CCCEEEEEEEEHHHHhh-------------------------hhHHHHHHHHHH
Confidence            479999999999999999999987  78899999997532211                         012345778999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCC
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLK  169 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlk  169 (521)
                      ++..+     +||||+++++++...+..|+||||++||+|.+++...+.+++..++.++.||+.||.|||++||+|||||
T Consensus        54 ~l~~~-----~h~~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlk  128 (333)
T cd05600          54 ILTTT-----KSEWLVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLK  128 (333)
T ss_pred             HHHhC-----CCCCCccEEEEEEcCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCC
Confidence            99988     8999999999999999999999999999999999988899999999999999999999999999999999


Q ss_pred             CCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCc
Q 009980          170 PENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSN  249 (521)
Q Consensus       170 p~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~  249 (521)
                      |+||++   +.++.+||+|||++.....  .....+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+.
T Consensus       129 p~Nil~---~~~~~~kL~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~  203 (333)
T cd05600         129 PENFLI---DASGHIKLTDFGLSKGIVT--YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTP  203 (333)
T ss_pred             HHHEEE---CCCCCEEEEeCcCCccccc--ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCH
Confidence            999999   7788999999999976543  23455799999999999988999999999999999999999999998888


Q ss_pred             HHHHHHHHcCCCCCchhhh----hccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCC
Q 009980          250 RQKQQMIMAGEFSFYEQTW----KNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGD  305 (521)
Q Consensus       250 ~~~~~~i~~~~~~~~~~~~----~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~  305 (521)
                      .+....+.........+.+    ..+|.++.+||.+||..+|.+|||+.++++||||...
T Consensus       204 ~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~~~  263 (333)
T cd05600         204 NETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKEV  263 (333)
T ss_pred             HHHHHHHHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccCCC
Confidence            7777666554322222211    2579999999999999999999999999999999753

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=100.00  E-value=2.3e-47  Score=370.23  Aligned_cols=256  Identities=26%  Similarity=0.415  Sum_probs=212.2

Q ss_pred             ccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEI   88 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   88 (521)
                      .++|++.+.||.|+||.||+|+++.  +++.||+|++......                           .....+.+|+
T Consensus         4 ~~~y~~~~~lg~G~~g~Vy~~~~~~--~~~~vaiK~~~~~~~~---------------------------~~~~~~~~E~   54 (288)
T cd07871           4 LETYVKLDKLGEGTYATVFKGRSKL--TENLVALKEIRLEHEE---------------------------GAPCTAIREV   54 (288)
T ss_pred             cccceEeeEEecCCCEEEEEEEECC--CCCEEEEEEecccccC---------------------------CcchhHHHHH
Confidence            3579999999999999999999987  7889999998643211                           1123467899


Q ss_pred             HHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecc
Q 009980           89 LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE-RYMEVGAAAVIRQIAEGLAALHQANIVHRD  167 (521)
Q Consensus        89 ~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qil~al~~lH~~~i~H~d  167 (521)
                      .+++++     +||||+++++++.+.+..|+||||+.| +|.+++...+ .+++..+..++.||+.||.|||++||+|||
T Consensus        55 ~~l~~l-----~h~niv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~d  128 (288)
T cd07871          55 SLLKNL-----KHANIVTLHDIIHTERCLTLVFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRD  128 (288)
T ss_pred             HHHHhC-----CCCCEeeEEEEEcCCCeEEEEEeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence            999998     999999999999999999999999976 8988887654 478999999999999999999999999999


Q ss_pred             CCCCcEEEeeCCCCCCEEEeecCCCccCCCCC-CcccccCCccccccccccc-CCCCchhhhHHHHHHHHHHHhCCCCCC
Q 009980          168 LKPENCLFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALLQ-DRITSKSDMWSLGVILYILLSGYPPFI  245 (521)
Q Consensus       168 lkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~ll~g~~pf~  245 (521)
                      |||+|||+   +.++.+||+|||+++...... ......||+.|+|||++.+ ..++.++||||+||++|+|++|++||.
T Consensus       129 lkp~Nil~---~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~  205 (288)
T cd07871         129 LKPQNLLI---NEKGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFP  205 (288)
T ss_pred             CCHHHEEE---CCCCCEEECcCcceeeccCCCccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCC
Confidence            99999999   777889999999987543222 2234568999999998865 568999999999999999999999998


Q ss_pred             CCCcHHHHHHHHcCCCCCchh--------------------------hhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          246 AQSNRQKQQMIMAGEFSFYEQ--------------------------TWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       246 ~~~~~~~~~~i~~~~~~~~~~--------------------------~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      +.+..+....+.......+..                          ....+++++++||.+||..||.+|||++|+|+|
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h  285 (288)
T cd07871         206 GSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH  285 (288)
T ss_pred             CCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence            887766655544321111111                          123468899999999999999999999999999


Q ss_pred             Ccc
Q 009980          300 PWV  302 (521)
Q Consensus       300 ~~~  302 (521)
                      |||
T Consensus       286 p~f  288 (288)
T cd07871         286 SYF  288 (288)
T ss_pred             CCC
Confidence            997

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=100.00  E-value=2.3e-47  Score=370.31  Aligned_cols=257  Identities=25%  Similarity=0.352  Sum_probs=212.8

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ++|++.+.||+|+||.||+|+++.  +++.||||++.......                          .....+.+|+.
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~--~~~~~avK~~~~~~~~~--------------------------~~~~~~~~E~~   52 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKE--TKEIVAIKKFKDSEENE--------------------------EVKETTLRELK   52 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECC--CCcEEEEEEEecccccc--------------------------cchhhHHHHHH
Confidence            479999999999999999999987  78899999987532211                          12345778999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCC
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLK  169 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlk  169 (521)
                      +++++     +||||+++++++..++.+|+||||+.++.+..+......+++..++.++.|++.||.|||+.||+|||||
T Consensus        53 ~l~~l-----~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlk  127 (287)
T cd07848          53 MLRTL-----KQENIVELKEAFRRRGKLYLVFEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIK  127 (287)
T ss_pred             HHHhC-----CCccccchhhhEecCCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence            99998     9999999999999999999999999998776555555679999999999999999999999999999999


Q ss_pred             CCcEEEeeCCCCCCEEEeecCCCccCCCCC--CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 009980          170 PENCLFLNDREDSPLKIMDFGLSSVEGYTD--PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQ  247 (521)
Q Consensus       170 p~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~  247 (521)
                      |+||++   +.++.+||+|||++.......  ......||+.|+|||++.+..++.++||||+||++|+|++|++||.+.
T Consensus       128 p~Nill---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~  204 (287)
T cd07848         128 PENLLI---SHNDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGE  204 (287)
T ss_pred             HHHEEE---cCCCcEEEeeccCcccccccccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCC
Confidence            999999   777899999999998653222  223456899999999999888999999999999999999999999887


Q ss_pred             CcHHHHHHHHcCCCCCc----------------------------hhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          248 SNRQKQQMIMAGEFSFY----------------------------EQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       248 ~~~~~~~~i~~~~~~~~----------------------------~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      +..+....+.....+.+                            ...+..+|.++++||.+||.+||.+|||++++|+|
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h  284 (287)
T cd07848         205 SEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH  284 (287)
T ss_pred             CHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence            65544333322111100                            01123478899999999999999999999999999


Q ss_pred             Ccc
Q 009980          300 PWV  302 (521)
Q Consensus       300 ~~~  302 (521)
                      |||
T Consensus       285 p~f  287 (287)
T cd07848         285 PAF  287 (287)
T ss_pred             CCC
Confidence            997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.6e-47  Score=375.67  Aligned_cols=249  Identities=30%  Similarity=0.501  Sum_probs=217.9

Q ss_pred             ccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHHhhc
Q 009980           18 LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVEN   97 (521)
Q Consensus        18 lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~   97 (521)
                      ||+|+||.||+|+++.  +++.||+|++.+.....                         ......+.+|+.+++++   
T Consensus         1 lg~G~~g~Vy~~~~~~--~~~~~aiK~i~~~~~~~-------------------------~~~~~~~~~E~~~l~~l---   50 (312)
T cd05585           1 IGKGSFGKVMQVRKRD--TQRIYALKTIRKAHIVS-------------------------RSEVTHTLAERTVLAQV---   50 (312)
T ss_pred             CCcCCCeEEEEEEECC--CCCEEEEEEEEHHHhhh-------------------------hhHHHHHHHHHHHHHhC---
Confidence            7999999999999987  78899999997532211                         01234467899999998   


Q ss_pred             cCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEee
Q 009980           98 VSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLN  177 (521)
Q Consensus        98 ~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~~~  177 (521)
                        +||||+++++++...+..|+||||+.||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+||++  
T Consensus        51 --~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili--  126 (312)
T cd05585          51 --NCPFIVPLKFSFQSPEKLYLVLAFINGGELFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILL--  126 (312)
T ss_pred             --CCCcEeceeeEEecCCeEEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEE--
Confidence              9999999999999999999999999999999999988899999999999999999999999999999999999999  


Q ss_pred             CCCCCCEEEeecCCCccCCCC-CCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCcHHHHHHH
Q 009980          178 DREDSPLKIMDFGLSSVEGYT-DPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMI  256 (521)
Q Consensus       178 ~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i  256 (521)
                       +.++.++|+|||+++..... ......+||+.|+|||++.+..++.++||||+||++|+|++|.+||.+.+..+....+
T Consensus       127 -~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~  205 (312)
T cd05585         127 -DYQGHIALCDFGLCKLNMKDDDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKI  205 (312)
T ss_pred             -CCCCcEEEEECcccccCccCCCccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHH
Confidence             77889999999999753222 2233457999999999999999999999999999999999999999998888888888


Q ss_pred             HcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCC---CHHHHHcCCcccCC
Q 009980          257 MAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRP---SAQELLNHPWVIGD  305 (521)
Q Consensus       257 ~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~---t~~~~l~h~~~~~~  305 (521)
                      ..+...++    ..+++++++||.+||..||.+||   ++.++++||||...
T Consensus       206 ~~~~~~~~----~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~  253 (312)
T cd05585         206 LQEPLRFP----DGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQL  253 (312)
T ss_pred             HcCCCCCC----CcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCCC
Confidence            87766554    45899999999999999999997   58999999999754

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=100.00  E-value=1.8e-47  Score=385.50  Aligned_cols=260  Identities=27%  Similarity=0.450  Sum_probs=218.7

Q ss_pred             ceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHH
Q 009980           11 EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILV   90 (521)
Q Consensus        11 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   90 (521)
                      .|++++.||+|+||+||+|+++.  +++.||||++.+.....                         ......+.+|+.+
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~--~~~~~aiK~i~~~~~~~-------------------------~~~~~~~~~E~~i   54 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVD--THALYAMKTLRKKDVLN-------------------------RNQVAHVKAERDI   54 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECC--CCCEEEEEEEEHHHhhh-------------------------hHHHHHHHHHHHH
Confidence            68999999999999999999988  78899999997533211                         0123457889999


Q ss_pred             HHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCC
Q 009980           91 MRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKP  170 (521)
Q Consensus        91 l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp  170 (521)
                      ++++     +||||+++++++.+.+.+|+|||||+||+|.+++...+.+++..++.++.||+.||.|||++||+||||||
T Consensus        55 l~~l-----~h~~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp  129 (381)
T cd05626          55 LAEA-----DNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKP  129 (381)
T ss_pred             HHhc-----CCCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcH
Confidence            9998     99999999999999999999999999999999999888999999999999999999999999999999999


Q ss_pred             CcEEEeeCCCCCCEEEeecCCCccCCCCC------------------------------------------------Ccc
Q 009980          171 ENCLFLNDREDSPLKIMDFGLSSVEGYTD------------------------------------------------PVV  202 (521)
Q Consensus       171 ~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~------------------------------------------------~~~  202 (521)
                      +|||+   +..+.+||+|||++.......                                                ...
T Consensus       130 ~Nili---~~~~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (381)
T cd05626         130 DNILI---DLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAH  206 (381)
T ss_pred             HHEEE---CCCCCEEEeeCcCCcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccc
Confidence            99999   778899999999975321000                                                012


Q ss_pred             cccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHh
Q 009980          203 GLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSL  282 (521)
Q Consensus       203 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~  282 (521)
                      ..+||+.|+|||++.+..++.++||||+||++|+|++|.+||...+..+....+.........+.+..+|+++++||.+|
T Consensus       207 ~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~l  286 (381)
T cd05626         207 SLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKL  286 (381)
T ss_pred             cccCCccccCHHHHcCCCCCCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHH
Confidence            34799999999999988999999999999999999999999998887776666665433333333456899999999996


Q ss_pred             ccC--CCCCCCCHHHHHcCCcccCC
Q 009980          283 LTV--DPNRRPSAQELLNHPWVIGD  305 (521)
Q Consensus       283 l~~--dp~~R~t~~~~l~h~~~~~~  305 (521)
                      +..  +|..|+|+.++++||||.+.
T Consensus       287 l~~~~~~~~R~~~~~~l~hp~f~~~  311 (381)
T cd05626         287 CCSAEERLGRNGADDIKAHPFFSEV  311 (381)
T ss_pred             ccCcccccCCCCHHHHhcCcccCCC
Confidence            654  55559999999999999753

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=9.7e-48  Score=387.23  Aligned_cols=260  Identities=28%  Similarity=0.474  Sum_probs=218.8

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ++|++.+.||+|+||.||+|.++.  +++.||||++.+.....                         ......+.+|+.
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~--~~~~~aiK~~~~~~~~~-------------------------~~~~~~~~~E~~   53 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKD--TGKIYAMKTLLKSEMFK-------------------------KDQLAHVKAERD   53 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECC--CCCEEEEEEEEHHHHHH-------------------------hHHHHHHHHHHH
Confidence            479999999999999999999988  78899999986532110                         012345778999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCC
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLK  169 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlk  169 (521)
                      +++++     +||||+++++++.+++.+|+||||++||+|.+++...+.+++..++.++.|++.||.|||++||+|||||
T Consensus        54 il~~l-----~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlk  128 (377)
T cd05629          54 VLAES-----DSPWVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIK  128 (377)
T ss_pred             HHHhC-----CCCCcceEEEEEEcCCeeEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCC
Confidence            99988     9999999999999999999999999999999999988899999999999999999999999999999999


Q ss_pred             CCcEEEeeCCCCCCEEEeecCCCccCCCCC------------------------------------------------Cc
Q 009980          170 PENCLFLNDREDSPLKIMDFGLSSVEGYTD------------------------------------------------PV  201 (521)
Q Consensus       170 p~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~------------------------------------------------~~  201 (521)
                      |+|||+   +.++.+||+|||+|+......                                                ..
T Consensus       129 p~NIll---~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (377)
T cd05629         129 PDNILI---DRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMA  205 (377)
T ss_pred             HHHEEE---CCCCCEEEeecccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccc
Confidence            999999   678899999999986321000                                                00


Q ss_pred             ccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHH
Q 009980          202 VGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISS  281 (521)
Q Consensus       202 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~  281 (521)
                      ...+||+.|+|||++.+..++.++||||+||++|+|++|.+||.+.+..+....+.........+....++.++++||.+
T Consensus       206 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~  285 (377)
T cd05629         206 YSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRR  285 (377)
T ss_pred             cccCCCccccCHHHHccCCCCCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHH
Confidence            12469999999999998899999999999999999999999998888777777776543333222334589999999999


Q ss_pred             hccCCCCCC---CCHHHHHcCCcccCC
Q 009980          282 LLTVDPNRR---PSAQELLNHPWVIGD  305 (521)
Q Consensus       282 ~l~~dp~~R---~t~~~~l~h~~~~~~  305 (521)
                      ||. +|.+|   +|+.+++.||||.+.
T Consensus       286 lL~-~~~~r~~r~~~~~~l~hp~~~~~  311 (377)
T cd05629         286 LIT-NAENRLGRGGAHEIKSHPFFRGV  311 (377)
T ss_pred             Hhc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence            997 67765   599999999999753

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=100.00  E-value=2.4e-47  Score=376.64  Aligned_cols=251  Identities=29%  Similarity=0.476  Sum_probs=218.6

Q ss_pred             ccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHHh
Q 009980           16 DILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIV   95 (521)
Q Consensus        16 ~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~   95 (521)
                      +.||+|+||.||+|+++.  +++.||||++.+.....                         ......+.+|+.+++.+ 
T Consensus         1 ~~lG~G~~g~Vy~~~~~~--~~~~~avK~~~~~~~~~-------------------------~~~~~~~~~E~~~l~~l-   52 (328)
T cd05593           1 KLLGKGTFGKVILVREKA--SGKYYAMKILKKEVIIA-------------------------KDEVAHTLTESRVLKNT-   52 (328)
T ss_pred             CeeeeCCCEEEEEEEECC--CCCEEEEEEEEHHHhhh-------------------------hhHHHHHHHHHHHHHhC-
Confidence            469999999999999987  78899999997532211                         01234567899999988 


Q ss_pred             hccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q 009980           96 ENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLF  175 (521)
Q Consensus        96 ~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~  175 (521)
                          +||||+++++++...+.+|+||||++||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+
T Consensus        53 ----~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll  128 (328)
T cd05593          53 ----RHPFLTSLKYSFQTKDRLCFVMEYVNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLML  128 (328)
T ss_pred             ----CCCCCcceEEEEEcCCEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEE
Confidence                9999999999999999999999999999999999888889999999999999999999999999999999999999


Q ss_pred             eeCCCCCCEEEeecCCCccCCC-CCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCcHHHHH
Q 009980          176 LNDREDSPLKIMDFGLSSVEGY-TDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQ  254 (521)
Q Consensus       176 ~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~  254 (521)
                         +.++.+||+|||+++.... .......+||+.|+|||++.+..++.++||||+||++|+|++|..||.+.+..+...
T Consensus       129 ---~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~  205 (328)
T cd05593         129 ---DKDGHIKITDFGLCKEGITDAATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFE  205 (328)
T ss_pred             ---CCCCcEEEecCcCCccCCCcccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHH
Confidence               7788999999999875322 222334579999999999998899999999999999999999999999888877777


Q ss_pred             HHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCC-----CHHHHHcCCcccCC
Q 009980          255 MIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRP-----SAQELLNHPWVIGD  305 (521)
Q Consensus       255 ~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~-----t~~~~l~h~~~~~~  305 (521)
                      .+......++    ..+++++++||.+||..||.+|+     ++.++++||||.+.
T Consensus       206 ~~~~~~~~~p----~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~  257 (328)
T cd05593         206 LILMEDIKFP----RTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGV  257 (328)
T ss_pred             HhccCCccCC----CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence            7776665554    45899999999999999999997     89999999999753

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=100.00  E-value=8.8e-48  Score=387.52  Aligned_cols=260  Identities=27%  Similarity=0.450  Sum_probs=221.6

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      .+|++.+.||+|+||.||+|+++.  +++.||||++.+.....                         ......+.+|+.
T Consensus         1 ~~y~~~~~lG~G~~g~V~~a~~~~--~~~~~avK~~~~~~~~~-------------------------~~~~~~~~~E~~   53 (376)
T cd05598           1 SMFVKIKTIGIGAFGEVCLVRKVD--TNALYAMKTLRKADVLM-------------------------RNQAAHVKAERD   53 (376)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECC--CCCEEEEEEEcHHHHHh-------------------------hhhHHHHHHHHH
Confidence            479999999999999999999988  78899999986532111                         012345778999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCC
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLK  169 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlk  169 (521)
                      +++++     +||||+++++.+.+++.+|+|||||+||+|.+++...+.+++..++.++.||+.||.|||++||+|||||
T Consensus        54 il~~l-----~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlk  128 (376)
T cd05598          54 ILAEA-----DNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIK  128 (376)
T ss_pred             HHHhC-----CCCCcceEEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCC
Confidence            99998     9999999999999999999999999999999999988889999999999999999999999999999999


Q ss_pred             CCcEEEeeCCCCCCEEEeecCCCccCCCC--------------------------------------------CCccccc
Q 009980          170 PENCLFLNDREDSPLKIMDFGLSSVEGYT--------------------------------------------DPVVGLF  205 (521)
Q Consensus       170 p~Nil~~~~~~~~~~kl~Dfg~a~~~~~~--------------------------------------------~~~~~~~  205 (521)
                      |+|||+   +.++.+||+|||+|......                                            ......+
T Consensus       129 p~Nill---~~~~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (376)
T cd05598         129 PDNILI---DRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLV  205 (376)
T ss_pred             HHHEEE---CCCCCEEEEeCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccC
Confidence            999999   77889999999997522100                                            0011347


Q ss_pred             CCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccC
Q 009980          206 GSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTV  285 (521)
Q Consensus       206 gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~  285 (521)
                      ||+.|+|||++.+..++.++|||||||++|+|++|++||.+.+..+....+.........+.+..+++++.++|.+|+ .
T Consensus       206 gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~  284 (376)
T cd05598         206 GTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-C  284 (376)
T ss_pred             CCccccCHHHHcCCCCCcceeeeeccceeeehhhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-c
Confidence            999999999999999999999999999999999999999988877776666655444443444578999999999977 5


Q ss_pred             CCCCCC---CHHHHHcCCcccCC
Q 009980          286 DPNRRP---SAQELLNHPWVIGD  305 (521)
Q Consensus       286 dp~~R~---t~~~~l~h~~~~~~  305 (521)
                      +|.+|+   |+.++++||||.+.
T Consensus       285 ~p~~R~~~~t~~ell~h~~~~~~  307 (376)
T cd05598         285 GAEDRLGKNGADEIKAHPFFKGI  307 (376)
T ss_pred             CHhhcCCCCCHHHHhCCCCcCCC
Confidence            999999   99999999999763

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=100.00  E-value=1.6e-47  Score=386.37  Aligned_cols=260  Identities=28%  Similarity=0.444  Sum_probs=221.1

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      .+|++++.||+|+||.||+|+++.  +++.||+|++.+.....                         ......+.+|+.
T Consensus         1 ~~f~~~~~LG~G~~g~Vy~a~~~~--~~~~~aiK~i~~~~~~~-------------------------~~~~~~~~~E~~   53 (382)
T cd05625           1 SMFVKIKTLGIGAFGEVCLARKVD--TKALYAMKTLRKKDVLL-------------------------RNQVAHVKAERD   53 (382)
T ss_pred             CCcEEEEEEEeCCCEEEEEEEECC--CCCEEEEEEEeHHHhhh-------------------------HHHHHHHHHHHH
Confidence            369999999999999999999988  78899999987532110                         012345778999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCC
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLK  169 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlk  169 (521)
                      +++++     +||||+++++.+.+++.+|+|||||+||+|.+++...+.+++..++.++.||+.||.|||++||+|||||
T Consensus        54 il~~~-----~h~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlK  128 (382)
T cd05625          54 ILAEA-----DNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIK  128 (382)
T ss_pred             HHHhC-----CCCcCCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence            99998     9999999999999999999999999999999999888889999999999999999999999999999999


Q ss_pred             CCcEEEeeCCCCCCEEEeecCCCccCCCC------------------------------------------------CCc
Q 009980          170 PENCLFLNDREDSPLKIMDFGLSSVEGYT------------------------------------------------DPV  201 (521)
Q Consensus       170 p~Nil~~~~~~~~~~kl~Dfg~a~~~~~~------------------------------------------------~~~  201 (521)
                      |+|||+   +.++.+||+|||+|......                                                ...
T Consensus       129 p~NILl---~~~g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (382)
T cd05625         129 PDNILI---DRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLA  205 (382)
T ss_pred             HHHEEE---CCCCCEEEeECCCCccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccc
Confidence            999999   77889999999997522100                                                001


Q ss_pred             ccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHH
Q 009980          202 VGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISS  281 (521)
Q Consensus       202 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~  281 (521)
                      ...+||+.|+|||++.+..|+.++||||+||++|+|++|++||.+.+..+....+.........+.+..++++++++|.+
T Consensus       206 ~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~  285 (382)
T cd05625         206 HSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIK  285 (382)
T ss_pred             cccccCcccCCHHHhcCCCCCCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHH
Confidence            23469999999999999999999999999999999999999999888777777776654444434446789999999999


Q ss_pred             hccCCCCCCCC---HHHHHcCCcccCC
Q 009980          282 LLTVDPNRRPS---AQELLNHPWVIGD  305 (521)
Q Consensus       282 ~l~~dp~~R~t---~~~~l~h~~~~~~  305 (521)
                      |+ .+|.+|++   +.++++||||...
T Consensus       286 l~-~~p~~R~~~~~~~ei~~hp~f~~~  311 (382)
T cd05625         286 LC-RGPEDRLGKNGADEIKAHPFFKTI  311 (382)
T ss_pred             Hc-cCHhHcCCCCCHHHHhcCCCcCCc
Confidence            86 59999987   9999999999753

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=100.00  E-value=3.4e-47  Score=352.68  Aligned_cols=262  Identities=29%  Similarity=0.421  Sum_probs=221.8

Q ss_pred             ccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEI   88 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   88 (521)
                      ...|+.++.||+|+||+||+|+.+.  +|+.||+|.++......  |                        ......+|+
T Consensus        10 ~~~~~~~eklGeGtyg~Vykar~~~--~g~~VALKkirl~~~~E--G------------------------~P~taiREi   61 (323)
T KOG0594|consen   10 MFDYEKVEKLGEGTYGVVYKARSKR--TGKFVALKKIRLEFEEE--G------------------------VPSTAIREI   61 (323)
T ss_pred             HHHHHHHHHhCCCCceEEEEEEEec--CCCEEEEEEEecccccc--C------------------------CCchhhHHH
Confidence            4568888999999999999999998  78999999997653321  1                        012257899


Q ss_pred             HHHHHHhhccCCCCC-ccceeEEEEeCC------eEEEEEeccCCCchHHHHHhcC----CCCHHHHHHHHHHHHHHHHH
Q 009980           89 LVMRKIVENVSPHPN-VIDLYDVYEDQN------GVHLILELCSGGELFDRIVAQE----RYMEVGAAAVIRQIAEGLAA  157 (521)
Q Consensus        89 ~~l~~l~~~~~~hpn-iv~~~~~~~~~~------~~~lv~e~~~gg~L~~~l~~~~----~~~~~~~~~i~~qil~al~~  157 (521)
                      .+++.|     +|+| |+++++++.+.+      .+|+|+||++- +|..++...+    .++...++.+++||+.||+|
T Consensus        62 sllk~L-----~~~~~iv~L~dv~~~~~~~~~~~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~  135 (323)
T KOG0594|consen   62 SLLKRL-----SHANHIVRLHDVIHTSNNHRGIGKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAF  135 (323)
T ss_pred             HHHHHh-----CCCcceEEEEeeeeecccccccceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHH
Confidence            999999     9999 999999998877      89999999965 9999988755    57888999999999999999


Q ss_pred             HHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCC-CCCCcccccCCcccccccccccC-CCCchhhhHHHHHHHH
Q 009980          158 LHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEG-YTDPVVGLFGSIDYVSPEALLQD-RITSKSDMWSLGVILY  235 (521)
Q Consensus       158 lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~-~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~  235 (521)
                      ||++||+||||||+|||+   +..+.+||+|||+|+... +.......++|.+|+|||++.+. .|+..+||||+|||++
T Consensus       136 ~H~~~IlHRDLKPQNlLi---~~~G~lKlaDFGlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfa  212 (323)
T KOG0594|consen  136 LHSHGILHRDLKPQNLLI---SSSGVLKLADFGLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFA  212 (323)
T ss_pred             HHhCCeecccCCcceEEE---CCCCcEeeeccchHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHH
Confidence            999999999999999999   779999999999999765 33446677899999999999876 7899999999999999


Q ss_pred             HHHhCCCCCCCCCcHHHHHHHHcCCCCCchhhh--------------------------hccCHHHHHHHHHhccCCCCC
Q 009980          236 ILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTW--------------------------KNISSSAKQLISSLLTVDPNR  289 (521)
Q Consensus       236 ~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~--------------------------~~~s~~~~~li~~~l~~dp~~  289 (521)
                      ||+++++.|.+.++.+....|..-...+....|                          +..+++..+++.+||+.+|.+
T Consensus       213 Em~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~  292 (323)
T KOG0594|consen  213 EMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAK  292 (323)
T ss_pred             HHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCccc
Confidence            999999999999988877777653333322222                          223457899999999999999


Q ss_pred             CCCHHHHHcCCcccCCCC
Q 009980          290 RPSAQELLNHPWVIGDSA  307 (521)
Q Consensus       290 R~t~~~~l~h~~~~~~~~  307 (521)
                      |.|+..+|.||||.....
T Consensus       293 R~Sa~~al~h~yf~~~~~  310 (323)
T KOG0594|consen  293 RISAKGALTHPYFSELPE  310 (323)
T ss_pred             CcCHHHHhcChhhccccc
Confidence            999999999999986544

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=100.00  E-value=3.4e-47  Score=374.88  Aligned_cols=251  Identities=28%  Similarity=0.465  Sum_probs=218.8

Q ss_pred             ccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHHh
Q 009980           16 DILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIV   95 (521)
Q Consensus        16 ~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~   95 (521)
                      +.||+|+||.||+|+++.  +++.||+|++.+.....                         ......+.+|+.+++++ 
T Consensus         1 ~~lG~G~~g~Vy~~~~~~--~~~~vaiK~~~~~~~~~-------------------------~~~~~~~~~E~~~l~~l-   52 (323)
T cd05595           1 KLLGKGTFGKVILVREKA--TGRYYAMKILRKEVIIA-------------------------KDEVAHTVTESRVLQNT-   52 (323)
T ss_pred             CeeeeCCCEEEEEEEECC--CCCEEEEEEEEHHHhhh-------------------------hHHHHHHHHHHHHHHhC-
Confidence            469999999999999987  78899999997532211                         01223466799999988 


Q ss_pred             hccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q 009980           96 ENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLF  175 (521)
Q Consensus        96 ~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~  175 (521)
                          +||||+++++++...+.+|+||||+.||+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||+
T Consensus        53 ----~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll  128 (323)
T cd05595          53 ----RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML  128 (323)
T ss_pred             ----CCCCCcceeeEEecCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEE
Confidence                9999999999999999999999999999999999888889999999999999999999999999999999999999


Q ss_pred             eeCCCCCCEEEeecCCCccCCC-CCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCcHHHHH
Q 009980          176 LNDREDSPLKIMDFGLSSVEGY-TDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQ  254 (521)
Q Consensus       176 ~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~  254 (521)
                         +.++.+||+|||++..... .......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+......
T Consensus       129 ---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~  205 (323)
T cd05595         129 ---DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFE  205 (323)
T ss_pred             ---cCCCCEEecccHHhccccCCCCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHH
Confidence               7788999999999875322 222334579999999999998899999999999999999999999999888888887


Q ss_pred             HHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCC-----CHHHHHcCCcccCC
Q 009980          255 MIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRP-----SAQELLNHPWVIGD  305 (521)
Q Consensus       255 ~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~-----t~~~~l~h~~~~~~  305 (521)
                      .+......++    ..++++++++|.+||..||.+||     ++.++++||||.+.
T Consensus       206 ~~~~~~~~~p----~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~  257 (323)
T cd05595         206 LILMEEIRFP----RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI  257 (323)
T ss_pred             HHhcCCCCCC----CCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCC
Confidence            7777666554    45899999999999999999998     89999999999763

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=100.00  E-value=4.3e-47  Score=373.65  Aligned_cols=252  Identities=25%  Similarity=0.437  Sum_probs=217.2

Q ss_pred             ccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHHh
Q 009980           16 DILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIV   95 (521)
Q Consensus        16 ~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~   95 (521)
                      +.||+|+||.||+|+++.  +++.||||++.+.....                         ......+..|+.++..+ 
T Consensus         1 ~~lg~G~~g~V~~~~~~~--~~~~~aiK~~~~~~~~~-------------------------~~~~~~~~~e~~~l~~~-   52 (320)
T cd05590           1 RVLGKGSFGKVMLARLKE--SGRLYAVKVLKKDVILQ-------------------------DDDVECTMTEKRILSLA-   52 (320)
T ss_pred             CeeeeCCCeEEEEEEEcC--CCCEEEEEEEEHHHHhh-------------------------ccHHHHHHHHHHHHHhc-
Confidence            469999999999999987  78899999997532111                         01123355677777654 


Q ss_pred             hccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q 009980           96 ENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLF  175 (521)
Q Consensus        96 ~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~  175 (521)
                         .+||||+++++++.+.+.+|+||||++||+|.+++...+.+++..+..++.|++.||.|||++||+||||||+|||+
T Consensus        53 ---~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli  129 (320)
T cd05590          53 ---RNHPFLTQLYCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLL  129 (320)
T ss_pred             ---cCCCchhceeeEEEcCCEEEEEEcCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEE
Confidence               37999999999999999999999999999999999988899999999999999999999999999999999999999


Q ss_pred             eeCCCCCCEEEeecCCCccCCC-CCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCcHHHHH
Q 009980          176 LNDREDSPLKIMDFGLSSVEGY-TDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQ  254 (521)
Q Consensus       176 ~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~  254 (521)
                         +.++.+||+|||+++.... .......+||+.|+|||++.+..++.++||||+||++|+|++|+.||.+.+..+...
T Consensus       130 ---~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~  206 (320)
T cd05590         130 ---DHEGHCKLADFGMCKEGIFNGKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFE  206 (320)
T ss_pred             ---CCCCcEEEeeCCCCeecCcCCCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHH
Confidence               7788999999999875322 222344579999999999998899999999999999999999999999998888888


Q ss_pred             HHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCH------HHHHcCCcccCC
Q 009980          255 MIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSA------QELLNHPWVIGD  305 (521)
Q Consensus       255 ~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~------~~~l~h~~~~~~  305 (521)
                      .+..+...++    ..+++++++||.+||..||.+||++      +++++||||...
T Consensus       207 ~i~~~~~~~~----~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~  259 (320)
T cd05590         207 AILNDEVVYP----TWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKEL  259 (320)
T ss_pred             HHhcCCCCCC----CCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCC
Confidence            8887766544    3479999999999999999999998      999999999753

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.8e-47  Score=381.93  Aligned_cols=260  Identities=30%  Similarity=0.500  Sum_probs=223.9

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ++|++.+.||+|+||.||+|++..  +++.||||++.+.....                         ......+..|+.
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~--~~~~~aiK~~~~~~~~~-------------------------~~~~~~~~~e~~   53 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKD--TGQVYAMKVLRKSDMIK-------------------------RNQIAHVRAERD   53 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECC--CCCEEEEEEEEHHHHhh-------------------------ccHHHHHHHHHH
Confidence            479999999999999999999988  78899999997543211                         012345778999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCC
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLK  169 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlk  169 (521)
                      ++..+     +||||+++++++.+++.+|+||||+.|++|.+++...+.+++..++.++.||+.||.|||++||+|||||
T Consensus        54 ~l~~~-----~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlk  128 (350)
T cd05573          54 ILADA-----DSPWIVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIK  128 (350)
T ss_pred             HHHhc-----CCCCccchhhheecCCeEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCC
Confidence            99988     8999999999999999999999999999999999988899999999999999999999999999999999


Q ss_pred             CCcEEEeeCCCCCCEEEeecCCCccCCCCC------------------------------CcccccCCcccccccccccC
Q 009980          170 PENCLFLNDREDSPLKIMDFGLSSVEGYTD------------------------------PVVGLFGSIDYVSPEALLQD  219 (521)
Q Consensus       170 p~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~------------------------------~~~~~~gt~~y~aPE~~~~~  219 (521)
                      |+|||+   +.++.+||+|||++.......                              ......||+.|+|||++.+.
T Consensus       129 p~NIll---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  205 (350)
T cd05573         129 PDNILI---DADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGT  205 (350)
T ss_pred             HHHeEE---CCCCCEEeecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCC
Confidence            999999   778899999999997644322                              12345699999999999999


Q ss_pred             CCCchhhhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCC-HHHHHc
Q 009980          220 RITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPS-AQELLN  298 (521)
Q Consensus       220 ~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t-~~~~l~  298 (521)
                      .++.++|||||||++|+|++|+.||...+..+....+.........+....+|+++.+||.+||. ||.+||+ +.++++
T Consensus       206 ~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~  284 (350)
T cd05573         206 PYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKS  284 (350)
T ss_pred             CCCCceeeEecchhhhhhccCCCCCCCCCHHHHHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhc
Confidence            99999999999999999999999999988877777777632222222224479999999999997 9999999 999999


Q ss_pred             CCcccCC
Q 009980          299 HPWVIGD  305 (521)
Q Consensus       299 h~~~~~~  305 (521)
                      ||||...
T Consensus       285 hp~~~~~  291 (350)
T cd05573         285 HPFFKGI  291 (350)
T ss_pred             CCCcCCC
Confidence            9999753

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=100.00  E-value=4.9e-47  Score=380.21  Aligned_cols=263  Identities=28%  Similarity=0.413  Sum_probs=223.6

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      .-.++|++.+.||+|+||.||+|+++.  +++.||+|++.+.....                         ......+.+
T Consensus        40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~--~~~~~aiK~~~~~~~~~-------------------------~~~~~~~~~   92 (370)
T cd05596          40 MKAEDFDVIKVIGRGAFGEVQLVRHKS--SKQVYAMKLLSKFEMIK-------------------------RSDSAFFWE   92 (370)
T ss_pred             CCHHHcEEEEEEeeCCCEEEEEEEECC--CCCEEEEEEEEHHHhhh-------------------------hhhHHHHHH
Confidence            345789999999999999999999988  78899999997532211                         012334678


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHR  166 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~  166 (521)
                      |+.+++.+     +||||+++++++.+++.+|+|||||+||+|.+++.. ..+++..+..++.||+.||.|||++||+||
T Consensus        93 e~~il~~~-----~h~~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~-~~l~~~~~~~~~~qi~~aL~~LH~~~ivHr  166 (370)
T cd05596          93 ERDIMAHA-----NSEWIVQLHYAFQDDKYLYMVMEYMPGGDLVNLMSN-YDIPEKWARFYTAEVVLALDAIHSMGFIHR  166 (370)
T ss_pred             HHHHHHhC-----CCCCcceEEEEEecCCEEEEEEcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCeecc
Confidence            99999988     999999999999999999999999999999998765 468999999999999999999999999999


Q ss_pred             cCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC--CcccccCCcccccccccccC----CCCchhhhHHHHHHHHHHHhC
Q 009980          167 DLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD--PVVGLFGSIDYVSPEALLQD----RITSKSDMWSLGVILYILLSG  240 (521)
Q Consensus       167 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~----~~~~~~DiwslG~il~~ll~g  240 (521)
                      ||||+|||+   +.++.+||+|||++.......  .....+||+.|+|||++.+.    .++.++|||||||++|+|++|
T Consensus       167 DLkp~NILl---~~~~~~kL~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG  243 (370)
T cd05596         167 DVKPDNMLL---DKSGHLKLADFGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG  243 (370)
T ss_pred             CCCHHHEEE---cCCCCEEEEeccceeeccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhC
Confidence            999999999   778899999999997654322  22345799999999998653    378899999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCC--CCCHHHHHcCCcccCC
Q 009980          241 YPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNR--RPSAQELLNHPWVIGD  305 (521)
Q Consensus       241 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~--R~t~~~~l~h~~~~~~  305 (521)
                      .+||.+.+.......+.........+....+|.++++||.+||..+|.+  |+|+.++++||||.+.
T Consensus       244 ~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~~  310 (370)
T cd05596         244 DTPFYADSLVGTYSKIMDHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKND  310 (370)
T ss_pred             CCCcCCCCHHHHHHHHHcCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcccCCC
Confidence            9999998888888888776543333333468999999999999999988  9999999999999864

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-48  Score=373.74  Aligned_cols=264  Identities=30%  Similarity=0.543  Sum_probs=238.9

Q ss_pred             cccccceeec--ccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHH
Q 009980            6 RKLTDEYEVT--DILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDAL   83 (521)
Q Consensus         6 ~~~~~~Y~~~--~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (521)
                      -.|..-|+|.  ++||+|.||+||-|+++.  +|+.||||++.|.....                          ..+..
T Consensus       558 vd~stvYQif~devLGSGQFG~VYgg~hRk--tGrdVAvKvIdKlrFp~--------------------------kqesq  609 (888)
T KOG4236|consen  558 VDISTVYQIFADEVLGSGQFGTVYGGKHRK--TGRDVAVKVIDKLRFPT--------------------------KQESQ  609 (888)
T ss_pred             hhHHHHHHhhhHhhccCCcceeeecceecc--cCceeeeeeeecccCCC--------------------------chHHH
Confidence            3455567774  799999999999999999  89999999998755432                          22466


Q ss_pred             HHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC
Q 009980           84 LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIV--AQERYMEVGAAAVIRQIAEGLAALHQA  161 (521)
Q Consensus        84 ~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~--~~~~~~~~~~~~i~~qil~al~~lH~~  161 (521)
                      +.+|+.+|+++     +||.||.+.-.|++.+.++.|||-+.| +..+.|.  +.++++|...+.++.||+.||.|||-+
T Consensus       610 lR~EVaILq~l-----~HPGiV~le~M~ET~ervFVVMEKl~G-DMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~k  683 (888)
T KOG4236|consen  610 LRNEVAILQNL-----HHPGIVNLECMFETPERVFVVMEKLHG-DMLEMILSSEKGRLPERITKFLVTQILVALRYLHFK  683 (888)
T ss_pred             HHHHHHHHHhc-----CCCCeeEEEEeecCCceEEEEehhhcc-hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhc
Confidence            89999999999     999999999999999999999999976 6656654  457899999999999999999999999


Q ss_pred             CCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCC
Q 009980          162 NIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGY  241 (521)
Q Consensus       162 ~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~  241 (521)
                      +|+|+||||+|||+.+.+.-..+||||||+|+..+......+.+|||.|+|||++.++.|+..-|+||+|||+|.-++|.
T Consensus       684 nIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGT  763 (888)
T KOG4236|consen  684 NIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGT  763 (888)
T ss_pred             ceeeccCCchheeeccCCCCCceeeccccceeecchhhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEeccc
Confidence            99999999999999877777899999999999998888888889999999999999999999999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCC
Q 009980          242 PPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGD  305 (521)
Q Consensus       242 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~  305 (521)
                      .||..  .+++..+|.+..+-+|...|+.+|+++.+||..+|++.-.+|.|..+.|.|||+++.
T Consensus       764 FPFNE--dEdIndQIQNAaFMyPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~y  825 (888)
T KOG4236|consen  764 FPFNE--DEDINDQIQNAAFMYPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDY  825 (888)
T ss_pred             ccCCC--ccchhHHhhccccccCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhcc
Confidence            99954  456788899999999999999999999999999999999999999999999999764

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=100.00  E-value=1.1e-46  Score=371.77  Aligned_cols=257  Identities=26%  Similarity=0.424  Sum_probs=220.6

Q ss_pred             ceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHH
Q 009980           11 EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILV   90 (521)
Q Consensus        11 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   90 (521)
                      +|++.+.||+|+||.||+|+++.  +++.||||++.+.....                         ......+..|+.+
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~--~~~~~avK~~~~~~~~~-------------------------~~~~~~~~~e~~~   53 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKG--TDELYAIKILKKDVIIQ-------------------------DDDVECTMVEKRV   53 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECC--CCCEEEEEEEEHHHhhh-------------------------hhHHHHHHHHHHH
Confidence            58999999999999999999987  78899999997532211                         0112345677777


Q ss_pred             HHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCC
Q 009980           91 MRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKP  170 (521)
Q Consensus        91 l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp  170 (521)
                      +..+    ..|++|+++++++.+.+.+|+||||++||+|.+++...+.+++..+..++.||+.||.|||++||+||||||
T Consensus        54 l~~~----~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp  129 (324)
T cd05587          54 LALP----GKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKL  129 (324)
T ss_pred             HHhc----CCCCceeeeEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCH
Confidence            7776    244568899999999999999999999999999998888899999999999999999999999999999999


Q ss_pred             CcEEEeeCCCCCCEEEeecCCCccCCC-CCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCc
Q 009980          171 ENCLFLNDREDSPLKIMDFGLSSVEGY-TDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSN  249 (521)
Q Consensus       171 ~Nil~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~  249 (521)
                      +|||+   +.++.+||+|||++..... .......+||+.|+|||++.+..++.++||||+||++|+|++|++||.+.+.
T Consensus       130 ~Nill---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~  206 (324)
T cd05587         130 DNVML---DAEGHIKIADFGMCKENIFGGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDE  206 (324)
T ss_pred             HHeEE---cCCCCEEEeecCcceecCCCCCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH
Confidence            99999   7778999999999874322 2223445799999999999998999999999999999999999999999888


Q ss_pred             HHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCH-----HHHHcCCcccCC
Q 009980          250 RQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSA-----QELLNHPWVIGD  305 (521)
Q Consensus       250 ~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~-----~~~l~h~~~~~~  305 (521)
                      .+....+......++    ..+++++++++.+||..||.+|+++     .++++||||...
T Consensus       207 ~~~~~~i~~~~~~~~----~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~  263 (324)
T cd05587         207 DELFQSIMEHNVSYP----KSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRI  263 (324)
T ss_pred             HHHHHHHHcCCCCCC----CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence            888888887766554    4589999999999999999999986     899999999753

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=8.6e-48  Score=372.12  Aligned_cols=257  Identities=30%  Similarity=0.474  Sum_probs=232.1

Q ss_pred             ccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEI   88 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   88 (521)
                      .++|..++++|+|+||.+++++++.  ..+.||+|.+.-.....+                          .+....+|+
T Consensus         3 m~~Ye~~~~iG~GafG~a~lvrhk~--~~~~~vlK~I~l~~~t~~--------------------------~r~~A~~E~   54 (426)
T KOG0589|consen    3 MDNYEVLRQVGRGAFGSALLVRHKS--DDKLYVLKKINLEKLTEP--------------------------ERRSAIQEM   54 (426)
T ss_pred             cchhhhhhhcCccccchhhhhhhcc--CCceEEEEEEeccccCch--------------------------hhHHHHHHH
Confidence            4689999999999999999999998  778999999986554331                          123568899


Q ss_pred             HHHHHHhhccCCCCCccceeEEEEeCCe-EEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           89 LVMRKIVENVSPHPNVIDLYDVYEDQNG-VHLILELCSGGELFDRIVAQE--RYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        89 ~~l~~l~~~~~~hpniv~~~~~~~~~~~-~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      .++.++     .|||||.+.+.|..++. .+|||+||+||+|.+.|.+..  .++|+.+..++.|++.|+.|||+++|+|
T Consensus        55 ~lis~~-----~hP~iv~y~ds~~~~~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLH  129 (426)
T KOG0589|consen   55 DLLSKL-----LHPNIVEYKDSFEEDGQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLH  129 (426)
T ss_pred             HHHHhc-----cCCCeeeeccchhcCCceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhc
Confidence            999998     99999999999999988 999999999999999997653  6999999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC-CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCC
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF  244 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf  244 (521)
                      ||||+.|||+   ..++.|+|+|||+|+...+.. ...+..|||.||+||++.+.+|+.++|||||||++|+|++-+++|
T Consensus       130 RDlK~~Nifl---tk~~~VkLgDfGlaK~l~~~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF  206 (426)
T KOG0589|consen  130 RDLKCANIFL---TKDKKVKLGDFGLAKILNPEDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAF  206 (426)
T ss_pred             ccchhhhhhc---cccCceeecchhhhhhcCCchhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhccccc
Confidence            9999999999   777889999999999887765 566778999999999999999999999999999999999999999


Q ss_pred             CCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccC
Q 009980          245 IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIG  304 (521)
Q Consensus       245 ~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~  304 (521)
                      .+.+.......|..+...+.+   ...|.+++.+|..||..+|..||++.++|.+|.+..
T Consensus       207 ~a~~m~~Li~ki~~~~~~Plp---~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~l~~  263 (426)
T KOG0589|consen  207 KASNMSELILKINRGLYSPLP---SMYSSELRSLVKSMLRKNPEHRPSALELLRRPHLLR  263 (426)
T ss_pred             CccchHHHHHHHhhccCCCCC---ccccHHHHHHHHHHhhcCCccCCCHHHHhhChhhhh
Confidence            999999999999998854433   567999999999999999999999999999998763

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=100.00  E-value=6.5e-47  Score=378.86  Aligned_cols=264  Identities=29%  Similarity=0.434  Sum_probs=221.9

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      ....++|++.+.||+|+||.||+|+++.  +++.||+|++.+.....                         ......+.
T Consensus        39 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~--~~~~~aiK~~~~~~~~~-------------------------~~~~~~~~   91 (370)
T cd05621          39 QMKAEDYDVVKVIGRGAFGEVQLVRHKS--SQKVYAMKLLSKFEMIK-------------------------RSDSAFFW   91 (370)
T ss_pred             CCCHHHCeEEEEEEecCCeEEEEEEECC--CCCEEEEEEEEHHHhhh-------------------------hhhHHHHH
Confidence            3456799999999999999999999988  78899999997532211                         01234467


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      +|+.+++.+     +||||+++++++.+++.+|+|||||+||+|.+++.. ..+++..+..++.||+.||.|||++||+|
T Consensus        92 ~e~~i~~~~-----~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~-~~~~~~~~~~~~~qil~aL~~LH~~~IvH  165 (370)
T cd05621          92 EERDIMAFA-----NSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSN-YDVPEKWAKFYTAEVVLALDAIHSMGLIH  165 (370)
T ss_pred             HHHHHHHhC-----CCCCEeeEEEEEEcCCEEEEEEcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence            889988888     999999999999999999999999999999998865 46899999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC--CcccccCCcccccccccccCC----CCchhhhHHHHHHHHHHHh
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD--PVVGLFGSIDYVSPEALLQDR----ITSKSDMWSLGVILYILLS  239 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~----~~~~~DiwslG~il~~ll~  239 (521)
                      |||||+|||+   +.++.+||+|||+|.......  .....+||+.|+|||++.+..    ++.++||||+||++|+|++
T Consensus       166 rDLKp~NILl---~~~~~~kL~DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~  242 (370)
T cd05621         166 RDVKPDNMLL---DKHGHLKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLV  242 (370)
T ss_pred             cCCCHHHEEE---CCCCCEEEEecccceecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHh
Confidence            9999999999   778899999999998654322  123557999999999997543    7889999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCC--CCCHHHHHcCCcccCC
Q 009980          240 GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNR--RPSAQELLNHPWVIGD  305 (521)
Q Consensus       240 g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~--R~t~~~~l~h~~~~~~  305 (521)
                      |.+||.+.+.......+......+..+....++..+++++.+||..+|.+  |+|+.++++||||...
T Consensus       243 G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~  310 (370)
T cd05621         243 GDTPFYADSLVGTYSKIMDHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKND  310 (370)
T ss_pred             CCCCCCCCCHHHHHHHHHhCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccCCC
Confidence            99999998888888888765443333333468999999999999865544  8999999999999764

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=100.00  E-value=4.5e-47  Score=379.97  Aligned_cols=260  Identities=28%  Similarity=0.483  Sum_probs=220.5

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ++|++.+.||+|+||.||+|+++.  +++.||||++++.....                         ......+.+|+.
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~--~~~~~aiK~~~~~~~~~-------------------------~~~~~~~~~e~~   53 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKD--TGHIYAMKILRKADMLE-------------------------KEQVAHIRAERD   53 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECC--CCCEEEEEEEEHHHHhh-------------------------hhhHHHHHHHHH
Confidence            579999999999999999999988  78899999997532111                         112345778999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCC
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLK  169 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlk  169 (521)
                      ++..+     +||||+++++.+.+.+.+|+|||||+||+|.+++.+.+.+++..++.++.|++.||.|||++||+|||||
T Consensus        54 ~l~~l-----~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLk  128 (360)
T cd05627          54 ILVEA-----DGAWVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIK  128 (360)
T ss_pred             HHHhC-----CCCCEeeEEEEEEcCCEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCC
Confidence            99888     9999999999999999999999999999999999988899999999999999999999999999999999


Q ss_pred             CCcEEEeeCCCCCCEEEeecCCCccCCCCC------------------------------------CcccccCCcccccc
Q 009980          170 PENCLFLNDREDSPLKIMDFGLSSVEGYTD------------------------------------PVVGLFGSIDYVSP  213 (521)
Q Consensus       170 p~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~------------------------------------~~~~~~gt~~y~aP  213 (521)
                      |+|||+   +.++.++|+|||++.......                                    .....+||+.|+||
T Consensus       129 p~NIli---~~~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP  205 (360)
T cd05627         129 PDNLLL---DAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAP  205 (360)
T ss_pred             HHHEEE---CCCCCEEEeeccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCH
Confidence            999999   778899999999986432110                                    01234799999999


Q ss_pred             cccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCC--
Q 009980          214 EALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRP--  291 (521)
Q Consensus       214 E~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~--  291 (521)
                      |++.+..++.++|||||||++|+|++|++||.+.+.......+.........+....+++++++||.+|+ .||.+|+  
T Consensus       206 E~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~  284 (360)
T cd05627         206 EVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFC-TDSENRIGS  284 (360)
T ss_pred             HHHcCCCCCCcceeccccceeeecccCCCCCCCCCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhc-cChhhcCCC
Confidence            9999999999999999999999999999999998888887777754332222222347999999999987 4999998  


Q ss_pred             -CHHHHHcCCcccCC
Q 009980          292 -SAQELLNHPWVIGD  305 (521)
Q Consensus       292 -t~~~~l~h~~~~~~  305 (521)
                       ++.++++||||.+.
T Consensus       285 ~~~~ei~~hp~f~~~  299 (360)
T cd05627         285 NGVEEIKSHPFFEGV  299 (360)
T ss_pred             CCHHHHhcCCCCCCC
Confidence             58999999999864

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=1.7e-46  Score=373.11  Aligned_cols=260  Identities=27%  Similarity=0.464  Sum_probs=211.0

Q ss_pred             ceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHH
Q 009980           11 EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILV   90 (521)
Q Consensus        11 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   90 (521)
                      +|++.+.||+|+||.||+|+++.  +++.||||.+.......                          .....+.+|+.+
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~--~~~~vaiK~~~~~~~~~--------------------------~~~~~~~~E~~~   52 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTH--TGEKVAIKKINDVFEHV--------------------------SDATRILREIKL   52 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECC--CCCEEEEEEechhhccc--------------------------hhHHHHHHHHHH
Confidence            69999999999999999999987  78899999986421110                          112347789999


Q ss_pred             HHHHhhccCCCCCccceeEEEEeC-----CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           91 MRKIVENVSPHPNVIDLYDVYEDQ-----NGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        91 l~~l~~~~~~hpniv~~~~~~~~~-----~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      ++++     +||||+++++++...     ..+|+|||||. ++|.+++.....+++..+..++.||+.||.|||++||+|
T Consensus        53 l~~l-----~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH  126 (338)
T cd07859          53 LRLL-----RHPDIVEIKHIMLPPSRREFKDIYVVFELME-SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFH  126 (338)
T ss_pred             HHhC-----CCCCEeeecceEeccCCCCCceEEEEEecCC-CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence            9998     999999999988543     35899999995 689999988888999999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC----CcccccCCccccccccccc--CCCCchhhhHHHHHHHHHHHh
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD----PVVGLFGSIDYVSPEALLQ--DRITSKSDMWSLGVILYILLS  239 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~~ll~  239 (521)
                      |||||+|||+   +.++.+||+|||+++......    ......||+.|+|||++.+  ..++.++||||+||++|+|++
T Consensus       127 ~dlkp~NIll---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~t  203 (338)
T cd07859         127 RDLKPKNILA---NADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT  203 (338)
T ss_pred             CCCCHHHeEE---CCCCcEEEccCccccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHc
Confidence            9999999999   778899999999997542211    1134579999999999865  678999999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHHc---------------------------CCCCCchhhhhccCHHHHHHHHHhccCCCCCCCC
Q 009980          240 GYPPFIAQSNRQKQQMIMA---------------------------GEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPS  292 (521)
Q Consensus       240 g~~pf~~~~~~~~~~~i~~---------------------------~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t  292 (521)
                      |++||.+.+.......+..                           .........++.+++.+.++|.+||..||++|||
T Consensus       204 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt  283 (338)
T cd07859         204 GKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPT  283 (338)
T ss_pred             CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCC
Confidence            9999987664333221111                           1111112233567889999999999999999999


Q ss_pred             HHHHHcCCcccCCCC
Q 009980          293 AQELLNHPWVIGDSA  307 (521)
Q Consensus       293 ~~~~l~h~~~~~~~~  307 (521)
                      ++++|+||||.+...
T Consensus       284 ~~e~l~hp~f~~~~~  298 (338)
T cd07859         284 AEEALADPYFKGLAK  298 (338)
T ss_pred             HHHHhcCchhhhcCc
Confidence            999999999976444

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=100.00  E-value=2.8e-46  Score=365.48  Aligned_cols=259  Identities=26%  Similarity=0.410  Sum_probs=207.8

Q ss_pred             ccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEI   88 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   88 (521)
                      .++|++.+.||+|+||.||+|+++.  +++.||||++......                           .......+|+
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~--~~~~~aiK~~~~~~~~---------------------------~~~~~~~~E~   54 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYKGKSKV--NGKLVALKVIRLQEEE---------------------------GTPFTAIREA   54 (303)
T ss_pred             cccceEeeeEEecCCEEEEEEEECC--CCCEEEEEEecccccc---------------------------ccchhHHHHH
Confidence            4789999999999999999999987  7889999998643211                           1122367899


Q ss_pred             HHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecc
Q 009980           89 LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQANIVHRD  167 (521)
Q Consensus        89 ~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~~~i~H~d  167 (521)
                      .+++.+     +||||+++++++.++...|+||||+. ++|.+++... +.+++..++.++.||+.||.|||++||+|||
T Consensus        55 ~~l~~l-----~h~niv~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~d  128 (303)
T cd07869          55 SLLKGL-----KHANIVLLHDIIHTKETLTLVFEYVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRD  128 (303)
T ss_pred             HHHhhC-----CCCCcCeEEEEEecCCeEEEEEECCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence            999998     99999999999999999999999996 5787777654 5689999999999999999999999999999


Q ss_pred             CCCCcEEEeeCCCCCCEEEeecCCCccCCC-CCCcccccCCccccccccccc-CCCCchhhhHHHHHHHHHHHhCCCCCC
Q 009980          168 LKPENCLFLNDREDSPLKIMDFGLSSVEGY-TDPVVGLFGSIDYVSPEALLQ-DRITSKSDMWSLGVILYILLSGYPPFI  245 (521)
Q Consensus       168 lkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~ll~g~~pf~  245 (521)
                      |||+|||+   +.++.+||+|||++..... ........||+.|+|||++.+ ..++.++||||+||++|+|++|.+||.
T Consensus       129 lkp~Nill---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~  205 (303)
T cd07869         129 LKPQNLLI---SDTGELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFP  205 (303)
T ss_pred             CCHHHEEE---CCCCCEEECCCCcceeccCCCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence            99999999   7788899999999875332 222344568999999999865 457899999999999999999999998


Q ss_pred             CCCcH-HHHHHHHcCCCCCc--------------------------hhhhh--ccCHHHHHHHHHhccCCCCCCCCHHHH
Q 009980          246 AQSNR-QKQQMIMAGEFSFY--------------------------EQTWK--NISSSAKQLISSLLTVDPNRRPSAQEL  296 (521)
Q Consensus       246 ~~~~~-~~~~~i~~~~~~~~--------------------------~~~~~--~~s~~~~~li~~~l~~dp~~R~t~~~~  296 (521)
                      +.... +....+........                          ...|.  .+++.+++|+.+||+.||.+|||+.++
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~  285 (303)
T cd07869         206 GMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAA  285 (303)
T ss_pred             CCccHHHHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHH
Confidence            75432 22222211000000                          00111  245789999999999999999999999


Q ss_pred             HcCCcccCC
Q 009980          297 LNHPWVIGD  305 (521)
Q Consensus       297 l~h~~~~~~  305 (521)
                      |+||||...
T Consensus       286 l~h~~f~~~  294 (303)
T cd07869         286 LSHEYFSDL  294 (303)
T ss_pred             hcCcccccC
Confidence            999999754

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=100.00  E-value=6.2e-47  Score=373.63  Aligned_cols=251  Identities=29%  Similarity=0.464  Sum_probs=217.7

Q ss_pred             ccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHHh
Q 009980           16 DILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIV   95 (521)
Q Consensus        16 ~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~   95 (521)
                      +.||+|+||.||+|.++.  +++.||+|++.+.....                         ......+.+|+.+++.+ 
T Consensus         1 ~~lG~G~~g~V~~~~~~~--~~~~~a~K~~~~~~~~~-------------------------~~~~~~~~~e~~~l~~~-   52 (325)
T cd05594           1 KLLGKGTFGKVILVKEKA--TGRYYAMKILKKEVIVA-------------------------KDEVAHTLTENRVLQNS-   52 (325)
T ss_pred             CeeeeCCCEEEEEEEECC--CCCEEEEEEEEHHHhhh-------------------------hhHHHHHHHHHHHHHhC-
Confidence            469999999999999987  78899999997532211                         01123456788888887 


Q ss_pred             hccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeccCCCCcEE
Q 009980           96 ENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ-ANIVHRDLKPENCL  174 (521)
Q Consensus        96 ~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~-~~i~H~dlkp~Nil  174 (521)
                          +||||+++++++..++.+|+||||+.||+|.+++...+.+++..+..++.||+.||.|||+ +||+||||||+|||
T Consensus        53 ----~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIl  128 (325)
T cd05594          53 ----RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLM  128 (325)
T ss_pred             ----CCCCCCceEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEE
Confidence                9999999999999999999999999999999999888889999999999999999999998 79999999999999


Q ss_pred             EeeCCCCCCEEEeecCCCccCCC-CCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCcHHHH
Q 009980          175 FLNDREDSPLKIMDFGLSSVEGY-TDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQ  253 (521)
Q Consensus       175 ~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~  253 (521)
                      +   +.++.+||+|||+++.... .......+||+.|+|||++.+..++.++||||+||++|+|++|..||.+.+.....
T Consensus       129 l---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~  205 (325)
T cd05594         129 L---DKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF  205 (325)
T ss_pred             E---CCCCCEEEecCCCCeecCCCCcccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHH
Confidence            9   7788999999999875322 22233457999999999999889999999999999999999999999988888787


Q ss_pred             HHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCC-----CHHHHHcCCcccCC
Q 009980          254 QMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRP-----SAQELLNHPWVIGD  305 (521)
Q Consensus       254 ~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~-----t~~~~l~h~~~~~~  305 (521)
                      ..+......++    ..+++++.+||.+||..||.+|+     ++.++++||||.+.
T Consensus       206 ~~i~~~~~~~p----~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~  258 (325)
T cd05594         206 ELILMEEIRFP----RTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGI  258 (325)
T ss_pred             HHHhcCCCCCC----CCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCC
Confidence            77777666554    45899999999999999999997     99999999999763

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=100.00  E-value=2.2e-47  Score=353.12  Aligned_cols=257  Identities=31%  Similarity=0.469  Sum_probs=217.3

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      +...-.|.-.+++|+|+||.||+|+...  ++..||||.+-....                                .-.
T Consensus        20 ~~~~i~~~~~~liG~GsFg~Vyq~~~~e--~~~~vAIKKv~~d~r--------------------------------~kn   65 (364)
T KOG0658|consen   20 KKVEISYEAVRLIGSGSFGVVYQAKLRE--TEEEVAIKKVLQDKR--------------------------------YKN   65 (364)
T ss_pred             cceEEEEEeeEEEeecccceEEEEEEcC--CCceeEEEEecCCCC--------------------------------cCc
Confidence            3455578889999999999999999998  688999999753221                                124


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCC-----eEEEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHH
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQN-----GVHLILELCSGGELFDRIVA----QERYMEVGAAAVIRQIAEGLA  156 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~-----~~~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qil~al~  156 (521)
                      +|+.+|+.+     +|||||++..+|....     +..+||||++. +|.+.+..    +.+++...++-+..||++||+
T Consensus        66 rEl~im~~l-----~HpNIV~L~~~f~~~~~~d~~~lnlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~  139 (364)
T KOG0658|consen   66 RELQIMRKL-----DHPNIVRLLYFFSSSTESDEVYLNLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLA  139 (364)
T ss_pred             HHHHHHHhc-----CCcCeeeEEEEEEecCCCchhHHHHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHH
Confidence            699999988     9999999999986432     34489999976 99988874    578999999999999999999


Q ss_pred             HHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccC-CCCchhhhHHHHHHHH
Q 009980          157 ALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQD-RITSKSDMWSLGVILY  235 (521)
Q Consensus       157 ~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~  235 (521)
                      |||+.||+||||||+|+|+  +...+.+||||||.|+....+.+..+...|.+|+|||.+.+. .|+.+.||||.||++.
T Consensus       140 yLh~~~IcHRDIKPqNlLv--D~~tg~LKicDFGSAK~L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~a  217 (364)
T KOG0658|consen  140 YLHSHGICHRDIKPQNLLV--DPDTGVLKICDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMA  217 (364)
T ss_pred             HHHhcCcccCCCChheEEE--cCCCCeEEeccCCcceeeccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHH
Confidence            9999999999999999999  455699999999999998888888888999999999998764 6899999999999999


Q ss_pred             HHHhCCCCCCCCCcHHHHHHHHcCCCC--------------------Cchh-----hhhccCHHHHHHHHHhccCCCCCC
Q 009980          236 ILLSGYPPFIAQSNRQKQQMIMAGEFS--------------------FYEQ-----TWKNISSSAKQLISSLLTVDPNRR  290 (521)
Q Consensus       236 ~ll~g~~pf~~~~~~~~~~~i~~~~~~--------------------~~~~-----~~~~~s~~~~~li~~~l~~dp~~R  290 (521)
                      ||+-|++.|.|.+....+..|.+--..                    +...     ....+++++.+|+.++|..+|.+|
T Consensus       218 ELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R  297 (364)
T KOG0658|consen  218 ELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKR  297 (364)
T ss_pred             HHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhc
Confidence            999999999998887776665432111                    1111     224579999999999999999999


Q ss_pred             CCHHHHHcCCcccC
Q 009980          291 PSAQELLNHPWVIG  304 (521)
Q Consensus       291 ~t~~~~l~h~~~~~  304 (521)
                      .|+.++|.||||..
T Consensus       298 ~~~~~~l~h~fFde  311 (364)
T KOG0658|consen  298 LSALEALAHPFFDE  311 (364)
T ss_pred             CCHHHHhcchhhHH
Confidence            99999999999963

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=100.00  E-value=1.7e-46  Score=369.92  Aligned_cols=252  Identities=23%  Similarity=0.408  Sum_probs=217.0

Q ss_pred             ccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHHh
Q 009980           16 DILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIV   95 (521)
Q Consensus        16 ~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~   95 (521)
                      +.||+|+||.||+|+++.  +++.||||++.+.....                         ......+..|..++..+ 
T Consensus         1 ~~lG~G~~g~Vy~~~~~~--~~~~~aiK~~~~~~~~~-------------------------~~~~~~~~~e~~il~~~-   52 (321)
T cd05591           1 KVLGKGSFGKVMLAELKG--TDEVYAIKVLKKDVILQ-------------------------DDDVDCTMTEKRILALA-   52 (321)
T ss_pred             CccccCCCeEEEEEEECC--CCCEEEEEEEeHHHhhh-------------------------hhHHHHHHHHHHHHHhc-
Confidence            469999999999999987  78899999997532211                         01123355677776654 


Q ss_pred             hccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q 009980           96 ENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLF  175 (521)
Q Consensus        96 ~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~  175 (521)
                         .+||||+++++++.+++.+|+||||++||+|...+...+.+++..+..++.||+.||.|||++||+||||||+||++
T Consensus        53 ---~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill  129 (321)
T cd05591          53 ---AKHPFLTALHCCFQTKDRLFFVMEYVNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILL  129 (321)
T ss_pred             ---cCCCCccceeeEEEcCCeEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE
Confidence               38999999999999999999999999999999999888899999999999999999999999999999999999999


Q ss_pred             eeCCCCCCEEEeecCCCccCCCC-CCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCcHHHHH
Q 009980          176 LNDREDSPLKIMDFGLSSVEGYT-DPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQ  254 (521)
Q Consensus       176 ~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~  254 (521)
                         +.++.+||+|||++...... ......+||+.|+|||++.+..++.++||||+||++|+|++|++||.+.+..+...
T Consensus       130 ---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~  206 (321)
T cd05591         130 ---DAEGHCKLADFGMCKEGILNGVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFE  206 (321)
T ss_pred             ---CCCCCEEEeecccceecccCCccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHH
Confidence               77889999999998753222 22344579999999999998899999999999999999999999999999888888


Q ss_pred             HHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCC-------CHHHHHcCCcccCC
Q 009980          255 MIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRP-------SAQELLNHPWVIGD  305 (521)
Q Consensus       255 ~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~-------t~~~~l~h~~~~~~  305 (521)
                      .+..+...++    ..+++++.++|.+||..||.+||       ++.++++||||...
T Consensus       207 ~i~~~~~~~p----~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~  260 (321)
T cd05591         207 SILHDDVLYP----VWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEI  260 (321)
T ss_pred             HHHcCCCCCC----CCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCCC
Confidence            8888766544    34789999999999999999999       99999999999653

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=100.00  E-value=2.3e-46  Score=369.23  Aligned_cols=257  Identities=25%  Similarity=0.411  Sum_probs=221.0

Q ss_pred             ceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHH
Q 009980           11 EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILV   90 (521)
Q Consensus        11 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   90 (521)
                      +|++.+.||+|+||.||+|+++.  +++.||||++.+.....                         .........|..+
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~--~~~~~aiK~~~~~~~~~-------------------------~~~~~~~~~e~~~   53 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKG--TDELYAIKILKKDVVIQ-------------------------DDDVECTMVEKRV   53 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECC--CCCEEEEEEEEHHHhhh-------------------------hhHHHHHHHHHHH
Confidence            58999999999999999999987  78899999997532211                         0112234556666


Q ss_pred             HHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCC
Q 009980           91 MRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKP  170 (521)
Q Consensus        91 l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp  170 (521)
                      +..+    ..||+|+++++++.+.+.+|+||||++||+|.+.+...+.+++..+..++.||+.||.|||++||+||||||
T Consensus        54 l~~~----~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp  129 (323)
T cd05616          54 LALS----GKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKL  129 (323)
T ss_pred             HHhc----cCCCeEeeEEEEEecCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCH
Confidence            6554    478999999999999999999999999999999998888999999999999999999999999999999999


Q ss_pred             CcEEEeeCCCCCCEEEeecCCCccCCC-CCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCc
Q 009980          171 ENCLFLNDREDSPLKIMDFGLSSVEGY-TDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSN  249 (521)
Q Consensus       171 ~Nil~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~  249 (521)
                      +|||+   +.++.+||+|||+++.... .......+||+.|+|||++.+..++.++||||+||++|+|++|++||.+.+.
T Consensus       130 ~Nill---~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~  206 (323)
T cd05616         130 DNVML---DSEGHIKIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE  206 (323)
T ss_pred             HHeEE---CCCCcEEEccCCCceecCCCCCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCH
Confidence            99999   7788999999999975432 2223445799999999999999999999999999999999999999999888


Q ss_pred             HHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCH-----HHHHcCCcccCC
Q 009980          250 RQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSA-----QELLNHPWVIGD  305 (521)
Q Consensus       250 ~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~-----~~~l~h~~~~~~  305 (521)
                      ......+......++    ..+++++++++.+||+.||.+|+++     .++++||||...
T Consensus       207 ~~~~~~i~~~~~~~p----~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~  263 (323)
T cd05616         207 DELFQSIMEHNVAYP----KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI  263 (323)
T ss_pred             HHHHHHHHhCCCCCC----CcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCC
Confidence            888888888776654    4589999999999999999999984     899999999753

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=100.00  E-value=2.3e-46  Score=369.92  Aligned_cols=251  Identities=24%  Similarity=0.420  Sum_probs=210.6

Q ss_pred             ccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHHh
Q 009980           16 DILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIV   95 (521)
Q Consensus        16 ~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~   95 (521)
                      +.||+|+||.||+|+++.  +++.||||++++.....                         ......+..|..++.++ 
T Consensus         1 ~~lG~G~~g~V~~~~~~~--~~~~~aiK~i~~~~~~~-------------------------~~~~~~~~~e~~il~~~-   52 (329)
T cd05588           1 RVIGRGSYAKVLLVELKK--TRRIYAMKVIKKELVND-------------------------DEDIDWVQTEKHVFETA-   52 (329)
T ss_pred             CeEeeCCCeEEEEEEECC--CCCEEEEEEEEHHHhhh-------------------------hhHHHHHHHHHHHHHhc-
Confidence            469999999999999988  78899999997643211                         01123466788877776 


Q ss_pred             hccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q 009980           96 ENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLF  175 (521)
Q Consensus        96 ~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~  175 (521)
                         .+||||+++++++.+.+.+|+|||||+||+|.+++...+++++..+..++.||+.||.|||++||+||||||+||++
T Consensus        53 ---~~hp~Iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili  129 (329)
T cd05588          53 ---SNHPFLVGLHSCFQTESRLFFVIEFVSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLL  129 (329)
T ss_pred             ---cCCCCCCceEEEEEcCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE
Confidence               47999999999999999999999999999999999888899999999999999999999999999999999999999


Q ss_pred             eeCCCCCCEEEeecCCCccC-CCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCC------
Q 009980          176 LNDREDSPLKIMDFGLSSVE-GYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQS------  248 (521)
Q Consensus       176 ~~~~~~~~~kl~Dfg~a~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~------  248 (521)
                         +.++.+||+|||+++.. .........+||+.|+|||++.+..++.++|+||+||++|+|++|+.||....      
T Consensus       130 ---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~  206 (329)
T cd05588         130 ---DAEGHIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPD  206 (329)
T ss_pred             ---CCCCCEEECcCccccccccCCCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCccccccccccc
Confidence               77889999999998752 22233345679999999999999899999999999999999999999996321      


Q ss_pred             ---cHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCC------HHHHHcCCcccC
Q 009980          249 ---NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPS------AQELLNHPWVIG  304 (521)
Q Consensus       249 ---~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t------~~~~l~h~~~~~  304 (521)
                         .....+.+.......+    ..++..++++|.+||+.||.+|||      ++++++||||..
T Consensus       207 ~~~~~~~~~~~~~~~~~~p----~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~  267 (329)
T cd05588         207 QNTEDYLFQVILEKQIRIP----RSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRN  267 (329)
T ss_pred             ccchHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCC
Confidence               1223444555544433    457999999999999999999987      799999999964

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=100.00  E-value=2.9e-46  Score=367.09  Aligned_cols=252  Identities=26%  Similarity=0.422  Sum_probs=214.1

Q ss_pred             ccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHHh
Q 009980           16 DILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIV   95 (521)
Q Consensus        16 ~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~   95 (521)
                      +.||+|+||.||+|+++.  ++..||+|++++.....                         .........|..++... 
T Consensus         1 ~~lg~G~~g~V~~~~~~~--~~~~~avK~~~~~~~~~-------------------------~~~~~~~~~e~~~l~~~-   52 (316)
T cd05620           1 KVLGKGSFGKVLLAELKG--KGEYFAVKALKKDVVLI-------------------------DDDVECTMVEKRVLALA-   52 (316)
T ss_pred             CeeeeCCCeEEEEEEECC--CCCEEEEEEEEHHHhhh-------------------------cchHHHHHHHHHHHHhc-
Confidence            479999999999999987  78899999997532210                         01123345566666543 


Q ss_pred             hccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q 009980           96 ENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLF  175 (521)
Q Consensus        96 ~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~  175 (521)
                         .+||||+++++++.+.+.+|+||||+.||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+||++
T Consensus        53 ---~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~  129 (316)
T cd05620          53 ---WENPFLTHLYCTFQTKEHLFFVMEFLNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVML  129 (316)
T ss_pred             ---cCCCCccCeeEEEEeCCEEEEEECCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE
Confidence               38999999999999999999999999999999999888889999999999999999999999999999999999999


Q ss_pred             eeCCCCCCEEEeecCCCccCCC-CCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCcHHHHH
Q 009980          176 LNDREDSPLKIMDFGLSSVEGY-TDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQ  254 (521)
Q Consensus       176 ~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~  254 (521)
                         +.++.++|+|||+++.... .......+||+.|+|||++.+..++.++||||+||++|+|++|..||.+.+..+...
T Consensus       130 ---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~  206 (316)
T cd05620         130 ---DRDGHIKIADFGMCKENVFGDNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFE  206 (316)
T ss_pred             ---CCCCCEEeCccCCCeecccCCCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHH
Confidence               7788999999999874322 222345679999999999999999999999999999999999999999888888777


Q ss_pred             HHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCH-HHHHcCCcccCC
Q 009980          255 MIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSA-QELLNHPWVIGD  305 (521)
Q Consensus       255 ~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~-~~~l~h~~~~~~  305 (521)
                      .+......++    ..++.++++||.+||..||.+||++ +++++||||...
T Consensus       207 ~~~~~~~~~~----~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~~  254 (316)
T cd05620         207 SIRVDTPHYP----RWITKESKDILEKLFERDPTRRLGVVGNIRGHPFFKTI  254 (316)
T ss_pred             HHHhCCCCCC----CCCCHHHHHHHHHHccCCHHHcCCChHHHHcCCCcCCC
Confidence            7776654443    3479999999999999999999998 589999999753

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=100.00  E-value=9.1e-46  Score=366.14  Aligned_cols=262  Identities=23%  Similarity=0.335  Sum_probs=218.1

Q ss_pred             cccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      ..++|++.+.||+|+||.||+|+++.  ++..||+|++.....                           ......+.+|
T Consensus         3 ~~~~y~~~~~lg~G~~g~V~~~~~~~--~~~~~a~k~~~~~~~---------------------------~~~~~~~~~E   53 (331)
T cd06649           3 KDDDFERISELGAGNGGVVTKVQHKP--SGLIMARKLIHLEIK---------------------------PAIRNQIIRE   53 (331)
T ss_pred             CcccceEEEeecCCCCEEEEEEEECC--CCcEEEEEEeecccC---------------------------HHHHHHHHHH
Confidence            46899999999999999999999987  788999999864211                           1123458899


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CCeec
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQA-NIVHR  166 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~-~i~H~  166 (521)
                      +.+++++     +||||+++++++..++.+|+||||++|++|.+++.....+++..+..++.|++.||.|||++ +|+||
T Consensus        54 ~~~l~~l-----~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~  128 (331)
T cd06649          54 LQVLHEC-----NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHR  128 (331)
T ss_pred             HHHHHHC-----CCCCCCeEEEEEEECCEEEEEeecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcC
Confidence            9999998     99999999999999999999999999999999998888899999999999999999999986 69999


Q ss_pred             cCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCC
Q 009980          167 DLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIA  246 (521)
Q Consensus       167 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~  246 (521)
                      ||||+|||+   +.++.+||+|||++...... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||..
T Consensus       129 dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~  204 (331)
T cd06649         129 DVKPSNILV---NSRGEIKLCDFGVSGQLIDS-MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPP  204 (331)
T ss_pred             CCChhhEEE---cCCCcEEEccCccccccccc-ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence            999999999   67788999999998765322 23345699999999999988999999999999999999999999976


Q ss_pred             CCcHHHHHHHHcCCC--------------------------------------------CCchhhhhccCHHHHHHHHHh
Q 009980          247 QSNRQKQQMIMAGEF--------------------------------------------SFYEQTWKNISSSAKQLISSL  282 (521)
Q Consensus       247 ~~~~~~~~~i~~~~~--------------------------------------------~~~~~~~~~~s~~~~~li~~~  282 (521)
                      .+..+....+.....                                            ..+......+++++++||.+|
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  284 (331)
T cd06649         205 PDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKC  284 (331)
T ss_pred             CCHHHHHHHhcccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHH
Confidence            655443322211000                                            000000123688999999999


Q ss_pred             ccCCCCCCCCHHHHHcCCcccCCCC
Q 009980          283 LTVDPNRRPSAQELLNHPWVIGDSA  307 (521)
Q Consensus       283 l~~dp~~R~t~~~~l~h~~~~~~~~  307 (521)
                      |..||++|||+.++++||||+....
T Consensus       285 L~~~P~~Rpt~~ell~h~~~~~~~~  309 (331)
T cd06649         285 LIKNPAERADLKMLMNHTFIKRSEV  309 (331)
T ss_pred             ccCCcccCCCHHHHhcChHHhhccc
Confidence            9999999999999999999986443

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=100.00  E-value=3.6e-46  Score=368.01  Aligned_cols=257  Identities=27%  Similarity=0.445  Sum_probs=218.1

Q ss_pred             eeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHH
Q 009980           12 YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVM   91 (521)
Q Consensus        12 Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l   91 (521)
                      |++.+.||+|+||.||+|.++.  +++.||||++++.....                         ......+.+|+.++
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~--~~~~~aiK~~~~~~~~~-------------------------~~~~~~l~~e~~~~   53 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKK--TGELYAIKALKKGDIIA-------------------------RDEVESLMCEKRIF   53 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECC--CCCEEEEEEEEHHHhhh-------------------------hhHHHHHHHHHHHH
Confidence            7889999999999999999987  78899999997532211                         01123466676665


Q ss_pred             HHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCC
Q 009980           92 RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPE  171 (521)
Q Consensus        92 ~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~  171 (521)
                      ..+  ...+||||+++++++.+.+..|+||||+.|++|...+.. +.+++..+..++.||+.||.|||++||+||||||+
T Consensus        54 ~~~--~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~  130 (324)
T cd05589          54 ETA--NSERHPFLVNLFACFQTEDHVCFVMEYAAGGDLMMHIHT-DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLD  130 (324)
T ss_pred             Hhc--cccCCCChhceeeEEEcCCEEEEEEcCCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHH
Confidence            433  112899999999999999999999999999999887754 57999999999999999999999999999999999


Q ss_pred             cEEEeeCCCCCCEEEeecCCCccCCC-CCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCcH
Q 009980          172 NCLFLNDREDSPLKIMDFGLSSVEGY-TDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNR  250 (521)
Q Consensus       172 Nil~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~  250 (521)
                      ||++   +.++.+||+|||+++.... .......+||+.|+|||.+.+..++.++|||||||++|+|++|+.||.+.+..
T Consensus       131 Nill---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~  207 (324)
T cd05589         131 NLLL---DTEGFVKIADFGLCKEGMGFGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEE  207 (324)
T ss_pred             HeEE---CCCCcEEeCcccCCccCCCCCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHH
Confidence            9999   7788999999999875322 22334567999999999999889999999999999999999999999998888


Q ss_pred             HHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCC-----CHHHHHcCCcccCC
Q 009980          251 QKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRP-----SAQELLNHPWVIGD  305 (521)
Q Consensus       251 ~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~-----t~~~~l~h~~~~~~  305 (521)
                      +....+..+...++    ..+|+.+.++|.+||..||.+||     ++.++++||||...
T Consensus       208 ~~~~~i~~~~~~~p----~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~  263 (324)
T cd05589         208 EVFDSIVNDEVRYP----RFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDI  263 (324)
T ss_pred             HHHHHHHhCCCCCC----CCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCC
Confidence            88888877766544    45799999999999999999999     79999999999753

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=100.00  E-value=7.5e-47  Score=374.04  Aligned_cols=259  Identities=25%  Similarity=0.388  Sum_probs=220.3

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ++|++.+.||+|+||.||+|+++.  +++.||||++++.....                         ......+.+|+.
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~--~~~~~aiK~~~~~~~~~-------------------------~~~~~~~~~e~~   53 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKA--TGDIYAMKVMKKSVLLA-------------------------QETVSFFEEERD   53 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECC--CCCEEEEEEEEHHHhhh-------------------------hhHHHHHHHHHH
Confidence            479999999999999999999988  78899999997532211                         012345778888


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQANIVHRDL  168 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~~~i~H~dl  168 (521)
                      +++.+     +||||+++++++.+.+.+|+||||++||+|.+++... ..+++..+..++.||+.||.|||++||+||||
T Consensus        54 i~~~~-----~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dl  128 (330)
T cd05601          54 ILSIS-----NSPWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDI  128 (330)
T ss_pred             HHHhC-----CCCCCcceeeEEecCCeEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccC
Confidence            88887     9999999999999999999999999999999999876 67999999999999999999999999999999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCccCCCCCC--cccccCCcccccccccc------cCCCCchhhhHHHHHHHHHHHhC
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSSVEGYTDP--VVGLFGSIDYVSPEALL------QDRITSKSDMWSLGVILYILLSG  240 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~------~~~~~~~~DiwslG~il~~ll~g  240 (521)
                      ||+|||+   +.++.+||+|||++........  .....||+.|+|||++.      ...++.++|||||||++|+|++|
T Consensus       129 kp~NIll---~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g  205 (330)
T cd05601         129 KPENVLI---DRTGHIKLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYG  205 (330)
T ss_pred             chHheEE---CCCCCEEeccCCCCeECCCCCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccC
Confidence            9999999   7788999999999976543322  12346899999999986      45678899999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccC
Q 009980          241 YPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIG  304 (521)
Q Consensus       241 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~  304 (521)
                      ..||...+.......+.........+....+++.+++||.+||. +|.+|||+.++++||||..
T Consensus       206 ~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~  268 (330)
T cd05601         206 RSPFHEGTSAKTYNNIMNFQRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSK  268 (330)
T ss_pred             CCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCC
Confidence            99999888877777776654322222234589999999999998 9999999999999999975

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=2.8e-46  Score=368.53  Aligned_cols=255  Identities=31%  Similarity=0.518  Sum_probs=219.4

Q ss_pred             cccccccCceEEEEeEEcc-CCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHH
Q 009980           15 TDILGRGGFSVVRRGIKKT-CGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRK   93 (521)
Q Consensus        15 ~~~lG~G~~g~V~~a~~~~-~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~   93 (521)
                      ++.||+|+||.||+|++.. ..+++.||||++.+......                        ......+.+|+.++++
T Consensus         1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~------------------------~~~~~~~~~E~~il~~   56 (323)
T cd05584           1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRN------------------------QKDTAHTKAERNILEA   56 (323)
T ss_pred             CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhh------------------------hhhHHHHHHHHHHHHh
Confidence            3689999999999998753 22678999999975322110                        0122346789999999


Q ss_pred             HhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q 009980           94 IVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENC  173 (521)
Q Consensus        94 l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Ni  173 (521)
                      +     +||||+++++++..++.+|+||||+.|++|.+++...+.+++..+..++.||+.||.|||++||+||||||+||
T Consensus        57 l-----~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Ni  131 (323)
T cd05584          57 V-----KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENI  131 (323)
T ss_pred             C-----CCCchhceeeEEecCCeEEEEEeCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHe
Confidence            8     99999999999999999999999999999999999888999999999999999999999999999999999999


Q ss_pred             EEeeCCCCCCEEEeecCCCccCCCC-CCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCcHHH
Q 009980          174 LFLNDREDSPLKIMDFGLSSVEGYT-DPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQK  252 (521)
Q Consensus       174 l~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~  252 (521)
                      |+   +.++.+||+|||+++..... ......+||+.|+|||++.+..++.++|||||||++|+|++|++||.+.+....
T Consensus       132 l~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~  208 (323)
T cd05584         132 LL---DAQGHVKLTDFGLCKESIHEGTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKT  208 (323)
T ss_pred             EE---CCCCCEEEeeCcCCeecccCCCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHH
Confidence            99   77889999999998743222 223345799999999999988899999999999999999999999999888888


Q ss_pred             HHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCC-----CHHHHHcCCcccCC
Q 009980          253 QQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRP-----SAQELLNHPWVIGD  305 (521)
Q Consensus       253 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~-----t~~~~l~h~~~~~~  305 (521)
                      ...+..+....+    ..+++.+.+||.+||..+|++||     ++.++++||||...
T Consensus       209 ~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~  262 (323)
T cd05584         209 IDKILKGKLNLP----PYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHV  262 (323)
T ss_pred             HHHHHcCCCCCC----CCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCC
Confidence            888887766554    45799999999999999999999     89999999999753

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=100.00  E-value=5.5e-46  Score=361.24  Aligned_cols=260  Identities=27%  Similarity=0.398  Sum_probs=210.5

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ++|++.+.||+|+||.||+|++... .++.||+|.+.......                          .......+|+.
T Consensus         1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~-~~~~vavK~~~~~~~~~--------------------------~~~~~~~~e~~   53 (290)
T cd07862           1 QQYECVAEIGEGAYGKVFKARDLKN-GGRFVALKRVRVQTGEE--------------------------GMPLSTIREVA   53 (290)
T ss_pred             CCcceeeEeccCCCeEEEEEEEcCC-CCeEEEEEEEecccCCC--------------------------CchHHHHHHHH
Confidence            4799999999999999999998642 46789999986532211                          11123556777


Q ss_pred             HHHHHhhccCCCCCccceeEEEE-----eCCeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYE-----DQNGVHLILELCSGGELFDRIVAQ--ERYMEVGAAAVIRQIAEGLAALHQAN  162 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~-----~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~al~~lH~~~  162 (521)
                      +++.+..  ..||||+++++++.     ....+++||||+. ++|.+++...  ..+++..+..++.||+.||.|||++|
T Consensus        54 ~l~~l~~--~~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~  130 (290)
T cd07862          54 VLRHLET--FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR  130 (290)
T ss_pred             HHHhhcc--cCCCCcceEEEEEecccCCCCCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            7766511  27999999999985     3456999999996 4898888653  45899999999999999999999999


Q ss_pred             CeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCC
Q 009980          163 IVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYP  242 (521)
Q Consensus       163 i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~  242 (521)
                      |+||||||+|||+   +.++.+||+|||+++............||+.|+|||.+.+..++.++||||+||++|+|++|.+
T Consensus       131 iiH~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~  207 (290)
T cd07862         131 VVHRDLKPQNILV---TSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKP  207 (290)
T ss_pred             eeeCCCCHHHEEE---cCCCCEEEccccceEeccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCC
Confidence            9999999999999   7778999999999986554444445678999999999988899999999999999999999999


Q ss_pred             CCCCCCcHHHHHHHHcCCCCCc-----------------------hhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          243 PFIAQSNRQKQQMIMAGEFSFY-----------------------EQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       243 pf~~~~~~~~~~~i~~~~~~~~-----------------------~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      ||.+.+..+....+........                       ....+.+++.+++|+.+||+.||++|||+.++|+|
T Consensus       208 ~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~h  287 (290)
T cd07862         208 LFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH  287 (290)
T ss_pred             CcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence            9998887776666654321111                       11123578889999999999999999999999999


Q ss_pred             Ccc
Q 009980          300 PWV  302 (521)
Q Consensus       300 ~~~  302 (521)
                      |||
T Consensus       288 p~f  290 (290)
T cd07862         288 PYF  290 (290)
T ss_pred             CCC
Confidence            997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=100.00  E-value=3.7e-46  Score=366.77  Aligned_cols=252  Identities=28%  Similarity=0.444  Sum_probs=217.1

Q ss_pred             ccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHHh
Q 009980           16 DILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIV   95 (521)
Q Consensus        16 ~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~   95 (521)
                      +.||+|+||+||+|.++.  +++.||||++.+.....                         ......+..|+.++..+ 
T Consensus         1 ~~lG~G~~g~V~~~~~~~--~~~~~aiK~~~~~~~~~-------------------------~~~~~~~~~e~~il~~~-   52 (318)
T cd05570           1 KVLGKGSFGKVLLAELKG--TDELYAVKVLKKDVILQ-------------------------DDDVECTMTEKRVLALA-   52 (318)
T ss_pred             CeeeeCCCeEEEEEEECC--CCCEEEEEEEEHHHHhh-------------------------hhHHHHHHHHHHHHHhc-
Confidence            469999999999999987  78899999997642211                         01123456777777665 


Q ss_pred             hccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q 009980           96 ENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLF  175 (521)
Q Consensus        96 ~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~  175 (521)
                         .+||||+++++++.+.+.+|+||||+.||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+||++
T Consensus        53 ---~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill  129 (318)
T cd05570          53 ---GKHPFLTQLHSCFQTKDRLFFVMEYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLL  129 (318)
T ss_pred             ---cCCCCccceeeEEEcCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEE
Confidence               37999999999999999999999999999999999888899999999999999999999999999999999999999


Q ss_pred             eeCCCCCCEEEeecCCCccCCC-CCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCcHHHHH
Q 009980          176 LNDREDSPLKIMDFGLSSVEGY-TDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQ  254 (521)
Q Consensus       176 ~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~  254 (521)
                         +.++.+||+|||+++.... .......+||+.|+|||++.+..++.++||||+||++|+|++|+.||.+.+......
T Consensus       130 ---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~  206 (318)
T cd05570         130 ---DSEGHIKIADFGMCKEGILGGVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQ  206 (318)
T ss_pred             ---CCCCcEEecccCCCeecCcCCCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHH
Confidence               7788999999999875322 222334579999999999999999999999999999999999999999888888888


Q ss_pred             HHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCH-----HHHHcCCcccCC
Q 009980          255 MIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSA-----QELLNHPWVIGD  305 (521)
Q Consensus       255 ~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~-----~~~l~h~~~~~~  305 (521)
                      .+......++    ..++..+.+||.+||..||.+|||+     .+++.||||...
T Consensus       207 ~i~~~~~~~~----~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~  258 (318)
T cd05570         207 SILEDEVRYP----RWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREI  258 (318)
T ss_pred             HHHcCCCCCC----CcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence            7777665544    4579999999999999999999999     999999999763

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=100.00  E-value=4.4e-46  Score=365.81  Aligned_cols=252  Identities=29%  Similarity=0.446  Sum_probs=212.2

Q ss_pred             ccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHHh
Q 009980           16 DILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIV   95 (521)
Q Consensus        16 ~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~   95 (521)
                      +.||+|+||.||+|+++.  +++.||||++++......                         ........|..++..+ 
T Consensus         1 ~~lG~G~~g~Vy~~~~~~--~~~~vaiK~~~~~~~~~~-------------------------~~~~~~~~e~~~l~~~-   52 (316)
T cd05592           1 KVLGKGSFGKVMLAELKG--TNEFFAIKALKKDVVLED-------------------------DDVECTMVERRVLALA-   52 (316)
T ss_pred             CeeeeCCCeEEEEEEECC--CCCEEEEEEEEHHHhhhh-------------------------hhHHHHHHHHHHHHhc-
Confidence            469999999999999987  788999999975322110                         1112234455555433 


Q ss_pred             hccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q 009980           96 ENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLF  175 (521)
Q Consensus        96 ~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~  175 (521)
                         .+||||+++++++...+.+|+||||+.||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+||++
T Consensus        53 ---~~hp~i~~~~~~~~~~~~~~lv~e~~~gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill  129 (316)
T cd05592          53 ---WEHPFLTHLFCTFQTKEHLFFVMEYLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLL  129 (316)
T ss_pred             ---cCCCCccceeeEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEE
Confidence               38999999999999999999999999999999999888899999999999999999999999999999999999999


Q ss_pred             eeCCCCCCEEEeecCCCccCCCC-CCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCcHHHHH
Q 009980          176 LNDREDSPLKIMDFGLSSVEGYT-DPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQ  254 (521)
Q Consensus       176 ~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~  254 (521)
                         +.++.+||+|||+|+..... ......+||+.|+|||++.+..++.++||||+||++|+|++|..||.+.+..+...
T Consensus       130 ---~~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~  206 (316)
T cd05592         130 ---DKDGHIKIADFGMCKENMNGEGKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFD  206 (316)
T ss_pred             ---CCCCCEEEccCcCCeECCCCCCccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence               77889999999999754322 22344579999999999998899999999999999999999999999988888877


Q ss_pred             HHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCH-HHHHcCCcccCC
Q 009980          255 MIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSA-QELLNHPWVIGD  305 (521)
Q Consensus       255 ~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~-~~~l~h~~~~~~  305 (521)
                      .+......++    ..++.++.+||.+||..||.+||++ .++++||||...
T Consensus       207 ~i~~~~~~~~----~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~~  254 (316)
T cd05592         207 SILNDRPHFP----RWISKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRGI  254 (316)
T ss_pred             HHHcCCCCCC----CCCCHHHHHHHHHHccCCHHHcCCChHHHHcCcccCCC
Confidence            7766554433    4578999999999999999999986 588899999753

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=100.00  E-value=3.9e-46  Score=373.59  Aligned_cols=264  Identities=29%  Similarity=0.429  Sum_probs=221.1

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      +.-.++|++.+.||+|+||.||+|+++.  +++.||+|++.+.....                         ......+.
T Consensus        39 ~~~~~~y~i~~~lG~G~fg~Vy~~~~~~--~~~~~aiK~i~~~~~~~-------------------------~~~~~~~~   91 (371)
T cd05622          39 RMKAEDYEVVKVIGRGAFGEVQLVRHKS--TRKVYAMKLLSKFEMIK-------------------------RSDSAFFW   91 (371)
T ss_pred             CcchhhcEEEEEEeecCCeEEEEEEECC--CCcEEEEEEEEHHHhhh-------------------------hHHHHHHH
Confidence            4446899999999999999999999998  78899999986532111                         01233467


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      +|+.+++.+     +||||+++++++.+++.+|+|||||+||+|.+++.. ..+++..+..++.||+.||.|||++||+|
T Consensus        92 ~e~~i~~~~-----~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivH  165 (371)
T cd05622          92 EERDIMAFA-----NSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN-YDVPEKWARFYTAEVVLALDAIHSMGFIH  165 (371)
T ss_pred             HHHHHHHhC-----CCCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCEEe
Confidence            888888887     999999999999999999999999999999998865 46899999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC--CcccccCCcccccccccccCC----CCchhhhHHHHHHHHHHHh
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD--PVVGLFGSIDYVSPEALLQDR----ITSKSDMWSLGVILYILLS  239 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~----~~~~~DiwslG~il~~ll~  239 (521)
                      |||||+|||+   +.++.+||+|||+|.......  .....+||+.|+|||++.+..    ++.++|||||||++|+|++
T Consensus       166 rDLkp~NIll---~~~~~ikL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~  242 (371)
T cd05622         166 RDVKPDNMLL---DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLV  242 (371)
T ss_pred             CCCCHHHEEE---CCCCCEEEEeCCceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHh
Confidence            9999999999   778899999999997654322  223457999999999987543    7889999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCC--CCCHHHHHcCCcccCC
Q 009980          240 GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNR--RPSAQELLNHPWVIGD  305 (521)
Q Consensus       240 g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~--R~t~~~~l~h~~~~~~  305 (521)
                      |.+||.+.+.......+.........+....+|..++++|.+||..++.+  |++++++++||||.+.
T Consensus       243 G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~~  310 (371)
T cd05622         243 GDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND  310 (371)
T ss_pred             CCCCCCCCCHHHHHHHHHcCCCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcccCCC
Confidence            99999998888888888765543333334578999999999999844433  7899999999999764

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=100.00  E-value=2.1e-46  Score=371.15  Aligned_cols=265  Identities=26%  Similarity=0.374  Sum_probs=218.3

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      +.+..+|+|.+.||+|+||.|.+|.+..  +++.||||++++...                             ......
T Consensus       182 d~i~~rY~V~e~LGkGtFGQVvk~~d~~--T~e~VAIKIiKN~k~-----------------------------f~~Q~~  230 (586)
T KOG0667|consen  182 DHIAYRYEVLEVLGKGSFGQVVKAYDHK--TGEIVAIKIIKNKKR-----------------------------FLRQAQ  230 (586)
T ss_pred             ceeEEEEEEEEEecccccceeEEEEecC--CCcEEEEEeeccChH-----------------------------HHHHHH
Confidence            4556699999999999999999999998  899999999976432                             123456


Q ss_pred             HHHHHHHHHhh-ccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC
Q 009980           86 NEILVMRKIVE-NVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE--RYMEVGAAAVIRQIAEGLAALHQAN  162 (521)
Q Consensus        86 ~E~~~l~~l~~-~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~al~~lH~~~  162 (521)
                      .|+.+|..|.. ...+--|+|+++++|...++.|||+|++. -+|+++++.+.  .++...++.++.||+.||.+||+.|
T Consensus       231 ~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~HlciVfELL~-~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~  309 (586)
T KOG0667|consen  231 IEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCIVFELLS-TNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELG  309 (586)
T ss_pred             HHHHHHHHHhccCCCCCeeEEEeeeccccccceeeeehhhh-hhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            79999998842 12234589999999999999999999995 59999998764  5889999999999999999999999


Q ss_pred             CeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCC
Q 009980          163 IVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYP  242 (521)
Q Consensus       163 i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~  242 (521)
                      |||+||||||||+.+.. ...|||+|||.|+....  ...+.+.+..|+|||++.+.+|+.+.||||||||++||++|.|
T Consensus       310 IIHcDLKPENILL~~~~-r~~vKVIDFGSSc~~~q--~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~P  386 (586)
T KOG0667|consen  310 IIHCDLKPENILLKDPK-RSRIKVIDFGSSCFESQ--RVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEP  386 (586)
T ss_pred             eeeccCChhheeeccCC-cCceeEEecccccccCC--cceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCcc
Confidence            99999999999997644 44899999999987653  3346788999999999999999999999999999999999999


Q ss_pred             CCCCCCcHHHHHHHHcCCCCCch--------------h----------------------------------------hh
Q 009980          243 PFIAQSNRQKQQMIMAGEFSFYE--------------Q----------------------------------------TW  268 (521)
Q Consensus       243 pf~~~~~~~~~~~i~~~~~~~~~--------------~----------------------------------------~~  268 (521)
                      .|.+.++.+.+..|..-...++.              .                                        .+
T Consensus       387 LfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l  466 (586)
T KOG0667|consen  387 LFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSL  466 (586)
T ss_pred             ccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCccc
Confidence            99999987776665431110000              0                                        00


Q ss_pred             ----h-ccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCC
Q 009980          269 ----K-NISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGD  305 (521)
Q Consensus       269 ----~-~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~  305 (521)
                          . .-...+.+||.+||.+||.+|+|+.++|+|||+.+.
T Consensus       467 ~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hpfl~~~  508 (586)
T KOG0667|consen  467 ESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHPFLTGT  508 (586)
T ss_pred             chhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCcccccc
Confidence                0 012346899999999999999999999999999853

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=100.00  E-value=3.1e-46  Score=368.30  Aligned_cols=251  Identities=28%  Similarity=0.473  Sum_probs=213.5

Q ss_pred             ccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH-HHHHH
Q 009980           16 DILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL-VMRKI   94 (521)
Q Consensus        16 ~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~-~l~~l   94 (521)
                      +.||+|+||+||+|+++.  +++.||||++.+.....                         ......+..|.. +++.+
T Consensus         1 ~~lg~G~~g~V~~~~~~~--~~~~vaiK~~~~~~~~~-------------------------~~~~~~~~~e~~~~~~~l   53 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKA--DGKFYAVKVLQKKAILK-------------------------KKEQKHIMAERNVLLKNV   53 (323)
T ss_pred             CeeeeCCCeEEEEEEECC--CCCEEEEEEEEHHHHhh-------------------------hhHHHHHHHHHHHHHhhC
Confidence            469999999999999988  78899999997532211                         011122344444 34555


Q ss_pred             hhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q 009980           95 VENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCL  174 (521)
Q Consensus        95 ~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil  174 (521)
                           +||||+++++++.+.+.+|+||||+.||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||
T Consensus        54 -----~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIl  128 (323)
T cd05575          54 -----KHPFLVGLHYSFQTADKLYFVLDYVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENIL  128 (323)
T ss_pred             -----CCCCCCCeeEEEEeCCEEEEEEcCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeE
Confidence                 999999999999999999999999999999999998889999999999999999999999999999999999999


Q ss_pred             EeeCCCCCCEEEeecCCCccCCC-CCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCcHHHH
Q 009980          175 FLNDREDSPLKIMDFGLSSVEGY-TDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQ  253 (521)
Q Consensus       175 ~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~  253 (521)
                      +   +.++.+||+|||++..... .......+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+..+..
T Consensus       129 l---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~  205 (323)
T cd05575         129 L---DSQGHVVLTDFGLCKEGIEHSKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMY  205 (323)
T ss_pred             E---CCCCcEEEeccCCCcccccCCCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHH
Confidence            9   7788999999999875322 22334457999999999999989999999999999999999999999998888888


Q ss_pred             HHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCH----HHHHcCCcccCC
Q 009980          254 QMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSA----QELLNHPWVIGD  305 (521)
Q Consensus       254 ~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~----~~~l~h~~~~~~  305 (521)
                      ..+..+....+    ..+++.+.++|.+||+.||.+||++    .++++||||...
T Consensus       206 ~~i~~~~~~~~----~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~  257 (323)
T cd05575         206 DNILNKPLRLK----PNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSI  257 (323)
T ss_pred             HHHHcCCCCCC----CCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCC
Confidence            88877665443    4579999999999999999999997    699999999753

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=100.00  E-value=2.4e-46  Score=370.78  Aligned_cols=260  Identities=27%  Similarity=0.450  Sum_probs=213.5

Q ss_pred             ceeecccccccCceEEEEeEEcc-CCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           11 EYEVTDILGRGGFSVVRRGIKKT-CGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        11 ~Y~~~~~lG~G~~g~V~~a~~~~-~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      +|++.+.||+|+||.||+|++.. ..+++.||+|++.+.....                        .......+..|+.
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~------------------------~~~~~~~~~~e~~   56 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQ------------------------KAKTVEHTRTERN   56 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhh------------------------hhhHHHHHHHHHH
Confidence            58999999999999999998753 1267899999997532211                        0012234667888


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCC
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLK  169 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlk  169 (521)
                      +++++    .+||||+++++++..++.+|+||||+.||+|.+++.....+++..+..++.||+.||.|||++||+|||||
T Consensus        57 ~l~~l----~~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlk  132 (332)
T cd05614          57 VLEHV----RQSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIK  132 (332)
T ss_pred             HHHhc----cCCCCcccEEEEEecCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCC
Confidence            88877    36999999999999999999999999999999999888889999999999999999999999999999999


Q ss_pred             CCcEEEeeCCCCCCEEEeecCCCccCCCCC--CcccccCCcccccccccccC-CCCchhhhHHHHHHHHHHHhCCCCCCC
Q 009980          170 PENCLFLNDREDSPLKIMDFGLSSVEGYTD--PVVGLFGSIDYVSPEALLQD-RITSKSDMWSLGVILYILLSGYPPFIA  246 (521)
Q Consensus       170 p~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~  246 (521)
                      |+|||+   +.++.+||+|||+++......  .....+||+.|+|||++.+. .++.++|||||||++|+|++|..||..
T Consensus       133 p~Nili---~~~~~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~  209 (332)
T cd05614         133 LENILL---DSEGHVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTL  209 (332)
T ss_pred             HHHeEE---CCCCCEEEeeCcCCccccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCC
Confidence            999999   777899999999997543222  22345799999999999765 478899999999999999999999965


Q ss_pred             CCc----HHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCC-----CHHHHHcCCcccCC
Q 009980          247 QSN----RQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRP-----SAQELLNHPWVIGD  305 (521)
Q Consensus       247 ~~~----~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~-----t~~~~l~h~~~~~~  305 (521)
                      ...    ......+......+    +..+++.++++|.+||..||++||     +++++++||||...
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~  273 (332)
T cd05614         210 EGERNTQSEVSRRILKCDPPF----PSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGL  273 (332)
T ss_pred             CCCCCCHHHHHHHHhcCCCCC----CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence            332    23334444443333    245899999999999999999999     88999999999753

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.8e-47  Score=345.85  Aligned_cols=260  Identities=29%  Similarity=0.475  Sum_probs=234.8

Q ss_pred             ccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEI   88 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   88 (521)
                      -++|.++++||+|.||+|-+|+.+.  +++.||||++++.-....                         .+.+.-..|-
T Consensus       167 m~dFdfLKvLGkGTFGKVIL~rEKa--t~k~YAiKIlkKeviiak-------------------------dEVAHTlTE~  219 (516)
T KOG0690|consen  167 MEDFDFLKVLGKGTFGKVILCREKA--TGKLYAIKILKKEVIIAK-------------------------DEVAHTLTEN  219 (516)
T ss_pred             cchhhHHHHhcCCccceEEEEeecc--cCceeehhhhhhhheeeh-------------------------HHhhhhhhHH
Confidence            4688999999999999999999998  899999999987544321                         1123345677


Q ss_pred             HHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 009980           89 LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDL  168 (521)
Q Consensus        89 ~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dl  168 (521)
                      ++|+..     +||.+..+...|+..+++|+||||+.||.|+-++.+...++|..++.+...|++||.|||+++||.|||
T Consensus       220 RVL~~~-----~HPFLt~LKYsFQt~drlCFVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDl  294 (516)
T KOG0690|consen  220 RVLQNC-----RHPFLTSLKYSFQTQDRLCFVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDL  294 (516)
T ss_pred             HHHHhc-----cCcHHHHhhhhhccCceEEEEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeec
Confidence            888877     999999999999999999999999999999999999899999999999999999999999999999999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCcc-CCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSSV-EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQ  247 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~~-~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~  247 (521)
                      |.+|.|+   +.+|.+||+|||+++. ........+.||||.|+|||++....|+.++|.|.+||++|+|++|+.||...
T Consensus       295 KLENLlL---DkDGHIKitDFGLCKE~I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~  371 (516)
T KOG0690|consen  295 KLENLLL---DKDGHIKITDFGLCKEEIKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNK  371 (516)
T ss_pred             hhhhhee---ccCCceEeeecccchhcccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCccccc
Confidence            9999999   9999999999999985 34556677889999999999999999999999999999999999999999999


Q ss_pred             CcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCC-----HHHHHcCCcccCCCC
Q 009980          248 SNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPS-----AQELLNHPWVIGDSA  307 (521)
Q Consensus       248 ~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t-----~~~~l~h~~~~~~~~  307 (521)
                      +....+..|......+|    ..+|++++.|+..+|.+||.+|..     +.++..|+||..-.+
T Consensus       372 dh~kLFeLIl~ed~kFP----r~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~W  432 (516)
T KOG0690|consen  372 DHEKLFELILMEDLKFP----RTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVDW  432 (516)
T ss_pred             chhHHHHHHHhhhccCC----ccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCCH
Confidence            99999999999998887    568999999999999999999954     899999999986543

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.9e-46  Score=359.85  Aligned_cols=260  Identities=28%  Similarity=0.448  Sum_probs=216.6

Q ss_pred             ceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHH
Q 009980           11 EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILV   90 (521)
Q Consensus        11 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   90 (521)
                      .|++.+.||+|+||.||+|.+..  +++.||||++.+.....                         ......+.+|+.+
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~--~~~~vavK~~~~~~~~~-------------------------~~~~~~~~~E~~~   53 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRA--TGKMYACKKLEKKRIKK-------------------------RKGEAMALNEKQI   53 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcC--CCceEEEEEEehhhhhh-------------------------hhhHHHHHHHHHH
Confidence            48999999999999999999987  78899999986532211                         0113346789999


Q ss_pred             HHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 009980           91 MRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ--ERYMEVGAAAVIRQIAEGLAALHQANIVHRDL  168 (521)
Q Consensus        91 l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~al~~lH~~~i~H~dl  168 (521)
                      ++++     +||||+++++++.+++..|+||||+.||+|.+++...  ..+++..+..++.|++.||.|||++|++||||
T Consensus        54 l~~l-----~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dl  128 (285)
T cd05605          54 LEKV-----NSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDL  128 (285)
T ss_pred             HHhc-----CCCCEeeeeeeecCCCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCC
Confidence            9998     9999999999999999999999999999999887653  46899999999999999999999999999999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCC
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQS  248 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~  248 (521)
                      ||+||++   +.++.++|+|||++............+|++.|+|||++.+..++.++||||+||++|+|++|..||.+.+
T Consensus       129 kp~Nil~---~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~  205 (285)
T cd05605         129 KPENILL---DDYGHIRISDLGLAVEIPEGETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRK  205 (285)
T ss_pred             CHHHEEE---CCCCCEEEeeCCCceecCCCCccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCc
Confidence            9999999   7778899999999986544333345579999999999998889999999999999999999999998766


Q ss_pred             cHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCC-----CHHHHHcCCcccCC
Q 009980          249 NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRP-----SAQELLNHPWVIGD  305 (521)
Q Consensus       249 ~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~-----t~~~~l~h~~~~~~  305 (521)
                      .......+...........+..++..+.+|+.+||..||.+||     +++++++||||...
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~  267 (285)
T cd05605         206 EKVKREEVERRVKEDQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTA  267 (285)
T ss_pred             hhhHHHHHHHHhhhcccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCC
Confidence            5433333322211112222355899999999999999999999     99999999999753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=100.00  E-value=8.8e-46  Score=363.51  Aligned_cols=252  Identities=27%  Similarity=0.433  Sum_probs=213.4

Q ss_pred             ccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHHh
Q 009980           16 DILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIV   95 (521)
Q Consensus        16 ~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~   95 (521)
                      +.||+|+||.||+|+++.  +++.||||++++.....                         .........|..++..+ 
T Consensus         1 ~~lG~G~~g~Vy~~~~~~--~~~~vaiK~~~~~~~~~-------------------------~~~~~~~~~e~~~l~~~-   52 (316)
T cd05619           1 KMLGKGSFGKVFLAELKG--TNQFFAIKALKKDVVLM-------------------------DDDVECTMVEKRVLSLA-   52 (316)
T ss_pred             CeeeeCCCEEEEEEEECC--CCCEEEEEEEEHHHhhh-------------------------cchHHHHHHHHHHHHhc-
Confidence            469999999999999987  78899999997532110                         01122345566666543 


Q ss_pred             hccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q 009980           96 ENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLF  175 (521)
Q Consensus        96 ~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~  175 (521)
                         .+||||+++++++.+.+.+|+||||++||+|.+++.....+++..+..++.|++.||.|||++||+||||||+||++
T Consensus        53 ---~~hp~iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~  129 (316)
T cd05619          53 ---WEHPFLTHLYCTFQTKENLFFVMEYLNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILL  129 (316)
T ss_pred             ---cCCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEE
Confidence               38999999999999999999999999999999999888889999999999999999999999999999999999999


Q ss_pred             eeCCCCCCEEEeecCCCccCCC-CCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCcHHHHH
Q 009980          176 LNDREDSPLKIMDFGLSSVEGY-TDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQ  254 (521)
Q Consensus       176 ~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~  254 (521)
                         +.++.+||+|||++..... ........||+.|+|||++.+..++.++||||+||++|+|++|..||.+.+..+...
T Consensus       130 ---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~  206 (316)
T cd05619         130 ---DTDGHIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQ  206 (316)
T ss_pred             ---CCCCCEEEccCCcceECCCCCCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence               7788899999999875322 222344579999999999998899999999999999999999999999888877777


Q ss_pred             HHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHH-HHHcCCcccCC
Q 009980          255 MIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQ-ELLNHPWVIGD  305 (521)
Q Consensus       255 ~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~-~~l~h~~~~~~  305 (521)
                      .+......++    ..++.+++++|.+||..||.+||++. ++++||||...
T Consensus       207 ~i~~~~~~~~----~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~~~~  254 (316)
T cd05619         207 SIRMDNPCYP----RWLTREAKDILVKLFVREPERRLGVKGDIRQHPFFREI  254 (316)
T ss_pred             HHHhCCCCCC----ccCCHHHHHHHHHHhccCHhhcCCChHHHHcCcccCCC
Confidence            7766554433    34789999999999999999999996 89999999764

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=100.00  E-value=8.6e-46  Score=365.69  Aligned_cols=252  Identities=23%  Similarity=0.409  Sum_probs=210.1

Q ss_pred             ccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHHh
Q 009980           16 DILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIV   95 (521)
Q Consensus        16 ~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~   95 (521)
                      +.||+|+||.||+|+++.  +++.||+|++.+.....                         ......+..|+.++.++ 
T Consensus         1 ~~lG~G~~g~V~~~~~~~--~~~~~aiK~~~~~~~~~-------------------------~~~~~~~~~E~~~l~~~-   52 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKK--TERIYAMKVVKKELVND-------------------------DEDIDWVQTEKHVFEQA-   52 (329)
T ss_pred             CeeeeCCCeEEEEEEECC--CCCEEEEEEEEhhHhcc-------------------------hhHHHHHHHHHHHHHhc-
Confidence            479999999999999987  78899999997643211                         01223466777777665 


Q ss_pred             hccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q 009980           96 ENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLF  175 (521)
Q Consensus        96 ~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~  175 (521)
                         .+||||+++++++...+.+|+||||++||+|..++...+.+++..+..++.||+.||.|||++||+||||||+||++
T Consensus        53 ---~~hp~iv~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili  129 (329)
T cd05618          53 ---SNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL  129 (329)
T ss_pred             ---CCCCcCCceeeEEEeCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEE
Confidence               48999999999999999999999999999999999888899999999999999999999999999999999999999


Q ss_pred             eeCCCCCCEEEeecCCCccCC-CCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCC-------
Q 009980          176 LNDREDSPLKIMDFGLSSVEG-YTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQ-------  247 (521)
Q Consensus       176 ~~~~~~~~~kl~Dfg~a~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~-------  247 (521)
                         +.++.+||+|||+++... ........+||+.|+|||++.+..++.++||||+||++|+|++|..||...       
T Consensus       130 ---~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~  206 (329)
T cd05618         130 ---DSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPD  206 (329)
T ss_pred             ---CCCCCEEEeeCCccccccCCCCccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcc
Confidence               778899999999987532 222234457999999999999999999999999999999999999999531       


Q ss_pred             --CcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCC------HHHHHcCCcccCC
Q 009980          248 --SNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPS------AQELLNHPWVIGD  305 (521)
Q Consensus       248 --~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t------~~~~l~h~~~~~~  305 (521)
                        ........+......++    ..++..++++|.+||..||.+|||      +.++++||||...
T Consensus       207 ~~~~~~~~~~i~~~~~~~p----~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~  268 (329)
T cd05618         207 QNTEDYLFQVILEKQIRIP----RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV  268 (329)
T ss_pred             cccHHHHHHHHhcCCCCCC----CCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCC
Confidence              11223344555544443    457999999999999999999998      5899999999753

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=100.00  E-value=1.1e-45  Score=364.24  Aligned_cols=257  Identities=25%  Similarity=0.413  Sum_probs=220.1

Q ss_pred             ceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHH
Q 009980           11 EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILV   90 (521)
Q Consensus        11 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   90 (521)
                      +|++.+.||+|+||.||+|+++.  +++.||||++.+.....                         ......+..|..+
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~--~~~~vaiK~~~~~~~~~-------------------------~~~~~~~~~e~~~   53 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKG--TDELYAIKILKKDVVIQ-------------------------DDDVECTMVEKRV   53 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECC--CCCEEEEEEEEHHHhhh-------------------------hhHHHHHHHHHHH
Confidence            47889999999999999999987  78899999997532211                         0112335567777


Q ss_pred             HHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCC
Q 009980           91 MRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKP  170 (521)
Q Consensus        91 l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp  170 (521)
                      +..+    .+||+|+++++++.+.+.+|+||||++||+|.+++...+.+++.++..++.||+.||.|||++||+||||||
T Consensus        54 l~~~----~~~~~i~~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp  129 (323)
T cd05615          54 LALQ----DKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKL  129 (323)
T ss_pred             HHhc----cCCCchhheeeEEecCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCH
Confidence            7665    367889999999999999999999999999999998888999999999999999999999999999999999


Q ss_pred             CcEEEeeCCCCCCEEEeecCCCccCCCC-CCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCc
Q 009980          171 ENCLFLNDREDSPLKIMDFGLSSVEGYT-DPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSN  249 (521)
Q Consensus       171 ~Nil~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~  249 (521)
                      +|||+   +.++.+||+|||+++..... ......+||+.|+|||++.+..++.++||||+||++|+|++|.+||.+.+.
T Consensus       130 ~Nill---~~~~~ikL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~  206 (323)
T cd05615         130 DNVML---DSEGHIKIADFGMCKEHMVDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE  206 (323)
T ss_pred             HHeEE---CCCCCEEEeccccccccCCCCccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCH
Confidence            99999   77889999999998753322 223345699999999999988999999999999999999999999999888


Q ss_pred             HHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCC-----HHHHHcCCcccCC
Q 009980          250 RQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPS-----AQELLNHPWVIGD  305 (521)
Q Consensus       250 ~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t-----~~~~l~h~~~~~~  305 (521)
                      ......+......++    ..+++++.+++.+||..+|.+|++     ..++++||||...
T Consensus       207 ~~~~~~i~~~~~~~p----~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~  263 (323)
T cd05615         207 DELFQSIMEHNVSYP----KSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRI  263 (323)
T ss_pred             HHHHHHHHhCCCCCC----ccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCC
Confidence            888888887766554    457999999999999999999997     5899999999753

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=9.6e-47  Score=369.69  Aligned_cols=260  Identities=31%  Similarity=0.537  Sum_probs=239.7

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      .+-...|.+.+.||+|.|++|.+|++..  ++..||||++.++....                          .....+.
T Consensus        52 ~~~vg~y~i~~tig~g~f~~V~La~~~~--t~~~VaiK~idkt~ln~--------------------------~~~~k~~  103 (596)
T KOG0586|consen   52 SNSVGLYVIIKTIGKGNFAKVKLARHIL--TGTEVAIKIIDKTQLNP--------------------------SKRQKLG  103 (596)
T ss_pred             cccccceeeeeeeccceeEEEEeeEecC--CCceEEEEEehhcccCh--------------------------HHHHHHH
Confidence            3456789999999999999999999998  78899999998876543                          1234478


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      +|+++|+.|     +|||||+++.+.+.+..+|+||||+.||.+++++.+.++..+.+++.++.|+++|++|||+++|+|
T Consensus       104 rev~imk~l-----~HPnIvkl~~v~~t~~~lylV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivH  178 (596)
T KOG0586|consen  104 REVDIMKSL-----NHPNIVKLFSVIETEATLYLVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVH  178 (596)
T ss_pred             HHHHHHHhc-----CCcceeeeeeeeeecceeEEEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceec
Confidence            999999999     999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCC-CchhhhHHHHHHHHHHHhCCCCC
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRI-TSKSDMWSLGVILYILLSGYPPF  244 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~~ll~g~~pf  244 (521)
                      ||||++|||+   +.+.++||+|||++..........+.||+|.|.|||++.+..| ++.+|+||+|+++|.|+.|.+||
T Consensus       179 rdLk~eNilL---~~~mnikIaDfgfS~~~~~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPF  255 (596)
T KOG0586|consen  179 RDLKAENILL---DENMNIKIADFGFSTFFDYGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPF  255 (596)
T ss_pred             cccchhhccc---ccccceeeeccccceeecccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeeccccc
Confidence            9999999999   7888899999999999888888889999999999999998887 58999999999999999999999


Q ss_pred             CCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCC
Q 009980          245 IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGD  305 (521)
Q Consensus       245 ~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~  305 (521)
                      .+.+..+.......+.+..+.    .+|.+++++|+++|.++|.+|++.+++..|.|+...
T Consensus       256 DG~~lk~Lr~rvl~gk~rIp~----~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~  312 (596)
T KOG0586|consen  256 DGQNLKELRPRVLRGKYRIPF----YMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDL  312 (596)
T ss_pred             CCcccccccchheeeeecccc----eeechhHHHHHHhhccCccccCCHHHhhhhcccchh
Confidence            999999999999998887763    478999999999999999999999999999999643

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=100.00  E-value=9.4e-46  Score=360.69  Aligned_cols=249  Identities=28%  Similarity=0.464  Sum_probs=213.2

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcce-EEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQ-VAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEI   88 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~-vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   88 (521)
                      ....+.+.||+|+||+||+|..+    |.. ||||++.......                          .....+.+|+
T Consensus        41 ~~l~~~~~iG~G~~g~V~~~~~~----g~~~vavK~~~~~~~~~--------------------------~~~~~f~~E~   90 (362)
T KOG0192|consen   41 DELPIEEVLGSGSFGTVYKGKWR----GTDVVAVKIISDPDFDD--------------------------ESRKAFRREA   90 (362)
T ss_pred             HHhhhhhhcccCCceeEEEEEeC----CceeEEEEEecchhcCh--------------------------HHHHHHHHHH
Confidence            44556677999999999999886    344 9999997543321                          1155799999


Q ss_pred             HHHHHHhhccCCCCCccceeEEEEeCC-eEEEEEeccCCCchHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-Ce
Q 009980           89 LVMRKIVENVSPHPNVIDLYDVYEDQN-GVHLILELCSGGELFDRIVA--QERYMEVGAAAVIRQIAEGLAALHQAN-IV  164 (521)
Q Consensus        89 ~~l~~l~~~~~~hpniv~~~~~~~~~~-~~~lv~e~~~gg~L~~~l~~--~~~~~~~~~~~i~~qil~al~~lH~~~-i~  164 (521)
                      .+|.++     +|||||++++++.++. ..+|||||+++|+|.+++..  ...++...+..++.+|+.|+.|||+++ |+
T Consensus        91 ~il~~l-----~HpNIV~f~G~~~~~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iI  165 (362)
T KOG0192|consen   91 SLLSRL-----RHPNIVQFYGACTSPPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPII  165 (362)
T ss_pred             HHHHhC-----CCCCeeeEEEEEcCCCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCee
Confidence            999999     9999999999999887 79999999999999999987  678999999999999999999999999 99


Q ss_pred             eccCCCCcEEEeeCCCCC-CEEEeecCCCccCCCC-CCcccccCCcccccccccc--cCCCCchhhhHHHHHHHHHHHhC
Q 009980          165 HRDLKPENCLFLNDREDS-PLKIMDFGLSSVEGYT-DPVVGLFGSIDYVSPEALL--QDRITSKSDMWSLGVILYILLSG  240 (521)
Q Consensus       165 H~dlkp~Nil~~~~~~~~-~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~--~~~~~~~~DiwslG~il~~ll~g  240 (521)
                      ||||||+|||+   +... .+||+|||+++..... .......||+.|||||++.  ...|+.++||||+|+++|||+||
T Consensus       166 HrDLK~~NiLv---~~~~~~~KI~DFGlsr~~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~  242 (362)
T KOG0192|consen  166 HRDLKSDNILV---DLKGKTLKIADFGLSREKVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTG  242 (362)
T ss_pred             ecccChhhEEE---cCCCCEEEECCCccceeeccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHC
Confidence            99999999999   7776 9999999999876544 3444468999999999999  56899999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          241 YPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       241 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      +.||.+....+....+..+...+..+  ..+++.+..++.+||..||..||++.+++.
T Consensus       243 ~~Pf~~~~~~~~~~~v~~~~~Rp~~p--~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~  298 (362)
T KOG0192|consen  243 EIPFEDLAPVQVASAVVVGGLRPPIP--KECPPHLSSLMERCWLVDPSRRPSFLEIVS  298 (362)
T ss_pred             CCCCCCCCHHHHHHHHHhcCCCCCCC--ccCCHHHHHHHHHhCCCCCCcCCCHHHHHH
Confidence            99999988866666665444433322  348999999999999999999999999885

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=100.00  E-value=1.2e-45  Score=369.50  Aligned_cols=262  Identities=27%  Similarity=0.408  Sum_probs=210.4

Q ss_pred             cccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHH
Q 009980            4 ETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDAL   83 (521)
Q Consensus         4 ~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (521)
                      ....+.++|++.+.||+|+||.||+|.++.  +++.||||++.+.....                          .....
T Consensus        15 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~--~~~~vavK~~~~~~~~~--------------------------~~~~~   66 (359)
T cd07876          15 STFTVLKRYQQLKPIGSGAQGIVCAAFDTV--LGINVAVKKLSRPFQNQ--------------------------THAKR   66 (359)
T ss_pred             hhhhhhhceEEEEEeecCCCEEEEEEEEcC--CCceeEEEEecccccch--------------------------hHHHH
Confidence            334577999999999999999999999987  78899999986432111                          12344


Q ss_pred             HHHHHHHHHHHhhccCCCCCccceeEEEEeCC------eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 009980           84 LTNEILVMRKIVENVSPHPNVIDLYDVYEDQN------GVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAA  157 (521)
Q Consensus        84 ~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~------~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~  157 (521)
                      +.+|+.+++.+     +||||+++++++...+      .+|+||||+.+ +|.+.+.  ..+++..+..++.||+.||.|
T Consensus        67 ~~~E~~~l~~l-----~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~--~~~~~~~~~~~~~qi~~~L~~  138 (359)
T cd07876          67 AYRELVLLKCV-----NHKNIISLLNVFTPQKSLEEFQDVYLVMELMDA-NLCQVIH--MELDHERMSYLLYQMLCGIKH  138 (359)
T ss_pred             HHHHHHHHHhC-----CCCCEeeeeeeeccCCCccccceeEEEEeCCCc-CHHHHHh--ccCCHHHHHHHHHHHHHHHHH
Confidence            67899999988     9999999999986543      57999999976 5666654  358899999999999999999


Q ss_pred             HHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHH
Q 009980          158 LHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYIL  237 (521)
Q Consensus       158 lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l  237 (521)
                      ||++||+||||||+||++   +.++.+||+|||+++............||+.|+|||++.+..++.++|||||||++|+|
T Consensus       139 LH~~~ivHrDlkp~NIl~---~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el  215 (359)
T cd07876         139 LHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEL  215 (359)
T ss_pred             HHhCCcccCCCCHHHEEE---CCCCCEEEecCCCccccccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHH
Confidence            999999999999999999   77889999999999765443334456789999999999998999999999999999999


Q ss_pred             HhCCCCCCCCCcHHHHHHHHcC----------------------CCCCch----------------hhhhccCHHHHHHH
Q 009980          238 LSGYPPFIAQSNRQKQQMIMAG----------------------EFSFYE----------------QTWKNISSSAKQLI  279 (521)
Q Consensus       238 l~g~~pf~~~~~~~~~~~i~~~----------------------~~~~~~----------------~~~~~~s~~~~~li  279 (521)
                      ++|++||.+.+.......+...                      ....+.                ......++.+++||
T Consensus       216 ~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  295 (359)
T cd07876         216 VKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLL  295 (359)
T ss_pred             HhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHH
Confidence            9999999876644332222111                      000000                01112467899999


Q ss_pred             HHhccCCCCCCCCHHHHHcCCcccC
Q 009980          280 SSLLTVDPNRRPSAQELLNHPWVIG  304 (521)
Q Consensus       280 ~~~l~~dp~~R~t~~~~l~h~~~~~  304 (521)
                      .+||..||++|||+.++|+|||+..
T Consensus       296 ~~mL~~dP~~R~t~~e~l~hp~~~~  320 (359)
T cd07876         296 SKMLVIDPDKRISVDEALRHPYITV  320 (359)
T ss_pred             HHHhccCcccCCCHHHHhcCchhhh
Confidence            9999999999999999999999964

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>PTZ00036 glycogen synthase kinase; Provisional

Probab=100.00  E-value=9.8e-46  Score=378.14  Aligned_cols=254  Identities=28%  Similarity=0.388  Sum_probs=206.9

Q ss_pred             cccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      ...+|++++.||+|+||.||+|++..  +++.||||.+....                                ....+|
T Consensus        64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~--~~~~vAiK~i~~~~--------------------------------~~~~~E  109 (440)
T PTZ00036         64 PNKSYKLGNIIGNGSFGVVYEAICID--TSEKVAIKKVLQDP--------------------------------QYKNRE  109 (440)
T ss_pred             cCCeEEEeEEEEeCCCEEEEEEEECC--CCCEEEEEEEecCc--------------------------------chHHHH
Confidence            34689999999999999999999987  78899999885321                                124579


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEeC--------CeEEEEEeccCCCchHHHHH----hcCCCCHHHHHHHHHHHHHHH
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYEDQ--------NGVHLILELCSGGELFDRIV----AQERYMEVGAAAVIRQIAEGL  155 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~~--------~~~~lv~e~~~gg~L~~~l~----~~~~~~~~~~~~i~~qil~al  155 (521)
                      +.+++.+     +||||++++++|...        ..+++||||+++ +|.+.+.    ....+++..++.++.||+.||
T Consensus       110 i~il~~l-----~h~niv~l~~~~~~~~~~~~~~~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL  183 (440)
T PTZ00036        110 LLIMKNL-----NHINIIFLKDYYYTECFKKNEKNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRAL  183 (440)
T ss_pred             HHHHHhc-----CCCCCcceeeeEeecccccCCCceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHH
Confidence            9999998     999999999987432        257799999976 6766654    346799999999999999999


Q ss_pred             HHHHHCCCeeccCCCCcEEEeeCCCC-CCEEEeecCCCccCCCCCCcccccCCcccccccccccC-CCCchhhhHHHHHH
Q 009980          156 AALHQANIVHRDLKPENCLFLNDRED-SPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQD-RITSKSDMWSLGVI  233 (521)
Q Consensus       156 ~~lH~~~i~H~dlkp~Nil~~~~~~~-~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~i  233 (521)
                      .|||++||+||||||+|||+   +.+ +.+||+|||+|+............||+.|+|||++.+. .|+.++||||+||+
T Consensus       184 ~yLH~~~IiHrDLKp~NILl---~~~~~~vkL~DFGla~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvi  260 (440)
T PTZ00036        184 AYIHSKFICHRDLKPQNLLI---DPNTHTLKLCDFGSAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCI  260 (440)
T ss_pred             HHHHHCCEecCCcCHHHEEE---cCCCCceeeeccccchhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHH
Confidence            99999999999999999999   433 46999999999876544444556789999999998654 68999999999999


Q ss_pred             HHHHHhCCCCCCCCCcHHHHHHHHcCCCC-----------------Cch--------hhhhccCHHHHHHHHHhccCCCC
Q 009980          234 LYILLSGYPPFIAQSNRQKQQMIMAGEFS-----------------FYE--------QTWKNISSSAKQLISSLLTVDPN  288 (521)
Q Consensus       234 l~~ll~g~~pf~~~~~~~~~~~i~~~~~~-----------------~~~--------~~~~~~s~~~~~li~~~l~~dp~  288 (521)
                      +|+|++|.+||.+.+..+....+......                 ++.        ......|+++++||.+||.+||.
T Consensus       261 l~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~  340 (440)
T PTZ00036        261 IAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPL  340 (440)
T ss_pred             HHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChh
Confidence            99999999999988766655544332111                 110        01124678999999999999999


Q ss_pred             CCCCHHHHHcCCcccC
Q 009980          289 RRPSAQELLNHPWVIG  304 (521)
Q Consensus       289 ~R~t~~~~l~h~~~~~  304 (521)
                      +|||+.++|+||||..
T Consensus       341 ~R~ta~e~l~hp~f~~  356 (440)
T PTZ00036        341 KRLNPIEALADPFFDD  356 (440)
T ss_pred             HCcCHHHHhCChhHHh
Confidence            9999999999999964

>PHA03212 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1.6e-45  Score=370.70  Aligned_cols=252  Identities=22%  Similarity=0.358  Sum_probs=207.7

Q ss_pred             ccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEI   88 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   88 (521)
                      ..+|++.+.||+|+||.||+|+++.  +++.||+|....                                  ..+.+|+
T Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~d~~--~~~~vaiK~~~~----------------------------------~~~~~E~  134 (391)
T PHA03212         91 KAGFSILETFTPGAEGFAFACIDNK--TCEHVVIKAGQR----------------------------------GGTATEA  134 (391)
T ss_pred             cCCcEEEEEEcCCCCeEEEEEEECC--CCCEEEEechhh----------------------------------hhhHHHH
Confidence            4689999999999999999999988  888999997531                                  2357899


Q ss_pred             HHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 009980           89 LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDL  168 (521)
Q Consensus        89 ~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dl  168 (521)
                      .+++++     +||||++++++|..+...++|||++. ++|.+++.....+++.++..++.||+.||.|||++||+||||
T Consensus       135 ~il~~l-----~HpnIv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDi  208 (391)
T PHA03212        135 HILRAI-----NHPSIIQLKGTFTYNKFTCLILPRYK-TDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDI  208 (391)
T ss_pred             HHHHhC-----CCCCCCCEeEEEEECCeeEEEEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence            999999     99999999999999999999999995 689999988888999999999999999999999999999999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCccCCCC--CCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCC
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSSVEGYT--DPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIA  246 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~  246 (521)
                      ||+|||+   +..+.+||+|||+|+.....  ......+||+.|+|||++.+..++.++||||+||++|+|++|..||..
T Consensus       209 KP~NIll---~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~  285 (391)
T PHA03212        209 KAENIFI---NHPGDVCLGDFGAACFPVDINANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFE  285 (391)
T ss_pred             ChHhEEE---cCCCCEEEEeCCcccccccccccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCC
Confidence            9999999   67788999999999753221  223345799999999999998999999999999999999999988754


Q ss_pred             CCc-------HHHHHHHHcCCC----------------------------CCchhhh---hccCHHHHHHHHHhccCCCC
Q 009980          247 QSN-------RQKQQMIMAGEF----------------------------SFYEQTW---KNISSSAKQLISSLLTVDPN  288 (521)
Q Consensus       247 ~~~-------~~~~~~i~~~~~----------------------------~~~~~~~---~~~s~~~~~li~~~l~~dp~  288 (521)
                      ...       ......+.....                            +...+.|   ..++.++.+||.+||+.||.
T Consensus       286 ~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~  365 (391)
T PHA03212        286 KDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAH  365 (391)
T ss_pred             cccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChh
Confidence            321       111111111000                            0001111   23577899999999999999


Q ss_pred             CCCCHHHHHcCCcccCC
Q 009980          289 RRPSAQELLNHPWVIGD  305 (521)
Q Consensus       289 ~R~t~~~~l~h~~~~~~  305 (521)
                      +|||+.++|+||||...
T Consensus       366 ~Rpta~elL~hp~f~~~  382 (391)
T PHA03212        366 HRPSAEALLDFAAFQDI  382 (391)
T ss_pred             hCCCHHHHhcChhhccC
Confidence            99999999999999764

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=4.4e-46  Score=366.49  Aligned_cols=253  Identities=27%  Similarity=0.476  Sum_probs=218.7

Q ss_pred             cccccccCceEEEEeEEcc-CCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHH
Q 009980           15 TDILGRGGFSVVRRGIKKT-CGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRK   93 (521)
Q Consensus        15 ~~~lG~G~~g~V~~a~~~~-~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~   93 (521)
                      ++.||+|+||.||++++.. ..+++.||+|++.+.....                          .......+|+.++++
T Consensus         1 l~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~--------------------------~~~~~~~~E~~~l~~   54 (318)
T cd05582           1 LKVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKV--------------------------RDRVRTKMERDILAE   54 (318)
T ss_pred             CceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhh--------------------------hhHHHHHHHHHHHHh
Confidence            3679999999999998742 1267899999997532211                          122346779999999


Q ss_pred             HhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q 009980           94 IVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENC  173 (521)
Q Consensus        94 l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Ni  173 (521)
                      +     +||||+++++++.+++.+|+||||+.||+|.+++.+...+++..+..++.||+.||.|||++||+||||||+||
T Consensus        55 l-----~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Ni  129 (318)
T cd05582          55 V-----NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENI  129 (318)
T ss_pred             C-----CCCCcccEEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHe
Confidence            8     99999999999999999999999999999999998888899999999999999999999999999999999999


Q ss_pred             EEeeCCCCCCEEEeecCCCccCCCC-CCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCcHHH
Q 009980          174 LFLNDREDSPLKIMDFGLSSVEGYT-DPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQK  252 (521)
Q Consensus       174 l~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~  252 (521)
                      ++   +.++.+||+|||++...... ......+||+.|+|||.+.+..++.++|||||||++|+|++|+.||.+.+..+.
T Consensus       130 l~---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~  206 (318)
T cd05582         130 LL---DEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKET  206 (318)
T ss_pred             EE---CCCCcEEEeeccCCcccCCCCCceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHH
Confidence            99   77788999999999765433 223445799999999999988899999999999999999999999998888888


Q ss_pred             HHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCC-----HHHHHcCCcccCC
Q 009980          253 QQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPS-----AQELLNHPWVIGD  305 (521)
Q Consensus       253 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t-----~~~~l~h~~~~~~  305 (521)
                      ...+.......+    ..+++.+++||.+||+.||.+|||     +.+++.||||...
T Consensus       207 ~~~i~~~~~~~p----~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~  260 (318)
T cd05582         207 MTMILKAKLGMP----QFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTI  260 (318)
T ss_pred             HHHHHcCCCCCC----CCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCC
Confidence            888877766544    457999999999999999999999     7889999999753

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=100.00  E-value=3.9e-45  Score=354.84  Aligned_cols=258  Identities=28%  Similarity=0.411  Sum_probs=208.5

Q ss_pred             ceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHH
Q 009980           11 EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILV   90 (521)
Q Consensus        11 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   90 (521)
                      +|++.+.||+|+||.||+|+++.  +++.||+|.+.......                          .......+|+.+
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~--~~~~~aiK~~~~~~~~~--------------------------~~~~~~~~e~~~   52 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPH--SGHFVALKSVRVQTNED--------------------------GLPLSTVREVAL   52 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECC--CCcEEEEEEeccCcCCC--------------------------CCchHHHHHHHH
Confidence            59999999999999999999998  78899999986532211                          011224567777


Q ss_pred             HHHHhhccCCCCCccceeEEEEe-----CCeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 009980           91 MRKIVENVSPHPNVIDLYDVYED-----QNGVHLILELCSGGELFDRIVAQ--ERYMEVGAAAVIRQIAEGLAALHQANI  163 (521)
Q Consensus        91 l~~l~~~~~~hpniv~~~~~~~~-----~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~al~~lH~~~i  163 (521)
                      ++.+..  .+||||+++++++..     ...+++||||+.+ +|.+++...  ..+++..+..++.|++.||.|||++||
T Consensus        53 l~~l~~--~~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i  129 (288)
T cd07863          53 LKRLEA--FDHPNIVRLMDVCATSRTDRETKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCI  129 (288)
T ss_pred             HHHhhh--cCCCCeeeeeeeeccccCCCCceEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            766521  279999999999864     3468999999975 888888654  348999999999999999999999999


Q ss_pred             eeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCC
Q 009980          164 VHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPP  243 (521)
Q Consensus       164 ~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~p  243 (521)
                      +||||||+||++   +.++.+||+|||++.............||+.|+|||++.+..++.++||||+||++|+|++|.+|
T Consensus       130 vH~dikp~Nili---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~  206 (288)
T cd07863         130 VHRDLKPENILV---TSGGQVKLADFGLARIYSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPL  206 (288)
T ss_pred             ecCCCCHHHEEE---CCCCCEEECccCccccccCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcC
Confidence            999999999999   77788999999999876544444455789999999999988999999999999999999999999


Q ss_pred             CCCCCcHHHHHHHHcCCC-----------------------CCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCC
Q 009980          244 FIAQSNRQKQQMIMAGEF-----------------------SFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHP  300 (521)
Q Consensus       244 f~~~~~~~~~~~i~~~~~-----------------------~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~  300 (521)
                      |.+.........+.....                       .......+.++..++++|.+||+.||.+|||+.+++.||
T Consensus       207 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp  286 (288)
T cd07863         207 FCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHP  286 (288)
T ss_pred             cCCCCHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCC
Confidence            988776655544432110                       001112245788899999999999999999999999999


Q ss_pred             cc
Q 009980          301 WV  302 (521)
Q Consensus       301 ~~  302 (521)
                      ||
T Consensus       287 ~f  288 (288)
T cd07863         287 FF  288 (288)
T ss_pred             CC
Confidence            97

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=100.00  E-value=1.9e-45  Score=355.40  Aligned_cols=252  Identities=25%  Similarity=0.378  Sum_probs=206.2

Q ss_pred             ccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHHhhc
Q 009980           18 LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVEN   97 (521)
Q Consensus        18 lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~   97 (521)
                      ||+|+||+||+|.++.  +++.||+|.+.+.....                         ......+..|+.+++++   
T Consensus         1 lg~G~~g~Vy~~~~~~--~~~~~avK~~~~~~~~~-------------------------~~~~~~~~~E~~il~~l---   50 (280)
T cd05608           1 LGKGGFGEVSACQMRA--TGKLYACKKLNKKRLKK-------------------------RKGYEGAMVEKRILAKV---   50 (280)
T ss_pred             CCCCCceeEEEEEEcc--CCcEEEEEeeeHHHHhh-------------------------hHHHHHHHHHHHHHHhC---
Confidence            7999999999999988  78899999986532211                         01113466799999998   


Q ss_pred             cCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q 009980           98 VSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA----QERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENC  173 (521)
Q Consensus        98 ~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Ni  173 (521)
                        +||||+++++++..++.+|+||||++||+|.+.+..    ...+++..+..++.||+.||.|||++||+||||||+||
T Consensus        51 --~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Ni  128 (280)
T cd05608          51 --HSRFIVSLAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENV  128 (280)
T ss_pred             --CCCcEeeeeEEEcCCCeEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHE
Confidence              999999999999999999999999999999877742    35689999999999999999999999999999999999


Q ss_pred             EEeeCCCCCCEEEeecCCCccCCCCC-CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCcHHH
Q 009980          174 LFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQK  252 (521)
Q Consensus       174 l~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~  252 (521)
                      ++   +.++.++|+|||++....... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||........
T Consensus       129 li---~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~  205 (280)
T cd05608         129 LL---DNDGNVRISDLGLAVELKDGQSKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE  205 (280)
T ss_pred             EE---CCCCCEEEeeCccceecCCCCccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchh
Confidence            99   677889999999997543322 22345789999999999999999999999999999999999999976543322


Q ss_pred             HHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCC-----CHHHHHcCCcccC
Q 009980          253 QQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRP-----SAQELLNHPWVIG  304 (521)
Q Consensus       253 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~-----t~~~~l~h~~~~~  304 (521)
                      ...+.......+......+|+.+.+++.+||+.||++||     |++++++||||++
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~  262 (280)
T cd05608         206 NKELKQRILNDSVTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRD  262 (280)
T ss_pred             HHHHHHhhcccCCCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhc
Confidence            222222111112222356899999999999999999999     8899999999975

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.8e-45  Score=362.47  Aligned_cols=260  Identities=28%  Similarity=0.435  Sum_probs=216.0

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ++|++.+.||+|+||.||+|+++.  +++.||||++.+.....                         ......+.+|+.
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~--~~~~~aiK~~~~~~~~~-------------------------~~~~~~~~~e~~   53 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKN--TGQVYAMKILNKWEMLK-------------------------RAETACFREERD   53 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECC--CCCEEEEEEEEHHHHhh-------------------------hhhHHHHHHHHH
Confidence            579999999999999999999987  78899999997532111                         112344778888


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQANIVHRDL  168 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dl  168 (521)
                      ++..+     +||||+++++++.+++.+|+||||+.||+|.+++.. ...+++..+..++.||+.||.|||++||+||||
T Consensus        54 ~l~~~-----~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dl  128 (331)
T cd05597          54 VLVNG-----DRRWITNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDI  128 (331)
T ss_pred             HHHhC-----CCCCCCceEEEEecCCeEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCC
Confidence            88887     999999999999999999999999999999999976 467999999999999999999999999999999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCccCCCCCC--cccccCCccccccccccc-----CCCCchhhhHHHHHHHHHHHhCC
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSSVEGYTDP--VVGLFGSIDYVSPEALLQ-----DRITSKSDMWSLGVILYILLSGY  241 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwslG~il~~ll~g~  241 (521)
                      ||+|||+   +.++.+||+|||++........  ....+||+.|+|||++..     ..++.++||||+||++|+|++|+
T Consensus       129 kp~Nill---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~  205 (331)
T cd05597         129 KPDNVLL---DKNGHIRLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGE  205 (331)
T ss_pred             CHHHEEE---CCCCCEEEEECCceeecCCCCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCC
Confidence            9999999   7788999999999875433222  122469999999999863     45788999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHHcCCC--CCchhhhhccCHHHHHHHHHhccCCCCC--CCCHHHHHcCCcccCC
Q 009980          242 PPFIAQSNRQKQQMIMAGEF--SFYEQTWKNISSSAKQLISSLLTVDPNR--RPSAQELLNHPWVIGD  305 (521)
Q Consensus       242 ~pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~s~~~~~li~~~l~~dp~~--R~t~~~~l~h~~~~~~  305 (521)
                      .||.+.+..+....+.....  .++. .+..+|..+++||.+||..++.+  |+++.++++||||.+.
T Consensus       206 ~Pf~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~~  272 (331)
T cd05597         206 TPFYAESLVETYGKIMNHKEHFQFPP-DVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEGI  272 (331)
T ss_pred             CCCCCCCHHHHHHHHHcCCCcccCCC-ccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCCCCCC
Confidence            99998887777777765432  2222 23458999999999999764444  7899999999999753

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=100.00  E-value=1.1e-45  Score=364.61  Aligned_cols=251  Identities=27%  Similarity=0.461  Sum_probs=212.9

Q ss_pred             ccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHH-HHHH
Q 009980           16 DILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILV-MRKI   94 (521)
Q Consensus        16 ~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~-l~~l   94 (521)
                      +.||+|+||+||+|+++.  +++.||+|++.+.....                         ......+..|... ++.+
T Consensus         1 ~~lG~G~~g~V~~~~~~~--~~~~~aiK~~~~~~~~~-------------------------~~~~~~~~~e~~~~l~~~   53 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKL--DGKCYAVKVLQKKIVLN-------------------------RKEQKHIMAERNVLLKNV   53 (325)
T ss_pred             CceeeCCCeEEEEEEECC--CCCEEEEEEEEHHHhhh-------------------------hhHHHHHHHHHHHHHHhC
Confidence            469999999999999987  78899999997532111                         0112234444443 4445


Q ss_pred             hhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q 009980           95 VENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCL  174 (521)
Q Consensus        95 ~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil  174 (521)
                           +||||+++++++..++.+|+||||+.||+|..++...+.+++..+..++.||+.||.|||++||+||||||+|||
T Consensus        54 -----~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIl  128 (325)
T cd05604          54 -----KHPFLVGLHYSFQTTEKLYFVLDFVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENIL  128 (325)
T ss_pred             -----CCCCCccEEEEEecCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeE
Confidence                 999999999999999999999999999999999988889999999999999999999999999999999999999


Q ss_pred             EeeCCCCCCEEEeecCCCccCC-CCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCcHHHH
Q 009980          175 FLNDREDSPLKIMDFGLSSVEG-YTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQ  253 (521)
Q Consensus       175 ~~~~~~~~~~kl~Dfg~a~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~  253 (521)
                      +   +.++.+||+|||+++... ........+||+.|+|||++.+..++.++||||+||++|+|++|.+||.+.+..+..
T Consensus       129 l---~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~  205 (325)
T cd05604         129 L---DSQGHVVLTDFGLCKEGIAQSDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMY  205 (325)
T ss_pred             E---CCCCCEEEeecCCcccCCCCCCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHH
Confidence            9   778899999999987532 222334557999999999999999999999999999999999999999998888888


Q ss_pred             HHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCH----HHHHcCCcccCC
Q 009980          254 QMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSA----QELLNHPWVIGD  305 (521)
Q Consensus       254 ~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~----~~~l~h~~~~~~  305 (521)
                      ..+........    +.++..+.++|.+||..+|.+||++    .++++||||...
T Consensus       206 ~~~~~~~~~~~----~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~  257 (325)
T cd05604         206 DNILHKPLVLR----PGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESL  257 (325)
T ss_pred             HHHHcCCccCC----CCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCCC
Confidence            88877655443    3578999999999999999999976    599999999753

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=100.00  E-value=3.2e-45  Score=361.48  Aligned_cols=252  Identities=23%  Similarity=0.389  Sum_probs=210.2

Q ss_pred             ccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHHh
Q 009980           16 DILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIV   95 (521)
Q Consensus        16 ~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~   95 (521)
                      +.||+|+||.||+|+++.  +++.||+|++.+.....                         ......+.+|+.++.++ 
T Consensus         1 ~~lG~G~~g~V~~~~~~~--~~~~~aiK~~~~~~~~~-------------------------~~~~~~~~~e~~~~~~~-   52 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKK--NDQIYAMKVVKKELVHD-------------------------DEDIDWVQTEKHVFEQA-   52 (327)
T ss_pred             CeeeeCCCeEEEEEEECC--CCCEEEEEEEEHHHhhh-------------------------hhHHHHHHHHHHHHHhh-
Confidence            479999999999999987  78899999997643211                         01223466788877776 


Q ss_pred             hccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q 009980           96 ENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLF  175 (521)
Q Consensus        96 ~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~  175 (521)
                         .+||||+++++++.+.+.+|+||||++||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+
T Consensus        53 ---~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili  129 (327)
T cd05617          53 ---SSNPFLVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLL  129 (327)
T ss_pred             ---cCCCCEeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE
Confidence               47999999999999999999999999999999999888899999999999999999999999999999999999999


Q ss_pred             eeCCCCCCEEEeecCCCccCC-CCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCC------
Q 009980          176 LNDREDSPLKIMDFGLSSVEG-YTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQS------  248 (521)
Q Consensus       176 ~~~~~~~~~kl~Dfg~a~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~------  248 (521)
                         +.++.+||+|||+++... ........+||+.|+|||++.+..++.++|||||||++|+|++|..||....      
T Consensus       130 ---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~  206 (327)
T cd05617         130 ---DADGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMN  206 (327)
T ss_pred             ---eCCCCEEEeccccceeccCCCCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccc
Confidence               777889999999987532 2233345679999999999999999999999999999999999999995422      


Q ss_pred             -cHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCC------HHHHHcCCcccCC
Q 009980          249 -NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPS------AQELLNHPWVIGD  305 (521)
Q Consensus       249 -~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t------~~~~l~h~~~~~~  305 (521)
                       .......+.......+    ..+|..+.++|.+||..||.+|++      ++++++||||...
T Consensus       207 ~~~~~~~~~~~~~~~~p----~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~  266 (327)
T cd05617         207 TEDYLFQVILEKPIRIP----RFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSI  266 (327)
T ss_pred             cHHHHHHHHHhCCCCCC----CCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCC
Confidence             1223344444433333    457899999999999999999998      5799999999754

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=100.00  E-value=1.6e-45  Score=363.47  Aligned_cols=251  Identities=28%  Similarity=0.488  Sum_probs=211.9

Q ss_pred             ccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH-HHHHH
Q 009980           16 DILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL-VMRKI   94 (521)
Q Consensus        16 ~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~-~l~~l   94 (521)
                      +.||+|+||.||+|+++.  +++.||+|++.+.....                         ......+..|.. +++.+
T Consensus         1 ~~lg~G~fg~V~~~~~~~--~~~~~aiK~~~~~~~~~-------------------------~~~~~~~~~e~~~~l~~~   53 (325)
T cd05602           1 KVIGKGSFGKVLLARHKA--EEKFYAVKVLQKKAILK-------------------------KKEEKHIMSERNVLLKNV   53 (325)
T ss_pred             CeeeeCCCeEEEEEEECC--CCCEEEEEEEEHHHHHh-------------------------hhHHHHHHHHHHHHHHhC
Confidence            479999999999999987  78899999997532111                         011122333433 34555


Q ss_pred             hhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q 009980           95 VENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCL  174 (521)
Q Consensus        95 ~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil  174 (521)
                           +||||+++++++...+.+|+||||+.||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||
T Consensus        54 -----~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nil  128 (325)
T cd05602          54 -----KHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENIL  128 (325)
T ss_pred             -----CCCCCCceeEEEEcCCeEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeE
Confidence                 999999999999999999999999999999999998888999999999999999999999999999999999999


Q ss_pred             EeeCCCCCCEEEeecCCCccCCC-CCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCcHHHH
Q 009980          175 FLNDREDSPLKIMDFGLSSVEGY-TDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQ  253 (521)
Q Consensus       175 ~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~  253 (521)
                      +   +.++.+||+|||+++.... .......+||+.|+|||++.+..++.++||||+||++|+|++|.+||.+.+..+..
T Consensus       129 i---~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~  205 (325)
T cd05602         129 L---DSQGHIVLTDFGLCKENIEHNGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMY  205 (325)
T ss_pred             E---CCCCCEEEccCCCCcccccCCCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHH
Confidence            9   7788999999999875322 22334557999999999999999999999999999999999999999998888888


Q ss_pred             HHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHH----HHHcCCcccCC
Q 009980          254 QMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQ----ELLNHPWVIGD  305 (521)
Q Consensus       254 ~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~----~~l~h~~~~~~  305 (521)
                      ..+........    +.+++.++++|.+||+.||.+||++.    ++++|+|+...
T Consensus       206 ~~i~~~~~~~~----~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~~  257 (325)
T cd05602         206 DNILNKPLQLK----PNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSPI  257 (325)
T ss_pred             HHHHhCCcCCC----CCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCCC
Confidence            87776654433    46899999999999999999999876    89999999653

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=100.00  E-value=5.5e-45  Score=365.52  Aligned_cols=261  Identities=27%  Similarity=0.398  Sum_probs=212.3

Q ss_pred             ccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHH
Q 009980            5 TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALL   84 (521)
Q Consensus         5 ~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (521)
                      .-.+.++|++.+.||+|+||.||+|.++.  +++.||||++.+.....                          .....+
T Consensus        19 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~--~~~~vaiK~~~~~~~~~--------------------------~~~~~~   70 (364)
T cd07875          19 TFTVLKRYQNLKPIGSGAQGIVCAAYDAI--LERNVAIKKLSRPFQNQ--------------------------THAKRA   70 (364)
T ss_pred             hhchhcceeEEEEeecCCCeEEEEEEECC--CCcEEEEEEeCccccCc--------------------------hhHHHH
Confidence            34567899999999999999999999987  78899999986422111                          123446


Q ss_pred             HHHHHHHHHHhhccCCCCCccceeEEEEeC------CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 009980           85 TNEILVMRKIVENVSPHPNVIDLYDVYEDQ------NGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAAL  158 (521)
Q Consensus        85 ~~E~~~l~~l~~~~~~hpniv~~~~~~~~~------~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~l  158 (521)
                      .+|+.+++.+     +||||+++++++...      ..+|+||||+.+ +|.+.+..  .+++..+..++.|++.||.||
T Consensus        71 ~~E~~~l~~l-----~h~~ii~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~qi~~aL~~L  142 (364)
T cd07875          71 YRELVLMKCV-----NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHL  142 (364)
T ss_pred             HHHHHHHHhc-----CCCCccccceeecccccccccCeEEEEEeCCCC-CHHHHHHh--cCCHHHHHHHHHHHHHHHHHH
Confidence            7899999988     999999999988543      357999999976 67776653  588999999999999999999


Q ss_pred             HHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHH
Q 009980          159 HQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILL  238 (521)
Q Consensus       159 H~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll  238 (521)
                      |++||+||||||+||++   +.++.+||+|||+++............||+.|+|||++.+..++.++|||||||++|+|+
T Consensus       143 H~~~ivH~Dlkp~NIll---~~~~~~kL~DfG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell  219 (364)
T cd07875         143 HSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI  219 (364)
T ss_pred             hhCCeecCCCCHHHEEE---CCCCcEEEEeCCCccccCCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHH
Confidence            99999999999999999   778899999999998765444444567999999999999999999999999999999999


Q ss_pred             hCCCCCCCCCcHHHHHHHHcCCCCCch--------------------------------------hhhhccCHHHHHHHH
Q 009980          239 SGYPPFIAQSNRQKQQMIMAGEFSFYE--------------------------------------QTWKNISSSAKQLIS  280 (521)
Q Consensus       239 ~g~~pf~~~~~~~~~~~i~~~~~~~~~--------------------------------------~~~~~~s~~~~~li~  280 (521)
                      +|+.||.+.+..+....+.........                                      ......+..+++||.
T Consensus       220 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~  299 (364)
T cd07875         220 KGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLS  299 (364)
T ss_pred             hCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHH
Confidence            999999887766555544332111100                                      001123567899999


Q ss_pred             HhccCCCCCCCCHHHHHcCCcccC
Q 009980          281 SLLTVDPNRRPSAQELLNHPWVIG  304 (521)
Q Consensus       281 ~~l~~dp~~R~t~~~~l~h~~~~~  304 (521)
                      +||..||.+|||+.++|+||||..
T Consensus       300 ~mL~~dP~~R~t~~e~L~hp~~~~  323 (364)
T cd07875         300 KMLVIDASKRISVDEALQHPYINV  323 (364)
T ss_pred             HhcCcCcccCCCHHHHhcCccccc
Confidence            999999999999999999999964

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.1e-45  Score=365.64  Aligned_cols=253  Identities=29%  Similarity=0.479  Sum_probs=212.7

Q ss_pred             ccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHHhhc
Q 009980           18 LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVEN   97 (521)
Q Consensus        18 lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~   97 (521)
                      ||+|+||+||+|+++.  +++.||||++.+.....                         .........|..++..+  .
T Consensus         1 lG~G~~g~Vy~~~~~~--~~~~~avK~~~~~~~~~-------------------------~~~~~~~~~e~~~l~~~--~   51 (330)
T cd05586           1 IGKGTFGQVYQVRKKD--TRRIYAMKVLSKKEIVA-------------------------KKEVAHTIGERNILVRT--L   51 (330)
T ss_pred             CCCCCceEEEEEEECC--CCCEEEEEEEeHHHHhh-------------------------hhHHHHHHHHHHHHHHh--c
Confidence            7999999999999987  78899999986532111                         00112234455555554  1


Q ss_pred             cCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEee
Q 009980           98 VSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLN  177 (521)
Q Consensus        98 ~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~~~  177 (521)
                      +.+||||+++++++...+.+|+||||+.||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+  
T Consensus        52 ~~~~p~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili--  129 (330)
T cd05586          52 LDESPFIVGLKFSFQTDSDLYLVTDYMSGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILL--  129 (330)
T ss_pred             cCCCCcCcceEEEEecCCeEEEEEcCCCCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEE--
Confidence            237999999999999999999999999999999999988899999999999999999999999999999999999999  


Q ss_pred             CCCCCCEEEeecCCCccCCCC-CCcccccCCcccccccccccC-CCCchhhhHHHHHHHHHHHhCCCCCCCCCcHHHHHH
Q 009980          178 DREDSPLKIMDFGLSSVEGYT-DPVVGLFGSIDYVSPEALLQD-RITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQM  255 (521)
Q Consensus       178 ~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~  255 (521)
                       +.++.++|+|||++...... ......+||+.|+|||++.+. .++.++||||+||++|+|++|..||.+.+..+....
T Consensus       130 -~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~  208 (330)
T cd05586         130 -DATGHIALCDFGLSKANLTDNKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRN  208 (330)
T ss_pred             -CCCCCEEEecCCcCcCCCCCCCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHH
Confidence             77789999999998753222 223455799999999998754 478999999999999999999999999888888888


Q ss_pred             HHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCC----CHHHHHcCCcccCC
Q 009980          256 IMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRP----SAQELLNHPWVIGD  305 (521)
Q Consensus       256 i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~----t~~~~l~h~~~~~~  305 (521)
                      +..+...++.   ..+++++++||.+||..||.+||    ++.++++||||...
T Consensus       209 i~~~~~~~~~---~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~  259 (330)
T cd05586         209 IAFGKVRFPK---NVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADI  259 (330)
T ss_pred             HHcCCCCCCC---ccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCC
Confidence            8877766553   34799999999999999999998    79999999999753

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>PTZ00284 protein kinase; Provisional

Probab=100.00  E-value=7.1e-45  Score=375.98  Aligned_cols=265  Identities=22%  Similarity=0.341  Sum_probs=208.7

Q ss_pred             cccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      ..++|++.+.||+|+||+||+|.+..  +++.||||+++....                             .......|
T Consensus       127 ~~~~y~i~~~lG~G~fg~V~~a~~~~--~~~~vAvK~i~~~~~-----------------------------~~~~~~~e  175 (467)
T PTZ00284        127 STQRFKILSLLGEGTFGKVVEAWDRK--RKEYCAVKIVRNVPK-----------------------------YTRDAKIE  175 (467)
T ss_pred             CCCcEEEEEEEEeccCEEEEEEEEcC--CCeEEEEEEEecchh-----------------------------hHHHHHHH
Confidence            45789999999999999999999987  788999999864211                             11235567


Q ss_pred             HHHHHHHhhc-cCCCCCccceeEEEEeC-CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCCe
Q 009980           88 ILVMRKIVEN-VSPHPNVIDLYDVYEDQ-NGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ-ANIV  164 (521)
Q Consensus        88 ~~~l~~l~~~-~~~hpniv~~~~~~~~~-~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~-~~i~  164 (521)
                      +.+++.+... ...|+++++++++|... .++|+|||++ |++|.+++...+.+++..+..|+.||+.||.|||+ .||+
T Consensus       176 ~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIi  254 (467)
T PTZ00284        176 IQFMEKVRQADPADRFPLMKIQRYFQNETGHMCIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLM  254 (467)
T ss_pred             HHHHHHHhhcCcccCcceeeeEEEEEcCCceEEEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCee
Confidence            8888777321 23566799999998765 5789999998 77999999888899999999999999999999998 5999


Q ss_pred             eccCCCCcEEEeeCCC-------------CCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHH
Q 009980          165 HRDLKPENCLFLNDRE-------------DSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLG  231 (521)
Q Consensus       165 H~dlkp~Nil~~~~~~-------------~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG  231 (521)
                      ||||||+|||+..++.             ...+||+|||.+....  ......+||+.|+|||++.+..|+.++||||||
T Consensus       255 HrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~--~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlG  332 (467)
T PTZ00284        255 HTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDER--HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMG  332 (467)
T ss_pred             cCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCccccCc--cccccccCCccccCcHHhhcCCCCcHHHHHHHH
Confidence            9999999999943221             1259999999886432  223456799999999999999999999999999


Q ss_pred             HHHHHHHhCCCCCCCCCcHHHHHHHHcCCCCCchhhh------------------------------------h--ccCH
Q 009980          232 VILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTW------------------------------------K--NISS  273 (521)
Q Consensus       232 ~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~------------------------------------~--~~s~  273 (521)
                      |++|+|++|++||.+.+..+....+......++....                                    .  ..++
T Consensus       333 vil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  412 (467)
T PTZ00284        333 CIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDD  412 (467)
T ss_pred             HHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchH
Confidence            9999999999999887765554444332211111000                                    0  0145


Q ss_pred             HHHHHHHHhccCCCCCCCCHHHHHcCCcccCCC
Q 009980          274 SAKQLISSLLTVDPNRRPSAQELLNHPWVIGDS  306 (521)
Q Consensus       274 ~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~  306 (521)
                      .+.+||.+||.+||.+|||++|+|+||||....
T Consensus       413 ~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~~~  445 (467)
T PTZ00284        413 LLCDLIYGLLHYDRQKRLNARQMTTHPYVLKYY  445 (467)
T ss_pred             HHHHHHHHhCCcChhhCCCHHHHhcCccccccC
Confidence            678999999999999999999999999998643

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=100.00  E-value=5.3e-45  Score=364.51  Aligned_cols=264  Identities=27%  Similarity=0.400  Sum_probs=212.0

Q ss_pred             CccccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccH
Q 009980            2 GQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSD   81 (521)
Q Consensus         2 ~~~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (521)
                      |...-.+.++|++.+.||+|+||.||+|.+..  +++.||||.+.+.....                          ...
T Consensus         9 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~--~~~~vaiK~~~~~~~~~--------------------------~~~   60 (355)
T cd07874           9 GDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAV--LDRNVAIKKLSRPFQNQ--------------------------THA   60 (355)
T ss_pred             CchhhhhhhceeEEEEeeecCCEEEEEEEecC--CCceEEEEEeCCcccCh--------------------------HHH
Confidence            34444678999999999999999999999987  78899999986432111                          123


Q ss_pred             HHHHHHHHHHHHHhhccCCCCCccceeEEEEeC------CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHH
Q 009980           82 ALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQ------NGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGL  155 (521)
Q Consensus        82 ~~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~------~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al  155 (521)
                      ..+.+|+.+++.+     +||||+++++++...      ...|+||||+.+ +|.+.+..  .+++..+..++.|++.||
T Consensus        61 ~~~~~E~~~l~~l-----~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~--~l~~~~~~~~~~qi~~aL  132 (355)
T cd07874          61 KRAYRELVLMKCV-----NHKNIISLLNVFTPQKSLEEFQDVYLVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGI  132 (355)
T ss_pred             HHHHHHHHHHHHh-----CCCchhceeeeeeccccccccceeEEEhhhhcc-cHHHHHhh--cCCHHHHHHHHHHHHHHH
Confidence            4467899999998     999999999998654      357999999976 67666643  588999999999999999


Q ss_pred             HHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHH
Q 009980          156 AALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY  235 (521)
Q Consensus       156 ~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~  235 (521)
                      .|||++||+||||||+||++   +.++.+||+|||+++............||+.|+|||++.+..++.++||||+||++|
T Consensus       133 ~~LH~~givHrDikp~Nill---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~  209 (355)
T cd07874         133 KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG  209 (355)
T ss_pred             HHHHhCCcccCCCChHHEEE---CCCCCEEEeeCcccccCCCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHH
Confidence            99999999999999999999   778899999999998765444445567999999999999889999999999999999


Q ss_pred             HHHhCCCCCCCCCcHHHHHHHHcCCCCC--------------------------------------chhhhhccCHHHHH
Q 009980          236 ILLSGYPPFIAQSNRQKQQMIMAGEFSF--------------------------------------YEQTWKNISSSAKQ  277 (521)
Q Consensus       236 ~ll~g~~pf~~~~~~~~~~~i~~~~~~~--------------------------------------~~~~~~~~s~~~~~  277 (521)
                      +|++|+.||.+.+..+....+.......                                      ........+..+++
T Consensus       210 el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (355)
T cd07874         210 EMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARD  289 (355)
T ss_pred             HHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHH
Confidence            9999999998776544333222110000                                      00011224567899


Q ss_pred             HHHHhccCCCCCCCCHHHHHcCCcccC
Q 009980          278 LISSLLTVDPNRRPSAQELLNHPWVIG  304 (521)
Q Consensus       278 li~~~l~~dp~~R~t~~~~l~h~~~~~  304 (521)
                      ||.+||..||.+|||+.++|+||||..
T Consensus       290 li~~mL~~dP~~Rps~~ell~hp~~~~  316 (355)
T cd07874         290 LLSKMLVIDPAKRISVDEALQHPYINV  316 (355)
T ss_pred             HHHHHhcCCchhcCCHHHHhcCcchhc
Confidence            999999999999999999999999974

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=100.00  E-value=3.1e-45  Score=361.01  Aligned_cols=250  Identities=26%  Similarity=0.458  Sum_probs=211.7

Q ss_pred             ccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH-HHHHH
Q 009980           16 DILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL-VMRKI   94 (521)
Q Consensus        16 ~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~-~l~~l   94 (521)
                      +.||+|+||.||+|+++.  +++.||+|++.+.....                         ......+..|.. +++.+
T Consensus         1 ~~lg~G~~g~Vy~~~~~~--~~~~~aiK~~~~~~~~~-------------------------~~~~~~~~~e~~~~l~~~   53 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKS--DGSFYAVKVLQKKTILK-------------------------KKEQNHIMAERNVLLKNL   53 (321)
T ss_pred             CeeeeCCCEEEEEEEECC--CCCEEEEEEEEHHHHHH-------------------------hhHHHHHHHHHHHHHHhC
Confidence            479999999999999987  78899999997532111                         011223444443 45555


Q ss_pred             hhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q 009980           95 VENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCL  174 (521)
Q Consensus        95 ~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil  174 (521)
                           +||||+++++++.+.+..|+||||++|++|...+.....+++..+..++.||+.||.|||++||+||||||+||+
T Consensus        54 -----~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIl  128 (321)
T cd05603          54 -----KHPFLVGLHYSFQTAEKLYFVLDYVNGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENIL  128 (321)
T ss_pred             -----CCCCccceeeEEEcCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeE
Confidence                 999999999999999999999999999999999988888999999999999999999999999999999999999


Q ss_pred             EeeCCCCCCEEEeecCCCccCCC-CCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCcHHHH
Q 009980          175 FLNDREDSPLKIMDFGLSSVEGY-TDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQ  253 (521)
Q Consensus       175 ~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~  253 (521)
                      +   +.++.+||+|||+++.... .......+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+.....
T Consensus       129 l---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~  205 (321)
T cd05603         129 L---DSQGHVVLTDFGLCKEGVEPEETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMY  205 (321)
T ss_pred             E---CCCCCEEEccCCCCccCCCCCCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHH
Confidence            9   7788999999999875322 22234457999999999999889999999999999999999999999998888888


Q ss_pred             HHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCH----HHHHcCCcccC
Q 009980          254 QMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSA----QELLNHPWVIG  304 (521)
Q Consensus       254 ~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~----~~~l~h~~~~~  304 (521)
                      ..+.......+    ...+..+.++|.+||+.||.+||++    .++++||||..
T Consensus       206 ~~i~~~~~~~~----~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~  256 (321)
T cd05603         206 DNILHKPLQLP----GGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSP  256 (321)
T ss_pred             HHHhcCCCCCC----CCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCC
Confidence            88777655443    4578899999999999999999875    59999999974

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=100.00  E-value=1.5e-44  Score=354.35  Aligned_cols=260  Identities=24%  Similarity=0.403  Sum_probs=212.9

Q ss_pred             ccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEI   88 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   88 (521)
                      .++|++.+.||+|+||.||+|+++.  +++.||+|.++......                           ....+.+|+
T Consensus         5 ~~~y~~~~~lg~G~~g~Vy~~~~~~--~~~~vaiK~~~~~~~~~---------------------------~~~~~~~E~   55 (309)
T cd07872           5 METYIKLEKLGEGTYATVFKGRSKL--TENLVALKEIRLEHEEG---------------------------APCTAIREV   55 (309)
T ss_pred             CCceEEEEEecccCCEEEEEEEecC--CCCeEEEEEeeccccCC---------------------------cchhHHHHH
Confidence            4689999999999999999999987  77899999986532211                           122366899


Q ss_pred             HHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecc
Q 009980           89 LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQANIVHRD  167 (521)
Q Consensus        89 ~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~~~i~H~d  167 (521)
                      .+++++     +||||+++++++..++..|+||||+.+ +|.+++... ..+++..+..++.||+.||.|||++||+|||
T Consensus        56 ~~l~~l-----~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~d  129 (309)
T cd07872          56 SLLKDL-----KHANIVTLHDIVHTDKSLTLVFEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRD  129 (309)
T ss_pred             HHHHhC-----CCCCcceEEEEEeeCCeEEEEEeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence            999998     999999999999999999999999976 888877654 4588999999999999999999999999999


Q ss_pred             CCCCcEEEeeCCCCCCEEEeecCCCccCCCCC-CcccccCCccccccccccc-CCCCchhhhHHHHHHHHHHHhCCCCCC
Q 009980          168 LKPENCLFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALLQ-DRITSKSDMWSLGVILYILLSGYPPFI  245 (521)
Q Consensus       168 lkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~ll~g~~pf~  245 (521)
                      |||+||++   +.++.+||+|||++....... ......+|+.|+|||.+.+ ..++.++||||+||++|+|++|++||.
T Consensus       130 lkp~Nill---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~  206 (309)
T cd07872         130 LKPQNLLI---NERGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFP  206 (309)
T ss_pred             CCHHHEEE---CCCCCEEECccccceecCCCccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence            99999999   777889999999997543222 2233468999999998865 468899999999999999999999998


Q ss_pred             CCCcHHHHHHHHcCCCCCch--------------------------hhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          246 AQSNRQKQQMIMAGEFSFYE--------------------------QTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       246 ~~~~~~~~~~i~~~~~~~~~--------------------------~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      +.+..+....+.........                          .....+++++++||.+||..||.+|||+.++|+|
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h  286 (309)
T cd07872         207 GSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKH  286 (309)
T ss_pred             CCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcC
Confidence            87766554444322111100                          1123578899999999999999999999999999


Q ss_pred             CcccCCC
Q 009980          300 PWVIGDS  306 (521)
Q Consensus       300 ~~~~~~~  306 (521)
                      |||....
T Consensus       287 ~~~~~~~  293 (309)
T cd07872         287 AYFRSLG  293 (309)
T ss_pred             hhhhhcc
Confidence            9998644

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=100.00  E-value=8.9e-45  Score=375.39  Aligned_cols=261  Identities=25%  Similarity=0.418  Sum_probs=221.6

Q ss_pred             ccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHH
Q 009980            5 TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALL   84 (521)
Q Consensus         5 ~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (521)
                      .....++|++.+.||+|+||+||+|++..  +++.||||++.......                          .....+
T Consensus        27 ~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~--~g~~vAvK~i~~~~~~~--------------------------~~~~~~   78 (496)
T PTZ00283         27 AKEQAKKYWISRVLGSGATGTVLCAKRVS--DGEPFAVKVVDMEGMSE--------------------------ADKNRA   78 (496)
T ss_pred             ccccCCCEEEEEEEecCCCEEEEEEEEcC--CCCEEEEEEEecccCCH--------------------------HHHHHH
Confidence            34566899999999999999999999987  78899999986533211                          123456


Q ss_pred             HHHHHHHHHHhhccCCCCCccceeEEEEeCC--------eEEEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHH
Q 009980           85 TNEILVMRKIVENVSPHPNVIDLYDVYEDQN--------GVHLILELCSGGELFDRIVA----QERYMEVGAAAVIRQIA  152 (521)
Q Consensus        85 ~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~--------~~~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qil  152 (521)
                      .+|+..+..+     +||||+++++.+....        .+++||||+.+|+|.+++..    ...+++..+..++.|++
T Consensus        79 ~~Ei~~l~~~-----~h~~iv~~~~~~~~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll  153 (496)
T PTZ00283         79 QAEVCCLLNC-----DFFSIVKCHEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVL  153 (496)
T ss_pred             HHHHHHHhcC-----CCCcEEEeecceecccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHH
Confidence            7888888887     9999999998875432        37899999999999998864    34689999999999999


Q ss_pred             HHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCC---CCcccccCCcccccccccccCCCCchhhhHH
Q 009980          153 EGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYT---DPVVGLFGSIDYVSPEALLQDRITSKSDMWS  229 (521)
Q Consensus       153 ~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~Diws  229 (521)
                      .||.|||++||+||||||+|||+   +.++.+||+|||+++.....   ......+||+.|+|||++.+..++.++||||
T Consensus       154 ~aL~~lH~~~IiHrDLKP~NILl---~~~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwS  230 (496)
T PTZ00283        154 LAVHHVHSKHMIHRDIKSANILL---CSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFS  230 (496)
T ss_pred             HHHHHHHhCCEecCCCCHHHEEE---eCCCCEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHH
Confidence            99999999999999999999999   67889999999999764322   1223457999999999999989999999999


Q ss_pred             HHHHHHHHHhCCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccC
Q 009980          230 LGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIG  304 (521)
Q Consensus       230 lG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~  304 (521)
                      |||++|+|++|+.||.+.+..+....+..+.....   ...+++++.+++.+||..||.+|||+.++++|||++.
T Consensus       231 lGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~  302 (496)
T PTZ00283        231 LGVLLYELLTLKRPFDGENMEEVMHKTLAGRYDPL---PPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKL  302 (496)
T ss_pred             HHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCC---CCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHH
Confidence            99999999999999998888888777777655432   3568999999999999999999999999999999864

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=1.4e-44  Score=373.73  Aligned_cols=256  Identities=27%  Similarity=0.428  Sum_probs=219.5

Q ss_pred             cccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      ....|.+.+.||+|++|.||+|.+..+ .+..||+|.+.....                            .....+.+|
T Consensus        65 ~~~~y~~~~~lg~G~~g~vy~a~~~~~-~~~~vv~K~~~~~~~----------------------------~~~~~~~~E  115 (478)
T PTZ00267         65 REHMYVLTTLVGRNPTTAAFVATRGSD-PKEKVVAKFVMLNDE----------------------------RQAAYARSE  115 (478)
T ss_pred             cceeEEEEEEEEeCCCcEEEEEEEcCC-CCeEEEEEEcccCCH----------------------------HHHHHHHHH
Confidence            345599999999999999999998762 267889997643211                            123456789


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA----QERYMEVGAAAVIRQIAEGLAALHQANI  163 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qil~al~~lH~~~i  163 (521)
                      +.+++.+     +||||+++++++..++.+||||||++||+|.+++..    ..++++.++..++.||+.||.|||++||
T Consensus       116 ~~~l~~l-----~Hpniv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i  190 (478)
T PTZ00267        116 LHCLAAC-----DHFGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKM  190 (478)
T ss_pred             HHHHHhC-----CCCCEeEEEEEEEECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence            9999998     999999999999999999999999999999887753    4568999999999999999999999999


Q ss_pred             eeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC---CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhC
Q 009980          164 VHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD---PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSG  240 (521)
Q Consensus       164 ~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g  240 (521)
                      +||||||+|||+   +.++.+||+|||+|+......   .....+||+.|+|||++.+..++.++||||+||++|+|++|
T Consensus       191 vHrDlkp~NIll---~~~~~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg  267 (478)
T PTZ00267        191 MHRDLKSANIFL---MPTGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTL  267 (478)
T ss_pred             EECCcCHHhEEE---CCCCcEEEEeCcCceecCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhC
Confidence            999999999999   778899999999998654322   13345799999999999988999999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCccc
Q 009980          241 YPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVI  303 (521)
Q Consensus       241 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~  303 (521)
                      +.||.+.+..+....+..+.....   ...++++++++|.+||..||++|||+.+++.|||+.
T Consensus       268 ~~Pf~~~~~~~~~~~~~~~~~~~~---~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~  327 (478)
T PTZ00267        268 HRPFKGPSQREIMQQVLYGKYDPF---PCPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFLK  327 (478)
T ss_pred             CCCCCCCCHHHHHHHHHhCCCCCC---CccCCHHHHHHHHHHhccChhhCcCHHHHHhCHHHH
Confidence            999998888888888777665422   245889999999999999999999999999999985

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=100.00  E-value=3.5e-45  Score=349.52  Aligned_cols=255  Identities=35%  Similarity=0.623  Sum_probs=212.0

Q ss_pred             eeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHH
Q 009980           12 YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVM   91 (521)
Q Consensus        12 Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l   91 (521)
                      |++++.||+|+||+||+|++..  +++.||+|++.......                          .......+|+.++
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~--~~~~~~~K~~~~~~~~~--------------------------~~~~~~~~e~~~~   52 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKK--NGQKVAVKIIDKSEIEE--------------------------EEREENIREIKIL   52 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETT--TTEEEEEEEEESTTHHH--------------------------HHHHHHHHHHHHH
T ss_pred             CEEeEEEEeCCCEEEEEEEECC--CCeEEEEEEeccccccc--------------------------cccchhhhhhhcc
Confidence            8999999999999999999998  78899999997643211                          1112234589999


Q ss_pred             HHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCC
Q 009980           92 RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPE  171 (521)
Q Consensus        92 ~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~  171 (521)
                      +++     +||||+++++++......++||||+.+++|.+++...+.+++..+..++.||+.||.+||++||+|+||||+
T Consensus        53 ~~l-----~~~~i~~~~~~~~~~~~~~~v~~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~  127 (260)
T PF00069_consen   53 RRL-----RHPNIVQILDVFQDDNYLYIVMEYCPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPE  127 (260)
T ss_dssp             HHH-----TBTTBCHEEEEEEESSEEEEEEEEETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGG
T ss_pred             ccc-----cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            999     999999999999999999999999999999999998889999999999999999999999999999999999


Q ss_pred             cEEEeeCCCCCCEEEeecCCCccC-CCCCCcccccCCcccccccccc-cCCCCchhhhHHHHHHHHHHHhCCCCCCCCCc
Q 009980          172 NCLFLNDREDSPLKIMDFGLSSVE-GYTDPVVGLFGSIDYVSPEALL-QDRITSKSDMWSLGVILYILLSGYPPFIAQSN  249 (521)
Q Consensus       172 Nil~~~~~~~~~~kl~Dfg~a~~~-~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~  249 (521)
                      ||++   +.++.++|+|||.+... ..........+++.|+|||++. +..++.++|+||||+++|+|++|..||.....
T Consensus       128 NIl~---~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~  204 (260)
T PF00069_consen  128 NILL---DENGEVKLIDFGSSVKLSENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNS  204 (260)
T ss_dssp             GEEE---STTSEEEESSGTTTEESTSTTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSH
T ss_pred             cccc---ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            9999   77888999999999752 2233344567899999999998 77889999999999999999999999988733


Q ss_pred             HHH---HHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcc
Q 009980          250 RQK---QQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV  302 (521)
Q Consensus       250 ~~~---~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~  302 (521)
                      ...   ...............+...++.+.++|.+||+.||++|||+.++++||||
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~  260 (260)
T PF00069_consen  205 DDQLEIIEKILKRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLKHPWF  260 (260)
T ss_dssp             HHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred             hhhhhhhhhcccccccccccccchhHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence            332   22222222221111112234899999999999999999999999999997

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=100.00  E-value=8.5e-45  Score=351.66  Aligned_cols=259  Identities=29%  Similarity=0.456  Sum_probs=213.0

Q ss_pred             ceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHH
Q 009980           11 EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILV   90 (521)
Q Consensus        11 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   90 (521)
                      .|++.+.||+|+||.||+|.++.  +++.||||.+.+.....                         ......+.+|+.+
T Consensus         1 ~f~~~~~ig~G~~g~v~~~~~~~--~~~~~avK~~~~~~~~~-------------------------~~~~~~~~~E~~i   53 (285)
T cd05630           1 TFRQYRVLGKGGFGEVCACQVRA--TGKMYACKKLEKKRIKK-------------------------RKGESMALNEKQI   53 (285)
T ss_pred             CceeeEEeecCCCeEEEEEEEcC--CCceEEEEEEehhhccc-------------------------hHHHHHHHHHHHH
Confidence            47888999999999999999998  78899999986533211                         0112346789999


Q ss_pred             HHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 009980           91 MRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ--ERYMEVGAAAVIRQIAEGLAALHQANIVHRDL  168 (521)
Q Consensus        91 l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~al~~lH~~~i~H~dl  168 (521)
                      ++++     +||||+++++.+.+.+.+|+||||+.|++|.+++...  ..+++..+..++.|++.||.|||+.||+||||
T Consensus        54 l~~l-----~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~di  128 (285)
T cd05630          54 LEKV-----NSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDL  128 (285)
T ss_pred             HHhC-----CCCCeeeeeEEEecCCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCC
Confidence            9998     9999999999999999999999999999999888643  35899999999999999999999999999999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCC
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQS  248 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~  248 (521)
                      ||+||++   +.++.++|+|||++.............||+.|+|||.+.+..++.++||||+||++|+|++|.+||....
T Consensus       129 kp~Nil~---~~~~~~~l~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~  205 (285)
T cd05630         129 KPENILL---DDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRK  205 (285)
T ss_pred             CHHHEEE---CCCCCEEEeeccceeecCCCccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCC
Confidence            9999999   7778899999999876543333344579999999999998899999999999999999999999998654


Q ss_pred             cHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCC-----HHHHHcCCcccC
Q 009980          249 NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPS-----AQELLNHPWVIG  304 (521)
Q Consensus       249 ~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t-----~~~~l~h~~~~~  304 (521)
                      ......................+++++++|+.+||+.||.+|||     ++++++||||..
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~  266 (285)
T cd05630         206 KKIKREEVERLVKEVQEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQ  266 (285)
T ss_pred             ccchHHHHHhhhhhhhhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhc
Confidence            32211111111111111223568899999999999999999999     999999999975

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=100.00  E-value=2.3e-44  Score=356.09  Aligned_cols=260  Identities=22%  Similarity=0.332  Sum_probs=215.3

Q ss_pred             cccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      ..++|++.+.||.|+||.||+|.++.  ++..+|+|++.....                           ......+.+|
T Consensus         3 ~~~~y~~~~~lg~g~~g~V~~~~~~~--~~~~~a~k~~~~~~~---------------------------~~~~~~~~~E   53 (333)
T cd06650           3 KDDDFEKISELGAGNGGVVFKVSHKP--SGLIMARKLIHLEIK---------------------------PAIRNQIIRE   53 (333)
T ss_pred             chhhhheeccccCCCCEEEEEEEECC--CCcEEEEEEeecccC---------------------------HHHHHHHHHH
Confidence            46899999999999999999999987  778899999864211                           0123457899


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CCeec
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQA-NIVHR  166 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~-~i~H~  166 (521)
                      +.+++++     +||||+++++++.+++.+|+||||+.|++|.+++...+.+++..+..++.|++.||.|||++ +|+||
T Consensus        54 ~~~l~~l-----~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~  128 (333)
T cd06650          54 LQVLHEC-----NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR  128 (333)
T ss_pred             HHHHHHC-----CCCcccceeEEEEECCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEec
Confidence            9999998     99999999999999999999999999999999999888899999999999999999999985 79999


Q ss_pred             cCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCC
Q 009980          167 DLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIA  246 (521)
Q Consensus       167 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~  246 (521)
                      ||||+|||+   +.++.+||+|||++...... ......||+.|+|||++.+..++.++|+||+||++|+|++|+.||..
T Consensus       129 dlkp~Nili---~~~~~~kL~Dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~  204 (333)
T cd06650         129 DVKPSNILV---NSRGEIKLCDFGVSGQLIDS-MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPP  204 (333)
T ss_pred             CCChhhEEE---cCCCCEEEeeCCcchhhhhh-ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence            999999999   67788999999998754321 22345689999999999988899999999999999999999999976


Q ss_pred             CCcHHHHHHHH--------------------------------------------cCCCCCchhhhhccCHHHHHHHHHh
Q 009980          247 QSNRQKQQMIM--------------------------------------------AGEFSFYEQTWKNISSSAKQLISSL  282 (521)
Q Consensus       247 ~~~~~~~~~i~--------------------------------------------~~~~~~~~~~~~~~s~~~~~li~~~  282 (521)
                      .........+.                                            ....  +......++.++++||.+|
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~  282 (333)
T cd06650         205 PDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPP--PKLPSGVFGAEFQDFVNKC  282 (333)
T ss_pred             cchhHHHHHhcCcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCC--ccCCCCCcCHHHHHHHHHh
Confidence            55433322110                                            0000  0000013578899999999


Q ss_pred             ccCCCCCCCCHHHHHcCCcccCCCC
Q 009980          283 LTVDPNRRPSAQELLNHPWVIGDSA  307 (521)
Q Consensus       283 l~~dp~~R~t~~~~l~h~~~~~~~~  307 (521)
                      |..||++|||+.+++.||||+....
T Consensus       283 L~~~P~~Rpt~~ell~h~~~~~~~~  307 (333)
T cd06650         283 LIKNPAERADLKQLMVHAFIKRSEA  307 (333)
T ss_pred             ccCCcccCcCHHHHhhCHHHhcCcc
Confidence            9999999999999999999986543

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=100.00  E-value=5.5e-45  Score=360.44  Aligned_cols=261  Identities=28%  Similarity=0.427  Sum_probs=217.6

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ++|++.+.||+|+||.||+|+++.  +++.||+|++.+.....                         ......+.+|+.
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~--~~~~~aiK~~~~~~~~~-------------------------~~~~~~~~~e~~   53 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKH--TERIYAMKILNKWEMLK-------------------------RAETACFREERN   53 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECC--CCCEEEEEEEeHHHHHh-------------------------hHHHHHHHHHHH
Confidence            589999999999999999999987  78899999986532110                         112334677888


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQANIVHRDL  168 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dl  168 (521)
                      ++..+     +||||+++++++.+.+..|+||||+.||+|.+++.. ...+++..+..++.|++.||.|||++||+||||
T Consensus        54 ~l~~~-----~~~~i~~l~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDl  128 (331)
T cd05624          54 VLVNG-----DCQWITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDI  128 (331)
T ss_pred             HHHhC-----CCCCEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccC
Confidence            88877     999999999999999999999999999999999987 467999999999999999999999999999999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCccCCCCCCc--ccccCCccccccccccc-----CCCCchhhhHHHHHHHHHHHhCC
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSSVEGYTDPV--VGLFGSIDYVSPEALLQ-----DRITSKSDMWSLGVILYILLSGY  241 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~--~~~~gt~~y~aPE~~~~-----~~~~~~~DiwslG~il~~ll~g~  241 (521)
                      ||+|||+   +.++.+||+|||++.........  ...+||+.|+|||++.+     +.++.++||||+||++|+|++|+
T Consensus       129 kp~Nill---~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~  205 (331)
T cd05624         129 KPDNVLL---DMNGHIRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE  205 (331)
T ss_pred             chHHEEE---cCCCCEEEEeccceeeccCCCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCC
Confidence            9999999   77888999999999765432221  23469999999999875     46788999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHHcCCCCCc-hhhhhccCHHHHHHHHHhccCCCCC--CCCHHHHHcCCcccCC
Q 009980          242 PPFIAQSNRQKQQMIMAGEFSFY-EQTWKNISSSAKQLISSLLTVDPNR--RPSAQELLNHPWVIGD  305 (521)
Q Consensus       242 ~pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~s~~~~~li~~~l~~dp~~--R~t~~~~l~h~~~~~~  305 (521)
                      .||.+.+..+....+......++ ...+..++.+++++|.+||..++.+  |++++++++||||...
T Consensus       206 ~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~~  272 (331)
T cd05624         206 TPFYAESLVETYGKIMNHEERFQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGI  272 (331)
T ss_pred             CCccCCCHHHHHHHHHcCCCcccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCCC
Confidence            99998887777777766543222 2223568999999999999876654  4799999999999753

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=100.00  E-value=6.7e-45  Score=360.09  Aligned_cols=261  Identities=26%  Similarity=0.428  Sum_probs=217.2

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ++|++.+.||+|+||.||+++++.  +++.||+|++.+.....                         ......+.+|+.
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~--~~~~~aiK~~~~~~~~~-------------------------~~~~~~~~~e~~   53 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKN--ADKVFAMKILNKWEMLK-------------------------RAETACFREERD   53 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECC--CCCEEEEEEEeHHHHHH-------------------------hhHHHHHHHHHH
Confidence            579999999999999999999987  78899999986522110                         112234677888


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQANIVHRDL  168 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dl  168 (521)
                      ++..+     +||||+++++++.+.+.+|+||||+.||+|.+++.. ...+++..++.++.||+.||.|||++||+||||
T Consensus        54 ~l~~~-----~~~~i~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDl  128 (332)
T cd05623          54 VLVNG-----DNQWITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDI  128 (332)
T ss_pred             HHhhC-----CCCCEeeEEEEEecCCEEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCC
Confidence            88777     999999999999999999999999999999999976 467899999999999999999999999999999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCccCCCCCC--cccccCCcccccccccc-----cCCCCchhhhHHHHHHHHHHHhCC
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSSVEGYTDP--VVGLFGSIDYVSPEALL-----QDRITSKSDMWSLGVILYILLSGY  241 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslG~il~~ll~g~  241 (521)
                      ||+|||+   +.++.+||+|||++........  ....+||+.|+|||++.     ...++.++||||+||++|+|++|+
T Consensus       129 kp~Nili---~~~~~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~  205 (332)
T cd05623         129 KPDNILM---DMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGE  205 (332)
T ss_pred             CHHHEEE---CCCCCEEEeecchheecccCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCC
Confidence            9999999   7788999999999875432221  22357999999999986     346889999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHHcCCCCCc-hhhhhccCHHHHHHHHHhccCCCCC--CCCHHHHHcCCcccCC
Q 009980          242 PPFIAQSNRQKQQMIMAGEFSFY-EQTWKNISSSAKQLISSLLTVDPNR--RPSAQELLNHPWVIGD  305 (521)
Q Consensus       242 ~pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~s~~~~~li~~~l~~dp~~--R~t~~~~l~h~~~~~~  305 (521)
                      .||.+.+..+....+......+. ...+..+|+++++|+.+||..+|.+  |+++.++++||||.+.
T Consensus       206 ~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~~  272 (332)
T cd05623         206 TPFYAESLVETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTGI  272 (332)
T ss_pred             CCCCCCCHHHHHHHHhCCCccccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCCC
Confidence            99999888888887776543222 1223568999999999999765554  6899999999999764

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.7e-46  Score=364.10  Aligned_cols=263  Identities=26%  Similarity=0.406  Sum_probs=224.1

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      +..+.|+|++.||.|+||.||+|.++.  ++-..|.|+|....-                            ..-..+.-
T Consensus        29 nP~d~WeIiGELGDGAFGKVyKA~nke--t~~lAAaKvIetkse----------------------------EELEDylV   78 (1187)
T KOG0579|consen   29 NPRDHWEIIGELGDGAFGKVYKAVNKE--TKLLAAAKVIETKSE----------------------------EELEDYLV   78 (1187)
T ss_pred             CHHHHHHHHhhhcCccchhhhhhhccc--chhhhhhhhhcccch----------------------------hHHhhhhh
Confidence            345789999999999999999999997  777778888853211                            11233677


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      ||.||..+     +||+||++++.|...+.++|+.|||.||-.-..+.. ...+++.++..+++|+|.||.|||+++|+|
T Consensus        79 EIeILa~C-----dHP~ivkLl~ayy~enkLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIH  153 (1187)
T KOG0579|consen   79 EIEILAEC-----DHPVIVKLLSAYYFENKLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIH  153 (1187)
T ss_pred             hhhhhhcC-----CChHHHHHHHHHhccCceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhh
Confidence            99999988     999999999999999999999999999988776654 456999999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCC-CCCCcccccCCcccccccccc-----cCCCCchhhhHHHHHHHHHHHh
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEG-YTDPVVGLFGSIDYVSPEALL-----QDRITSKSDMWSLGVILYILLS  239 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~-~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslG~il~~ll~  239 (521)
                      ||||+.|||+   ..+|.++|+|||.+.... ......+++|||+|||||++.     ..+|+.++||||||++|.+|..
T Consensus       154 RDLKAGNiL~---TldGdirLADFGVSAKn~~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAq  230 (1187)
T KOG0579|consen  154 RDLKAGNILL---TLDGDIRLADFGVSAKNKSTRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQ  230 (1187)
T ss_pred             hhccccceEE---EecCcEeeecccccccchhHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhc
Confidence            9999999999   677889999999886432 223445678999999999864     4689999999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCCCc
Q 009980          240 GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAK  308 (521)
Q Consensus       240 g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~~~  308 (521)
                      +.||....+....+-.|.+..++...+ +...|..+.+|+.+||.+||..||++.++|+|||+.+...+
T Consensus       231 iEPPHhelnpMRVllKiaKSePPTLlq-PS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~~Sn  298 (1187)
T KOG0579|consen  231 IEPPHHELNPMRVLLKIAKSEPPTLLQ-PSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNAPSN  298 (1187)
T ss_pred             cCCCccccchHHHHHHHhhcCCCcccC-cchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcccccCCcc
Confidence            999999999998888888877654332 35678999999999999999999999999999999865443

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=100.00  E-value=7.3e-45  Score=362.97  Aligned_cols=258  Identities=30%  Similarity=0.429  Sum_probs=207.8

Q ss_pred             cccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      ..++|++.+.||+|+||.||+|+++.  +++.||||++.....                           ......+.+|
T Consensus        72 ~~~~~~~~~~lg~G~~g~V~~~~~~~--~~~~vaiK~~~~~~~---------------------------~~~~~~~~~E  122 (353)
T PLN00034         72 SLSELERVNRIGSGAGGTVYKVIHRP--TGRLYALKVIYGNHE---------------------------DTVRRQICRE  122 (353)
T ss_pred             CHHHHhhhhhccCCCCeEEEEEEECC--CCCEEEEEEEecCCc---------------------------HHHHHHHHHH
Confidence            35689999999999999999999987  788999999854211                           1123457899


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecc
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRD  167 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~d  167 (521)
                      +.+++.+     +||||+++++++...+.+|+||||+.|++|.+.    ...++..+..++.||+.||.|||++||+|||
T Consensus       123 ~~~l~~l-----~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrD  193 (353)
T PLN00034        123 IEILRDV-----NHPNVVKCHDMFDHNGEIQVLLEFMDGGSLEGT----HIADEQFLADVARQILSGIAYLHRRHIVHRD  193 (353)
T ss_pred             HHHHHhC-----CCCCcceeeeEeccCCeEEEEEecCCCCccccc----ccCCHHHHHHHHHHHHHHHHHHHHCCEeecC
Confidence            9999998     999999999999999999999999999998643    3457888899999999999999999999999


Q ss_pred             CCCCcEEEeeCCCCCCEEEeecCCCccCCCCC-CcccccCCccccccccccc-----CCCCchhhhHHHHHHHHHHHhCC
Q 009980          168 LKPENCLFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALLQ-----DRITSKSDMWSLGVILYILLSGY  241 (521)
Q Consensus       168 lkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwslG~il~~ll~g~  241 (521)
                      |||+|||+   +.++.+||+|||+++...... ......||+.|+|||++..     ..++.++|||||||++|+|++|+
T Consensus       194 lkp~NIll---~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~  270 (353)
T PLN00034        194 IKPSNLLI---NSAKNVKIADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGR  270 (353)
T ss_pred             CCHHHEEE---cCCCCEEEcccccceecccccccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCC
Confidence            99999999   777899999999997653221 2234579999999998743     23456899999999999999999


Q ss_pred             CCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCC
Q 009980          242 PPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDS  306 (521)
Q Consensus       242 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~  306 (521)
                      .||...........+..............++.++++||.+||..||++|||+.++++||||....
T Consensus       271 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~~  335 (353)
T PLN00034        271 FPFGVGRQGDWASLMCAICMSQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRAQ  335 (353)
T ss_pred             CCCCCCCCccHHHHHHHHhccCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCcccccCC
Confidence            99975433332222211111112222356899999999999999999999999999999998653

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=100.00  E-value=1.7e-44  Score=348.05  Aligned_cols=250  Identities=23%  Similarity=0.375  Sum_probs=207.0

Q ss_pred             ccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHHhhc
Q 009980           18 LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVEN   97 (521)
Q Consensus        18 lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~   97 (521)
                      ||+|+||.||+|+++.  +++.||+|.+.+.....                         .........|+.+++++   
T Consensus         1 lg~G~~g~Vy~~~~~~--~~~~~a~K~~~~~~~~~-------------------------~~~~~~~~~E~~il~~l---   50 (277)
T cd05607           1 LGKGGFGEVCAVQVKN--TGKMYACKKLDKKRLKK-------------------------KSGEKMALLEKEILEKV---   50 (277)
T ss_pred             CCCCCceEEEEEEEcc--CCcEEEEEEEcHHHhhc-------------------------chhhHHHHHHHHHHHhc---
Confidence            7999999999999988  78899999986532211                         01123355689999998   


Q ss_pred             cCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q 009980           98 VSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE--RYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLF  175 (521)
Q Consensus        98 ~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~  175 (521)
                        +||||++++++++++..+|+||||+.|++|.+++....  .+++..+..++.|++.||.|||++||+||||||+||++
T Consensus        51 --~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili  128 (277)
T cd05607          51 --NSPFIVNLAYAFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLL  128 (277)
T ss_pred             --CCCcEEEEEEEEecCCeEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEE
Confidence              99999999999999999999999999999988886543  58889999999999999999999999999999999999


Q ss_pred             eeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCcH----H
Q 009980          176 LNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNR----Q  251 (521)
Q Consensus       176 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~----~  251 (521)
                         +.++.++|+|||++.............||+.|+|||++.+..++.++||||+||++|+|++|..||......    +
T Consensus       129 ---~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~  205 (277)
T cd05607         129 ---DDQGNCRLSDLGLAVELKDGKTITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEE  205 (277)
T ss_pred             ---cCCCCEEEeeceeeeecCCCceeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHH
Confidence               677889999999987654443334457899999999999888999999999999999999999999765432    2


Q ss_pred             HHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCH----HHHHcCCcccCC
Q 009980          252 KQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSA----QELLNHPWVIGD  305 (521)
Q Consensus       252 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~----~~~l~h~~~~~~  305 (521)
                      .............   ...+++++++++.+||+.||.+|||+    ++++.||||..-
T Consensus       206 ~~~~~~~~~~~~~---~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~  260 (277)
T cd05607         206 LKRRTLEDEVKFE---HQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTI  260 (277)
T ss_pred             HHHHhhccccccc---cccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCC
Confidence            3333333333222   24589999999999999999999999    778899999753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=100.00  E-value=3.2e-44  Score=353.39  Aligned_cols=252  Identities=26%  Similarity=0.401  Sum_probs=195.4

Q ss_pred             cccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHH
Q 009980           15 TDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKI   94 (521)
Q Consensus        15 ~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l   94 (521)
                      ++.||+|+||+||+|+++...+++.||+|.+.....                              .....+|+.+++++
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~------------------------------~~~~~~E~~~l~~l   55 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI------------------------------SMSACREIALLREL   55 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC------------------------------cHHHHHHHHHHHhc
Confidence            568999999999999987655778999999854221                              12367899999999


Q ss_pred             hhccCCCCCccceeEEEEe--CCeEEEEEeccCCCchHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 009980           95 VENVSPHPNVIDLYDVYED--QNGVHLILELCSGGELFDRIVAQ---------ERYMEVGAAAVIRQIAEGLAALHQANI  163 (521)
Q Consensus        95 ~~~~~~hpniv~~~~~~~~--~~~~~lv~e~~~gg~L~~~l~~~---------~~~~~~~~~~i~~qil~al~~lH~~~i  163 (521)
                           +||||+++++++..  +..+|+||||+.+ +|.+.+...         ..+++..++.++.||+.||.|||++||
T Consensus        56 -----~h~niv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~i  129 (317)
T cd07868          56 -----KHPNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWV  129 (317)
T ss_pred             -----CCCCCcceeeeEecCCCcEEEEEEeccCC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence                 99999999999854  4578999999965 888777532         258999999999999999999999999


Q ss_pred             eeccCCCCcEEEeeC-CCCCCEEEeecCCCccCCCCC----CcccccCCccccccccccc-CCCCchhhhHHHHHHHHHH
Q 009980          164 VHRDLKPENCLFLND-REDSPLKIMDFGLSSVEGYTD----PVVGLFGSIDYVSPEALLQ-DRITSKSDMWSLGVILYIL  237 (521)
Q Consensus       164 ~H~dlkp~Nil~~~~-~~~~~~kl~Dfg~a~~~~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~l  237 (521)
                      +||||||+|||+... +..+.+||+|||+|+......    ......||+.|+|||++.+ ..++.++||||+||++|+|
T Consensus       130 vHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el  209 (317)
T cd07868         130 LHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAEL  209 (317)
T ss_pred             EcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHH
Confidence            999999999999543 345789999999997653221    2234578999999999876 4589999999999999999


Q ss_pred             HhCCCCCCCCCcH---------HHHHHHHcCCCCCchh----------------------------------hhhccCHH
Q 009980          238 LSGYPPFIAQSNR---------QKQQMIMAGEFSFYEQ----------------------------------TWKNISSS  274 (521)
Q Consensus       238 l~g~~pf~~~~~~---------~~~~~i~~~~~~~~~~----------------------------------~~~~~s~~  274 (521)
                      ++|++||......         .....+..........                                  .....+..
T Consensus       210 ~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (317)
T cd07868         210 LTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSK  289 (317)
T ss_pred             HhCCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChH
Confidence            9999999654321         1111111110000000                                  00123567


Q ss_pred             HHHHHHHhccCCCCCCCCHHHHHcCCcc
Q 009980          275 AKQLISSLLTVDPNRRPSAQELLNHPWV  302 (521)
Q Consensus       275 ~~~li~~~l~~dp~~R~t~~~~l~h~~~  302 (521)
                      +.+||.+||+.||.+|||++++|+||||
T Consensus       290 ~~dli~~mL~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07868         290 AFHLLQKLLTMDPIKRITSEQAMQDPYF  317 (317)
T ss_pred             HHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence            8999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=2.8e-44  Score=382.63  Aligned_cols=267  Identities=29%  Similarity=0.412  Sum_probs=218.0

Q ss_pred             ccccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHH
Q 009980            3 QETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDA   82 (521)
Q Consensus         3 ~~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (521)
                      ..+....++|++++.||.|+||+||+|+++.  ++..||+|++.......                          ....
T Consensus         6 ~~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~--tg~~vAlKvIk~~~l~e--------------------------~~~~   57 (1021)
T PTZ00266          6 DDGESRLNEYEVIKKIGNGRFGEVFLVKHKR--TQEFFCWKAISYRGLKE--------------------------REKS   57 (1021)
T ss_pred             cCCccccCCEEEEEEEecCCCeEEEEEEECC--CCeEEEEEEEeccccCH--------------------------HHHH
Confidence            4566778899999999999999999999988  78899999986533211                          1234


Q ss_pred             HHHHHHHHHHHHhhccCCCCCccceeEEEEe--CCeEEEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHH
Q 009980           83 LLTNEILVMRKIVENVSPHPNVIDLYDVYED--QNGVHLILELCSGGELFDRIVA----QERYMEVGAAAVIRQIAEGLA  156 (521)
Q Consensus        83 ~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~--~~~~~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qil~al~  156 (521)
                      .+..|+.++++|     .||||++++++|.+  ...+|||||||.+|+|.++|..    .+.+++..++.|+.||+.||.
T Consensus        58 ~~~~EI~IL~~L-----~HPNIVrl~d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALa  132 (1021)
T PTZ00266         58 QLVIEVNVMREL-----KHKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALA  132 (1021)
T ss_pred             HHHHHHHHHHHc-----CCCCcCeEEEEEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHH
Confidence            578899999999     99999999999854  4579999999999999998865    357999999999999999999


Q ss_pred             HHHHC-------CCeeccCCCCcEEEeeC--------------CCCCCEEEeecCCCccCCCCCCcccccCCcccccccc
Q 009980          157 ALHQA-------NIVHRDLKPENCLFLND--------------REDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEA  215 (521)
Q Consensus       157 ~lH~~-------~i~H~dlkp~Nil~~~~--------------~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~  215 (521)
                      |||+.       +|+||||||+|||+..+              +....+||+|||++.............||+.|+|||+
T Consensus       133 YLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEv  212 (1021)
T PTZ00266        133 YCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPEL  212 (1021)
T ss_pred             HHHhcccccccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCccccccccccccccCCCccccCHHH
Confidence            99984       49999999999999532              1234599999999986654444445679999999999


Q ss_pred             ccc--CCCCchhhhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCH
Q 009980          216 LLQ--DRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSA  293 (521)
Q Consensus       216 ~~~--~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~  293 (521)
                      +.+  ..++.++||||||||+|+|++|.+||..................++   ....++++.+||..||..+|.+|||+
T Consensus       213 L~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~~p~lp---i~~~S~eL~dLI~~~L~~dPeeRPSa  289 (1021)
T PTZ00266        213 LLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRGPDLP---IKGKSKELNILIKNLLNLSAKERPSA  289 (1021)
T ss_pred             HhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcCCCCC---cCCCCHHHHHHHHHHhcCChhHCcCH
Confidence            864  4588999999999999999999999977655443333333222222   24578999999999999999999999


Q ss_pred             HHHHcCCcccCC
Q 009980          294 QELLNHPWVIGD  305 (521)
Q Consensus       294 ~~~l~h~~~~~~  305 (521)
                      .++|.|||+...
T Consensus       290 ~QlL~h~~ik~i  301 (1021)
T PTZ00266        290 LQCLGYQIIKNV  301 (1021)
T ss_pred             HHHhccHHHhhc
Confidence            999999999743

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=100.00  E-value=1.8e-44  Score=362.77  Aligned_cols=258  Identities=29%  Similarity=0.398  Sum_probs=211.9

Q ss_pred             ceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHH
Q 009980           11 EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILV   90 (521)
Q Consensus        11 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   90 (521)
                      +|++.+.||+|+||.||+|.+..  +++.||||.+......                          ......+.+|+.+
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~--~~~~vaiK~~~~~~~~--------------------------~~~~~~~~~E~~~   52 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPR--DGKRVALKKMPNVFQN--------------------------LVSCKRVFRELKM   52 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECC--CCCEEEEEeccccccc--------------------------hHHHHHHHHHHHH
Confidence            57899999999999999999987  7889999998542110                          0123457789999


Q ss_pred             HHHHhhccCCCCCccceeEEEEeCC-----eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           91 MRKIVENVSPHPNVIDLYDVYEDQN-----GVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        91 l~~l~~~~~~hpniv~~~~~~~~~~-----~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      ++.+     +||||+++++++...+     ..|+||||+. ++|.+.+.....+++..+..++.||+.||.|||++||+|
T Consensus        53 l~~l-----~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH  126 (372)
T cd07853          53 LCFF-----KHDNVLSALDILQPPHIDPFEEIYVVTELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILH  126 (372)
T ss_pred             HHhC-----CCCCcCCHhheecCCCccccceEEEEeeccc-cCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeC
Confidence            9998     9999999999998876     8999999996 588888888888999999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC--CcccccCCcccccccccccC-CCCchhhhHHHHHHHHHHHhCCC
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD--PVVGLFGSIDYVSPEALLQD-RITSKSDMWSLGVILYILLSGYP  242 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~~ll~g~~  242 (521)
                      |||||+|||+   +.++.+||+|||+++......  ......+|+.|+|||.+.+. .++.++||||+||++|+|++|++
T Consensus       127 ~dlkp~Nili---~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~  203 (372)
T cd07853         127 RDIKPGNLLV---NSNCVLKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRI  203 (372)
T ss_pred             CCCChHHEEE---CCCCCEEeccccceeecccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCC
Confidence            9999999999   778899999999997643221  22334689999999998764 47899999999999999999999


Q ss_pred             CCCCCCcHHHHHHHHcC-----------------------CCCCch-----hhhhccCHHHHHHHHHhccCCCCCCCCHH
Q 009980          243 PFIAQSNRQKQQMIMAG-----------------------EFSFYE-----QTWKNISSSAKQLISSLLTVDPNRRPSAQ  294 (521)
Q Consensus       243 pf~~~~~~~~~~~i~~~-----------------------~~~~~~-----~~~~~~s~~~~~li~~~l~~dp~~R~t~~  294 (521)
                      ||.+.+.......+...                       ....+.     ......++++.+||.+||..||.+|||+.
T Consensus       204 pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~  283 (372)
T cd07853         204 LFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAA  283 (372)
T ss_pred             CCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHH
Confidence            99887766555444321                       111110     11234688999999999999999999999


Q ss_pred             HHHcCCcccCC
Q 009980          295 ELLNHPWVIGD  305 (521)
Q Consensus       295 ~~l~h~~~~~~  305 (521)
                      ++|+||||.+.
T Consensus       284 e~l~hp~~~~~  294 (372)
T cd07853         284 DALAHPYLDEG  294 (372)
T ss_pred             HHhcCHhhCCC
Confidence            99999999764

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.8e-46  Score=385.44  Aligned_cols=264  Identities=29%  Similarity=0.435  Sum_probs=231.8

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      +.-.++|+|+++||+|+||.|.+++++.  +++.||+|+++|-....                         ....+.|.
T Consensus        71 rl~~~DfeilKvIGrGaFGEV~lVr~k~--t~~VYAMK~lnK~eMlK-------------------------r~~tA~F~  123 (1317)
T KOG0612|consen   71 RLKAEDFEILKVIGRGAFGEVALVRHKS--TEKVYAMKILNKWEMLK-------------------------RAETACFR  123 (1317)
T ss_pred             hCCHHhhHHHHHhcccccceeEEEEeec--cccchhHHHhhHHHHhh-------------------------chhHHHHH
Confidence            3446799999999999999999999998  88999999998733221                         12345677


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      .|-.+|.--     +.+-|+.++..|+++.++|+||||++||+|..++.+.+++||.-++.++..|+.||.-+|+.|+||
T Consensus       124 EERDimv~~-----ns~Wiv~LhyAFQD~~~LYlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVH  198 (1317)
T KOG0612|consen  124 EERDIMVFG-----NSEWIVQLHYAFQDERYLYLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVH  198 (1317)
T ss_pred             HHhHHHHcC-----CcHHHHHHHHHhcCccceEEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhcccee
Confidence            888888765     899999999999999999999999999999999999889999999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC--CcccccCCcccccccccc----c-CCCCchhhhHHHHHHHHHHH
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD--PVVGLFGSIDYVSPEALL----Q-DRITSKSDMWSLGVILYILL  238 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~----~-~~~~~~~DiwslG~il~~ll  238 (521)
                      |||||+|||+   +..|.+||+|||.|-......  .....+|||.|+|||++.    + +.|++.||+||+||++|||+
T Consensus       199 RDiKPDNvLl---d~~GHikLADFGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMl  275 (1317)
T KOG0612|consen  199 RDIKPDNVLL---DKSGHIKLADFGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEML  275 (1317)
T ss_pred             ccCCcceeEe---cccCcEeeccchhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHH
Confidence            9999999999   999999999999987655333  234568999999999986    2 56899999999999999999


Q ss_pred             hCCCCCCCCCcHHHHHHHHcC--CCCCchhhhhccCHHHHHHHHHhccCCCCCCCC---HHHHHcCCcccCCCC
Q 009980          239 SGYPPFIAQSNRQKQQMIMAG--EFSFYEQTWKNISSSAKQLISSLLTVDPNRRPS---AQELLNHPWVIGDSA  307 (521)
Q Consensus       239 ~g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t---~~~~l~h~~~~~~~~  307 (521)
                      .|..||...+.-+.+.+|+..  .+.||..  ..+|.++++||.++++ +|+.|..   ++++.+||||.+..+
T Consensus       276 yG~TPFYadslveTY~KIm~hk~~l~FP~~--~~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpFF~g~~W  346 (1317)
T KOG0612|consen  276 YGETPFYADSLVETYGKIMNHKESLSFPDE--TDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPFFEGIDW  346 (1317)
T ss_pred             cCCCcchHHHHHHHHHHHhchhhhcCCCcc--cccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCccccCCCh
Confidence            999999999999999999987  6677633  3499999999999995 6889988   999999999997654

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.8e-44  Score=341.82  Aligned_cols=258  Identities=25%  Similarity=0.373  Sum_probs=217.8

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      +.|++.+.||+|++|.||.|.+..  +++.||+|.+........                       .......+.+|+.
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~--~~~~~~lk~~~~~~~~~~-----------------------~~~~~~~~~~e~~   56 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVD--TGRELAVKQVPFDPDSPE-----------------------TKKEVNALECEIQ   56 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcC--CCcEEEEEEEeecccchh-----------------------hHHHHHHHHHHHH
Confidence            579999999999999999999987  788999999865322110                       0112245788999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCC
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLK  169 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlk  169 (521)
                      +++++     +||||+++++++.++...|+||||++|++|.+.+...+.+++..+..++.|++.||.|||+.|++||||+
T Consensus        57 ~l~~l-----~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~  131 (263)
T cd06625          57 LLKNL-----QHERIVQYYGCLRDDETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIK  131 (263)
T ss_pred             HHHhC-----CCCCeeeeEEEEccCCeEEEEEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence            99998     9999999999999999999999999999999999888889999999999999999999999999999999


Q ss_pred             CCcEEEeeCCCCCCEEEeecCCCccCCCCCCc----ccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCC
Q 009980          170 PENCLFLNDREDSPLKIMDFGLSSVEGYTDPV----VGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFI  245 (521)
Q Consensus       170 p~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~  245 (521)
                      |+||++   +.++.++|+|||+++........    ....|++.|+|||.+.+..++.++||||+|+++|+|++|++||.
T Consensus       132 p~nilv---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~  208 (263)
T cd06625         132 GANILR---DSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWA  208 (263)
T ss_pred             HHHEEE---cCCCCEEEeecccceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCcc
Confidence            999999   67788999999998754322111    23457889999999998889999999999999999999999998


Q ss_pred             CCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcc
Q 009980          246 AQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV  302 (521)
Q Consensus       246 ~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~  302 (521)
                      ..+.......+.......  .....++..+.++|.+||..+|.+|||+.++++||||
T Consensus       209 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~  263 (263)
T cd06625         209 EFEAMAAIFKIATQPTNP--QLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV  263 (263)
T ss_pred             ccchHHHHHHHhccCCCC--CCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence            776655555444433222  2235689999999999999999999999999999997

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1.3e-44  Score=360.02  Aligned_cols=263  Identities=27%  Similarity=0.432  Sum_probs=212.3

Q ss_pred             cccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHH
Q 009980            4 ETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDAL   83 (521)
Q Consensus         4 ~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (521)
                      ....+.++|++.+.||.|+||.||+|.+..  +++.||||.+.+....                          ......
T Consensus         9 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~--~~~~vavK~~~~~~~~--------------------------~~~~~~   60 (343)
T cd07878           9 TVWEVPERYQNLTPVGSGAYGSVCSAYDTR--LRQKVAVKKLSRPFQS--------------------------LIHARR   60 (343)
T ss_pred             HHhhhhhhhhhheecccCCCeEEEEEEECC--CCCEEEEEEeCchhhh--------------------------hHHHHH
Confidence            344577899999999999999999999987  7889999998642211                          012234


Q ss_pred             HHHHHHHHHHHhhccCCCCCccceeEEEEeC------CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 009980           84 LTNEILVMRKIVENVSPHPNVIDLYDVYEDQ------NGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAA  157 (521)
Q Consensus        84 ~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~------~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~  157 (521)
                      +.+|+.+++++     +||||+++++++...      ..+|++|+++ |++|.+++. ...+++..+..++.||+.||.|
T Consensus        61 ~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~  133 (343)
T cd07878          61 TYRELRLLKHM-----KHENVIGLLDVFTPATSIENFNEVYLVTNLM-GADLNNIVK-CQKLSDEHVQFLIYQLLRGLKY  133 (343)
T ss_pred             HHHHHHHHHhc-----CCCchhhhhhhhcccccccccCcEEEEeecC-CCCHHHHHh-cCCCCHHHHHHHHHHHHHHHHH
Confidence            67899999998     999999999988543      4579999998 778877664 4679999999999999999999


Q ss_pred             HHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCccccccccccc-CCCCchhhhHHHHHHHHH
Q 009980          158 LHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQ-DRITSKSDMWSLGVILYI  236 (521)
Q Consensus       158 lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~  236 (521)
                      ||++||+||||||+||++   +.++.+||+|||+++....  ......||+.|+|||++.+ ..++.++||||+||++|+
T Consensus       134 LH~~~ivHrdikp~Nil~---~~~~~~kl~Dfg~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~e  208 (343)
T cd07878         134 IHSAGIIHRDLKPSNVAV---NEDCELRILDFGLARQADD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE  208 (343)
T ss_pred             HHHCCeecccCChhhEEE---CCCCCEEEcCCccceecCC--CcCCccccccccCchHhcCCccCCchhhhHhHHHHHHH
Confidence            999999999999999999   7788899999999986543  2344578999999999876 468899999999999999


Q ss_pred             HHhCCCCCCCCCcHHHHHHHHcCCCCC-----------------------c----hhhhhccCHHHHHHHHHhccCCCCC
Q 009980          237 LLSGYPPFIAQSNRQKQQMIMAGEFSF-----------------------Y----EQTWKNISSSAKQLISSLLTVDPNR  289 (521)
Q Consensus       237 ll~g~~pf~~~~~~~~~~~i~~~~~~~-----------------------~----~~~~~~~s~~~~~li~~~l~~dp~~  289 (521)
                      |++|++||.+.+..+....+.......                       +    ...+...++.+.+||.+||..||.+
T Consensus       209 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~  288 (343)
T cd07878         209 LLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDK  288 (343)
T ss_pred             HHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhh
Confidence            999999998766554444332211110                       0    0112346778899999999999999


Q ss_pred             CCCHHHHHcCCcccCCC
Q 009980          290 RPSAQELLNHPWVIGDS  306 (521)
Q Consensus       290 R~t~~~~l~h~~~~~~~  306 (521)
                      |||+.++|+||||....
T Consensus       289 R~s~~ell~hp~~~~~~  305 (343)
T cd07878         289 RISASEALAHPYFSQYH  305 (343)
T ss_pred             CCCHHHHhcCcchhccC
Confidence            99999999999998643

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=100.00  E-value=4.3e-44  Score=346.81  Aligned_cols=261  Identities=28%  Similarity=0.448  Sum_probs=217.3

Q ss_pred             ceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHH
Q 009980           11 EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILV   90 (521)
Q Consensus        11 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   90 (521)
                      .|++.+.||.|+||+||+|.+..  +++.||+|.+.+.....                         ......+.+|+.+
T Consensus         1 ~~~~~~~lg~G~~g~vy~~~~~~--~~~~~aiK~~~~~~~~~-------------------------~~~~~~~~~E~~i   53 (285)
T cd05632           1 TFRQYRVLGKGGFGEVCACQVRA--TGKMYACKRLEKKRIKK-------------------------RKGESMALNEKQI   53 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEECC--CCcEEEEEEeehhhhhh-------------------------hhHHHHHHHHHHH
Confidence            47888999999999999999987  78899999986532211                         0112346789999


Q ss_pred             HHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 009980           91 MRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ--ERYMEVGAAAVIRQIAEGLAALHQANIVHRDL  168 (521)
Q Consensus        91 l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~al~~lH~~~i~H~dl  168 (521)
                      ++++     +||||+++++.+..++..|+||||+.|++|.+++...  ..+++..+..++.|++.||.|||++||+||||
T Consensus        54 l~~l-----~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~di  128 (285)
T cd05632          54 LEKV-----NSQFVVNLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDL  128 (285)
T ss_pred             HHHc-----CCcCceeEEEEEecCCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCC
Confidence            9998     9999999999999999999999999999998887643  36999999999999999999999999999999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCC
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQS  248 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~  248 (521)
                      ||+||++   +.++.++|+|||++.............|++.|+|||.+.+..++.++|+||+||++|+|++|..||.+..
T Consensus       129 kp~Nili---~~~~~~kl~Dfg~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~  205 (285)
T cd05632         129 KPENILL---DDYGHIRISDLGLAVKIPEGESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRK  205 (285)
T ss_pred             CHHHEEE---CCCCCEEEecCCcceecCCCCcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCC
Confidence            9999999   6778899999999976543333345579999999999988889999999999999999999999998776


Q ss_pred             cHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCC-----HHHHHcCCcccCCC
Q 009980          249 NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPS-----AQELLNHPWVIGDS  306 (521)
Q Consensus       249 ~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t-----~~~~l~h~~~~~~~  306 (521)
                      .......+..............++..+.+|+.+||..||.+|||     +.+++.||||....
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~  268 (285)
T cd05632         206 EKVKREEVDRRVLETEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNMN  268 (285)
T ss_pred             HHHHHHHHHHhhhccccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcCC
Confidence            55443333332222222233568899999999999999999999     89999999997643

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=100.00  E-value=9.1e-44  Score=345.53  Aligned_cols=254  Identities=33%  Similarity=0.569  Sum_probs=223.1

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ++|++.+.||+|+||.||+|.+..  +++.||+|++.+.....                         ......+.+|+.
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~--~~~~~aiK~~~~~~~~~-------------------------~~~~~~~~~e~~   53 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKG--SGKYYALKILSKAKIVK-------------------------LKQVEHVLNEKR   53 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcC--CCCEEEEEEEEHHHhhh-------------------------hhHHHHHHHHHH
Confidence            479999999999999999999987  78899999987532211                         012345788999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCC
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLK  169 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlk  169 (521)
                      +++++     +||||+++++++.+.+.+|+||||++|++|.+++...+.+++..+..++.||+.||.|||++|++|+||+
T Consensus        54 ~l~~l-----~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~  128 (290)
T cd05580          54 ILQSI-----RHPFLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLK  128 (290)
T ss_pred             HHHhC-----CCCCccceeeEEEcCCeEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCC
Confidence            99998     8999999999999999999999999999999999988899999999999999999999999999999999


Q ss_pred             CCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCc
Q 009980          170 PENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSN  249 (521)
Q Consensus       170 p~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~  249 (521)
                      |.||++   +.++.+||+|||++......  .....|++.|+|||.+.+..++.++|+||||+++|+|++|..||...+.
T Consensus       129 p~nili---~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~  203 (290)
T cd05580         129 PENLLL---DSDGYIKITDFGFAKRVKGR--TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNP  203 (290)
T ss_pred             HHHEEE---CCCCCEEEeeCCCccccCCC--CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH
Confidence            999999   77788999999999865433  3344689999999999888889999999999999999999999988877


Q ss_pred             HHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCC-----CHHHHHcCCcccC
Q 009980          250 RQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRP-----SAQELLNHPWVIG  304 (521)
Q Consensus       250 ~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~-----t~~~~l~h~~~~~  304 (521)
                      ......+..+...++    ..+++.++++|.+||..||.+|+     +++++++||||..
T Consensus       204 ~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~  259 (290)
T cd05580         204 IQIYEKILEGKVRFP----SFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAG  259 (290)
T ss_pred             HHHHHHHhcCCccCC----ccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCccccc
Confidence            777777776655544    34689999999999999999999     9999999999965

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>PHA03207 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=7.2e-44  Score=360.33  Aligned_cols=258  Identities=24%  Similarity=0.351  Sum_probs=210.7

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      .+..+|++++.||.|+||.||+|.......+..||+|.+...                                 ....+
T Consensus        89 ~~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~---------------------------------~~~~~  135 (392)
T PHA03207         89 VVRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG---------------------------------KTPGR  135 (392)
T ss_pred             hccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc---------------------------------ccHHH
Confidence            345679999999999999999998765456788999987431                                 12467


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHR  166 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~  166 (521)
                      |+.+++++     +||||+++++++.....+|+|||++. ++|.+++...+.+++..+..++.||+.||.|||++||+||
T Consensus       136 E~~il~~l-----~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHr  209 (392)
T PHA03207        136 EIDILKTI-----SHRAIINLIHAYRWKSTVCMVMPKYK-CDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHR  209 (392)
T ss_pred             HHHHHHhc-----CCCCccceeeeEeeCCEEEEEehhcC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccc
Confidence            99999998     99999999999999999999999995 5899999777889999999999999999999999999999


Q ss_pred             cCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC---cccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCC
Q 009980          167 DLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPP  243 (521)
Q Consensus       167 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~p  243 (521)
                      ||||+|||+   +..+.++|+|||++........   .....||+.|+|||++.+..|+.++||||+||++|+|++|+.|
T Consensus       210 Dlkp~Nill---~~~~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~p  286 (392)
T PHA03207        210 DVKTENIFL---DEPENAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVT  286 (392)
T ss_pred             CCCHHHEEE---cCCCCEEEccCccccccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCC
Confidence            999999999   7788999999999975443221   2345699999999999988999999999999999999999999


Q ss_pred             CCCCCcH---HHHHHHHcC----CCCCch-----------------------h---hhhccCHHHHHHHHHhccCCCCCC
Q 009980          244 FIAQSNR---QKQQMIMAG----EFSFYE-----------------------Q---TWKNISSSAKQLISSLLTVDPNRR  290 (521)
Q Consensus       244 f~~~~~~---~~~~~i~~~----~~~~~~-----------------------~---~~~~~s~~~~~li~~~l~~dp~~R  290 (521)
                      |.+....   ..+..+...    ...++.                       +   ....++.++++||.+||..||++|
T Consensus       287 f~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R  366 (392)
T PHA03207        287 LFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFR  366 (392)
T ss_pred             CCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhC
Confidence            9765432   111111110    000000                       0   002356789999999999999999


Q ss_pred             CCHHHHHcCCcccCCC
Q 009980          291 PSAQELLNHPWVIGDS  306 (521)
Q Consensus       291 ~t~~~~l~h~~~~~~~  306 (521)
                      ||+.++|.||||....
T Consensus       367 psa~e~l~~p~f~~~~  382 (392)
T PHA03207        367 PSAQDILSLPLFTKEP  382 (392)
T ss_pred             CCHHHHhhCchhhccc
Confidence            9999999999997644

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=100.00  E-value=1.4e-43  Score=346.21  Aligned_cols=260  Identities=25%  Similarity=0.409  Sum_probs=212.4

Q ss_pred             ccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEI   88 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   88 (521)
                      .++|++.+.||.|+||.||+|.++.  +++.||+|.+.......                           ....+.+|+
T Consensus         5 ~~~y~~~~~lg~g~~g~vy~~~~~~--~~~~vaiK~~~~~~~~~---------------------------~~~~~~~E~   55 (301)
T cd07873           5 LETYIKLDKLGEGTYATVYKGRSKL--TDNLVALKEIRLEHEEG---------------------------APCTAIREV   55 (301)
T ss_pred             ccceEEeeEeccCcCEEEEEEEEcC--CCcEEEEEEEecccccC---------------------------chhHHHHHH
Confidence            4689999999999999999999987  78899999986432211                           123467899


Q ss_pred             HHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecc
Q 009980           89 LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQANIVHRD  167 (521)
Q Consensus        89 ~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~~~i~H~d  167 (521)
                      .+++++     +||||+++++++..++..|+||||+.+ +|.+.+... ..+++..+..++.||+.||.|||++||+|+|
T Consensus        56 ~~l~~l-----~h~nI~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~d  129 (301)
T cd07873          56 SLLKDL-----KHANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRD  129 (301)
T ss_pred             HHHHhc-----CCCCcceEEEEEecCCeEEEEEecccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCC
Confidence            999998     999999999999999999999999975 888887653 5689999999999999999999999999999


Q ss_pred             CCCCcEEEeeCCCCCCEEEeecCCCccCCCCC-CcccccCCcccccccccccC-CCCchhhhHHHHHHHHHHHhCCCCCC
Q 009980          168 LKPENCLFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALLQD-RITSKSDMWSLGVILYILLSGYPPFI  245 (521)
Q Consensus       168 lkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~~ll~g~~pf~  245 (521)
                      |||+||++   +.++.++|+|||++....... ......+++.|+|||++.+. .++.++|||||||++|+|++|++||.
T Consensus       130 lkp~Nil~---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~  206 (301)
T cd07873         130 LKPQNLLI---NERGELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFP  206 (301)
T ss_pred             CCHHHEEE---CCCCcEEECcCcchhccCCCCCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCC
Confidence            99999999   777889999999987543222 22334578999999988653 57889999999999999999999998


Q ss_pred             CCCcHHHHHHHHcCCCCCc--------------------------hhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          246 AQSNRQKQQMIMAGEFSFY--------------------------EQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       246 ~~~~~~~~~~i~~~~~~~~--------------------------~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      +.+..+....+........                          ......+++.+++||.+||..||.+|||+.++|+|
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h  286 (301)
T cd07873         207 GSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKH  286 (301)
T ss_pred             CCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence            8776555443332111100                          01123578899999999999999999999999999


Q ss_pred             CcccCCC
Q 009980          300 PWVIGDS  306 (521)
Q Consensus       300 ~~~~~~~  306 (521)
                      |||....
T Consensus       287 ~~f~~~~  293 (301)
T cd07873         287 PYFHCLG  293 (301)
T ss_pred             ccccccc
Confidence            9997543

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=100.00  E-value=1.4e-46  Score=336.79  Aligned_cols=257  Identities=24%  Similarity=0.394  Sum_probs=220.0

Q ss_pred             ccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEI   88 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   88 (521)
                      .+-|.++++||+|+||.||+|+|+.  +|+.+|||.++..                              ..-+.+..||
T Consensus        32 EEVFDi~~KLGEGSYGSV~KAIH~E--sG~v~AIK~VPV~------------------------------sDLQEIIKEI   79 (502)
T KOG0574|consen   32 EEVFDIVGKLGEGSYGSVHKAIHRE--SGHVLAIKKVPVD------------------------------TDLQEIIKEI   79 (502)
T ss_pred             HHHHHHHHHhcCCcchHHHHHHHhc--cCcEEEEEecCcc------------------------------chHHHHHHHH
Confidence            4568889999999999999999999  8999999998531                              2345688999


Q ss_pred             HHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecc
Q 009980           89 LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIV-AQERYMEVGAAAVIRQIAEGLAALHQANIVHRD  167 (521)
Q Consensus        89 ~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~-~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~d  167 (521)
                      .+|+++     +.|++|++|+.|-....+|||||||..|++.+.+. ++.+++|.++..+++.-+.||.|||...-+|||
T Consensus        80 SIMQQC-----~S~yVVKYYGSYFK~sDLWIVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRD  154 (502)
T KOG0574|consen   80 SIMQQC-----KSKYVVKYYGSYFKHSDLWIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRD  154 (502)
T ss_pred             HHHHHc-----CCchhhhhhhhhccCCceEeehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhh
Confidence            999998     99999999999999999999999999999999887 457899999999999999999999999999999


Q ss_pred             CCCCcEEEeeCCCCCCEEEeecCCCccCCCCC-CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCC
Q 009980          168 LKPENCLFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIA  246 (521)
Q Consensus       168 lkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~  246 (521)
                      ||+.|||+   +..+..||+|||.|......- ...+..|||.|||||++..-.|+.++||||||++..+|..|++||.+
T Consensus       155 IKAGNILL---NT~G~AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsD  231 (502)
T KOG0574|consen  155 IKAGNILL---NTDGIAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSD  231 (502)
T ss_pred             cccccEEE---cccchhhhhhccccchhhhhHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccc
Confidence            99999999   788999999999997654332 23456899999999999988999999999999999999999999977


Q ss_pred             CCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCC
Q 009980          247 QSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDS  306 (521)
Q Consensus       247 ~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~  306 (521)
                      ..+....-.|.... ++.-..+...|.++-+||++||.++|++|-|+.++++|||+++..
T Consensus       232 IHPMRAIFMIPT~P-PPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~FiknA~  290 (502)
T KOG0574|consen  232 IHPMRAIFMIPTKP-PPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTFIKNAP  290 (502)
T ss_pred             ccccceeEeccCCC-CCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcCCC
Confidence            65543333332222 222222345789999999999999999999999999999998643

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=8.4e-45  Score=351.51  Aligned_cols=258  Identities=27%  Similarity=0.446  Sum_probs=222.2

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ..|.=++.||+|+||.||-|++..  +...||||.+..++..+                         ......+..|+.
T Consensus        26 klf~dLrEIGHGSFGAVYfArd~~--n~evVAIKKMsySGKQs-------------------------~EKWqDIlKEVr   78 (948)
T KOG0577|consen   26 KLFSDLREIGHGSFGAVYFARDVR--NSEVVAIKKMSYSGKQS-------------------------NEKWQDILKEVR   78 (948)
T ss_pred             HHHHHHHHhcCCccceeEEeeccC--ccceeeeeecccccccc-------------------------HHHHHHHHHHHH
Confidence            345567889999999999999998  88899999997654432                         223455889999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIV-AQERYMEVGAAAVIRQIAEGLAALHQANIVHRDL  168 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~-~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dl  168 (521)
                      .|+++     .|||++.+-++|-.+...|||||||-| +-.|.+. ..+++-|.+++.|+.+.+.||+|||+.+.+||||
T Consensus        79 FL~~l-----~HPntieYkgCyLre~TaWLVMEYClG-SAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDi  152 (948)
T KOG0577|consen   79 FLRQL-----RHPNTIEYKGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDI  152 (948)
T ss_pred             HHHhc-----cCCCcccccceeeccchHHHHHHHHhc-cHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhc
Confidence            99999     999999999999999999999999976 7777765 3467999999999999999999999999999999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccc---cCCCCchhhhHHHHHHHHHHHhCCCCCC
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALL---QDRITSKSDMWSLGVILYILLSGYPPFI  245 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~~ll~g~~pf~  245 (521)
                      |+.|||+   ...+.|||+|||.|....   +..+++|||+|||||++.   .+.|+-++||||||++..+|...+||+.
T Consensus       153 KAGNILL---se~g~VKLaDFGSAsi~~---PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlF  226 (948)
T KOG0577|consen  153 KAGNILL---SEPGLVKLADFGSASIMA---PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLF  226 (948)
T ss_pred             cccceEe---cCCCeeeeccccchhhcC---chhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCcc
Confidence            9999999   788999999999998765   345678999999999987   4689999999999999999999999999


Q ss_pred             CCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCCCc
Q 009980          246 AQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAK  308 (521)
Q Consensus       246 ~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~~~  308 (521)
                      ..+...-+..|..+..+....  ...|..+++||..||.+-|.+|||.+++|.|+|+.....+
T Consensus       227 nMNAMSALYHIAQNesPtLqs--~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R~Rp~  287 (948)
T KOG0577|consen  227 NMNAMSALYHIAQNESPTLQS--NEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLRERPP  287 (948)
T ss_pred             CchHHHHHHHHHhcCCCCCCC--chhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhccCCCc
Confidence            988887777777665433221  3458899999999999999999999999999999865443

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=100.00  E-value=1.8e-43  Score=339.27  Aligned_cols=257  Identities=24%  Similarity=0.425  Sum_probs=213.7

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      ...++|++.+.||+|+||.||+|++..  +++.||+|+++....                            .....+.+
T Consensus         6 ~~~~~~~~~~~lg~g~~~~v~~~~~~~--~~~~~~ik~~~~~~~----------------------------~~~~~~~~   55 (267)
T cd06645           6 NPQEDFELIQRIGSGTYGDVYKARNVN--TGELAAIKVIKLEPG----------------------------EDFAVVQQ   55 (267)
T ss_pred             CcHHHHHHHHHhCCCCCeEEEEEEEcC--CCcEEEEEEEecCch----------------------------hHHHHHHH
Confidence            345689999999999999999999987  788999999864321                            11234678


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHR  166 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~  166 (521)
                      |+.+++.+     +||||+++++++...+.+|+||||+++++|.+++...+.+++.++..++.|++.||.|||++|++|+
T Consensus        56 e~~~~~~l-----~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~  130 (267)
T cd06645          56 EIIMMKDC-----KHSNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHR  130 (267)
T ss_pred             HHHHHHhC-----CCCCeeeEEEEEEeCCEEEEEEeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecC
Confidence            99999988     9999999999999999999999999999999999888899999999999999999999999999999


Q ss_pred             cCCCCcEEEeeCCCCCCEEEeecCCCccCCCC-CCcccccCCcccccccccc---cCCCCchhhhHHHHHHHHHHHhCCC
Q 009980          167 DLKPENCLFLNDREDSPLKIMDFGLSSVEGYT-DPVVGLFGSIDYVSPEALL---QDRITSKSDMWSLGVILYILLSGYP  242 (521)
Q Consensus       167 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~~ll~g~~  242 (521)
                      ||||+||++   +.++.++|+|||++...... .......|++.|+|||.+.   ...++.++|+||+||++|+|++|.+
T Consensus       131 dlkp~nili---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~  207 (267)
T cd06645         131 DIKGANILL---TDNGHVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQP  207 (267)
T ss_pred             CCCHHHEEE---CCCCCEEECcceeeeEccCcccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCC
Confidence            999999999   67788999999998654322 1223457899999999874   4568899999999999999999999


Q ss_pred             CCCCCCcHHHHHHHHcCCCCCch-hhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCc
Q 009980          243 PFIAQSNRQKQQMIMAGEFSFYE-QTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPW  301 (521)
Q Consensus       243 pf~~~~~~~~~~~i~~~~~~~~~-~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~  301 (521)
                      ||...................+. .....++..+.++|.+||..+|++|||++++++|||
T Consensus       208 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~  267 (267)
T cd06645         208 PMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF  267 (267)
T ss_pred             CcccccchhhHHhhhccCCCCCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence            99766554443333333332221 111247889999999999999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=100.00  E-value=4.7e-43  Score=339.86  Aligned_cols=257  Identities=27%  Similarity=0.455  Sum_probs=212.6

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ++|++.+.||+|++|.||+|+++.  +++.||+|.+.......                          .....+.+|+.
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~--~~~~~~iK~~~~~~~~~--------------------------~~~~~~~~e~~   52 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRE--TGQIVAIKKFVESEDDP--------------------------VIKKIALREIR   52 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECC--CCcEEEEEEEeecccCc--------------------------cccHHHHHHHH
Confidence            579999999999999999999987  78899999986532211                          11234678999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCC
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLK  169 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlk  169 (521)
                      +++++     .||||+++++++.....+|+||||+++++|..++.....+++..+..++.||+.||.|||+.|++|||||
T Consensus        53 ~l~~~-----~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~  127 (286)
T cd07847          53 MLKQL-----KHPNLVNLIEVFRRKRKLHLVFEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVK  127 (286)
T ss_pred             HHHhC-----CCCCEeeeeeEEeeCCEEEEEEeccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCC
Confidence            99998     9999999999999999999999999998888777776789999999999999999999999999999999


Q ss_pred             CCcEEEeeCCCCCCEEEeecCCCccCCCCC-CcccccCCccccccccccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 009980          170 PENCLFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALLQ-DRITSKSDMWSLGVILYILLSGYPPFIAQ  247 (521)
Q Consensus       170 p~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~  247 (521)
                      |+||++   +.++.++|+|||++....... ......++..|+|||.+.+ ..++.++|+||+|+++|+|++|.+||.+.
T Consensus       128 p~nil~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~  204 (286)
T cd07847         128 PENILI---TKQGQIKLCDFGFARILTGPGDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGK  204 (286)
T ss_pred             hhhEEE---cCCCcEEECccccceecCCCcccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCC
Confidence            999999   677889999999998654332 2233457889999999875 45789999999999999999999999877


Q ss_pred             CcHHHHHHHHcCCC-------------------CCc--------hhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCC
Q 009980          248 SNRQKQQMIMAGEF-------------------SFY--------EQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHP  300 (521)
Q Consensus       248 ~~~~~~~~i~~~~~-------------------~~~--------~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~  300 (521)
                      +..+....+.....                   ..+        ...+..++..+.+|+.+||..+|++|||+.+++.||
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~  284 (286)
T cd07847         205 SDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHP  284 (286)
T ss_pred             ChHHHHHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCC
Confidence            66544433322100                   000        112346789999999999999999999999999999


Q ss_pred             cc
Q 009980          301 WV  302 (521)
Q Consensus       301 ~~  302 (521)
                      ||
T Consensus       285 ~f  286 (286)
T cd07847         285 YF  286 (286)
T ss_pred             CC
Confidence            97

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=100.00  E-value=3.1e-43  Score=344.63  Aligned_cols=260  Identities=23%  Similarity=0.345  Sum_probs=213.8

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ++|++.+.||+|+||.||+|.+..  ++..||+|.+.....                           ......+.+|+.
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~~--~~~~~a~k~~~~~~~---------------------------~~~~~~~~~E~~   51 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHRP--SGLIMARKLIHLEIK---------------------------PAIRNQIIRELK   51 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEcC--CCeEEEEEEeccccC---------------------------HHHHHHHHHHHH
Confidence            479999999999999999999987  778899999854211                           012345778999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeccC
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ-ANIVHRDL  168 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~-~~i~H~dl  168 (521)
                      ++.++     +||||+++++++.+++.+|+||||++|++|.+++...+.+++..+..++.|++.||.|||+ .+++||||
T Consensus        52 ~l~~l-----~h~~iv~~~~~~~~~~~~~lv~ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl  126 (308)
T cd06615          52 VLHEC-----NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDV  126 (308)
T ss_pred             HHHhC-----CCCCCCeEEEEEeeCCEEEEEeeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCC
Confidence            99998     9999999999999999999999999999999999888889999999999999999999998 59999999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCC
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQS  248 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~  248 (521)
                      ||+||++   +.++.++|+|||++...... ......|++.|+|||.+.+..++.++|+||+||++|+|++|..||...+
T Consensus       127 ~p~nil~---~~~~~~~l~dfg~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~  202 (308)
T cd06615         127 KPSNILV---NSRGEIKLCDFGVSGQLIDS-MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPD  202 (308)
T ss_pred             ChHHEEE---ecCCcEEEccCCCccccccc-ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcc
Confidence            9999999   66788999999998754322 2234578999999999988889999999999999999999999997655


Q ss_pred             cHHHHHHHHcCCCCC----------------------------------chhhhhccCHHHHHHHHHhccCCCCCCCCHH
Q 009980          249 NRQKQQMIMAGEFSF----------------------------------YEQTWKNISSSAKQLISSLLTVDPNRRPSAQ  294 (521)
Q Consensus       249 ~~~~~~~i~~~~~~~----------------------------------~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~  294 (521)
                      .......+.......                                  +......++.++++|+.+||..+|++|||+.
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~  282 (308)
T cd06615         203 AKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLK  282 (308)
T ss_pred             hhhHHHhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHH
Confidence            433322221110000                                  0001123678899999999999999999999


Q ss_pred             HHHcCCcccCCCC
Q 009980          295 ELLNHPWVIGDSA  307 (521)
Q Consensus       295 ~~l~h~~~~~~~~  307 (521)
                      ++++||||.....
T Consensus       283 ~ll~~~~~~~~~~  295 (308)
T cd06615         283 ELTKHPFIKRAEL  295 (308)
T ss_pred             HHhcChhhhhccc
Confidence            9999999976433

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.5e-43  Score=337.23  Aligned_cols=257  Identities=27%  Similarity=0.444  Sum_probs=219.2

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ++|++.+.||.|++|.||+|++..  +++.||+|++......                           .....+.+|+.
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~--~~~~~~ik~~~~~~~~---------------------------~~~~~~~~e~~   51 (274)
T cd06609           1 ELFTLLECIGKGSFGEVYKAIDKR--TNQVVAIKVIDLEEAE---------------------------DEIEDIQQEIQ   51 (274)
T ss_pred             ChhhhhhhhcCCCCeEEEEEEECC--CCeEEEEEEeeccccc---------------------------hHHHHHHHHHH
Confidence            579999999999999999999987  7889999998643211                           12245778999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCC
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLK  169 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlk  169 (521)
                      +++++     +||||+++++++.++...|+|+||+.|++|.+++... ++++..+..++.|++.||.|||+++++|+||+
T Consensus        52 ~l~~l-----~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~  125 (274)
T cd06609          52 FLSQC-----RSPYITKYYGSFLKGSKLWIIMEYCGGGSCLDLLKPG-KLDETYIAFILREVLLGLEYLHEEGKIHRDIK  125 (274)
T ss_pred             HHHHc-----CCCCeeeeeEEEEECCeEEEEEEeeCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence            99998     8999999999999999999999999999999998765 78999999999999999999999999999999


Q ss_pred             CCcEEEeeCCCCCCEEEeecCCCccCCCC-CCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCC
Q 009980          170 PENCLFLNDREDSPLKIMDFGLSSVEGYT-DPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQS  248 (521)
Q Consensus       170 p~Nil~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~  248 (521)
                      |+||++   +.++.++|+|||+++..... .......|++.|+|||.+.+..++.++||||+|+++|+|++|.+||...+
T Consensus       126 p~ni~i---~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~  202 (274)
T cd06609         126 AANILL---SEEGDVKLADFGVSGQLTSTMSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLH  202 (274)
T ss_pred             HHHEEE---CCCCCEEEcccccceeecccccccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCc
Confidence            999999   77889999999999765433 22334568899999999998889999999999999999999999998777


Q ss_pred             cHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCC
Q 009980          249 NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDS  306 (521)
Q Consensus       249 ~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~  306 (521)
                      .......+.....+...  ...++..+.+++.+||..+|++|||++++++||||....
T Consensus       203 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~~~  258 (274)
T cd06609         203 PMRVLFLIPKNNPPSLE--GNKFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKKAK  258 (274)
T ss_pred             hHHHHHHhhhcCCCCCc--ccccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhcCCC
Confidence            66655555554332221  122789999999999999999999999999999997643

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=100.00  E-value=6.1e-43  Score=333.33  Aligned_cols=253  Identities=28%  Similarity=0.426  Sum_probs=219.0

Q ss_pred             ceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHH
Q 009980           11 EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILV   90 (521)
Q Consensus        11 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   90 (521)
                      +|++.+.||+|++|.||+|.++.  +++.||+|.+.......                          .....+.+|+.+
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~--~~~~~~~k~~~~~~~~~--------------------------~~~~~~~~e~~~   52 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKA--DKRVYAMKQIDLSKMNR--------------------------REREEAIDEARV   52 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcC--CCcEEEEEEeehhhCCH--------------------------HHHHHHHHHHHH
Confidence            58899999999999999999987  78899999986532211                          234557889999


Q ss_pred             HHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 009980           91 MRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ--ERYMEVGAAAVIRQIAEGLAALHQANIVHRDL  168 (521)
Q Consensus        91 l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~al~~lH~~~i~H~dl  168 (521)
                      ++++     +||||+++++++...+..|+||||++|++|.+++...  ..+++..+..++.|++.||.|||++|++|+||
T Consensus        53 l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl  127 (256)
T cd08529          53 LAKL-----DSSYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDI  127 (256)
T ss_pred             HHhc-----CCCCeehheeeeccCCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence            9998     9999999999999999999999999999999998764  57899999999999999999999999999999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCccCCCCCC-cccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSSVEGYTDP-VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQ  247 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~  247 (521)
                      +|+||++   +.++.++|+|||++........ .....|++.|+|||++.+..++.++|+||||+++|+|++|+.||...
T Consensus       128 ~~~nili---~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~  204 (256)
T cd08529         128 KSLNLFL---DAYDNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDAN  204 (256)
T ss_pred             CcceEEE---eCCCCEEEcccccceeccCccchhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCC
Confidence            9999999   6778899999999876543322 23346889999999999888999999999999999999999999888


Q ss_pred             CcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcc
Q 009980          248 SNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV  302 (521)
Q Consensus       248 ~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~  302 (521)
                      +.......+..+..+...   ..++..+.+++.+||+.+|++||++.+++.|||+
T Consensus       205 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~  256 (256)
T cd08529         205 NQGALILKIIRGVFPPVS---QMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNPSL  256 (256)
T ss_pred             CHHHHHHHHHcCCCCCCc---cccCHHHHHHHHHHccCCcccCcCHHHHhhCCCC
Confidence            877777777666544322   3578999999999999999999999999999996

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=100.00  E-value=5.3e-43  Score=339.31  Aligned_cols=255  Identities=27%  Similarity=0.417  Sum_probs=206.5

Q ss_pred             ceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHH
Q 009980           11 EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILV   90 (521)
Q Consensus        11 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   90 (521)
                      +|++.+.||+|++|.||+|.++.  ++..||||.+.......                          .....+.+|+.+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~--~~~~~~ik~~~~~~~~~--------------------------~~~~~~~~e~~~   52 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKK--TGQIVAMKKIRLESEEE--------------------------GVPSTAIREISL   52 (285)
T ss_pred             CceEeeEecccCceEEEEEEECC--CCcEEEEEEeccccccC--------------------------CchHHHHHHHHH
Confidence            58999999999999999999987  78899999986432111                          112447789999


Q ss_pred             HHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCCeecc
Q 009980           91 MRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ---ERYMEVGAAAVIRQIAEGLAALHQANIVHRD  167 (521)
Q Consensus        91 l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~---~~~~~~~~~~i~~qil~al~~lH~~~i~H~d  167 (521)
                      ++++     +||||+++++++.+++..|+||||+. ++|.+++...   ..+++..++.++.||+.||.|||++|++|||
T Consensus        53 l~~l-----~h~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~d  126 (285)
T cd07861          53 LKEL-----QHPNIVCLQDVLMQESRLYLIFEFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRD  126 (285)
T ss_pred             HHhc-----CCCCEeeeEEEEeeCCeEEEEEecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecC
Confidence            9998     89999999999999999999999997 4888877543   4689999999999999999999999999999


Q ss_pred             CCCCcEEEeeCCCCCCEEEeecCCCccCCCCC-CcccccCCcccccccccccC-CCCchhhhHHHHHHHHHHHhCCCCCC
Q 009980          168 LKPENCLFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALLQD-RITSKSDMWSLGVILYILLSGYPPFI  245 (521)
Q Consensus       168 lkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~~ll~g~~pf~  245 (521)
                      |||+||++   +.++.++|+|||++....... ......+++.|+|||.+.+. .++.++||||+||++|+|++|++||.
T Consensus       127 l~p~nil~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~  203 (285)
T cd07861         127 LKPQNLLI---DNKGVIKLADFGLARAFGIPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFH  203 (285)
T ss_pred             CCHHHEEE---cCCCcEEECcccceeecCCCcccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCC
Confidence            99999999   778889999999987543222 12234578999999988654 57889999999999999999999998


Q ss_pred             CCCcHHHHHHHHcCCC-------------------------CCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCC
Q 009980          246 AQSNRQKQQMIMAGEF-------------------------SFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHP  300 (521)
Q Consensus       246 ~~~~~~~~~~i~~~~~-------------------------~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~  300 (521)
                      +.+.......+.....                         ......+..+|++++++|.+||..||.+|||+.++++||
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~  283 (285)
T cd07861         204 GDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHP  283 (285)
T ss_pred             CCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCC
Confidence            7655433322211100                         001112345789999999999999999999999999999


Q ss_pred             cc
Q 009980          301 WV  302 (521)
Q Consensus       301 ~~  302 (521)
                      ||
T Consensus       284 ~~  285 (285)
T cd07861         284 YF  285 (285)
T ss_pred             CC
Confidence            97

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=100.00  E-value=3e-43  Score=337.71  Aligned_cols=257  Identities=23%  Similarity=0.400  Sum_probs=212.3

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      ...++|++.+.||+|+||.||+|+++.  +++.||+|++.....                            .....+.+
T Consensus         6 ~~~~~y~~~~~lg~g~~g~vy~~~~~~--~~~~~aik~~~~~~~----------------------------~~~~~~~~   55 (267)
T cd06646           6 NPQHDYELIQRVGSGTYGDVYKARNLH--TGELAAVKIIKLEPG----------------------------DDFSLIQQ   55 (267)
T ss_pred             CchhhcchhheeecCCCeEEEEEEECC--CCeEEEEEEEecCcc----------------------------chHHHHHH
Confidence            345789999999999999999999987  788999999864211                            11234778


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHR  166 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~  166 (521)
                      |+.+++++     +||||+++++++...+.+|+||||+.+++|.+++...+.+++..+..++.|++.||.|||+.||+||
T Consensus        56 e~~~l~~~-----~h~~ii~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~  130 (267)
T cd06646          56 EIFMVKEC-----KHCNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHR  130 (267)
T ss_pred             HHHHHHhc-----CCCCeeeeeEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccc
Confidence            99999998     9999999999999999999999999999999999888889999999999999999999999999999


Q ss_pred             cCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC-CcccccCCcccccccccc---cCCCCchhhhHHHHHHHHHHHhCCC
Q 009980          167 DLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALL---QDRITSKSDMWSLGVILYILLSGYP  242 (521)
Q Consensus       167 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~~ll~g~~  242 (521)
                      ||+|+||++   +.++.++|+|||++....... ......|++.|+|||.+.   ...++.++|+||+||++|+|++|.+
T Consensus       131 dl~p~nill---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~  207 (267)
T cd06646         131 DIKGANILL---TDNGDVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQP  207 (267)
T ss_pred             CCCHHHEEE---CCCCCEEECcCccceeecccccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCC
Confidence            999999999   677889999999997653222 223456889999999884   3457889999999999999999999


Q ss_pred             CCCCCCcHHHHHHHHcCCCCCch-hhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCc
Q 009980          243 PFIAQSNRQKQQMIMAGEFSFYE-QTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPW  301 (521)
Q Consensus       243 pf~~~~~~~~~~~i~~~~~~~~~-~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~  301 (521)
                      ||...........+....+..+. .....+|..+.+||.+||..+|++|||++++++|+|
T Consensus       208 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~  267 (267)
T cd06646         208 PMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF  267 (267)
T ss_pred             CccccchhhhheeeecCCCCCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence            99765544333333232222211 111347899999999999999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>PHA03209 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1.8e-43  Score=353.10  Aligned_cols=250  Identities=26%  Similarity=0.376  Sum_probs=200.4

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      .+|++.+.||+|+||.||+|+++.  +++.||+|+..+.                                  ....|+.
T Consensus        66 ~~y~~~~~lg~G~~g~Vy~~~~~~--~~~~valK~~~~~----------------------------------~~~~E~~  109 (357)
T PHA03209         66 LGYTVIKTLTPGSEGRVFVATKPG--QPDPVVLKIGQKG----------------------------------TTLIEAM  109 (357)
T ss_pred             cCcEEEEEecCCCCeEEEEEEECC--CCceEEEEeCCcc----------------------------------ccHHHHH
Confidence            469999999999999999999987  7789999985321                                  1346888


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQANIVHRDL  168 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dl  168 (521)
                      +++++     +||||+++++++......|+|||++.| +|.+++.. ...+++..+..|+.||+.||.|||++||+||||
T Consensus       110 ~l~~l-----~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDl  183 (357)
T PHA03209        110 LLQNV-----NHPSVIRMKDTLVSGAITCMVLPHYSS-DLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDV  183 (357)
T ss_pred             HHHhC-----CCCCCcChhheEEeCCeeEEEEEccCC-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence            99988     999999999999999999999999964 88887765 467999999999999999999999999999999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCC-CCCC
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPP-FIAQ  247 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~p-f~~~  247 (521)
                      ||+|||+   +..+.+||+|||+++............||+.|+|||++.+..++.++||||+||++|+|+++..| |...
T Consensus       184 kp~Nill---~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~  260 (357)
T PHA03209        184 KTENIFI---NDVDQVCIGDLGAAQFPVVAPAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDP  260 (357)
T ss_pred             CHHHEEE---CCCCCEEEecCccccccccCcccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCC
Confidence            9999999   77888999999999754433333456799999999999998999999999999999999985444 4332


Q ss_pred             CcH---------HHHHHHHcCC----CCCc--------------------------hhhhhccCHHHHHHHHHhccCCCC
Q 009980          248 SNR---------QKQQMIMAGE----FSFY--------------------------EQTWKNISSSAKQLISSLLTVDPN  288 (521)
Q Consensus       248 ~~~---------~~~~~i~~~~----~~~~--------------------------~~~~~~~s~~~~~li~~~l~~dp~  288 (521)
                      ...         .....+....    ..++                          .....+++.++.+||.+||+.||.
T Consensus       261 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~  340 (357)
T PHA03209        261 PSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAA  340 (357)
T ss_pred             CCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcc
Confidence            111         0111111100    0000                          000124677888999999999999


Q ss_pred             CCCCHHHHHcCCcccC
Q 009980          289 RRPSAQELLNHPWVIG  304 (521)
Q Consensus       289 ~R~t~~~~l~h~~~~~  304 (521)
                      +|||+.++|+||||+.
T Consensus       341 ~Rpta~e~l~hp~f~~  356 (357)
T PHA03209        341 MRPSAEEILNYPMFAQ  356 (357)
T ss_pred             cCcCHHHHhcCchhcc
Confidence            9999999999999964

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=100.00  E-value=6.9e-43  Score=333.18  Aligned_cols=253  Identities=26%  Similarity=0.460  Sum_probs=214.6

Q ss_pred             ceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHH
Q 009980           11 EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILV   90 (521)
Q Consensus        11 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   90 (521)
                      .|++.+.||.|++|.||+|.++.  +++.||+|.+.......                          .....+.+|+.+
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~--~~~~~~~k~~~~~~~~~--------------------------~~~~~~~~e~~~   52 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRT--DGKQYVIKKLNLRNASR--------------------------RERKAAEQEAQL   52 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcC--CCcEEEEEEEehhhcCH--------------------------HHHHHHHHHHHH
Confidence            59999999999999999999987  67899999986532211                          123457789999


Q ss_pred             HHHHhhccCCCCCccceeEEEEe-CCeEEEEEeccCCCchHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecc
Q 009980           91 MRKIVENVSPHPNVIDLYDVYED-QNGVHLILELCSGGELFDRIVA--QERYMEVGAAAVIRQIAEGLAALHQANIVHRD  167 (521)
Q Consensus        91 l~~l~~~~~~hpniv~~~~~~~~-~~~~~lv~e~~~gg~L~~~l~~--~~~~~~~~~~~i~~qil~al~~lH~~~i~H~d  167 (521)
                      ++++     +|||++++++.+.. +..+|+||||++|++|.+++..  ...+++.++..++.|++.|+.|||++|++|||
T Consensus        53 l~~l-----~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~d  127 (257)
T cd08223          53 LSQL-----KHPNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRD  127 (257)
T ss_pred             HHhC-----CCCCeeeeeeeecCCCCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccC
Confidence            9988     99999999998864 4468999999999999998876  34589999999999999999999999999999


Q ss_pred             CCCCcEEEeeCCCCCCEEEeecCCCccCCCC-CCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCC
Q 009980          168 LKPENCLFLNDREDSPLKIMDFGLSSVEGYT-DPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIA  246 (521)
Q Consensus       168 lkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~  246 (521)
                      |||+||++   +.++.++|+|||++...... .......|++.|+|||++.+..++.++|+||+|+++|+|++|+.||..
T Consensus       128 i~p~nil~---~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~  204 (257)
T cd08223         128 LKTQNVFL---TRTNIIKVGDLGIARVLENQCDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNA  204 (257)
T ss_pred             CCchhEEE---ecCCcEEEecccceEEecccCCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCC
Confidence            99999999   67788999999998754322 222344689999999999988899999999999999999999999988


Q ss_pred             CCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcc
Q 009980          247 QSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV  302 (521)
Q Consensus       247 ~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~  302 (521)
                      .+.......+..+..+..   ...+++.+.+++.+||+.||.+|||+.++++||||
T Consensus       205 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~  257 (257)
T cd08223         205 KDMNSLVYRIIEGKLPPM---PKDYSPELGELIATMLSKRPEKRPSVKSILRQPYI  257 (257)
T ss_pred             CCHHHHHHHHHhcCCCCC---ccccCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence            777666666666554322   24588999999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=3.7e-43  Score=340.62  Aligned_cols=261  Identities=26%  Similarity=0.383  Sum_probs=212.8

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ++|++.+.||+|+||.||+|++..  ++..||+|.+.....                           ......+.+|+.
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~--~~~~~a~k~~~~~~~---------------------------~~~~~~~~~e~~   51 (286)
T cd06622           1 DEIEVLDELGKGNYGSVYKVLHRP--TGVTMAMKEIRLELD---------------------------ESKFNQIIMELD   51 (286)
T ss_pred             ChhhhhhhhcccCCeEEEEEEEcC--CCcEEEEEEeecccC---------------------------HHHHHHHHHHHH
Confidence            579999999999999999999987  788999999853211                           011245778999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH-CCCee
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ---ERYMEVGAAAVIRQIAEGLAALHQ-ANIVH  165 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~---~~~~~~~~~~i~~qil~al~~lH~-~~i~H  165 (521)
                      +++++     +||||+++++.+..++.+|+||||++|++|..++...   ..+++..+..++.|++.||.|||+ .||+|
T Consensus        52 ~l~~~-----~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H  126 (286)
T cd06622          52 ILHKA-----VSPYIVDFYGAFFIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIH  126 (286)
T ss_pred             HHHhc-----CCCcHHhhhhheecCCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEee
Confidence            99998     9999999999999999999999999999998887663   378999999999999999999997 59999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccC------CCCchhhhHHHHHHHHHHHh
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQD------RITSKSDMWSLGVILYILLS  239 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~~DiwslG~il~~ll~  239 (521)
                      |||||+||++   +.++.++|+|||++...... ......|++.|+|||.+.+.      .++.++|+||+||++|+|++
T Consensus       127 ~dl~p~nil~---~~~~~~~l~dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~  202 (286)
T cd06622         127 RDVKPTNVLV---NGNGQVKLCDFGVSGNLVAS-LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMAL  202 (286)
T ss_pred             CCCCHHHEEE---CCCCCEEEeecCCcccccCC-ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHh
Confidence            9999999999   66788999999998754322 22334588899999998544      35789999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCCCc
Q 009980          240 GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAK  308 (521)
Q Consensus       240 g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~~~  308 (521)
                      |..||...........+.......+...+..++.++.+||.+||..+|++||++.++++||||......
T Consensus       203 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~~~~  271 (286)
T cd06622         203 GRYPYPPETYANIFAQLSAIVDGDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYKNA  271 (286)
T ss_pred             CCCCCCCcchhhHHHHHHHHhhcCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhccCC
Confidence            999997765544433322211111222334589999999999999999999999999999999765543

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=100.00  E-value=6.1e-43  Score=342.22  Aligned_cols=260  Identities=23%  Similarity=0.400  Sum_probs=221.6

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ++|++.+.||+|+||.||+|.++.  +++.||+|.+.+.....                         ......+.+|+.
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~--~~~~v~ik~~~~~~~~~-------------------------~~~~~~~~~e~~   53 (305)
T cd05609           1 EDFETIKLISNGAYGAVYLVRHKE--TRQRFAMKKINKQNLIL-------------------------RNQIQQVFVERD   53 (305)
T ss_pred             CCceEeeEeecCCCeeEEEEEECC--CCcEEEEEEeehhhhhh-------------------------HHHHHHHHHHHH
Confidence            479999999999999999999988  78899999986532211                         112345778999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCC
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLK  169 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlk  169 (521)
                      +++.+     +||||+++++.+..++.+|+||||++|++|.+++...+.+++..+..++.|++.||.|||++|++|||||
T Consensus        54 ~l~~~-----~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~  128 (305)
T cd05609          54 ILTFA-----ENPFVVSMFCSFETKRHLCMVMEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLK  128 (305)
T ss_pred             HHHhC-----CCCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCc
Confidence            99888     9999999999999999999999999999999999888889999999999999999999999999999999


Q ss_pred             CCcEEEeeCCCCCCEEEeecCCCccCCCCC----------------CcccccCCcccccccccccCCCCchhhhHHHHHH
Q 009980          170 PENCLFLNDREDSPLKIMDFGLSSVEGYTD----------------PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVI  233 (521)
Q Consensus       170 p~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i  233 (521)
                      |+||++   +.++.++|+|||+++......                ......|++.|+|||.+.+..++.++|+||+||+
T Consensus       129 p~NIll---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~v  205 (305)
T cd05609         129 PDNLLI---TSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGII  205 (305)
T ss_pred             hHHEEE---CCCCCEEEeeCCCccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHH
Confidence            999999   778899999999986421100                0112357889999999988889999999999999


Q ss_pred             HHHHHhCCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCC---HHHHHcCCcccCC
Q 009980          234 LYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPS---AQELLNHPWVIGD  305 (521)
Q Consensus       234 l~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t---~~~~l~h~~~~~~  305 (521)
                      +|+|++|..||.+.+..+....+..+....+... ..+|.++.++|.+||..||++|||   +.++|+||||...
T Consensus       206 l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~  279 (305)
T cd05609         206 LYEFLVGCVPFFGDTPEELFGQVISDDIEWPEGD-EALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGL  279 (305)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCcc-ccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccCC
Confidence            9999999999998888777777777655544433 268999999999999999999998   7999999999753

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=100.00  E-value=7e-43  Score=340.17  Aligned_cols=259  Identities=26%  Similarity=0.434  Sum_probs=217.1

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      .....+|++.+.||+|+||.||+|+++.  +++.||+|.+.....                            .....+.
T Consensus        16 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~--~~~~v~ik~~~~~~~----------------------------~~~~~~~   65 (296)
T cd06654          16 GDPKKKYTRFEKIGQGASGTVYTAMDVA--TGQEVAIRQMNLQQQ----------------------------PKKELII   65 (296)
T ss_pred             CCcccceeeEEEecCCCCeEEEEEEECC--CCcEEEEEEEecCCc----------------------------chHHHHH
Confidence            3456799999999999999999999887  788999999864322                            1134577


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      +|+.+++.+     +||||+++++.+..+...|+||||++|++|.+++.. ..+++.++..++.|++.||.|||++||+|
T Consensus        66 ~e~~~l~~~-----~h~~v~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~i~~ql~~aL~~LH~~gi~H  139 (296)
T cd06654          66 NEILVMREN-----KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIH  139 (296)
T ss_pred             HHHHHHHhC-----CCCCEeeEEEEEEeCCEEEEeecccCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence            899999888     999999999999999999999999999999998864 46899999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC-CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCC
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF  244 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf  244 (521)
                      |||||+||++   +.++.++|+|||++....... ......|++.|+|||.+.+..++.++||||+||++|+|++|++||
T Consensus       140 ~dLkp~Nill---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf  216 (296)
T cd06654         140 RDIKSDNILL---GMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY  216 (296)
T ss_pred             CCCCHHHEEE---cCCCCEEECccccchhccccccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCC
Confidence            9999999999   677889999999987543322 123346899999999998888899999999999999999999999


Q ss_pred             CCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccC
Q 009980          245 IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIG  304 (521)
Q Consensus       245 ~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~  304 (521)
                      ...+.......+..... ........+++.+.+++.+||..+|++|||+.++++|||+..
T Consensus       217 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~  275 (296)
T cd06654         217 LNENPLRALYLIATNGT-PELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKI  275 (296)
T ss_pred             CCCCHHHhHHHHhcCCC-CCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhc
Confidence            87765444333333221 121223568899999999999999999999999999999964

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-43  Score=344.59  Aligned_cols=244  Identities=30%  Similarity=0.435  Sum_probs=211.2

Q ss_pred             eeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHH
Q 009980           12 YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVM   91 (521)
Q Consensus        12 Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l   91 (521)
                      +++++.||+|.||.||.|....   ...||+|.++...                             .....+.+|+.+|
T Consensus       208 l~l~~~LG~G~FG~V~~g~~~~---~~~vavk~ik~~~-----------------------------m~~~~f~~Ea~iM  255 (468)
T KOG0197|consen  208 LKLIRELGSGQFGEVWLGKWNG---STKVAVKTIKEGS-----------------------------MSPEAFLREAQIM  255 (468)
T ss_pred             HHHHHHhcCCccceEEEEEEcC---CCcccceEEeccc-----------------------------cChhHHHHHHHHH
Confidence            4456789999999999999874   4479999986432                             2344578999999


Q ss_pred             HHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCC
Q 009980           92 RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA--QERYMEVGAAAVIRQIAEGLAALHQANIVHRDLK  169 (521)
Q Consensus        92 ~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~--~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlk  169 (521)
                      ++|     .|+|||++++++..+..+||||||++.|+|.+++..  .+.+...+...++.|||+|++||+++++|||||-
T Consensus       256 k~L-----~H~~lV~l~gV~~~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLA  330 (468)
T KOG0197|consen  256 KKL-----RHEKLVKLYGVCTKQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLA  330 (468)
T ss_pred             HhC-----cccCeEEEEEEEecCCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhh
Confidence            999     999999999999999999999999999999999987  5678999999999999999999999999999999


Q ss_pred             CCcEEEeeCCCCCCEEEeecCCCccCCCCCC--cccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CCCCCCC
Q 009980          170 PENCLFLNDREDSPLKIMDFGLSSVEGYTDP--VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIA  246 (521)
Q Consensus       170 p~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~pf~~  246 (521)
                      +.||||   +.+..+||+|||+|+......-  ..+.--+..|.|||.+..+.++.++||||+||+||||+| |+.||.+
T Consensus       331 ARNiLV---~~~~~vKIsDFGLAr~~~d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~  407 (468)
T KOG0197|consen  331 ARNILV---DEDLVVKISDFGLARLIGDDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPG  407 (468)
T ss_pred             hhheee---ccCceEEEcccccccccCCCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCC
Confidence            999999   7888999999999995432221  111122456999999999999999999999999999999 9999999


Q ss_pred             CCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          247 QSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       247 ~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      .+..+..+.+.+|..-+   .+..+|+++.+++..||..+|++|||++.+..
T Consensus       408 msn~ev~~~le~GyRlp---~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~  456 (468)
T KOG0197|consen  408 MSNEEVLELLERGYRLP---RPEGCPDEVYELMKSCWHEDPEDRPTFETLRE  456 (468)
T ss_pred             CCHHHHHHHHhccCcCC---CCCCCCHHHHHHHHHHhhCCcccCCCHHHHHH
Confidence            99999999999985432   23679999999999999999999999986553

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=7.6e-43  Score=343.45  Aligned_cols=259  Identities=29%  Similarity=0.459  Sum_probs=220.4

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ++|++.+.||+|++|.||+|.+..  +++.||+|.+.+.....                         ......+..|+.
T Consensus         1 ~~y~~~~~ig~g~~g~vy~~~~~~--~~~~~aiK~~~~~~~~~-------------------------~~~~~~~~~e~~   53 (316)
T cd05574           1 KHFKKIKLLGKGDVGRVFLVRLKG--TGKLFALKVLDKKEMIK-------------------------RNKVKRVLTEQE   53 (316)
T ss_pred             CceEEeeeecCCccEEEEEEEEcC--CCcEEEEEEEeccccch-------------------------HHHHHHHHHHHH
Confidence            479999999999999999999987  78899999987532211                         012345788999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecc
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ--ERYMEVGAAAVIRQIAEGLAALHQANIVHRD  167 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~al~~lH~~~i~H~d  167 (521)
                      +++.+     +||||+++++.+......|+||||+.|++|.+++...  ..+++..+..++.|++.||.|||+.|++|+|
T Consensus        54 ~l~~l-----~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~d  128 (316)
T cd05574          54 ILATL-----DHPFLPTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRD  128 (316)
T ss_pred             HHHhC-----CCCCchhheeeeecCCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccC
Confidence            99998     8999999999999999999999999999999988754  5689999999999999999999999999999


Q ss_pred             CCCCcEEEeeCCCCCCEEEeecCCCccCCCCC------------------------------CcccccCCcccccccccc
Q 009980          168 LKPENCLFLNDREDSPLKIMDFGLSSVEGYTD------------------------------PVVGLFGSIDYVSPEALL  217 (521)
Q Consensus       168 lkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~------------------------------~~~~~~gt~~y~aPE~~~  217 (521)
                      |||+||++   +.++.++|+|||++.......                              ......||..|+|||++.
T Consensus       129 lkp~Nili---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~  205 (316)
T cd05574         129 LKPENILL---HESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVIS  205 (316)
T ss_pred             CChHHeEE---cCCCCEEEeecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHc
Confidence            99999999   667889999999986432211                              011236888999999999


Q ss_pred             cCCCCchhhhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCC----H
Q 009980          218 QDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPS----A  293 (521)
Q Consensus       218 ~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t----~  293 (521)
                      +..++.++||||||+++|+|++|..||.+.+.......+......++..  ..+++.++++|.+||..||++|||    +
T Consensus       206 ~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~R~s~~~~~  283 (316)
T cd05574         206 GDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNILKKEVTFPGS--PPVSSSARDLIRKLLVKDPSKRLGSKRGA  283 (316)
T ss_pred             CCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHhcCCccCCCc--cccCHHHHHHHHHHccCCHhHCCCchhhH
Confidence            8889999999999999999999999999888777777766555444332  237999999999999999999999    9


Q ss_pred             HHHHcCCcccCC
Q 009980          294 QELLNHPWVIGD  305 (521)
Q Consensus       294 ~~~l~h~~~~~~  305 (521)
                      +++|+||||++.
T Consensus       284 ~~ll~~~~~~~~  295 (316)
T cd05574         284 AEIKQHPFFRGV  295 (316)
T ss_pred             HHHHcCchhhcC
Confidence            999999999764

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=100.00  E-value=3.7e-43  Score=348.89  Aligned_cols=254  Identities=24%  Similarity=0.376  Sum_probs=202.8

Q ss_pred             cccceeecccccccCceEEEEeEEcc---CCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKT---CGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALL   84 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~---~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (521)
                      -.++|++.+.||+|+||.||+|.+..   ..+++.||||++......                           .....+
T Consensus         5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~---------------------------~~~~~~   57 (338)
T cd05102           5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATA---------------------------SEHKAL   57 (338)
T ss_pred             chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccch---------------------------HHHHHH
Confidence            35789999999999999999998531   124578999998632110                           123457


Q ss_pred             HHHHHHHHHHhhccCCCCCccceeEEEEeC-CeEEEEEeccCCCchHHHHHhc---------------------------
Q 009980           85 TNEILVMRKIVENVSPHPNVIDLYDVYEDQ-NGVHLILELCSGGELFDRIVAQ---------------------------  136 (521)
Q Consensus        85 ~~E~~~l~~l~~~~~~hpniv~~~~~~~~~-~~~~lv~e~~~gg~L~~~l~~~---------------------------  136 (521)
                      .+|+.++.++    .+||||+++++++... +.+|+||||++||+|.+++...                           
T Consensus        58 ~~E~~~l~~l----~~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  133 (338)
T cd05102          58 MSELKILIHI----GNHLNVVNLLGACTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRV  133 (338)
T ss_pred             HHHHHHHHHh----ccCcceeeEEeEecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhcc
Confidence            8899999887    4799999999988764 4689999999999999988653                           


Q ss_pred             -----------------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEeeCCCC
Q 009980          137 -----------------------------------ERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRED  181 (521)
Q Consensus       137 -----------------------------------~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~~~~~~~  181 (521)
                                                         .++++..+..++.||+.||.|||++||+||||||+|||+   +.+
T Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~---~~~  210 (338)
T cd05102         134 DRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILL---SEN  210 (338)
T ss_pred             ccccccccCCccccccccccCcccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEE---cCC
Confidence                                               237788899999999999999999999999999999999   677


Q ss_pred             CCEEEeecCCCccCCCCC---CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCCcHHH-HHHH
Q 009980          182 SPLKIMDFGLSSVEGYTD---PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQK-QQMI  256 (521)
Q Consensus       182 ~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~-~~~i  256 (521)
                      +.+||+|||+++......   ......+++.|+|||++.+..++.++||||+||++|+|++ |.+||.+....+. ...+
T Consensus       211 ~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~  290 (338)
T cd05102         211 NVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRL  290 (338)
T ss_pred             CcEEEeecccccccccCcchhcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHH
Confidence            889999999997543221   1122346678999999998899999999999999999997 9999987654433 3333


Q ss_pred             HcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          257 MAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       257 ~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      ..+....   ....+++.+.+++.+||..||.+|||+.++++
T Consensus       291 ~~~~~~~---~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~  329 (338)
T cd05102         291 KDGTRMR---APENATPEIYRIMLACWQGDPKERPTFSALVE  329 (338)
T ss_pred             hcCCCCC---CCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            3333221   12467899999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=100.00  E-value=1.2e-42  Score=338.53  Aligned_cols=257  Identities=26%  Similarity=0.463  Sum_probs=218.1

Q ss_pred             cccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      ...+|++.+.||.|+||.||+|++..  +++.||+|.+.....                            .....+.+|
T Consensus        17 ~~~~y~~~~~lg~g~~g~vy~~~~~~--~~~~v~iK~~~~~~~----------------------------~~~~~~~~e   66 (296)
T cd06655          17 PKKKYTRYEKIGQGASGTVFTAIDVA--TGQEVAIKQINLQKQ----------------------------PKKELIINE   66 (296)
T ss_pred             CcceEEEEEEEecCCCeEEEEEEEcC--CCcEEEEEEEecccC----------------------------chHHHHHHH
Confidence            44679999999999999999999887  788999999864221                            113457889


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecc
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRD  167 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~d  167 (521)
                      +.+++.+     +||||+++++++...+.+|+|+||+.|++|.+++.. ..+++.++..++.|++.||.|||++|++|||
T Consensus        67 ~~~l~~l-----~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~l~~al~~LH~~~i~H~d  140 (296)
T cd06655          67 ILVMKEL-----KNPNIVNFLDSFLVGDELFVVMEYLAGGSLTDVVTE-TCMDEAQIAAVCRECLQALEFLHANQVIHRD  140 (296)
T ss_pred             HHHHHhc-----CCCceeeeeeeEecCceEEEEEEecCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence            9999998     999999999999999999999999999999988765 4689999999999999999999999999999


Q ss_pred             CCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC-cccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCC
Q 009980          168 LKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP-VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIA  246 (521)
Q Consensus       168 lkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~  246 (521)
                      |||+||++   +.++.++|+|||++........ .....|++.|+|||.+.+..++.++|+||+||++|+|++|..||.+
T Consensus       141 L~p~Nili---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~  217 (296)
T cd06655         141 IKSDNVLL---GMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLN  217 (296)
T ss_pred             CCHHHEEE---CCCCCEEEccCccchhcccccccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            99999999   6778899999999875443222 2334688999999999888899999999999999999999999988


Q ss_pred             CCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccC
Q 009980          247 QSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIG  304 (521)
Q Consensus       247 ~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~  304 (521)
                      .+.......+...... ....+..+++.+.++|.+||..||.+|||+.+++.||||..
T Consensus       218 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~  274 (296)
T cd06655         218 ENPLRALYLIATNGTP-ELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKL  274 (296)
T ss_pred             CCHHHHHHHHHhcCCc-ccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhh
Confidence            7765555444433221 22233568999999999999999999999999999999974

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=100.00  E-value=3.4e-43  Score=340.52  Aligned_cols=255  Identities=26%  Similarity=0.409  Sum_probs=205.1

Q ss_pred             ceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHH
Q 009980           11 EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILV   90 (521)
Q Consensus        11 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   90 (521)
                      +|++.+.||+|+||.||+|+++.  +++.||+|.+.......                          .....+.+|+.+
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~--~g~~~~~k~~~~~~~~~--------------------------~~~~~~~~ei~~   52 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRE--THEIVALKRVRLDDDDE--------------------------GVPSSALREICL   52 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECC--CCcEEEEEEeecccccc--------------------------cCccchhHHHHH
Confidence            58999999999999999999988  78899999986532211                          112336789999


Q ss_pred             HHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCC
Q 009980           91 MRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQANIVHRDLK  169 (521)
Q Consensus        91 l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlk  169 (521)
                      ++++     +||||+++++++.+.+.+|+|+||+.+ +|.+.+.. .+.+++..++.++.||+.||.|||++||+|||||
T Consensus        53 l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~  126 (284)
T cd07839          53 LKEL-----KHKNIVRLYDVLHSDKKLTLVFEYCDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLK  126 (284)
T ss_pred             HHhc-----CCCCeeeHHHHhccCCceEEEEecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCC
Confidence            9998     999999999999999999999999975 78777764 5679999999999999999999999999999999


Q ss_pred             CCcEEEeeCCCCCCEEEeecCCCccCCCCC-CcccccCCcccccccccccC-CCCchhhhHHHHHHHHHHHhCCCCC-CC
Q 009980          170 PENCLFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALLQD-RITSKSDMWSLGVILYILLSGYPPF-IA  246 (521)
Q Consensus       170 p~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~~ll~g~~pf-~~  246 (521)
                      |+||++   +.++.++|+|||++....... ......+++.|+|||.+.+. .++.++||||+||++|+|++|..|| .+
T Consensus       127 ~~nil~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~  203 (284)
T cd07839         127 PQNLLI---NKNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPG  203 (284)
T ss_pred             HHHEEE---cCCCcEEECccchhhccCCCCCCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCC
Confidence            999999   677889999999997543322 22334678999999998764 4789999999999999999988885 44


Q ss_pred             CCcHHHHHHHHcCCCCCc-------------------------hhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCc
Q 009980          247 QSNRQKQQMIMAGEFSFY-------------------------EQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPW  301 (521)
Q Consensus       247 ~~~~~~~~~i~~~~~~~~-------------------------~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~  301 (521)
                      .+..+....+........                         .+..+.+++++++||.+||..||.+|||+++++.|||
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~  283 (284)
T cd07839         204 NDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPY  283 (284)
T ss_pred             CCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCC
Confidence            443333333322110000                         1112357899999999999999999999999999999


Q ss_pred             c
Q 009980          302 V  302 (521)
Q Consensus       302 ~  302 (521)
                      |
T Consensus       284 f  284 (284)
T cd07839         284 F  284 (284)
T ss_pred             C
Confidence            7

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=100.00  E-value=1.3e-42  Score=331.00  Aligned_cols=254  Identities=30%  Similarity=0.462  Sum_probs=217.9

Q ss_pred             ceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHH
Q 009980           11 EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILV   90 (521)
Q Consensus        11 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   90 (521)
                      +|++.+.||+|+||.||+|.+..  +++.+|||.+.......                          .....+.+|+.+
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~--~~~~~~ik~~~~~~~~~--------------------------~~~~~~~~e~~~   52 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKA--DQKLVIIKQIPVEQMTK--------------------------DERLAAQNECQV   52 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcC--CCcEEEEEEEecccccc--------------------------HHHHHHHHHHHH
Confidence            59999999999999999999987  78899999987533211                          123458889999


Q ss_pred             HHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 009980           91 MRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ--ERYMEVGAAAVIRQIAEGLAALHQANIVHRDL  168 (521)
Q Consensus        91 l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~al~~lH~~~i~H~dl  168 (521)
                      ++++     +||||+++++.+...+..++||||++|++|.+++...  ..+++..+..++.|++.||.|||++|++|+||
T Consensus        53 l~~~-----~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl  127 (256)
T cd08220          53 LKLL-----SHPNIIEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDL  127 (256)
T ss_pred             HhhC-----CCCchhheeeeEecCCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence            9998     9999999999999999999999999999999999764  35899999999999999999999999999999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCC
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQS  248 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~  248 (521)
                      +|+||++.  ..++.++|+|||++.............|++.|+|||.+.+..++.++|+||+|+++|+|++|+.||...+
T Consensus       128 ~~~nil~~--~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~  205 (256)
T cd08220         128 KTQNILLD--KHKMVVKIGDFGISKILSSKSKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAAN  205 (256)
T ss_pred             CHHHEEEc--CCCCEEEEccCCCceecCCCccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCc
Confidence            99999992  2345689999999987654444444568999999999988888999999999999999999999998887


Q ss_pred             cHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcc
Q 009980          249 NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV  302 (521)
Q Consensus       249 ~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~  302 (521)
                      .......+..+.....   ...+++++++++.+||..+|.+|||+.++++||||
T Consensus       206 ~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p~~  256 (256)
T cd08220         206 LPALVLKIMSGTFAPI---SDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQPIC  256 (256)
T ss_pred             hHHHHHHHHhcCCCCC---CCCcCHHHHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence            7776666665543322   24579999999999999999999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=100.00  E-value=1e-42  Score=339.19  Aligned_cols=261  Identities=27%  Similarity=0.451  Sum_probs=217.7

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      .....+|++.+.||.|+||.||+|.++.  +++.||+|.+.....                            .....+.
T Consensus        15 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~--~~~~vaiK~~~~~~~----------------------------~~~~~~~   64 (297)
T cd06656          15 GDPKKKYTRFEKIGQGASGTVYTAIDIA--TGQEVAIKQMNLQQQ----------------------------PKKELII   64 (297)
T ss_pred             CChhhhceeeeeeccCCCeEEEEEEECC--CCCEEEEEEEecCcc----------------------------chHHHHH
Confidence            4567899999999999999999999887  788999999864321                            1234577


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      +|+.+++.+     +||||+++++++..++..|+||||++|++|.+++.. ..+++..+..++.|++.||.|||+.|++|
T Consensus        65 ~e~~~l~~~-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~~i~H  138 (297)
T cd06656          65 NEILVMREN-----KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALDFLHSNQVIH  138 (297)
T ss_pred             HHHHHHHhC-----CCCCEeeEEEEEecCCEEEEeecccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence            899999888     999999999999999999999999999999998865 56899999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC-cccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCC
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP-VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF  244 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf  244 (521)
                      |||||+||++   +.++.++|+|||++........ .....|++.|+|||.+.+..++.++|+||+||++|+|++|.+||
T Consensus       139 ~dL~p~Nili---~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf  215 (297)
T cd06656         139 RDIKSDNILL---GMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPY  215 (297)
T ss_pred             CCCCHHHEEE---CCCCCEEECcCccceEccCCccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence            9999999999   6778999999999875433222 22346889999999999888999999999999999999999999


Q ss_pred             CCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCC
Q 009980          245 IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDS  306 (521)
Q Consensus       245 ~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~  306 (521)
                      .+.+.......+.... .........++..+++|+.+||..+|++|||+.++++||||....
T Consensus       216 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~  276 (297)
T cd06656         216 LNENPLRALYLIATNG-TPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAK  276 (297)
T ss_pred             CCCCcchheeeeccCC-CCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhcccc
Confidence            7766543332222221 111122345788999999999999999999999999999997543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=100.00  E-value=5.9e-43  Score=345.66  Aligned_cols=256  Identities=21%  Similarity=0.313  Sum_probs=204.2

Q ss_pred             eeccccccc--CceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHH
Q 009980           13 EVTDILGRG--GFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILV   90 (521)
Q Consensus        13 ~~~~~lG~G--~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   90 (521)
                      +++++||+|  +|++||++.++.  +++.||+|.+.......                          .....+.+|+.+
T Consensus         1 ~~~~~ig~G~~~~~~v~~~~~~~--~~~~vaiK~~~~~~~~~--------------------------~~~~~~~~e~~~   52 (327)
T cd08227           1 ELLTVIGRGFEDLMTVNLARYKP--TGEYVTVRRINLEACTN--------------------------EMVTFLQGELHV   52 (327)
T ss_pred             ChhhhccccccceEEEEEEeecc--cCcEEEEEEechhhccH--------------------------HHHHHHHHHHHH
Confidence            357899999  678999999988  88999999986532211                          123457789999


Q ss_pred             HHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 009980           91 MRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ--ERYMEVGAAAVIRQIAEGLAALHQANIVHRDL  168 (521)
Q Consensus        91 l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~al~~lH~~~i~H~dl  168 (521)
                      ++.+     +||||+++++++..++..|+||||+++|+|.+++...  ..+++..++.++.|++.||.|||++||+||||
T Consensus        53 l~~l-----~hpniv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dl  127 (327)
T cd08227          53 SKLF-----NHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSV  127 (327)
T ss_pred             HHhc-----CCCCeeeEEEEEEECCEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCC
Confidence            9888     9999999999999999999999999999999998653  45899999999999999999999999999999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCccCCCCC--------CcccccCCccccccccccc--CCCCchhhhHHHHHHHHHHH
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSSVEGYTD--------PVVGLFGSIDYVSPEALLQ--DRITSKSDMWSLGVILYILL  238 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~~ll  238 (521)
                      ||+||++   +.++.++++||+.+.......        ......++..|+|||++.+  ..++.++||||+||++|+|+
T Consensus       128 kp~Nil~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~  204 (327)
T cd08227         128 KASHILI---SVDGKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELA  204 (327)
T ss_pred             ChhhEEE---ecCCcEEEcccchhhccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHH
Confidence            9999999   667889999998654321110        1112346778999999975  46899999999999999999


Q ss_pred             hCCCCCCCCCcHHHHHHHHcCCCCC------------------------------------------chhhhhccCHHHH
Q 009980          239 SGYPPFIAQSNRQKQQMIMAGEFSF------------------------------------------YEQTWKNISSSAK  276 (521)
Q Consensus       239 ~g~~pf~~~~~~~~~~~i~~~~~~~------------------------------------------~~~~~~~~s~~~~  276 (521)
                      +|+.||..............+..+.                                          ..+....+++.++
T Consensus       205 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (327)
T cd08227         205 NGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFH  284 (327)
T ss_pred             HCCCCCCCcchhHHHHHHhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHH
Confidence            9999998765544433333222110                                          0011124578899


Q ss_pred             HHHHHhccCCCCCCCCHHHHHcCCcccC
Q 009980          277 QLISSLLTVDPNRRPSAQELLNHPWVIG  304 (521)
Q Consensus       277 ~li~~~l~~dp~~R~t~~~~l~h~~~~~  304 (521)
                      +||.+||+.||++|||++++++||||..
T Consensus       285 ~li~~~l~~dP~~Rpt~~ell~~p~f~~  312 (327)
T cd08227         285 HFVEQCLQRNPDARPSASTLLNHSFFKQ  312 (327)
T ss_pred             HHHHHHHhhCchhcCCHHHHhcChhhhh
Confidence            9999999999999999999999999964

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=100.00  E-value=1.3e-42  Score=334.28  Aligned_cols=256  Identities=27%  Similarity=0.478  Sum_probs=210.7

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      ...+.|++.+.||+|+||.||+|..+.  +++.||+|++.....                             ....+.+
T Consensus         3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~--~~~~~aik~~~~~~~-----------------------------~~~~~~~   51 (272)
T cd06637           3 DPAGIFELVELVGNGTYGQVYKGRHVK--TGQLAAIKVMDVTGD-----------------------------EEEEIKQ   51 (272)
T ss_pred             ChhhhhhHHHheeecCCeEEEEEEEcC--CCcEEEEEEEEcCCc-----------------------------cHHHHHH
Confidence            456789999999999999999999987  788999999864321                             1345778


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeC------CeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHH
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQ------NGVHLILELCSGGELFDRIVAQ--ERYMEVGAAAVIRQIAEGLAAL  158 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~------~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~al~~l  158 (521)
                      |+.++.++    .+||||+++++++...      ..+|+||||+.+++|.+++...  ..+++..+..++.|++.||.||
T Consensus        52 e~~~l~~~----~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~L  127 (272)
T cd06637          52 EINMLKKY----SHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHL  127 (272)
T ss_pred             HHHHHHHh----cCCCCeeeEeeEEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHH
Confidence            88888876    3699999999998753      4689999999999999988763  4689999999999999999999


Q ss_pred             HHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCC-CCcccccCCcccccccccc-----cCCCCchhhhHHHHH
Q 009980          159 HQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYT-DPVVGLFGSIDYVSPEALL-----QDRITSKSDMWSLGV  232 (521)
Q Consensus       159 H~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslG~  232 (521)
                      |++||+|+||||+||++   +.++.++|+|||++...... .......|++.|+|||++.     ...++.++|+||+||
T Consensus       128 H~~~ivh~dl~~~nili---~~~~~~~l~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv  204 (272)
T cd06637         128 HQHKVIHRDIKGQNVLL---TENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGI  204 (272)
T ss_pred             HHCCCccCCCCHHHEEE---CCCCCEEEccCCCceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHH
Confidence            99999999999999999   67788999999999764322 1223456899999999986     335788999999999


Q ss_pred             HHHHHHhCCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcc
Q 009980          233 ILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV  302 (521)
Q Consensus       233 il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~  302 (521)
                      ++|+|++|..||...........+.....  .......++..+.+|+.+||..||.+|||+.+++.||||
T Consensus       205 ~l~el~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~  272 (272)
T cd06637         205 TAIEMAEGAPPLCDMHPMRALFLIPRNPA--PRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI  272 (272)
T ss_pred             HHHHHHhCCCCccccCHHHHHHHHhcCCC--CCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence            99999999999976655444443333221  112224578999999999999999999999999999997

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.8e-42  Score=331.29  Aligned_cols=255  Identities=27%  Similarity=0.468  Sum_probs=216.6

Q ss_pred             ccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEI   88 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   88 (521)
                      .++|++.+.||.|+||.||+|.+..  +++.+|+|++.....                            .....+.+|+
T Consensus         2 ~~~~~~~~~l~~g~~~~v~~~~~~~--~~~~~~ik~~~~~~~----------------------------~~~~~~~~e~   51 (262)
T cd06613           2 QEDYELIQRIGSGTYGDVYKARDIA--TGELVAIKVIKLEPG----------------------------DDFEIIQQEI   51 (262)
T ss_pred             ccceEEEEEecCCCceEEEEeEecC--CCCEEEEEEEEcCch----------------------------hhHHHHHHHH
Confidence            4789999999999999999999987  678899999864321                            1235688899


Q ss_pred             HHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecc
Q 009980           89 LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQANIVHRD  167 (521)
Q Consensus        89 ~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~~~i~H~d  167 (521)
                      .+++++     +||||+++++++.+.+.+|++|||+.|++|.+++... ..+++..+..++.|++.||.|||++|++|+|
T Consensus        52 ~~l~~~-----~h~~i~~~~~~~~~~~~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~d  126 (262)
T cd06613          52 SMLKEC-----RHPNIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRD  126 (262)
T ss_pred             HHHHhC-----CCCChhceEEEEEeCCEEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecC
Confidence            999998     9999999999999999999999999999999988776 7899999999999999999999999999999


Q ss_pred             CCCCcEEEeeCCCCCCEEEeecCCCccCCCCC-CcccccCCcccccccccccC---CCCchhhhHHHHHHHHHHHhCCCC
Q 009980          168 LKPENCLFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALLQD---RITSKSDMWSLGVILYILLSGYPP  243 (521)
Q Consensus       168 lkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~~ll~g~~p  243 (521)
                      |+|+||++   +.++.++|+|||++....... ......++..|+|||.+.+.   .++.++|+||+|+++|+|++|.+|
T Consensus       127 l~p~ni~i---~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p  203 (262)
T cd06613         127 IKGANILL---TEDGDVKLADFGVSAQLTATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPP  203 (262)
T ss_pred             CChhhEEE---CCCCCEEECccccchhhhhhhhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCC
Confidence            99999999   677889999999987644322 22345688899999999776   788999999999999999999999


Q ss_pred             CCCCCcHHHHHHHHcCCCCCch-hhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCc
Q 009980          244 FIAQSNRQKQQMIMAGEFSFYE-QTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPW  301 (521)
Q Consensus       244 f~~~~~~~~~~~i~~~~~~~~~-~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~  301 (521)
                      |...+.......+....+..+. .....++.++++++.+||..+|..|||+.+++.|||
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~  262 (262)
T cd06613         204 MFDLHPMRALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF  262 (262)
T ss_pred             CCCCCHHHHHHHHHhccCCCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence            9887766555555444332211 112346788999999999999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=100.00  E-value=1.1e-42  Score=333.55  Aligned_cols=258  Identities=24%  Similarity=0.420  Sum_probs=213.7

Q ss_pred             ceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHH
Q 009980           11 EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILV   90 (521)
Q Consensus        11 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   90 (521)
                      +|++.+.||.|+||.||+|...   +++.+|+|.+........                      ........+.+|+.+
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~~---~~~~~avk~~~~~~~~~~----------------------~~~~~~~~~~~e~~~   55 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLTN---QGQLIAVKQVELDTSNVL----------------------AAEKEYEKLQEEVDL   55 (265)
T ss_pred             CccccceEeccCCeEEEEEEEc---CCCeEEEEEeecCccchh----------------------hHHHHHHHHHHHHHH
Confidence            5899999999999999999864   677899999864322110                      001122457889999


Q ss_pred             HHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCC
Q 009980           91 MRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKP  170 (521)
Q Consensus        91 l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp  170 (521)
                      ++++     +||||+++++++.+.+..|+||||++|++|.+++.....+++..+..++.|++.||.|||+.||+|+||+|
T Consensus        56 l~~l-----~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p  130 (265)
T cd06631          56 LKSL-----KHVNIVQYLGTCLDDNTISIFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKG  130 (265)
T ss_pred             HHhc-----CCCCEeeEeeEeecCCeEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCH
Confidence            9998     99999999999999999999999999999999998888899999999999999999999999999999999


Q ss_pred             CcEEEeeCCCCCCEEEeecCCCccCCC-------CCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCC
Q 009980          171 ENCLFLNDREDSPLKIMDFGLSSVEGY-------TDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPP  243 (521)
Q Consensus       171 ~Nil~~~~~~~~~~kl~Dfg~a~~~~~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~p  243 (521)
                      +||++   +.++.++|+|||++.....       ........|++.|+|||.+.+..++.++|+||+|+++|+|++|..|
T Consensus       131 ~nil~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p  207 (265)
T cd06631         131 NNVML---MPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPP  207 (265)
T ss_pred             HhEEE---CCCCeEEeccchhhHhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCc
Confidence            99999   7788999999999865321       1112234689999999999988899999999999999999999999


Q ss_pred             CCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcc
Q 009980          244 FIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV  302 (521)
Q Consensus       244 f~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~  302 (521)
                      |...+.......+.......+ .....++.++.++|.+||..+|.+|||+.++++||||
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~  265 (265)
T cd06631         208 LASMDRLAAMFYIGAHRGLMP-RLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL  265 (265)
T ss_pred             cccCChHHHHHHhhhccCCCC-CCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence            987665544444433322211 2235689999999999999999999999999999997

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=7.1e-43  Score=337.57  Aligned_cols=259  Identities=30%  Similarity=0.439  Sum_probs=217.9

Q ss_pred             cccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      -.++|++.+.||.|+||.||+|.+..  ++..||+|++.....                            .....+.+|
T Consensus         3 ~~~~~~i~~~l~~g~~~~v~~~~~~~--~~~~~~iK~~~~~~~----------------------------~~~~~~~~e   52 (280)
T cd06611           3 PNDIWEIIGELGDGAFGKVYKAQHKE--TGLFAAAKIIQIESE----------------------------EELEDFMVE   52 (280)
T ss_pred             chhHHHHHHHhcCCCCceEEEEEEcC--CCcEEEEEEEeeCCH----------------------------HHHHHHHHH
Confidence            45789999999999999999999987  778999999853211                            122347789


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQANIVHR  166 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~~~i~H~  166 (521)
                      +.+++++     +||||+++++++..+...|+||||++|++|.+++... ..+++..+..++.|++.||.|||++||+|+
T Consensus        53 ~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~  127 (280)
T cd06611          53 IDILSEC-----KHPNIVGLYEAYFYENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHR  127 (280)
T ss_pred             HHHHHhC-----CCCceeEEEEEEecCCeEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccC
Confidence            9999998     8999999999999999999999999999999988764 569999999999999999999999999999


Q ss_pred             cCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC-CcccccCCcccccccccc-----cCCCCchhhhHHHHHHHHHHHhC
Q 009980          167 DLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALL-----QDRITSKSDMWSLGVILYILLSG  240 (521)
Q Consensus       167 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslG~il~~ll~g  240 (521)
                      ||+|+||++   +.++.++|+|||++....... ......|++.|+|||.+.     ...++.++|+||+|+++|+|++|
T Consensus       128 dl~p~nili---~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g  204 (280)
T cd06611         128 DLKAGNILL---TLDGDVKLADFGVSAKNKSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQM  204 (280)
T ss_pred             CCChhhEEE---CCCCCEEEccCccchhhcccccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhC
Confidence            999999999   778899999999986543222 223346899999999875     34567899999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCC
Q 009980          241 YPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGD  305 (521)
Q Consensus       241 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~  305 (521)
                      ++||...+.......+..+..+.. .....++.++.++|.+||..+|.+|||+.++++|||+...
T Consensus       205 ~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~  268 (280)
T cd06611         205 EPPHHELNPMRVLLKILKSEPPTL-DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQ  268 (280)
T ss_pred             CCCcccCCHHHHHHHHhcCCCCCc-CCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhccc
Confidence            999988777666666665543221 1124578999999999999999999999999999999754

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=100.00  E-value=2.1e-42  Score=333.99  Aligned_cols=254  Identities=23%  Similarity=0.374  Sum_probs=209.0

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ++|++.+.||+|+||.||+|++..  +++.||+|++......                           .....+.+|+.
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~--~~~~~aiK~~~~~~~~---------------------------~~~~~~~~E~~   51 (279)
T cd06619           1 QDIQYQEILGHGNGGTVYKAYHLL--TRRILAVKVIPLDITV---------------------------ELQKQIMSELE   51 (279)
T ss_pred             CcchheeeeccCCCeEEEEEEEcC--CCcEEEEEEEecCCCh---------------------------HHHHHHHHHHH
Confidence            478999999999999999999987  7889999998643110                           12345788999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCC
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLK  169 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlk  169 (521)
                      +++++     +||||+++++++..++..++||||++|++|...    ..+++..+..++.|++.||.|||+.||+|+|||
T Consensus        52 ~l~~l-----~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlk  122 (279)
T cd06619          52 ILYKC-----DSPYIIGFYGAFFVENRISICTEFMDGGSLDVY----RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVK  122 (279)
T ss_pred             HHHhC-----CCCCeeeEEEEEEECCEEEEEEecCCCCChHHh----hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCC
Confidence            99998     999999999999999999999999999998543    357899999999999999999999999999999


Q ss_pred             CCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCc
Q 009980          170 PENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSN  249 (521)
Q Consensus       170 p~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~  249 (521)
                      |+||++   +.++.++|+|||++...... .....+||+.|+|||.+.+..++.++|+||+|+++|+|++|..||.....
T Consensus       123 p~Nill---~~~~~~~l~dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~  198 (279)
T cd06619         123 PSNMLV---NTRGQVKLCDFGVSTQLVNS-IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQK  198 (279)
T ss_pred             HHHEEE---CCCCCEEEeeCCcceecccc-cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcc
Confidence            999999   77889999999999754322 23345789999999999988899999999999999999999999965322


Q ss_pred             H-------HHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCCC
Q 009980          250 R-------QKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSA  307 (521)
Q Consensus       250 ~-------~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~~  307 (521)
                      .       .....+......  .......++++++++.+||..+|.+||+++++++||||.....
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~~~  261 (279)
T cd06619         199 NQGSLMPLQLLQCIVDEDPP--VLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQYND  261 (279)
T ss_pred             cccccchHHHHHHHhccCCC--CCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCcccccccC
Confidence            1       122222222111  1112447889999999999999999999999999999976543

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=100.00  E-value=9.5e-43  Score=347.85  Aligned_cols=264  Identities=28%  Similarity=0.422  Sum_probs=212.2

Q ss_pred             CccccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccH
Q 009980            2 GQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSD   81 (521)
Q Consensus         2 ~~~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (521)
                      |...-.+.++|++.+.||+|+||.||+|.+..  +++.||||++.+.....                          ...
T Consensus         8 ~~~~~~~~~~y~~~~~lg~g~~g~V~~~~~~~--~~~~vaiK~~~~~~~~~--------------------------~~~   59 (353)
T cd07850           8 GDSTFTVLKRYQNLKPIGSGAQGIVCAAYDTV--TGQNVAIKKLSRPFQNV--------------------------THA   59 (353)
T ss_pred             cchhhhhhcceEEEEEeccCCCEEEEEEEECC--CCCEEEEEecCccccCh--------------------------hHH
Confidence            33444678999999999999999999999988  78899999985422110                          112


Q ss_pred             HHHHHHHHHHHHHhhccCCCCCccceeEEEEeC------CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHH
Q 009980           82 ALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQ------NGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGL  155 (521)
Q Consensus        82 ~~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~------~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al  155 (521)
                      ..+.+|+.+++++     +||||++++++|...      ...|+||||+.+ +|.+.+...  +++..+..++.|++.||
T Consensus        60 ~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~--l~~~~~~~~~~ql~~aL  131 (353)
T cd07850          60 KRAYRELVLMKLV-----NHKNIIGLLNVFTPQKSLEEFQDVYLVMELMDA-NLCQVIQMD--LDHERMSYLLYQMLCGI  131 (353)
T ss_pred             HHHHHHHHHHHhc-----CCCCCcceeeeeccCCCccccCcEEEEEeccCC-CHHHHHhhc--CCHHHHHHHHHHHHHHH
Confidence            3466899999998     999999999998644      357999999965 888877654  89999999999999999


Q ss_pred             HHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHH
Q 009980          156 AALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY  235 (521)
Q Consensus       156 ~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~  235 (521)
                      .|||++||+||||||+||++   +.++.+||+|||+++............|++.|+|||.+.+..++.++||||+||++|
T Consensus       132 ~~LH~~gi~H~dlkp~Nil~---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~  208 (353)
T cd07850         132 KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG  208 (353)
T ss_pred             HHHHhCCeeeCCCCHHHEEE---CCCCCEEEccCccceeCCCCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHH
Confidence            99999999999999999999   778899999999998765443334456899999999999999999999999999999


Q ss_pred             HHHhCCCCCCCCCcHHHHHHHHcCCCCCch---------------------------------------hhhhccCHHHH
Q 009980          236 ILLSGYPPFIAQSNRQKQQMIMAGEFSFYE---------------------------------------QTWKNISSSAK  276 (521)
Q Consensus       236 ~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~---------------------------------------~~~~~~s~~~~  276 (521)
                      +|++|+.||...+.......+.......+.                                       ......++.++
T Consensus       209 ~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (353)
T cd07850         209 EMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQAR  288 (353)
T ss_pred             HHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHH
Confidence            999999999876654443333221110000                                       00123466789


Q ss_pred             HHHHHhccCCCCCCCCHHHHHcCCcccC
Q 009980          277 QLISSLLTVDPNRRPSAQELLNHPWVIG  304 (521)
Q Consensus       277 ~li~~~l~~dp~~R~t~~~~l~h~~~~~  304 (521)
                      ++|.+||..||.+|||+.++|.||||..
T Consensus       289 ~li~~~L~~dP~~R~t~~eiL~~~~~~~  316 (353)
T cd07850         289 DLLSKMLVIDPEKRISVDDALQHPYINV  316 (353)
T ss_pred             HHHHHHcCCChhhCcCHHHHhcChhHhh
Confidence            9999999999999999999999999863

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=1.8e-42  Score=332.29  Aligned_cols=260  Identities=28%  Similarity=0.454  Sum_probs=215.7

Q ss_pred             ceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHH
Q 009980           11 EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILV   90 (521)
Q Consensus        11 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   90 (521)
                      +|.+.+.||.|++|.||+|.+..  +++.||+|.+........                   ...........+.+|+.+
T Consensus         1 ~~~~~~~ig~g~~~~v~~a~~~~--~~~~~~~k~~~~~~~~~~-------------------~~~~~~~~~~~~~~e~~~   59 (267)
T cd06628           1 KWIKGALIGSGSFGSVYLGMNAS--SGELMAVKQVELPSVSAS-------------------SKDRKRSMLDALAREIAL   59 (267)
T ss_pred             CccccceeecCCCeEEEEEEecC--CCcEEEEEEecCCCcccc-------------------hhHHHHHHHHHHHHHHHH
Confidence            58899999999999999999987  678999999865322110                   000011122457889999


Q ss_pred             HHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCC
Q 009980           91 MRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKP  170 (521)
Q Consensus        91 l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp  170 (521)
                      ++++     +||||+++++++...+..++||||++|++|.+++...+.+++..+..++.|++.||.|||++|++||||+|
T Consensus        60 l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p  134 (267)
T cd06628          60 LKEL-----QHENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKG  134 (267)
T ss_pred             HHhc-----CCCCeeeEEEEEEeCCccEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCH
Confidence            9998     99999999999999999999999999999999998888899999999999999999999999999999999


Q ss_pred             CcEEEeeCCCCCCEEEeecCCCccCCCCC-------CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCC
Q 009980          171 ENCLFLNDREDSPLKIMDFGLSSVEGYTD-------PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPP  243 (521)
Q Consensus       171 ~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~p  243 (521)
                      +||++   +.++.++|+|||.++......       ......|++.|+|||.+.+..++.++|+||+||++|+|++|+.|
T Consensus       135 ~nil~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p  211 (267)
T cd06628         135 ANILV---DNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHP  211 (267)
T ss_pred             HHEEE---cCCCCEEecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCC
Confidence            99999   778889999999987653211       11234588899999999888899999999999999999999999


Q ss_pred             CCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcc
Q 009980          244 FIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV  302 (521)
Q Consensus       244 f~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~  302 (521)
                      |...+.......+.....+   .....++..+.++|.+||+.||.+|||+.++++||||
T Consensus       212 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~  267 (267)
T cd06628         212 FPDCTQLQAIFKIGENASP---EIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL  267 (267)
T ss_pred             CCCccHHHHHHHHhccCCC---cCCcccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence            9877665554444443221   1224578999999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=100.00  E-value=2.2e-42  Score=335.21  Aligned_cols=256  Identities=27%  Similarity=0.435  Sum_probs=211.7

Q ss_pred             ceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHH
Q 009980           11 EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILV   90 (521)
Q Consensus        11 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   90 (521)
                      +|++.+.||.|+||.||+|.++.  +++.||+|++.......                          .....+.+|+.+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~--~~~~~~vK~~~~~~~~~--------------------------~~~~~~~~e~~~   52 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRE--TGETVALKKVALRRLEG--------------------------GIPNQALREIKA   52 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECC--CCceEEEEEEEcccccc--------------------------hhhHHHHHHHHH
Confidence            59999999999999999999987  78899999987533211                          113457889999


Q ss_pred             HHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCC
Q 009980           91 MRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQANIVHRDLK  169 (521)
Q Consensus        91 l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlk  169 (521)
                      ++++     +||||+++++++..+...|+||||+ |++|.+++.. ...+++.++..++.||+.||.|||+.|++|+|||
T Consensus        53 l~~~-----~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~  126 (286)
T cd07832          53 LQAC-----QHPYVVKLLDVFPHGSGFVLVMEYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLK  126 (286)
T ss_pred             HHhC-----CCCCCcceeeEEecCCeeEEEeccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcC
Confidence            9998     8999999999999999999999999 9999998864 4568999999999999999999999999999999


Q ss_pred             CCcEEEeeCCCCCCEEEeecCCCccCCCCC--CcccccCCcccccccccccC-CCCchhhhHHHHHHHHHHHhCCCCCCC
Q 009980          170 PENCLFLNDREDSPLKIMDFGLSSVEGYTD--PVVGLFGSIDYVSPEALLQD-RITSKSDMWSLGVILYILLSGYPPFIA  246 (521)
Q Consensus       170 p~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~  246 (521)
                      |+||++   +.++.++|+|||++.......  ......|++.|+|||.+.+. .++.++||||+|+++|+|++|.+||.+
T Consensus       127 p~ni~~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~  203 (286)
T cd07832         127 PANLLI---SADGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPG  203 (286)
T ss_pred             HHHEEE---cCCCcEEEeeeeecccccCCCCCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCC
Confidence            999999   667889999999987654332  12345689999999998654 468999999999999999999999987


Q ss_pred             CCcHHHHHHHHcCCCCCc--------------------------hhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCC
Q 009980          247 QSNRQKQQMIMAGEFSFY--------------------------EQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHP  300 (521)
Q Consensus       247 ~~~~~~~~~i~~~~~~~~--------------------------~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~  300 (521)
                      .+.......+........                          ...++.++..+.++|.+||..+|.+|||++++++||
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~  283 (286)
T cd07832         204 ENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHP  283 (286)
T ss_pred             CCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCc
Confidence            766555444433211100                          111235678999999999999999999999999999


Q ss_pred             ccc
Q 009980          301 WVI  303 (521)
Q Consensus       301 ~~~  303 (521)
                      ||.
T Consensus       284 ~~~  286 (286)
T cd07832         284 YFT  286 (286)
T ss_pred             CcC
Confidence            983

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=100.00  E-value=2.3e-42  Score=336.09  Aligned_cols=260  Identities=25%  Similarity=0.398  Sum_probs=215.7

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      ...+.|++.+.||.|+||.||+|++..  +++.||+|++.....                            .....+.+
T Consensus         9 ~~~~~y~i~~~lg~g~~g~vy~~~~~~--~~~~~~~k~~~~~~~----------------------------~~~~~~~~   58 (292)
T cd06644           9 DPNEVWEIIGELGDGAFGKVYKAKNKE--TGALAAAKVIETKSE----------------------------EELEDYMV   58 (292)
T ss_pred             CcchhhhhhheecCCCCeEEEEEEECC--CCceEEEEEeccCCH----------------------------HHHHHHHH
Confidence            355789999999999999999999987  788999999864211                            12344778


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      |+.+++.+     +||||+++++.+..++.+|+||||++|++|..++.. ...+++..+..++.|++.||.|||++|++|
T Consensus        59 e~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H  133 (292)
T cd06644          59 EIEILATC-----NHPYIVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIH  133 (292)
T ss_pred             HHHHHHhC-----CCCcEeeeEEEEEeCCeEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeee
Confidence            99999988     999999999999999999999999999999887754 456899999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCCCC-CCcccccCCcccccccccc-----cCCCCchhhhHHHHHHHHHHHh
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGYT-DPVVGLFGSIDYVSPEALL-----QDRITSKSDMWSLGVILYILLS  239 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslG~il~~ll~  239 (521)
                      |||||+||++   +.++.++|+|||++...... .......+++.|+|||.+.     ...++.++|+|||||++|+|++
T Consensus       134 ~dlkp~Nili---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~  210 (292)
T cd06644         134 RDLKAGNVLL---TLDGDIKLADFGVSAKNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQ  210 (292)
T ss_pred             cCCCcceEEE---cCCCCEEEccCccceeccccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhc
Confidence            9999999999   66788999999998653222 1223446889999999985     3456789999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCC
Q 009980          240 GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGD  305 (521)
Q Consensus       240 g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~  305 (521)
                      |.+||...+.......+.....+.. .....++.++.++|.+||..+|++||++.++++|||+..-
T Consensus       211 g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~  275 (292)
T cd06644         211 IEPPHHELNPMRVLLKIAKSEPPTL-SQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSSV  275 (292)
T ss_pred             CCCCCccccHHHHHHHHhcCCCccC-CCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence            9999987766655555544433211 1224578899999999999999999999999999999753

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=100.00  E-value=1.3e-42  Score=333.05  Aligned_cols=252  Identities=27%  Similarity=0.436  Sum_probs=204.1

Q ss_pred             ccccceeecccc--cccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHH
Q 009980            7 KLTDEYEVTDIL--GRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALL   84 (521)
Q Consensus         7 ~~~~~Y~~~~~l--G~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (521)
                      .+.+.|++.+.+  |.|+||.||++.++.  ++..+|+|.+.+....                                 
T Consensus        11 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~--~~~~~~~k~~~~~~~~---------------------------------   55 (267)
T PHA03390         11 QFLKNCEIVKKLKLIDGKFGKVSVLKHKP--TQKLFVQKIIKAKNFN---------------------------------   55 (267)
T ss_pred             HHHHhhccccceeecCCCceEEEEEEEcC--CCcEEEEEEEehhhcc---------------------------------
Confidence            345678888776  999999999999988  7889999998643211                                 


Q ss_pred             HHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 009980           85 TNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIV  164 (521)
Q Consensus        85 ~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~  164 (521)
                      ..|+.....+    .+||||+++++.+..++.+|+||||++|++|.+++.....+++.++..++.|++.||.|||+.|++
T Consensus        56 ~~e~~~~~~~----~~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~  131 (267)
T PHA03390         56 AIEPMVHQLM----KDNPNFIKLYYSVTTLKGHVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNII  131 (267)
T ss_pred             hhhHHHHHHh----hcCCCEEEEEEEEecCCeeEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            0122222211    279999999999999999999999999999999998888899999999999999999999999999


Q ss_pred             eccCCCCcEEEeeCCCCC-CEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCC
Q 009980          165 HRDLKPENCLFLNDREDS-PLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPP  243 (521)
Q Consensus       165 H~dlkp~Nil~~~~~~~~-~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~p  243 (521)
                      ||||||+||++   +.++ .++|+|||++......   ....|++.|+|||++.+..++.++|+||+|+++|+|++|..|
T Consensus       132 H~dl~p~nil~---~~~~~~~~l~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p  205 (267)
T PHA03390        132 HNDIKLENVLY---DRAKDRIYLCDYGLCKIIGTP---SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHP  205 (267)
T ss_pred             eCCCCHHHEEE---eCCCCeEEEecCccceecCCC---ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCC
Confidence            99999999999   4455 8999999998765432   233588999999999988899999999999999999999999


Q ss_pred             CCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCC-HHHHHcCCccc
Q 009980          244 FIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPS-AQELLNHPWVI  303 (521)
Q Consensus       244 f~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t-~~~~l~h~~~~  303 (521)
                      |.......................++.+|+.+++||.+||+.+|.+||+ ++++|+||||+
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~  266 (267)
T PHA03390        206 FKEDEDEELDLESLLKRQQKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLK  266 (267)
T ss_pred             CCCCCcchhhHHHHHHhhcccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcCCccc
Confidence            9865443321111111112222334578999999999999999999996 69999999996

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.4e-44  Score=352.03  Aligned_cols=262  Identities=28%  Similarity=0.453  Sum_probs=222.5

Q ss_pred             ccccceeecc-----cccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccH
Q 009980            7 KLTDEYEVTD-----ILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSD   81 (521)
Q Consensus         7 ~~~~~Y~~~~-----~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (521)
                      .+.-+|+..+     +||+|.||+||.|+++.  +...+|||-++.....                            ..
T Consensus       567 ~iefeYeyde~~ervVLGKGTYG~VYA~RD~~--tqvrIaIKEIpekdsr----------------------------~~  616 (1226)
T KOG4279|consen  567 KIEFEYEYDESNERVVLGKGTYGTVYAARDMD--TQVRIAIKEIPEKDSR----------------------------EV  616 (1226)
T ss_pred             ceEEEeeecCCCceEEeecCceeEEEeecccc--ceeEEEeeecccccch----------------------------hh
Confidence            3555666643     69999999999999998  8889999998643322                            22


Q ss_pred             HHHHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh-cCCC--CHHHHHHHHHHHHHHHHHH
Q 009980           82 ALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA-QERY--MEVGAAAVIRQIAEGLAAL  158 (521)
Q Consensus        82 ~~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~~--~~~~~~~i~~qil~al~~l  158 (521)
                      +-+..||...++|     +|.|||++++.+..++++-|.||-++||+|.+++.. .+++  .|..+..+.+||++||.||
T Consensus       617 QPLhEEIaLH~~L-----rHkNIVrYLGs~senGf~kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYL  691 (1226)
T KOG4279|consen  617 QPLHEEIALHSTL-----RHKNIVRYLGSVSENGFFKIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYL  691 (1226)
T ss_pred             ccHHHHHHHHHHH-----hhHhHHHHhhccCCCCeEEEEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhh
Confidence            3478999999999     999999999999999999999999999999999874 5777  8999999999999999999


Q ss_pred             HHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCc-ccccCCcccccccccccC--CCCchhhhHHHHHHHH
Q 009980          159 HQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPV-VGLFGSIDYVSPEALLQD--RITSKSDMWSLGVILY  235 (521)
Q Consensus       159 H~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~-~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~  235 (521)
                      |.+.|||||||-+|+|+.  .-.|.+||.|||-++....-.+. .+..||..|||||++..+  +|+.++|||||||++.
T Consensus       692 Hen~IVHRDIKGDNVLvN--TySGvlKISDFGTsKRLAginP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~v  769 (1226)
T KOG4279|consen  692 HENKIVHRDIKGDNVLVN--TYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMV  769 (1226)
T ss_pred             hhcceeeccccCCcEEEe--eccceEEecccccchhhccCCccccccccchhhhChHhhccCCcCCCchhhhhhccceeE
Confidence            999999999999999993  45688999999999876554444 345699999999999865  5899999999999999


Q ss_pred             HHHhCCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCC
Q 009980          236 ILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDS  306 (521)
Q Consensus       236 ~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~  306 (521)
                      ||.||+|||......+ .....-|-+...++.+..+|.++++||.+|+.++|..||+|.++|..||++...
T Consensus       770 EMATGrPPF~Elgspq-AAMFkVGmyKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~~~  839 (1226)
T KOG4279|consen  770 EMATGRPPFVELGSPQ-AAMFKVGMYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHNN  839 (1226)
T ss_pred             eeccCCCCeeecCChh-HhhhhhcceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccCcccccCC
Confidence            9999999997655443 234455666666666678999999999999999999999999999999998653

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-43  Score=349.78  Aligned_cols=248  Identities=33%  Similarity=0.534  Sum_probs=216.4

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      ..+.+.|++...+|.|+||.|..+.+..  +++.+++|++.+....                                ..
T Consensus       318 ~~~~~~y~~~~~~~~gs~s~~~~~~~~~--t~~~~~vkii~~~~~~--------------------------------~~  363 (612)
T KOG0603|consen  318 APFTESYEFREELGEGSFSAVKYCESSP--TDQEPAVKIISKRADD--------------------------------NQ  363 (612)
T ss_pred             CCcchhhccccccCCCCccceeeeeccc--cccchhheeccccccc--------------------------------cc
Confidence            3578899999999999999999999998  8889999999764221                                23


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      +|+.++...    .+||||+++++++.++.+.|+|||++.|+.|.+.+...+.++ .++..|+.+|+.|+.|||++|++|
T Consensus       364 ~e~~~~~~~----~~h~niv~~~~v~~~~~~~~~v~e~l~g~ell~ri~~~~~~~-~e~~~w~~~lv~Av~~LH~~gvvh  438 (612)
T KOG0603|consen  364 DEIPISLLV----RDHPNIVKSHDVYEDGKEIYLVMELLDGGELLRRIRSKPEFC-SEASQWAAELVSAVDYLHEQGVVH  438 (612)
T ss_pred             cccchhhhh----cCCCcceeecceecCCceeeeeehhccccHHHHHHHhcchhH-HHHHHHHHHHHHHHHHHHhcCeee
Confidence            455555444    499999999999999999999999999999999998877666 889999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCC
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFI  245 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~  245 (521)
                      |||||+|||+.  ++.+.++|+|||.++.....  ..+.+-|..|.|||++....|+++||+||||++||+||+|+.||.
T Consensus       439 RDLkp~NIL~~--~~~g~lrltyFG~a~~~~~~--~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~  514 (612)
T KOG0603|consen  439 RDLKPGNILLD--GSAGHLRLTYFGFWSELERS--CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFA  514 (612)
T ss_pred             cCCChhheeec--CCCCcEEEEEechhhhCchh--hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccc
Confidence            99999999993  46788999999999876543  444566888999999999999999999999999999999999998


Q ss_pred             CCCcH-HHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcc
Q 009980          246 AQSNR-QKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV  302 (521)
Q Consensus       246 ~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~  302 (521)
                      ..... ++...+..+.+.      ..+|..+++||+.||++||.+||++.+++.|||+
T Consensus       515 ~~P~~~ei~~~i~~~~~s------~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~  566 (612)
T KOG0603|consen  515 AHPAGIEIHTRIQMPKFS------ECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF  566 (612)
T ss_pred             cCCchHHHHHhhcCCccc------cccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence            77666 666666666554      5699999999999999999999999999999999

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=100.00  E-value=2.8e-42  Score=328.87  Aligned_cols=253  Identities=30%  Similarity=0.467  Sum_probs=220.4

Q ss_pred             ceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHH
Q 009980           11 EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILV   90 (521)
Q Consensus        11 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   90 (521)
                      +|++.+.||.|+||.||.+++..  +++.+|+|.+.......                          .....+.+|+.+
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~--~~~~~~~k~~~~~~~~~--------------------------~~~~~~~~e~~~   52 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTE--DDSLVVWKEVNLTRLSE--------------------------KERRDALNEIVI   52 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcC--CCcEEEEEEEeecccch--------------------------hHHHHHHHHHHH
Confidence            69999999999999999999987  78899999986433211                          123457789999


Q ss_pred             HHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 009980           91 MRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ--ERYMEVGAAAVIRQIAEGLAALHQANIVHRDL  168 (521)
Q Consensus        91 l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~al~~lH~~~i~H~dl  168 (521)
                      ++++     +||||+++++++.+.+..+++|||++|++|.+.+...  ..+++..+..++.|++.||.|||+.|++|+||
T Consensus        53 l~~~-----~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl  127 (256)
T cd08221          53 LSLL-----QHPNIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDI  127 (256)
T ss_pred             HHhC-----CCCCeeEEEeEEecCCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Confidence            9998     9999999999999999999999999999999999765  46899999999999999999999999999999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCccCCCCC-CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQ  247 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~  247 (521)
                      +|+||++   +.++.+||+|||++....... ......|++.|+|||.+.+..++.++|+||+|+++|+|++|..||...
T Consensus       128 ~p~ni~~---~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~  204 (256)
T cd08221         128 KTLNIFL---TKAGLIKLGDFGISKILGSEYSMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDAT  204 (256)
T ss_pred             ChHhEEE---eCCCCEEECcCcceEEcccccccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCC
Confidence            9999999   667889999999987653332 223456899999999998888899999999999999999999999988


Q ss_pred             CcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcc
Q 009980          248 SNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV  302 (521)
Q Consensus       248 ~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~  302 (521)
                      +..+....+..+.+....   ..++.++.+++.+||..+|.+|||+.++++|||+
T Consensus       205 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~l  256 (256)
T cd08221         205 NPLNLVVKIVQGNYTPVV---SVYSSELISLVHSLLQQDPEKRPTADEVLDQPLL  256 (256)
T ss_pred             CHHHHHHHHHcCCCCCCc---cccCHHHHHHHHHHcccCcccCCCHHHHhhCcCC
Confidence            888888788777655432   5678999999999999999999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=100.00  E-value=1.7e-42  Score=332.35  Aligned_cols=256  Identities=30%  Similarity=0.479  Sum_probs=215.9

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ++|++.+.||.|+||.||+|....  ++..+|+|++......                           .....+.+|+.
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~--~~~~~~ik~~~~~~~~---------------------------~~~~~~~~e~~   51 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLP--NNEKVAIKRIDLEKCQ---------------------------TSVDELRKEVQ   51 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcC--CCcEEEEEEeccCCcc---------------------------hHHHHHHHHHH
Confidence            579999999999999999999887  7789999998642211                           13456889999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ---ERYMEVGAAAVIRQIAEGLAALHQANIVHR  166 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~---~~~~~~~~~~i~~qil~al~~lH~~~i~H~  166 (521)
                      .++.+     +||||+++++.+..++..|+|||++.|++|.+++...   ..+++..+..++.|++.||.|||+.|++||
T Consensus        52 ~l~~l-----~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~  126 (267)
T cd06610          52 AMSQC-----NHPNVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHR  126 (267)
T ss_pred             HHHhc-----CCCCEEEEEEEEeeCCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence            99988     9999999999999999999999999999999999764   458999999999999999999999999999


Q ss_pred             cCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC-----cccccCCcccccccccccC-CCCchhhhHHHHHHHHHHHhC
Q 009980          167 DLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP-----VVGLFGSIDYVSPEALLQD-RITSKSDMWSLGVILYILLSG  240 (521)
Q Consensus       167 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~~ll~g  240 (521)
                      ||+|+||++   +.++.++|+|||++........     .....|++.|+|||.+... .++.++|+||+||++|+|++|
T Consensus       127 ~l~p~ni~~---~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g  203 (267)
T cd06610         127 DIKAGNILL---GEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATG  203 (267)
T ss_pred             CCCHHhEEE---cCCCCEEEcccchHHHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhC
Confidence            999999999   6678899999999875443221     1334689999999998766 788999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHHcCCCCCchh--hhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcc
Q 009980          241 YPPFIAQSNRQKQQMIMAGEFSFYEQ--TWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV  302 (521)
Q Consensus       241 ~~pf~~~~~~~~~~~i~~~~~~~~~~--~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~  302 (521)
                      +.||...+.......+..........  .+..+++.+.+++.+||..||++|||+.+++.||||
T Consensus       204 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~  267 (267)
T cd06610         204 AAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF  267 (267)
T ss_pred             CCCccccChhhhHHHHhcCCCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence            99998777666555555443322111  124688999999999999999999999999999997

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=100.00  E-value=5.7e-43  Score=334.02  Aligned_cols=253  Identities=26%  Similarity=0.440  Sum_probs=216.6

Q ss_pred             ceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHH
Q 009980           11 EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILV   90 (521)
Q Consensus        11 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   90 (521)
                      +|++.+.||.|+||.||+|.+..  ++..||+|++.+.....                         ......+.+|+.+
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~--~~~~~~ik~~~~~~~~~-------------------------~~~~~~~~~e~~~   53 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRD--TKKMFAMKYMNKQKCVE-------------------------KGSVRNVLNERRI   53 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEcc--CCcEEEEEEEehhhhcc-------------------------hhHHHHHHHHHHH
Confidence            58999999999999999999987  78899999997543211                         0123468889999


Q ss_pred             HHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCC
Q 009980           91 MRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKP  170 (521)
Q Consensus        91 l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp  170 (521)
                      ++++     +||||+++++++.++...|+||||+.|++|.+++.....+++..+..++.||+.||.|||++|++|+||+|
T Consensus        54 l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~  128 (258)
T cd05578          54 LQEL-----NHPFLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKP  128 (258)
T ss_pred             HHhC-----CCCChHHHHHhhcCCCeEEEEEeCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCH
Confidence            9998     99999999999999999999999999999999998877899999999999999999999999999999999


Q ss_pred             CcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCc-
Q 009980          171 ENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSN-  249 (521)
Q Consensus       171 ~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-  249 (521)
                      +||++   +.++.++|+|||++.............|+..|+|||.+.+..++.++|+||+|+++|+|++|..||...+. 
T Consensus       129 ~nil~---~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~  205 (258)
T cd05578         129 DNILL---DEQGHVHITDFNIATKVTPDTLTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT  205 (258)
T ss_pred             HHeEE---cCCCCEEEeecccccccCCCccccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc
Confidence            99999   77888999999998765544334455688999999999888899999999999999999999999987764 


Q ss_pred             --HHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCH--HHHHcCCcc
Q 009980          250 --RQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSA--QELLNHPWV  302 (521)
Q Consensus       250 --~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~--~~~l~h~~~  302 (521)
                        .............    ....++..+.++|.+||..||.+||++  .++++||||
T Consensus       206 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~  258 (258)
T cd05578         206 IRDQIRAKQETADVL----YPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF  258 (258)
T ss_pred             HHHHHHHHhcccccc----CcccCcHHHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence              2222222222222    224578999999999999999999999  999999997

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.5e-42  Score=331.56  Aligned_cols=253  Identities=30%  Similarity=0.452  Sum_probs=211.1

Q ss_pred             ccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHHh
Q 009980           16 DILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIV   95 (521)
Q Consensus        16 ~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~   95 (521)
                      +.||.|+||.||+|.++.  +++.||||++.+......                         .....+..|..++..  
T Consensus         2 ~~l~~g~~~~v~~a~~~~--~~~~vavK~~~~~~~~~~-------------------------~~~~~~~~e~~~~~~--   52 (260)
T cd05611           2 KPISKGAFGSVYLAKKRS--TGDYFAIKVLKKSDMIAK-------------------------NQVTNVKAERAIMMI--   52 (260)
T ss_pred             ccCCcCCCeeEEEEEecC--CCCeEEEEEecchhhhHH-------------------------HHHHHHHHHHHHHhh--
Confidence            579999999999999987  778999999865322110                         001112333333322  


Q ss_pred             hccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q 009980           96 ENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLF  175 (521)
Q Consensus        96 ~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~  175 (521)
                        ..+||||+++++++...+.+|+||||+.|++|.+++...+.+++..+..++.|++.||.|||+.|++||||+|+||++
T Consensus        53 --~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~  130 (260)
T cd05611          53 --QGESPYVAKLYYSFQSKDYLYLVMEYLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLI  130 (260)
T ss_pred             --cCCCCCeeeeeeeEEcCCeEEEEEeccCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE
Confidence              238999999999999999999999999999999999888889999999999999999999999999999999999999


Q ss_pred             eeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCcHHHHHH
Q 009980          176 LNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQM  255 (521)
Q Consensus       176 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~  255 (521)
                         +.++.++|+|||++.....   .....|++.|+|||.+.+..++.++||||+|+++|+|++|.+||...+.......
T Consensus       131 ---~~~~~~~l~dfg~~~~~~~---~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~  204 (260)
T cd05611         131 ---DQTGHLKLTDFGLSRNGLE---NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDN  204 (260)
T ss_pred             ---CCCCcEEEeecccceeccc---cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHH
Confidence               6778899999999875432   2234588999999999888889999999999999999999999998888777777


Q ss_pred             HHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCC---HHHHHcCCcccCC
Q 009980          256 IMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPS---AQELLNHPWVIGD  305 (521)
Q Consensus       256 i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t---~~~~l~h~~~~~~  305 (521)
                      +..+...++......+++.+.+++.+||..+|++|||   ++++++||||...
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~  257 (260)
T cd05611         205 ILSRRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSI  257 (260)
T ss_pred             HHhcccCCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhcC
Confidence            7776665555444568999999999999999999995   5899999999754

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=100.00  E-value=1.4e-42  Score=341.77  Aligned_cols=252  Identities=26%  Similarity=0.403  Sum_probs=193.6

Q ss_pred             cccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHH
Q 009980           15 TDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKI   94 (521)
Q Consensus        15 ~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l   94 (521)
                      +..||+|+||.||+|+++...++..||+|.+.....                              ...+.+|+.+++++
T Consensus         6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~------------------------------~~~~~~E~~~l~~l   55 (317)
T cd07867           6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI------------------------------SMSACREIALLREL   55 (317)
T ss_pred             ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCC------------------------------cHHHHHHHHHHHhC
Confidence            468999999999999987655678899999854221                              12367899999998


Q ss_pred             hhccCCCCCccceeEEEEe--CCeEEEEEeccCCCchHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 009980           95 VENVSPHPNVIDLYDVYED--QNGVHLILELCSGGELFDRIVAQ---------ERYMEVGAAAVIRQIAEGLAALHQANI  163 (521)
Q Consensus        95 ~~~~~~hpniv~~~~~~~~--~~~~~lv~e~~~gg~L~~~l~~~---------~~~~~~~~~~i~~qil~al~~lH~~~i  163 (521)
                           +||||+++++++..  +..+|+||||+.+ +|.+.+...         ..+++..+..++.||+.||.|||++||
T Consensus        56 -----~h~niv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i  129 (317)
T cd07867          56 -----KHPNVIALQKVFLSHSDRKVWLLFDYAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWV  129 (317)
T ss_pred             -----CCCCeeeEEEEEeccCCCeEEEEEeeeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence                 99999999999854  5678999999965 787776421         248899999999999999999999999


Q ss_pred             eeccCCCCcEEEeeC-CCCCCEEEeecCCCccCCCCC----CcccccCCccccccccccc-CCCCchhhhHHHHHHHHHH
Q 009980          164 VHRDLKPENCLFLND-REDSPLKIMDFGLSSVEGYTD----PVVGLFGSIDYVSPEALLQ-DRITSKSDMWSLGVILYIL  237 (521)
Q Consensus       164 ~H~dlkp~Nil~~~~-~~~~~~kl~Dfg~a~~~~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~l  237 (521)
                      +||||||+||++..+ +.++.+||+|||+|+......    ......||+.|+|||++.+ ..++.++||||+||++|+|
T Consensus       130 vH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el  209 (317)
T cd07867         130 LHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAEL  209 (317)
T ss_pred             EcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHH
Confidence            999999999999543 355789999999997654322    1234568999999999876 4579999999999999999


Q ss_pred             HhCCCCCCCCCcHH---------HHHHHHcCCCCCc----------------------------------hhhhhccCHH
Q 009980          238 LSGYPPFIAQSNRQ---------KQQMIMAGEFSFY----------------------------------EQTWKNISSS  274 (521)
Q Consensus       238 l~g~~pf~~~~~~~---------~~~~i~~~~~~~~----------------------------------~~~~~~~s~~  274 (521)
                      +||.+||.......         ....+........                                  .......+..
T Consensus       210 ~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (317)
T cd07867         210 LTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSK  289 (317)
T ss_pred             HhCCCCcccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChH
Confidence            99999996543210         0111110000000                                  0000123567


Q ss_pred             HHHHHHHhccCCCCCCCCHHHHHcCCcc
Q 009980          275 AKQLISSLLTVDPNRRPSAQELLNHPWV  302 (521)
Q Consensus       275 ~~~li~~~l~~dp~~R~t~~~~l~h~~~  302 (521)
                      +.+||.+||..||.+|||+.|+|+||||
T Consensus       290 ~~~ll~~~l~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07867         290 VFLLLQKLLTMDPTKRITSEQALQDPYF  317 (317)
T ss_pred             HHHHHHHHhccCcccccCHHHHhcCCCC
Confidence            8899999999999999999999999997

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=100.00  E-value=2e-42  Score=334.77  Aligned_cols=259  Identities=27%  Similarity=0.402  Sum_probs=215.3

Q ss_pred             ccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEI   88 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   88 (521)
                      .+.|++.+.||.|+||.||+|.+..  ++..+|+|.+.....                            .....+.+|+
T Consensus         4 ~~~~~i~~~lg~g~~g~v~~~~~~~--~~~~~~~k~~~~~~~----------------------------~~~~~~~~e~   53 (282)
T cd06643           4 EEFWEIIGELGDGAFGKVYKAQNKE--TGVLAAAKVIDTKSE----------------------------EELEDYMVEI   53 (282)
T ss_pred             HHHHHHHhhcccCCCeEEEEEEECC--CCeEEEEEEeCCCCH----------------------------HHHHHHHHHH
Confidence            3458999999999999999999987  778899999853211                            1123477899


Q ss_pred             HHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecc
Q 009980           89 LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQANIVHRD  167 (521)
Q Consensus        89 ~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~al~~lH~~~i~H~d  167 (521)
                      .+++.+     +||||+++++++..++..|+||||+.+++|..++.. ...+++..+..++.|++.||.|||+.|++|||
T Consensus        54 ~~l~~l-----~h~~ii~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~d  128 (282)
T cd06643          54 DILASC-----DHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRD  128 (282)
T ss_pred             HHHHHC-----CCCCeeeEEEEEeeCCEEEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecC
Confidence            999998     999999999999999999999999999999887764 46799999999999999999999999999999


Q ss_pred             CCCCcEEEeeCCCCCCEEEeecCCCccCCCC-CCcccccCCcccccccccc-----cCCCCchhhhHHHHHHHHHHHhCC
Q 009980          168 LKPENCLFLNDREDSPLKIMDFGLSSVEGYT-DPVVGLFGSIDYVSPEALL-----QDRITSKSDMWSLGVILYILLSGY  241 (521)
Q Consensus       168 lkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslG~il~~ll~g~  241 (521)
                      |||+||++   +.++.++|+|||++...... .......|++.|+|||++.     +..++.++|+||+||++|+|++|.
T Consensus       129 lkp~nili---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~  205 (282)
T cd06643         129 LKAGNILF---TLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIE  205 (282)
T ss_pred             CCcccEEE---ccCCCEEEccccccccccccccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCC
Confidence            99999999   67788999999998754322 1223446899999999984     345778999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCC
Q 009980          242 PPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDS  306 (521)
Q Consensus       242 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~  306 (521)
                      +||...+..+....+........ .....++.++++||.+||..||.+|||+.++++|||+....
T Consensus       206 ~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~  269 (282)
T cd06643         206 PPHHELNPMRVLLKIAKSEPPTL-AQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVNS  269 (282)
T ss_pred             CCccccCHHHHHHHHhhcCCCCC-CCccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEeccC
Confidence            99988776666666555433221 12245789999999999999999999999999999998543

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>PHA03211 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1.6e-42  Score=353.03  Aligned_cols=251  Identities=25%  Similarity=0.371  Sum_probs=204.5

Q ss_pred             ccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEI   88 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   88 (521)
                      ...|.+.+.||+|+||.||+|.+..  +++.||||....                                  ....+|+
T Consensus       168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~--~~~~vavK~~~~----------------------------------~~~~~E~  211 (461)
T PHA03211        168 GLGFAIHRALTPGSEGCVFESSHPD--YPQRVVVKAGWY----------------------------------ASSVHEA  211 (461)
T ss_pred             cCCeEEEEEEccCCCeEEEEEEECC--CCCEEEEecccc----------------------------------cCHHHHH
Confidence            4579999999999999999999988  788999996321                                  1256899


Q ss_pred             HHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecc
Q 009980           89 LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQANIVHRD  167 (521)
Q Consensus        89 ~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~~~i~H~d  167 (521)
                      .+++++     +||||+++++++...+..++|||++. ++|.+++... ..+++..+..|+.||+.||.|||++||+|||
T Consensus       212 ~iL~~L-----~HpnIv~l~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrD  285 (461)
T PHA03211        212 RLLRRL-----SHPAVLALLDVRVVGGLTCLVLPKYR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRD  285 (461)
T ss_pred             HHHHHC-----CCCCCCcEEEEEEECCEEEEEEEccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECc
Confidence            999999     99999999999999999999999995 5888887654 4699999999999999999999999999999


Q ss_pred             CCCCcEEEeeCCCCCCEEEeecCCCccCCCCC---CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCC
Q 009980          168 LKPENCLFLNDREDSPLKIMDFGLSSVEGYTD---PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF  244 (521)
Q Consensus       168 lkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf  244 (521)
                      |||+|||+   +.++.++|+|||+++......   ......||+.|+|||++.+..++.++|||||||++|+|++|..|+
T Consensus       286 LKP~NILl---~~~~~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~l  362 (461)
T PHA03211        286 IKTENVLV---NGPEDICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASL  362 (461)
T ss_pred             CCHHHEEE---CCCCCEEEcccCCceecccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCc
Confidence            99999999   677889999999997643221   122356999999999999999999999999999999999988665


Q ss_pred             CCCC--------cHHHHHHHHcCCCC---C------------------------chhhh---hccCHHHHHHHHHhccCC
Q 009980          245 IAQS--------NRQKQQMIMAGEFS---F------------------------YEQTW---KNISSSAKQLISSLLTVD  286 (521)
Q Consensus       245 ~~~~--------~~~~~~~i~~~~~~---~------------------------~~~~~---~~~s~~~~~li~~~l~~d  286 (521)
                      ....        ..++.+.+......   +                        ....|   ..++.++.+||.+||+.|
T Consensus       363 f~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~D  442 (461)
T PHA03211        363 FSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFD  442 (461)
T ss_pred             ccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccC
Confidence            3322        12233333322110   0                        01112   245678999999999999


Q ss_pred             CCCCCCHHHHHcCCcccC
Q 009980          287 PNRRPSAQELLNHPWVIG  304 (521)
Q Consensus       287 p~~R~t~~~~l~h~~~~~  304 (521)
                      |.+|||+.|+|+||||+.
T Consensus       443 P~~RPsa~elL~hp~f~~  460 (461)
T PHA03211        443 GARRPSAAELLRLPLFQS  460 (461)
T ss_pred             hhhCcCHHHHhhCcccCC
Confidence            999999999999999964

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=100.00  E-value=1.5e-42  Score=334.79  Aligned_cols=253  Identities=28%  Similarity=0.419  Sum_probs=209.5

Q ss_pred             ccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHHhhc
Q 009980           18 LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVEN   97 (521)
Q Consensus        18 lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~   97 (521)
                      ||+|+||+||+|.++.  +++.||+|++.+.....                         ......+.+|+.+++++   
T Consensus         1 lg~g~~g~vy~~~~~~--~~~~~~ik~~~~~~~~~-------------------------~~~~~~~~~e~~~l~~l---   50 (277)
T cd05577           1 LGKGGFGEVCACQVKA--TGKMYACKKLDKKRLKK-------------------------RKGEQMALNEKKILEKV---   50 (277)
T ss_pred             CCCCCceeEEEEEEcC--CCcEEEEEEEehhhhhh-------------------------hhhhHHHHHHHHHHHhC---
Confidence            6999999999999887  78899999987532211                         01233456799999998   


Q ss_pred             cCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q 009980           98 VSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE--RYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLF  175 (521)
Q Consensus        98 ~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~  175 (521)
                        +||||+++++++...+.+|+||||++|++|.+++....  .+++..+..++.|++.||.|||++|++||||+|+||++
T Consensus        51 --~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~  128 (277)
T cd05577          51 --SSRFIVSLAYAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLL  128 (277)
T ss_pred             --CCCCEeeeeeEEecCCeEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE
Confidence              89999999999999999999999999999999997765  79999999999999999999999999999999999999


Q ss_pred             eeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCcHHHHHH
Q 009980          176 LNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQM  255 (521)
Q Consensus       176 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~  255 (521)
                         +.++.++|+|||.+.............++..|+|||.+.+..++.++|+||+|+++|+|++|+.||...........
T Consensus       129 ---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~  205 (277)
T cd05577         129 ---DDHGNVRISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEE  205 (277)
T ss_pred             ---CCCCCEEEccCcchhhhccCCccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHH
Confidence               77788999999998765433333445678899999999888899999999999999999999999977654222222


Q ss_pred             HHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCC-----CHHHHHcCCcccCC
Q 009980          256 IMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRP-----SAQELLNHPWVIGD  305 (521)
Q Consensus       256 i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~-----t~~~~l~h~~~~~~  305 (521)
                      +.......+......+++.+.++|.+||..||.+||     ++.+++.||||...
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~  260 (277)
T cd05577         206 LKRRTLEMAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDL  260 (277)
T ss_pred             HHhccccccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcC
Confidence            332222222233356799999999999999999999     89999999999753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=100.00  E-value=3e-42  Score=332.60  Aligned_cols=259  Identities=28%  Similarity=0.443  Sum_probs=217.9

Q ss_pred             ccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEI   88 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   88 (521)
                      ...|+..+.||.|+||.||+|.++.  ++..||||++.....                           ......+.+|+
T Consensus         3 ~~~y~~~~~lg~g~~~~vy~~~~~~--~~~~vaiK~~~~~~~---------------------------~~~~~~~~~e~   53 (277)
T cd06640           3 EELFTKLERIGKGSFGEVFKGIDNR--TQQVVAIKIIDLEEA---------------------------EDEIEDIQQEI   53 (277)
T ss_pred             HHhhhhhhhcccCCCeEEEEEEEcc--CCEEEEEEEEecccc---------------------------HHHHHHHHHHH
Confidence            4578899999999999999999987  778999999864321                           11234578899


Q ss_pred             HHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 009980           89 LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDL  168 (521)
Q Consensus        89 ~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dl  168 (521)
                      .+++++     .||||+++++++.++..+|+||||+.|++|.+++.. +++++..+..++.|++.||.|||+++++|+||
T Consensus        54 ~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~-~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl  127 (277)
T cd06640          54 TVLSQC-----DSPYVTKYYGSYLKGTKLWIIMEYLGGGSALDLLRA-GPFDEFQIATMLKEILKGLDYLHSEKKIHRDI  127 (277)
T ss_pred             HHHHhC-----CCCCEeeEEEEEEECCEEEEEEecCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCC
Confidence            999988     999999999999999999999999999999998865 57899999999999999999999999999999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCccCCCCC-CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQ  247 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~  247 (521)
                      +|+||++   +.++.++|+|||++....... ......++..|+|||.+.+..++.++|+||+||++|+|++|.+||...
T Consensus       128 ~p~Nil~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~  204 (277)
T cd06640         128 KAANVLL---SEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDM  204 (277)
T ss_pred             ChhhEEE---cCCCCEEEcccccceeccCCccccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCc
Confidence            9999999   677889999999997543322 122345788999999998888999999999999999999999999877


Q ss_pred             CcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCCCc
Q 009980          248 SNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAK  308 (521)
Q Consensus       248 ~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~~~  308 (521)
                      ........+..+..   ......++..+.+++.+||..+|++|||+.++++|||+.....+
T Consensus       205 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~  262 (277)
T cd06640         205 HPMRVLFLIPKNNP---PTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKNAKK  262 (277)
T ss_pred             ChHhHhhhhhcCCC---CCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhhhcchh
Confidence            66655554433322   22234578899999999999999999999999999999765543

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=100.00  E-value=2.4e-42  Score=329.25  Aligned_cols=253  Identities=26%  Similarity=0.442  Sum_probs=214.8

Q ss_pred             ccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEI   88 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   88 (521)
                      .++|++.+.||.|+||.||+|+.+.  +++.||+|.+....                              ....+.+|+
T Consensus         2 ~~~y~~~~~i~~g~~~~v~~~~~~~--~~~~~~~k~~~~~~------------------------------~~~~~~~e~   49 (256)
T cd06612           2 EEVFDILEKLGEGSYGSVYKAIHKE--TGQVVAIKVVPVEE------------------------------DLQEIIKEI   49 (256)
T ss_pred             cccchhhhhhcCCCCeEEEEEEEcC--CCcEEEEEEeecHH------------------------------HHHHHHHHH
Confidence            4789999999999999999999987  67899999985321                              134588999


Q ss_pred             HHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecc
Q 009980           89 LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQANIVHRD  167 (521)
Q Consensus        89 ~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~al~~lH~~~i~H~d  167 (521)
                      .+++++     +||||+++++++.+....|+++||+.|++|.+++.. ...+++..+..++.|++.||.|||+.|++|+|
T Consensus        50 ~~~~~l-----~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~d  124 (256)
T cd06612          50 SILKQC-----DSPYIVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRD  124 (256)
T ss_pred             HHHHhC-----CCCcEeeeeeeeecCCcEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence            999998     999999999999999999999999999999999875 45689999999999999999999999999999


Q ss_pred             CCCCcEEEeeCCCCCCEEEeecCCCccCCCCC-CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCC
Q 009980          168 LKPENCLFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIA  246 (521)
Q Consensus       168 lkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~  246 (521)
                      |+|+||++   +.++.++|+|||++....... ......|++.|+|||++.+..++.++||||+|+++|+|++|++||..
T Consensus       125 l~~~ni~~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~  201 (256)
T cd06612         125 IKAGNILL---NEEGQAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSD  201 (256)
T ss_pred             CCcceEEE---CCCCcEEEcccccchhcccCccccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            99999999   677889999999998654333 22334588899999999888899999999999999999999999987


Q ss_pred             CCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcc
Q 009980          247 QSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV  302 (521)
Q Consensus       247 ~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~  302 (521)
                      .........+....... ......++..+.+++.+||+.||.+|||+.++|.||||
T Consensus       202 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~  256 (256)
T cd06612         202 IHPMRAIFMIPNKPPPT-LSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI  256 (256)
T ss_pred             cchhhhhhhhccCCCCC-CCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence            66554444333322211 11224578899999999999999999999999999997

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=100.00  E-value=2.5e-43  Score=312.10  Aligned_cols=261  Identities=22%  Similarity=0.339  Sum_probs=214.9

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ++.++++.||.|+.|.||+++.+.  ++...|||.+.+....                           .+.+.+...+.
T Consensus        92 ndl~~l~dlGsGtcG~V~k~~~rs--~~~iiAVK~M~rt~Nk---------------------------ee~kRILmDld  142 (391)
T KOG0983|consen   92 NDLENLGDLGSGTCGQVWKMRFRS--TGHIIAVKQMRRTGNK---------------------------EENKRILMDLD  142 (391)
T ss_pred             HHhhhHHhhcCCCccceEEEEEcc--cceEEEEEeecccCCH---------------------------HHHHHHHHhhh
Confidence            455667889999999999999998  8899999999875432                           22344666666


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecc
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIV-AQERYMEVGAAAVIRQIAEGLAALHQA-NIVHRD  167 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~-~~~~~~~~~~~~i~~qil~al~~lH~~-~i~H~d  167 (521)
                      ++..-    -++|+||+.+++|..+..++|.||.+.- .+..++. -.++++|.-+-.+...++.||.||..+ ||+|||
T Consensus       143 vv~~s----~dcpyIV~c~GyFi~n~dV~IcMelMs~-C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRD  217 (391)
T KOG0983|consen  143 VVLKS----HDCPYIVQCFGYFITNTDVFICMELMST-CAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRD  217 (391)
T ss_pred             HHhhc----cCCCeeeeeeeEEeeCchHHHHHHHHHH-HHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecc
Confidence            65543    2689999999999999999999999843 3333332 246799999999999999999999865 899999


Q ss_pred             CCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCccccccccccc---CCCCchhhhHHHHHHHHHHHhCCCCC
Q 009980          168 LKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQ---DRITSKSDMWSLGVILYILLSGYPPF  244 (521)
Q Consensus       168 lkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwslG~il~~ll~g~~pf  244 (521)
                      +||+|||+   +..|++||||||++.....+.......|-+.|||||.+.-   .+|+..+||||||+++++|.||..||
T Consensus       218 vKPSNILl---De~GniKlCDFGIsGrlvdSkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy  294 (391)
T KOG0983|consen  218 VKPSNILL---DERGNIKLCDFGISGRLVDSKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPY  294 (391)
T ss_pred             cCccceEE---ccCCCEEeecccccceeecccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCC
Confidence            99999999   8999999999999988776666667789999999999863   46899999999999999999999999


Q ss_pred             CCCC-cHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCCCc
Q 009980          245 IAQS-NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAK  308 (521)
Q Consensus       245 ~~~~-~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~~~  308 (521)
                      .+.+ +-+.+..+.....+ ..+.-...|+.+++|+..||.+|+.+||.+.++|+|||+......
T Consensus       295 ~~c~tdFe~ltkvln~ePP-~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~ye~a  358 (391)
T KOG0983|consen  295 KGCKTDFEVLTKVLNEEPP-LLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKRYETA  358 (391)
T ss_pred             CCCCccHHHHHHHHhcCCC-CCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcCcceeecchh
Confidence            8854 55666677775543 223335599999999999999999999999999999999866543

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=100.00  E-value=3.8e-42  Score=337.33  Aligned_cols=264  Identities=28%  Similarity=0.434  Sum_probs=213.7

Q ss_pred             cccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      ..++|++.+.||.|+||.||+|.++.  +++.||+|.+.......                          .......+|
T Consensus         5 ~~~~y~~~~~ig~g~~~~v~~~~~~~--~~~~vaiK~~~~~~~~~--------------------------~~~~~~~~E   56 (309)
T cd07845           5 SVTEFEKLNRIGEGTYGIVYRARDTT--SGEIVALKKVRMDNERD--------------------------GIPISSLRE   56 (309)
T ss_pred             cccceeEeeeeeecCCEEEEEEEECC--CCcEEEEEEEEeccCCC--------------------------CCcchhhHH
Confidence            45789999999999999999999987  78899999986432211                          011225679


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEeC--CeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYEDQ--NGVHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQANIV  164 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~~--~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~al~~lH~~~i~  164 (521)
                      +.+++++     +||||+++++++...  +.+|+||||+.+ +|.+.+.. ...+++..+..++.||+.||.|||+.|++
T Consensus        57 ~~~l~~l-----~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~  130 (309)
T cd07845          57 ITLLLNL-----RHPNIVELKEVVVGKHLDSIFLVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFII  130 (309)
T ss_pred             HHHHHhC-----CCCCCcceEEEEecCCCCeEEEEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            9999998     999999999999765  568999999975 78887765 36789999999999999999999999999


Q ss_pred             eccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC-CcccccCCccccccccccc-CCCCchhhhHHHHHHHHHHHhCCC
Q 009980          165 HRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALLQ-DRITSKSDMWSLGVILYILLSGYP  242 (521)
Q Consensus       165 H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~ll~g~~  242 (521)
                      ||||||+||++   +.++.+||+|||++....... ......+++.|+|||.+.+ ..++.++||||+||++|+|++|.+
T Consensus       131 H~dl~p~nil~---~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~  207 (309)
T cd07845         131 HRDLKVSNLLL---TDKGCLKIADFGLARTYGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKP  207 (309)
T ss_pred             cCCCCHHHEEE---CCCCCEEECccceeeecCCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCC
Confidence            99999999999   777899999999997654322 2233346888999999865 457899999999999999999999


Q ss_pred             CCCCCCcHHHHHHHHcCCCCCch--------------------------hhhhccCHHHHHHHHHhccCCCCCCCCHHHH
Q 009980          243 PFIAQSNRQKQQMIMAGEFSFYE--------------------------QTWKNISSSAKQLISSLLTVDPNRRPSAQEL  296 (521)
Q Consensus       243 pf~~~~~~~~~~~i~~~~~~~~~--------------------------~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~  296 (521)
                      ||.+.+..+....+.........                          .....+++.+.+||.+||..||++|||+.++
T Consensus       208 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~i  287 (309)
T cd07845         208 LLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEA  287 (309)
T ss_pred             CCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHH
Confidence            99988877766655442111100                          1112368899999999999999999999999


Q ss_pred             HcCCcccCCCCc
Q 009980          297 LNHPWVIGDSAK  308 (521)
Q Consensus       297 l~h~~~~~~~~~  308 (521)
                      +.||||......
T Consensus       288 l~h~~f~~~~~~  299 (309)
T cd07845         288 LESSYFKEKPLP  299 (309)
T ss_pred             hcChhhccCCCC
Confidence            999999865543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=100.00  E-value=3.1e-42  Score=329.74  Aligned_cols=251  Identities=29%  Similarity=0.487  Sum_probs=214.1

Q ss_pred             ccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHHhhc
Q 009980           18 LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVEN   97 (521)
Q Consensus        18 lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~   97 (521)
                      ||.|++|.||+|++..  +++.||+|++.+.....                         ......+.+|+.+++++   
T Consensus         1 lg~g~~~~v~~~~~~~--~~~~~~iK~~~~~~~~~-------------------------~~~~~~~~~e~~~l~~l---   50 (262)
T cd05572           1 LGVGGFGRVELVKVKS--KNRTFALKCVKKRHIVE-------------------------TGQQEHIFSEKEILEEC---   50 (262)
T ss_pred             CCCCCceEEEEEEECC--CCcEEEEEEEehhcchh-------------------------hhHHHHHHHHHHHHHhC---
Confidence            7999999999999987  78899999997543221                         11235688899999998   


Q ss_pred             cCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEee
Q 009980           98 VSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLN  177 (521)
Q Consensus        98 ~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~~~  177 (521)
                        +||||+++++.+.+++.+|+||||++|++|.+++.....+++..+..++.||+.||.|||++|++|+||+|+||++  
T Consensus        51 --~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv--  126 (262)
T cd05572          51 --NHPFIVKLYRTFKDKKYIYMLMEYCLGGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLL--  126 (262)
T ss_pred             --CCCCEeeeeeeEEcCCccEEEEecCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEE--
Confidence              9999999999999999999999999999999999888889999999999999999999999999999999999999  


Q ss_pred             CCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCC--cHHHHHH
Q 009980          178 DREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQS--NRQKQQM  255 (521)
Q Consensus       178 ~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~--~~~~~~~  255 (521)
                       +.++.++|+|||++.............|++.|+|||.+.+..++.++|+||+|+++|+|++|..||....  .......
T Consensus       127 -~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~  205 (262)
T cd05572         127 -DSNGYVKLVDFGFAKKLKSGQKTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYND  205 (262)
T ss_pred             -cCCCCEEEeeCCcccccCcccccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHH
Confidence             6778899999999986654333334568999999999988889999999999999999999999998776  5555666


Q ss_pred             HHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCC-----HHHHHcCCcccCC
Q 009980          256 IMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPS-----AQELLNHPWVIGD  305 (521)
Q Consensus       256 i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t-----~~~~l~h~~~~~~  305 (521)
                      +..+......  ...++++++++|.+||..+|.+|||     +.++++||||+..
T Consensus       206 ~~~~~~~~~~--~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~  258 (262)
T cd05572         206 ILKGNGKLEF--PNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGF  258 (262)
T ss_pred             HhccCCCCCC--CcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhCC
Confidence            6532222221  1335899999999999999999999     9999999999864

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=100.00  E-value=2.9e-42  Score=328.75  Aligned_cols=253  Identities=26%  Similarity=0.452  Sum_probs=218.3

Q ss_pred             ceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHH
Q 009980           11 EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILV   90 (521)
Q Consensus        11 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   90 (521)
                      +|++.+.||+|+||.||+++++.  +++.||+|.+.......                          .....+.+|+.+
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~--~~~~~~ik~~~~~~~~~--------------------------~~~~~~~~e~~~   52 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKE--DGKQYVIKEINISKMSP--------------------------KEREESRKEVAV   52 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcC--CCCEEEEEEEEhHhCCh--------------------------HHHHHHHHHHHH
Confidence            59999999999999999999987  78899999986532211                          123457889999


Q ss_pred             HHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 009980           91 MRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE--RYMEVGAAAVIRQIAEGLAALHQANIVHRDL  168 (521)
Q Consensus        91 l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~al~~lH~~~i~H~dl  168 (521)
                      ++++     +||||+++++++...+..|+||||+.|++|.+.+....  .+++..+..++.|++.||.|||++|++|+||
T Consensus        53 l~~l-----~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l  127 (256)
T cd08218          53 LSNM-----KHPNIVQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDI  127 (256)
T ss_pred             HHhC-----CCCCeeeeEeeecCCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCC
Confidence            9998     99999999999999999999999999999999887643  5789999999999999999999999999999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCccCCCCCC-cccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSSVEGYTDP-VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQ  247 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~  247 (521)
                      +|+||++   +.++.++|+|||++........ .....|++.|+|||.+.+..++.++|+||+||++|+|++|..||...
T Consensus       128 ~~~nil~---~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~  204 (256)
T cd08218         128 KSQNIFL---TKDGTIKLGDFGIARVLNSTVELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAG  204 (256)
T ss_pred             CHHHEEE---cCCCCEEEeeccceeecCcchhhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCC
Confidence            9999999   6778899999999976543221 22345889999999998888899999999999999999999999888


Q ss_pred             CcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcc
Q 009980          248 SNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV  302 (521)
Q Consensus       248 ~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~  302 (521)
                      ...+....+..+.....   ...++.++.++|.+||..+|.+||++.+++.||||
T Consensus       205 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~  256 (256)
T cd08218         205 NMKNLVLKIIRGSYPPV---SSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI  256 (256)
T ss_pred             CHHHHHHHHhcCCCCCC---cccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence            87777777776665432   24578999999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=100.00  E-value=2.8e-42  Score=336.47  Aligned_cols=264  Identities=29%  Similarity=0.422  Sum_probs=215.4

Q ss_pred             ceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHH
Q 009980           11 EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILV   90 (521)
Q Consensus        11 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   90 (521)
                      +|++.+.||.|+||.||+|.++.  +++.||||.+........                       .......+..|+.+
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~--~~~~v~iK~~~~~~~~~~-----------------------~~~~~~~~~~e~~~   55 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKE--TGRIVAIKKIKLGERKEA-----------------------KDGINFTALREIKL   55 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECC--CCcEEEEEEEeccccccc-----------------------cchhhHHHHHHHHH
Confidence            58999999999999999999987  788999999975433210                       01123446789999


Q ss_pred             HHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCC
Q 009980           91 MRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE-RYMEVGAAAVIRQIAEGLAALHQANIVHRDLK  169 (521)
Q Consensus        91 l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qil~al~~lH~~~i~H~dlk  169 (521)
                      ++++     +||||+++++++.+.+..|+||||+ +++|.+++.... .+++..+..++.||+.||.|||++||+|+||+
T Consensus        56 l~~~-----~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~  129 (298)
T cd07841          56 LQEL-----KHPNIIGLLDVFGHKSNINLVFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLK  129 (298)
T ss_pred             Hhhc-----CCCCChhhhheeecCCEEEEEEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCC
Confidence            9998     8999999999999999999999999 889999998766 79999999999999999999999999999999


Q ss_pred             CCcEEEeeCCCCCCEEEeecCCCccCCCCC-CcccccCCccccccccccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 009980          170 PENCLFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALLQ-DRITSKSDMWSLGVILYILLSGYPPFIAQ  247 (521)
Q Consensus       170 p~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~  247 (521)
                      |+||++   +.++.++|+|||++....... ......+++.|+|||.+.+ ..++.++|+||+||++|+|++|.+||.+.
T Consensus       130 p~nill---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~  206 (298)
T cd07841         130 PNNLLI---ASDGVLKLADFGLARSFGSPNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGD  206 (298)
T ss_pred             hhhEEE---cCCCCEEEccceeeeeccCCCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCC
Confidence            999999   678899999999997654332 2233457888999998854 45789999999999999999999999877


Q ss_pred             CcHHHHHHHHcCCCCCc------------------------hhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCccc
Q 009980          248 SNRQKQQMIMAGEFSFY------------------------EQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVI  303 (521)
Q Consensus       248 ~~~~~~~~i~~~~~~~~------------------------~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~  303 (521)
                      +..+....+........                        ...+..++..+.++|.+||..+|++|||+.+++.||||.
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~  286 (298)
T cd07841         207 SDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFS  286 (298)
T ss_pred             ccHHHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCcccc
Confidence            76555444432111000                        112245678899999999999999999999999999998


Q ss_pred             CCCCc
Q 009980          304 GDSAK  308 (521)
Q Consensus       304 ~~~~~  308 (521)
                      +....
T Consensus       287 ~~~~~  291 (298)
T cd07841         287 NDPAP  291 (298)
T ss_pred             CCCCC
Confidence            76543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=100.00  E-value=3.4e-42  Score=332.39  Aligned_cols=256  Identities=27%  Similarity=0.402  Sum_probs=202.8

Q ss_pred             cccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHHhh
Q 009980           17 ILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVE   96 (521)
Q Consensus        17 ~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~   96 (521)
                      .||+|+||.||+|.+..  +++.||+|.+.+......                         .......+|..+++.+  
T Consensus         1 ~lg~G~~g~Vy~~~~~~--~~~~~aiK~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~--   51 (279)
T cd05633           1 IIGRGGFGEVYGCRKAD--TGKMYAMKCLDKKRIKMK-------------------------QGETLALNERIMLSLV--   51 (279)
T ss_pred             CcccCCCeEEEEEEECC--CCcEEEEEEEEccccccc-------------------------hHHHHHHHHHHHHHHH--
Confidence            48999999999999987  788999999875432210                         1122233444433332  


Q ss_pred             ccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEe
Q 009980           97 NVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFL  176 (521)
Q Consensus        97 ~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~~  176 (521)
                      ...+||||+.+++++..++..|+||||+.|++|.+++...+.+++..+..++.|++.||.|||++||+||||||+||++ 
T Consensus        52 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~-  130 (279)
T cd05633          52 STGDCPFIVCMTYAFHTPDKLCFILDLMNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILL-  130 (279)
T ss_pred             hhCCCCcEeEEEEEEecCCeEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEE-
Confidence            1237999999999999999999999999999999999888889999999999999999999999999999999999999 


Q ss_pred             eCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccc-cCCCCchhhhHHHHHHHHHHHhCCCCCCCCCcHHHHHH
Q 009980          177 NDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALL-QDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQM  255 (521)
Q Consensus       177 ~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~  255 (521)
                        +.++.++|+|||++....... .....||+.|+|||.+. +..++.++|+||+||++|+|++|..||......... .
T Consensus       131 --~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~-~  206 (279)
T cd05633         131 --DEHGHVRISDLGLACDFSKKK-PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH-E  206 (279)
T ss_pred             --CCCCCEEEccCCcceeccccC-ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHH-H
Confidence              778899999999987543322 23346899999999986 456889999999999999999999999754322111 1


Q ss_pred             HHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCC-----CHHHHHcCCcccCCC
Q 009980          256 IMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRP-----SAQELLNHPWVIGDS  306 (521)
Q Consensus       256 i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~-----t~~~~l~h~~~~~~~  306 (521)
                      +...........+..++++++++|.+||..||.+||     |+.++++||||++..
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~~  262 (279)
T cd05633         207 IDRMTLTVNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGID  262 (279)
T ss_pred             HHHHhhcCCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCCC
Confidence            111111222223356899999999999999999999     699999999998743

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=7.5e-44  Score=331.70  Aligned_cols=261  Identities=26%  Similarity=0.422  Sum_probs=226.1

Q ss_pred             cccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      -..+|.++.+||+|+||+|-+|..+.  +.+.||||++++.-.....                       ..  ..-..|
T Consensus       347 ~~tDFnFl~VlGKGSFGKVlLaerkg--tdELyAiKiLkKDViiQdD-----------------------Dv--ectm~E  399 (683)
T KOG0696|consen  347 KATDFNFLMVLGKGSFGKVLLAERKG--TDELYAIKILKKDVIIQDD-----------------------DV--ECTMVE  399 (683)
T ss_pred             eecccceEEEeccCccceeeeecccC--cchhhhhhhhccceeeecC-----------------------cc--cceehh
Confidence            34588999999999999999998876  8889999999876432210                       00  011223


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecc
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRD  167 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~d  167 (521)
                      -++|    +...+-|.+++++.+|++-+++|+||||+.||+|.-+|++-+++.|..+..++..|+-||-+||++||+.||
T Consensus       400 KrvL----AL~~kppFL~qlHScFQTmDRLyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRD  475 (683)
T KOG0696|consen  400 KRVL----ALPGKPPFLVQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRD  475 (683)
T ss_pred             hhhe----ecCCCCchHHHHHHHhhhhhheeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeee
Confidence            3333    223478899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcEEEeeCCCCCCEEEeecCCCccCC-CCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCC
Q 009980          168 LKPENCLFLNDREDSPLKIMDFGLSSVEG-YTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIA  246 (521)
Q Consensus       168 lkp~Nil~~~~~~~~~~kl~Dfg~a~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~  246 (521)
                      ||.+|||+   +..+.+||+|||+++..- ......+.||||.|+|||++..++|+.++|.||+||+||||+.|++||.+
T Consensus       476 LKLDNvmL---d~eGHiKi~DFGmcKEni~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdG  552 (683)
T KOG0696|consen  476 LKLDNVML---DSEGHIKIADFGMCKENIFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDG  552 (683)
T ss_pred             ccccceEe---ccCCceEeeecccccccccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCC
Confidence            99999999   899999999999998532 23445678999999999999999999999999999999999999999999


Q ss_pred             CCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCH-----HHHHcCCcccCCC
Q 009980          247 QSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSA-----QELLNHPWVIGDS  306 (521)
Q Consensus       247 ~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~-----~~~l~h~~~~~~~  306 (521)
                      .++.++.+.|+.....+|    +.+|.++.+++..+|.+.|.+|..+     .++-.||||....
T Consensus       553 eDE~elF~aI~ehnvsyP----KslSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~iD  613 (683)
T KOG0696|consen  553 EDEDELFQAIMEHNVSYP----KSLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRID  613 (683)
T ss_pred             CCHHHHHHHHHHccCcCc----ccccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhcc
Confidence            999999999999988887    5689999999999999999999654     6888999997544

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=100.00  E-value=5.7e-42  Score=328.68  Aligned_cols=258  Identities=26%  Similarity=0.401  Sum_probs=211.2

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      .+|++.+.||+|+||.||+|.+..  ++..||+|.+.......                       ........+.+|+.
T Consensus         2 ~~~~~~~~lg~g~~g~vy~~~~~~--~~~~~~~k~~~~~~~~~-----------------------~~~~~~~~~~~e~~   56 (266)
T cd06651           2 INWRRGKLLGQGAFGRVYLCYDVD--TGRELAAKQVQFDPESP-----------------------ETSKEVSALECEIQ   56 (266)
T ss_pred             CCccccceecCCCCEEEEEEEEcC--CCcEEEEEEeecCcCCc-----------------------hhHHHHHHHHHHHH
Confidence            479999999999999999999987  78899999986532211                       00112235788999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEe--CCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecc
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYED--QNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRD  167 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~--~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~d  167 (521)
                      +++++     +||||+++++++..  ...++++|||+++++|.+++...+.+++.....++.|++.||.|||++||+|||
T Consensus        57 ~l~~l-----~h~~i~~~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~  131 (266)
T cd06651          57 LLKNL-----QHERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRD  131 (266)
T ss_pred             HHHHc-----CCCCeeeEEEEEEcCCCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCC
Confidence            99998     99999999999875  367899999999999999998888899999999999999999999999999999


Q ss_pred             CCCCcEEEeeCCCCCCEEEeecCCCccCCCC----CCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCC
Q 009980          168 LKPENCLFLNDREDSPLKIMDFGLSSVEGYT----DPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPP  243 (521)
Q Consensus       168 lkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~p  243 (521)
                      |+|+||++   +.++.++|+|||++......    .......++..|+|||.+.+..++.++|+||+||++|+|++|++|
T Consensus       132 l~p~nil~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~p  208 (266)
T cd06651         132 IKGANILR---DSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPP  208 (266)
T ss_pred             CCHHHEEE---CCCCCEEEccCCCccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCC
Confidence            99999999   67788999999998754321    111234588899999999888899999999999999999999999


Q ss_pred             CCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCccc
Q 009980          244 FIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVI  303 (521)
Q Consensus       244 f~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~  303 (521)
                      |...........+......  ......+++.+++++ +||..+|++|||++++++||||+
T Consensus       209 f~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp~~~  265 (266)
T cd06651         209 WAEYEAMAAIFKIATQPTN--PQLPSHISEHARDFL-GCIFVEARHRPSAEELLRHPFAQ  265 (266)
T ss_pred             ccccchHHHHHHHhcCCCC--CCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence            9876655544443332211  112245788899999 67778999999999999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=100.00  E-value=6.7e-42  Score=327.70  Aligned_cols=256  Identities=27%  Similarity=0.447  Sum_probs=213.6

Q ss_pred             ceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHH
Q 009980           11 EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILV   90 (521)
Q Consensus        11 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   90 (521)
                      +|++.+.||+|+||.||+|.+..  +++.||+|.+......                          ......+.+|+.+
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~--~~~~~~ik~~~~~~~~--------------------------~~~~~~~~~e~~~   52 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLD--TGELMAVKEIRIQDND--------------------------PKTIKEIADEMKV   52 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECC--CCcEEEEEEEECcccc--------------------------hHHHHHHHHHHHH
Confidence            69999999999999999999887  7889999998653221                          1234568899999


Q ss_pred             HHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCC
Q 009980           91 MRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKP  170 (521)
Q Consensus        91 l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp  170 (521)
                      ++++     +||||+++++++...+.+++|+||+.+++|.+++...+.+++..+..++.|++.||.|||+.|++|+||+|
T Consensus        53 ~~~l-----~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~  127 (264)
T cd06626          53 LELL-----KHPNLVKYYGVEVHREKVYIFMEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKP  127 (264)
T ss_pred             HHhC-----CCCChhheeeeEecCCEEEEEEecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCH
Confidence            9999     99999999999999999999999999999999998877899999999999999999999999999999999


Q ss_pred             CcEEEeeCCCCCCEEEeecCCCccCCCCCCc-----ccccCCcccccccccccCC---CCchhhhHHHHHHHHHHHhCCC
Q 009980          171 ENCLFLNDREDSPLKIMDFGLSSVEGYTDPV-----VGLFGSIDYVSPEALLQDR---ITSKSDMWSLGVILYILLSGYP  242 (521)
Q Consensus       171 ~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~---~~~~~DiwslG~il~~ll~g~~  242 (521)
                      +||++   +.++.+||+|||++.........     ....+++.|+|||.+.+..   ++.++||||+|+++|++++|..
T Consensus       128 ~nil~---~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~  204 (264)
T cd06626         128 ANIFL---DHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKR  204 (264)
T ss_pred             HHEEE---CCCCCEEEcccccccccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCC
Confidence            99999   67889999999998765432221     1346788999999998766   7889999999999999999999


Q ss_pred             CCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcc
Q 009980          243 PFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV  302 (521)
Q Consensus       243 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~  302 (521)
                      ||.....................+.+..+++.+.++|.+||+.+|.+|||+.+++.|||+
T Consensus       205 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~  264 (264)
T cd06626         205 PWSELDNEFQIMFHVGAGHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV  264 (264)
T ss_pred             CccCCcchHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence            997654333222222222222223334569999999999999999999999999999996

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=4.1e-42  Score=330.78  Aligned_cols=264  Identities=24%  Similarity=0.403  Sum_probs=213.9

Q ss_pred             ceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHH
Q 009980           11 EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILV   90 (521)
Q Consensus        11 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   90 (521)
                      +|.+.+.||.|+||.||+|.++.  +++.||+|.+.........                  ...........+.+|+.+
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~--~~~~~a~K~~~~~~~~~~~------------------~~~~~~~~~~~~~~e~~~   61 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVT--TGEMMAVKQVELPATIAGR------------------HDSRQKDMVKALRSEIET   61 (272)
T ss_pred             ceeecceecccCceEEEEEeecC--CCceeeeeeeechhhhhcc------------------cchHHHHHHHHHHHHHHH
Confidence            58899999999999999999887  7889999998542211100                  000001112357789999


Q ss_pred             HHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCC
Q 009980           91 MRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKP  170 (521)
Q Consensus        91 l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp  170 (521)
                      ++++     +||||+++++++...+.+++||||+.|++|.+++...+.+++..+..++.|++.||.|||++|++||||+|
T Consensus        62 l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~  136 (272)
T cd06629          62 LKDL-----DHLNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKA  136 (272)
T ss_pred             HHhc-----CCCCcceEEEEeccCCceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCCh
Confidence            9998     99999999999999999999999999999999998888899999999999999999999999999999999


Q ss_pred             CcEEEeeCCCCCCEEEeecCCCccCCCCC---CcccccCCcccccccccccCC--CCchhhhHHHHHHHHHHHhCCCCCC
Q 009980          171 ENCLFLNDREDSPLKIMDFGLSSVEGYTD---PVVGLFGSIDYVSPEALLQDR--ITSKSDMWSLGVILYILLSGYPPFI  245 (521)
Q Consensus       171 ~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~--~~~~~DiwslG~il~~ll~g~~pf~  245 (521)
                      +||++   +.++.++|+|||++.......   ......|+..|+|||.+....  ++.++|+||+|+++|++++|..||.
T Consensus       137 ~nil~---~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~  213 (272)
T cd06629         137 DNLLV---DADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWS  213 (272)
T ss_pred             hhEEE---cCCCeEEEeeccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCc
Confidence            99999   678899999999987543211   122345889999999987654  7889999999999999999999997


Q ss_pred             CCCcHHHHHHHHcC--CCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcc
Q 009980          246 AQSNRQKQQMIMAG--EFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV  302 (521)
Q Consensus       246 ~~~~~~~~~~i~~~--~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~  302 (521)
                      .....+....+...  ...++......++..++++|.+||..+|++|||+.++|+|||+
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~  272 (272)
T cd06629         214 DEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQHPFI  272 (272)
T ss_pred             CcchHHHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence            65554444333322  2223333345679999999999999999999999999999996

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>PHA02988 hypothetical protein; Provisional

Probab=100.00  E-value=3.5e-42  Score=332.72  Aligned_cols=242  Identities=23%  Similarity=0.326  Sum_probs=205.7

Q ss_pred             ccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHHh
Q 009980           16 DILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIV   95 (521)
Q Consensus        16 ~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~   95 (521)
                      ..||+|++|.||+|..    +++.||||.+.+.....                         ......+.+|+.+++++ 
T Consensus        26 ~~i~~g~~~~v~~~~~----~~~~vavK~~~~~~~~~-------------------------~~~~~~~~~E~~~l~~l-   75 (283)
T PHA02988         26 VLIKENDQNSIYKGIF----NNKEVIIRTFKKFHKGH-------------------------KVLIDITENEIKNLRRI-   75 (283)
T ss_pred             eEEeeCCceEEEEEEE----CCEEEEEEecccccccc-------------------------HHHHHHHHHHHHHHHhc-
Confidence            5799999999999987    57789999986532211                         01124577999999999 


Q ss_pred             hccCCCCCccceeEEEEe----CCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeccCCC
Q 009980           96 ENVSPHPNVIDLYDVYED----QNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQA-NIVHRDLKP  170 (521)
Q Consensus        96 ~~~~~hpniv~~~~~~~~----~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~-~i~H~dlkp  170 (521)
                          +||||+++++++.+    ...+++||||++||+|.+++...+.+++.....++.|++.||.|||+. +++||||||
T Consensus        76 ----~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp  151 (283)
T PHA02988         76 ----DSNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTS  151 (283)
T ss_pred             ----CCCCEEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCCh
Confidence                99999999999877    457899999999999999999888899999999999999999999985 999999999


Q ss_pred             CcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCccccccccccc--CCCCchhhhHHHHHHHHHHHhCCCCCCCCC
Q 009980          171 ENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQ--DRITSKSDMWSLGVILYILLSGYPPFIAQS  248 (521)
Q Consensus       171 ~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~~ll~g~~pf~~~~  248 (521)
                      +||++   +.++.+||+|||+++.....  .....||+.|+|||++.+  ..++.++|||||||++|+|++|..||.+.+
T Consensus       152 ~nill---~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~  226 (283)
T PHA02988        152 VSFLV---TENYKLKIICHGLEKILSSP--PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLT  226 (283)
T ss_pred             hhEEE---CCCCcEEEcccchHhhhccc--cccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCC
Confidence            99999   77889999999998764322  233468999999999976  678999999999999999999999999888


Q ss_pred             cHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          249 NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       249 ~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      ..+....+......++.+  ..+|+.+++++.+||+.||++|||+.++++
T Consensus       227 ~~~~~~~i~~~~~~~~~~--~~~~~~l~~li~~cl~~dp~~Rps~~ell~  274 (283)
T PHA02988        227 TKEIYDLIINKNNSLKLP--LDCPLEIKCIVEACTSHDSIKRPNIKEILY  274 (283)
T ss_pred             HHHHHHHHHhcCCCCCCC--CcCcHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence            888877776554443322  357899999999999999999999999985

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=100.00  E-value=7.5e-42  Score=327.33  Aligned_cols=253  Identities=32%  Similarity=0.546  Sum_probs=216.8

Q ss_pred             ceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHH
Q 009980           11 EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILV   90 (521)
Q Consensus        11 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   90 (521)
                      +|++.+.||.|+||.||+|.+..  ++..||+|++.......                          .....+.+|+.+
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~--~~~~~~~k~~~~~~~~~--------------------------~~~~~~~~e~~~   52 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKS--DGKILVWKEIDYGNMTE--------------------------KEKQQLVSEVNI   52 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecC--CCCEEEEEEEecccCCH--------------------------HHHHHHHHHHHH
Confidence            58999999999999999999987  77899999986532211                          223457789999


Q ss_pred             HHHHhhccCCCCCccceeEEEEe--CCeEEEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH-----
Q 009980           91 MRKIVENVSPHPNVIDLYDVYED--QNGVHLILELCSGGELFDRIVA----QERYMEVGAAAVIRQIAEGLAALH-----  159 (521)
Q Consensus        91 l~~l~~~~~~hpniv~~~~~~~~--~~~~~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qil~al~~lH-----  159 (521)
                      ++++     +||||+++++++..  ....|++|||+++++|.+++..    ..++++..+..++.||+.||.|||     
T Consensus        53 l~~l-----~~~~i~~~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~  127 (265)
T cd08217          53 LREL-----KHPNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDP  127 (265)
T ss_pred             HHhc-----CCCccceeeeeeecCCCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccc
Confidence            9998     99999999998754  4568999999999999998865    367899999999999999999999     


Q ss_pred             HCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC-cccccCCcccccccccccCCCCchhhhHHHHHHHHHHH
Q 009980          160 QANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP-VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILL  238 (521)
Q Consensus       160 ~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll  238 (521)
                      +.+++|+||+|+||++   +.++.+||+|||++........ .....|++.|+|||.+.+..++.++|+||||+++|+|+
T Consensus       128 ~~~i~h~dl~p~nili---~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~  204 (265)
T cd08217         128 GNTVLHRDLKPANIFL---DANNNVKLGDFGLAKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELC  204 (265)
T ss_pred             cCcceecCCCHHHEEE---ecCCCEEEecccccccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHH
Confidence            8999999999999999   6778999999999987654332 33456899999999998888999999999999999999


Q ss_pred             hCCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcc
Q 009980          239 SGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV  302 (521)
Q Consensus       239 ~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~  302 (521)
                      +|..||...+.......+..+.....   ...++..+.+++.+||..+|.+|||+.++++|||+
T Consensus       205 ~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~  265 (265)
T cd08217         205 ALSPPFTARNQLQLASKIKEGKFRRI---PYRYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI  265 (265)
T ss_pred             HCCCcccCcCHHHHHHHHhcCCCCCC---ccccCHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence            99999998887777777766654322   24678999999999999999999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=100.00  E-value=2.4e-42  Score=331.00  Aligned_cols=256  Identities=26%  Similarity=0.419  Sum_probs=214.0

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ++|++.+.||.|+||.||+|.++.  +++.||+|.+......                           .....+.+|+.
T Consensus         1 ~~~~~~~~ig~g~~~~v~~~~~~~--~~~~~~ik~~~~~~~~---------------------------~~~~~~~~e~~   51 (265)
T cd06605           1 DDLEYLGELGAGNSGVVSKVLHRP--TGKIMAVKTIRLEINE---------------------------AIQKQILRELD   51 (265)
T ss_pred             CcchHHHHhcCCCCeEEEEEEEcC--CCcEEEEEEEecccCh---------------------------HHHHHHHHHHH
Confidence            478999999999999999999987  7889999998653211                           22345788999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH-CCCeecc
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQ-ANIVHRD  167 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~-~~i~H~d  167 (521)
                      +++++     .||||+++++++...+.+|+|+||+.|++|.+++... ..+++..+..++.|++.||.|||+ .|++|+|
T Consensus        52 ~l~~~-----~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~d  126 (265)
T cd06605          52 ILHKC-----NSPYIVGFYGAFYNNGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRD  126 (265)
T ss_pred             HHHHC-----CCCchhhhheeeecCCEEEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCC
Confidence            99988     8999999999999999999999999999999999876 789999999999999999999999 9999999


Q ss_pred             CCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 009980          168 LKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQ  247 (521)
Q Consensus       168 lkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~  247 (521)
                      |||+||++   +.++.++|+|||.+......... ...|++.|+|||.+.+..++.++|+||+|+++|+|++|..||...
T Consensus       127 l~~~ni~~---~~~~~~~l~d~g~~~~~~~~~~~-~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~  202 (265)
T cd06605         127 VKPSNILV---NSRGQIKLCDFGVSGQLVNSLAK-TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPE  202 (265)
T ss_pred             CCHHHEEE---CCCCCEEEeecccchhhHHHHhh-cccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCcc
Confidence            99999999   66788999999998754322211 256889999999999889999999999999999999999999654


Q ss_pred             C-----cHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCC
Q 009980          248 S-----NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGD  305 (521)
Q Consensus       248 ~-----~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~  305 (521)
                      .     ..+..+.+........  ....++.+++++|.+||..||.+|||+.+++.||||+..
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~~  263 (265)
T cd06605         203 NDPPDGIFELLQYIVNEPPPRL--PSGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIKKY  263 (265)
T ss_pred             ccccccHHHHHHHHhcCCCCCC--ChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhCchhhcc
Confidence            2     2223333333322111  112278999999999999999999999999999999754

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=100.00  E-value=3.9e-42  Score=330.09  Aligned_cols=261  Identities=24%  Similarity=0.404  Sum_probs=212.0

Q ss_pred             ceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHH
Q 009980           11 EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILV   90 (521)
Q Consensus        11 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   90 (521)
                      +|+..+.||+|+||.||+|.++.  +++.||+|++........                      ........+.+|+.+
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~--~~~~~alk~~~~~~~~~~----------------------~~~~~~~~~~~e~~~   56 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVK--TGTLMAVKQVTYVRNTSS----------------------EQEEVVEALRKEIRL   56 (268)
T ss_pred             CccccceecCcCceEEEEEEEcC--CCcEEEEEEeecccCCch----------------------hHHHHHHHHHHHHHH
Confidence            58899999999999999999887  788999999864322110                      001123457889999


Q ss_pred             HHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCC
Q 009980           91 MRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKP  170 (521)
Q Consensus        91 l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp  170 (521)
                      ++++     +||||+++++++.+.+.+++||||+.|++|.+++...+++++..+..++.||+.||.|||++|++|+||+|
T Consensus        57 l~~l-----~h~~iv~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~  131 (268)
T cd06630          57 MARL-----NHPHIIRMLGATCEDSHFNLFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKG  131 (268)
T ss_pred             HHHc-----CCCceehhhceeccCCeEEEEEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCH
Confidence            9998     99999999999999999999999999999999998888899999999999999999999999999999999


Q ss_pred             CcEEEeeCCCC-CCEEEeecCCCccCCCCC-----CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCC
Q 009980          171 ENCLFLNDRED-SPLKIMDFGLSSVEGYTD-----PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF  244 (521)
Q Consensus       171 ~Nil~~~~~~~-~~~kl~Dfg~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf  244 (521)
                      +||++   +.+ ..++|+|||.+.......     ......||..|+|||.+.+..++.++|+||+|+++|+|++|..||
T Consensus       132 ~nil~---~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~  208 (268)
T cd06630         132 ANLLI---DSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPW  208 (268)
T ss_pred             HHEEE---cCCCCEEEEcccccccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCC
Confidence            99999   444 469999999987643221     112346888999999998888999999999999999999999999


Q ss_pred             CCCCcHHHHHHHHcC-CCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCccc
Q 009980          245 IAQSNRQKQQMIMAG-EFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVI  303 (521)
Q Consensus       245 ~~~~~~~~~~~i~~~-~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~  303 (521)
                      ...........+... ...........+++++.+++.+||..+|.+|||+.++++||||.
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~  268 (268)
T cd06630         209 NAEKHSNHLALIFKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR  268 (268)
T ss_pred             CCCCCcchHHHHHHHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence            755433222222111 11111222245789999999999999999999999999999984

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=100.00  E-value=4.9e-42  Score=333.07  Aligned_cols=257  Identities=28%  Similarity=0.432  Sum_probs=212.0

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ++|++.+.||+|+||.||+|.++.  +++.||+|.++......                          .....+.+|+.
T Consensus         1 ~~y~~~~~i~~g~~~~v~~~~~~~--~~~~v~vK~~~~~~~~~--------------------------~~~~~~~~e~~   52 (288)
T cd07833           1 NKYEVLGVVGEGAYGVVLKCRNKA--TGEIVAIKKFKESEDDE--------------------------DVKKTALREVK   52 (288)
T ss_pred             CceeEEEEecccCCeeEEEEEeCC--CCcEEEEehhhhhcccc--------------------------cchhHHHHHHH
Confidence            479999999999999999999987  78899999986432211                          12345789999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCC
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLK  169 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlk  169 (521)
                      +++++     .||||+++++++..++..|+||||+.++.+..+..+...+++..+..++.||+.||.|||++|++|+||+
T Consensus        53 ~l~~l-----~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~  127 (288)
T cd07833          53 VLRQL-----RHENIVNLKEAFRRKGRLYLVFEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIK  127 (288)
T ss_pred             HHHhc-----CCCCeeehhheEEECCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence            99999     8999999999999999999999999987777666666779999999999999999999999999999999


Q ss_pred             CCcEEEeeCCCCCCEEEeecCCCccCCCCC--CcccccCCcccccccccccC-CCCchhhhHHHHHHHHHHHhCCCCCCC
Q 009980          170 PENCLFLNDREDSPLKIMDFGLSSVEGYTD--PVVGLFGSIDYVSPEALLQD-RITSKSDMWSLGVILYILLSGYPPFIA  246 (521)
Q Consensus       170 p~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~  246 (521)
                      |+||++   +.++.+||+|||++.......  ......+++.|+|||++.+. .++.++|+||+|+++|+|++|.+||.+
T Consensus       128 ~~ni~~---~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~  204 (288)
T cd07833         128 PENILV---SESGVLKLCDFGFARALRARPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPG  204 (288)
T ss_pred             HHHeEE---CCCCCEEEEeeecccccCCCccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            999999   678899999999987654433  23345688999999999887 789999999999999999999999987


Q ss_pred             CCcHHHHHHHHcCCCCCc---------------------------h-hhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          247 QSNRQKQQMIMAGEFSFY---------------------------E-QTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       247 ~~~~~~~~~i~~~~~~~~---------------------------~-~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      .+..+....+.......+                           . .....+|.++++||.+||..+|++|||++++++
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  284 (288)
T cd07833         205 DSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ  284 (288)
T ss_pred             CCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence            655443333221100000                           0 011234889999999999999999999999999


Q ss_pred             CCcc
Q 009980          299 HPWV  302 (521)
Q Consensus       299 h~~~  302 (521)
                      ||||
T Consensus       285 ~~~f  288 (288)
T cd07833         285 HPYF  288 (288)
T ss_pred             CCCC
Confidence            9997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=100.00  E-value=5.8e-42  Score=333.44  Aligned_cols=257  Identities=30%  Similarity=0.450  Sum_probs=210.1

Q ss_pred             ccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEI   88 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   88 (521)
                      .++|++.+.||.|+||.||+|.++.  +++.+|+|.++......                          .....+.+|+
T Consensus         4 ~~~y~~~~~lg~g~~~~v~~~~~~~--~~~~~~ik~~~~~~~~~--------------------------~~~~~~~~e~   55 (293)
T cd07843           4 VDEYEKLNRIEEGTYGVVYRARDKK--TGEIVALKKLKMEKEKE--------------------------GFPITSLREI   55 (293)
T ss_pred             hhhhhhhhhhcCCCCeEEEEEEECC--CCcEEEEEEEeeccccc--------------------------cchhhHHHHH
Confidence            4689999999999999999999987  78899999987533211                          1122356899


Q ss_pred             HHHHHHhhccCCCCCccceeEEEEeC--CeEEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           89 LVMRKIVENVSPHPNVIDLYDVYEDQ--NGVHLILELCSGGELFDRIVAQE-RYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        89 ~~l~~l~~~~~~hpniv~~~~~~~~~--~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      .+++++     +||||+++++++...  +..|+||||+.+ +|.+.+.... .+++..+..++.||+.||.|||++|++|
T Consensus        56 ~~l~~l-----~h~ni~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H  129 (293)
T cd07843          56 NILLKL-----QHPNIVTVKEVVVGSNLDKIYMVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILH  129 (293)
T ss_pred             HHHHhc-----CCCCEEEEEEEEEecCCCcEEEEehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence            999998     899999999999887  899999999975 8988887643 5899999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCCCC-CCcccccCCcccccccccccC-CCCchhhhHHHHHHHHHHHhCCCC
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGYT-DPVVGLFGSIDYVSPEALLQD-RITSKSDMWSLGVILYILLSGYPP  243 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~~ll~g~~p  243 (521)
                      +||||+||++   +.++.++|+|||++...... .......+++.|+|||.+.+. .++.++|+||+|+++|+|++|.+|
T Consensus       130 ~dl~p~nili---~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~  206 (293)
T cd07843         130 RDLKTSNLLL---NNRGILKICDFGLAREYGSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPL  206 (293)
T ss_pred             ccCCHHHEEE---CCCCcEEEeecCceeeccCCccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCC
Confidence            9999999999   77789999999998865433 223345678999999998754 468899999999999999999999


Q ss_pred             CCCCCcHHHHHHHHcCCCCCch--------------------------hhhhc--cCHHHHHHHHHhccCCCCCCCCHHH
Q 009980          244 FIAQSNRQKQQMIMAGEFSFYE--------------------------QTWKN--ISSSAKQLISSLLTVDPNRRPSAQE  295 (521)
Q Consensus       244 f~~~~~~~~~~~i~~~~~~~~~--------------------------~~~~~--~s~~~~~li~~~l~~dp~~R~t~~~  295 (521)
                      |...+.......+.........                          ..++.  +++.++++|.+||+.+|++|||+.+
T Consensus       207 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~e  286 (293)
T cd07843         207 FPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAED  286 (293)
T ss_pred             CCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHH
Confidence            9887766555544332111100                          11122  4888999999999999999999999


Q ss_pred             HHcCCcc
Q 009980          296 LLNHPWV  302 (521)
Q Consensus       296 ~l~h~~~  302 (521)
                      +|.||||
T Consensus       287 ll~~~~f  293 (293)
T cd07843         287 ALKHPYF  293 (293)
T ss_pred             HhcCCCC
Confidence            9999997

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=100.00  E-value=1e-41  Score=326.71  Aligned_cols=258  Identities=24%  Similarity=0.377  Sum_probs=211.5

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      .+|++.+.||+|+||.||.|.++.  +++.||||.+........                       .......+.+|+.
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~--~~~~v~ik~~~~~~~~~~-----------------------~~~~~~~~~~E~~   56 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDAD--TGRELAVKQVQFDPESPE-----------------------TSKEVNALECEIQ   56 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcC--CCcEEEEEEeecCcCCcc-----------------------cHHHHHHHHHHHH
Confidence            579999999999999999999987  788999999864221110                       0012245788999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeC--CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecc
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQ--NGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRD  167 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~--~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~d  167 (521)
                      +++++     .||||+++++++.+.  ..+|+||||++|++|.+++...+.+++..+..++.|++.||.|||++|++|+|
T Consensus        57 ~l~~l-----~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~d  131 (265)
T cd06652          57 LLKNL-----LHERIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRD  131 (265)
T ss_pred             HHHhc-----CCCCeeeEEeEeccCCCceEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCC
Confidence            99998     999999999998764  56889999999999999998878899999999999999999999999999999


Q ss_pred             CCCCcEEEeeCCCCCCEEEeecCCCccCCCC----CCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCC
Q 009980          168 LKPENCLFLNDREDSPLKIMDFGLSSVEGYT----DPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPP  243 (521)
Q Consensus       168 lkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~p  243 (521)
                      |||+||++   +.++.++|+|||++......    .......|+..|+|||.+.+..++.++|+|||||++|+|++|+.|
T Consensus       132 l~p~nil~---~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p  208 (265)
T cd06652         132 IKGANILR---DSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPP  208 (265)
T ss_pred             CCHHHEEe---cCCCCEEECcCccccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCC
Confidence            99999999   67788999999998754321    112234688999999999888899999999999999999999999


Q ss_pred             CCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCccc
Q 009980          244 FIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVI  303 (521)
Q Consensus       244 f~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~  303 (521)
                      |...........+......  ...+..++..+.++|.+|+. +|.+|||++++++|||+.
T Consensus       209 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~~~~  265 (265)
T cd06652         209 WAEFEAMAAIFKIATQPTN--PVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRHTFVH  265 (265)
T ss_pred             CCccchHHHHHHHhcCCCC--CCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCcccC
Confidence            9876555444444332211  11224578899999999994 999999999999999973

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=100.00  E-value=9.5e-42  Score=332.29  Aligned_cols=258  Identities=25%  Similarity=0.345  Sum_probs=206.2

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ++|++.+.||+|+||.||+|.+..  +++.||||.+.......                          .....+.+|+.
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~--~~~~v~lK~~~~~~~~~--------------------------~~~~~~~~E~~   52 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKN--TGKLVALKKTRLEMDEE--------------------------GIPPTALREIS   52 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECC--CCcEEEEEeehhhcccc--------------------------CCchHHHHHHH
Confidence            579999999999999999999987  78899999976432111                          11234678999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCe-----EEEEEeccCCCchHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNG-----VHLILELCSGGELFDRIVAQ-----ERYMEVGAAAVIRQIAEGLAALH  159 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~-----~~lv~e~~~gg~L~~~l~~~-----~~~~~~~~~~i~~qil~al~~lH  159 (521)
                      +++++    .+||||+++++++...+.     .|+||||+.+ +|.+++...     ..+++..+..++.||+.||.|||
T Consensus        53 ~l~~l----~~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH  127 (295)
T cd07837          53 LLQML----SESIYIVRLLDVEHVEEKNGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCH  127 (295)
T ss_pred             HHHHc----cCCCCccceeeeEeecCCCCCceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            99887    357999999999987665     8999999986 788887643     35799999999999999999999


Q ss_pred             HCCCeeccCCCCcEEEeeCCC-CCCEEEeecCCCccCCCC-CCcccccCCccccccccccc-CCCCchhhhHHHHHHHHH
Q 009980          160 QANIVHRDLKPENCLFLNDRE-DSPLKIMDFGLSSVEGYT-DPVVGLFGSIDYVSPEALLQ-DRITSKSDMWSLGVILYI  236 (521)
Q Consensus       160 ~~~i~H~dlkp~Nil~~~~~~-~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~  236 (521)
                      ++||+||||+|+||++   +. ++.+||+|||++...... .......+++.|+|||.+.+ ..++.++|+||+|+++|+
T Consensus       128 ~~~i~H~dl~~~nil~---~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~  204 (295)
T cd07837         128 KHGVMHRDLKPQNLLV---DKQKGLLKIADLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAE  204 (295)
T ss_pred             HCCeeecCCChHHEEE---ecCCCeEEEeecccceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHH
Confidence            9999999999999999   44 788999999998754322 12223357889999998865 457899999999999999


Q ss_pred             HHhCCCCCCCCCcHHHHHHHHcCCCCCc------------------------hhhhhccCHHHHHHHHHhccCCCCCCCC
Q 009980          237 LLSGYPPFIAQSNRQKQQMIMAGEFSFY------------------------EQTWKNISSSAKQLISSLLTVDPNRRPS  292 (521)
Q Consensus       237 ll~g~~pf~~~~~~~~~~~i~~~~~~~~------------------------~~~~~~~s~~~~~li~~~l~~dp~~R~t  292 (521)
                      |++|.+||.+.+.......+........                        ....+.+++.+.+||.+||..||.+|||
T Consensus       205 l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~  284 (295)
T cd07837         205 MSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRIS  284 (295)
T ss_pred             HHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCC
Confidence            9999999988766555444332111000                        0112357899999999999999999999


Q ss_pred             HHHHHcCCccc
Q 009980          293 AQELLNHPWVI  303 (521)
Q Consensus       293 ~~~~l~h~~~~  303 (521)
                      +.+++.||||.
T Consensus       285 ~~eil~~~~~~  295 (295)
T cd07837         285 AKAALTHPYFD  295 (295)
T ss_pred             HHHHhcCCCcC
Confidence            99999999984

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=100.00  E-value=1.5e-41  Score=330.16  Aligned_cols=260  Identities=27%  Similarity=0.437  Sum_probs=211.6

Q ss_pred             ccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHH
Q 009980            5 TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALL   84 (521)
Q Consensus         5 ~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (521)
                      .....++|++.+.||+|+||.||+|.++.  +++.+|+|++....                             .....+
T Consensus        17 ~~~~~~~y~~~~~l~~g~~~~vy~~~~~~--~~~~~aik~~~~~~-----------------------------~~~~~~   65 (291)
T cd06639          17 LGDPTDTWEIIETIGKGTYGKVYKVTNKK--DGSLAAVKILDPIS-----------------------------DVDEEI   65 (291)
T ss_pred             CCCCCCCeEEEEEeecCCCeEEEEEEECC--CCCEEEEEEecccc-----------------------------cHHHHH
Confidence            34567899999999999999999999987  78899999985321                             113446


Q ss_pred             HHHHHHHHHHhhccCCCCCccceeEEEEeC-----CeEEEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHH
Q 009980           85 TNEILVMRKIVENVSPHPNVIDLYDVYEDQ-----NGVHLILELCSGGELFDRIVA----QERYMEVGAAAVIRQIAEGL  155 (521)
Q Consensus        85 ~~E~~~l~~l~~~~~~hpniv~~~~~~~~~-----~~~~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qil~al  155 (521)
                      .+|+.+++++    .+||||+++++++...     +.+|+||||+.|++|.+++..    ...+++..++.++.|++.||
T Consensus        66 ~~e~~~l~~l----~~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al  141 (291)
T cd06639          66 EAEYNILQSL----PNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGL  141 (291)
T ss_pred             HHHHHHHHHh----cCCCCeEEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHH
Confidence            7788888876    4799999999998654     368999999999999988753    45789999999999999999


Q ss_pred             HHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC-CcccccCCcccccccccccC-----CCCchhhhHH
Q 009980          156 AALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALLQD-----RITSKSDMWS  229 (521)
Q Consensus       156 ~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~-----~~~~~~Diws  229 (521)
                      .|||+.|++||||||+||++   +.++.++|+|||++....... ......|++.|+|||.+...     .++.++||||
T Consensus       142 ~~lH~~~ivH~dlkp~nili---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~s  218 (291)
T cd06639         142 QHLHNNRIIHRDVKGNNILL---TTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWS  218 (291)
T ss_pred             HHHHhCCeeccCCCHHHEEE---cCCCCEEEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHH
Confidence            99999999999999999999   667889999999987643222 12234688999999998643     3678999999


Q ss_pred             HHHHHHHHHhCCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCccc
Q 009980          230 LGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVI  303 (521)
Q Consensus       230 lG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~  303 (521)
                      +||++|+|++|++||...........+..+..... .....++..++++|.+||..+|++|||+.++++||||+
T Consensus       219 lGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~  291 (291)
T cd06639         219 LGITAIELGDGDPPLFDMHPVKTLFKIPRNPPPTL-LHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK  291 (291)
T ss_pred             HHHHHHHHhhCCCCCCCCcHHHHHHHHhcCCCCCC-CcccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence            99999999999999987766555555544432211 11234678899999999999999999999999999984

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=100.00  E-value=1e-41  Score=325.16  Aligned_cols=257  Identities=28%  Similarity=0.425  Sum_probs=215.2

Q ss_pred             ceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHH
Q 009980           11 EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILV   90 (521)
Q Consensus        11 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   90 (521)
                      +|+..+.||+|++|.||+|..+.  +++.||+|.+........                       .......+.+|+.+
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~~--~~~~~~ik~~~~~~~~~~-----------------------~~~~~~~~~~e~~~   55 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNLD--DGDFFAVKEVSLADDGQT-----------------------GQEAVKQLEQEIAL   55 (258)
T ss_pred             CccccceeeecCCceEEEEEEcC--CCcEEEEEEEEEcccccc-----------------------chHHHHHHHHHHHH
Confidence            58889999999999999999987  678999999865332110                       00123457889999


Q ss_pred             HHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCC
Q 009980           91 MRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKP  170 (521)
Q Consensus        91 l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp  170 (521)
                      ++++     +||||+++++++.+...+|+||||++|++|.+++...+.+++..+..++.||+.||.|||+.|++|+||+|
T Consensus        56 l~~~-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~  130 (258)
T cd06632          56 LSKL-----QHPNIVQYLGTEREEDNLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKG  130 (258)
T ss_pred             HHhc-----CCCCchheeeeEecCCeEEEEEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCH
Confidence            9998     99999999999999999999999999999999998888899999999999999999999999999999999


Q ss_pred             CcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCC-CCchhhhHHHHHHHHHHHhCCCCCCCCCc
Q 009980          171 ENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDR-ITSKSDMWSLGVILYILLSGYPPFIAQSN  249 (521)
Q Consensus       171 ~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~~ll~g~~pf~~~~~  249 (521)
                      +||++   +.++.+||+|||++.............|++.|+|||.+.... ++.++|+||+|+++|+|++|.+||.....
T Consensus       131 ~ni~~---~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~  207 (258)
T cd06632         131 ANILV---DTNGVVKLADFGMAKQVVEFSFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEG  207 (258)
T ss_pred             HHEEE---CCCCCEEEccCccceeccccccccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcH
Confidence            99999   677899999999987654333334556899999999987766 89999999999999999999999977664


Q ss_pred             HHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcc
Q 009980          250 RQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV  302 (521)
Q Consensus       250 ~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~  302 (521)
                      ......+.....  ....+..+++.+++++.+||..+|.+|||+.+++.|||+
T Consensus       208 ~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~  258 (258)
T cd06632         208 VAAVFKIGRSKE--LPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV  258 (258)
T ss_pred             HHHHHHHHhccc--CCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence            444444333111  112235678999999999999999999999999999996

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=100.00  E-value=5.7e-42  Score=331.62  Aligned_cols=256  Identities=26%  Similarity=0.439  Sum_probs=209.0

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      ...+.|++.+.||.|+||.||+|.++.  +++.||+|++....                             .....+..
T Consensus        13 ~~~~~~~~~~~lg~g~~~~v~~~~~~~--~~~~~a~K~~~~~~-----------------------------~~~~~~~~   61 (282)
T cd06636          13 DPAGIFELVEVVGNGTYGQVYKGRHVK--TGQLAAIKVMDVTE-----------------------------DEEEEIKL   61 (282)
T ss_pred             ChhhhhhhheeeccCCCeEEEEEEEcC--CCcEEEEEEEecCh-----------------------------HHHHHHHH
Confidence            456799999999999999999999987  78899999985421                             11234677


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEe------CCeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHH
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYED------QNGVHLILELCSGGELFDRIVAQ--ERYMEVGAAAVIRQIAEGLAAL  158 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~------~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~al~~l  158 (521)
                      |+.++.++    .+||||+++++++..      .+.+|++|||+.+|+|.+++...  ..+++..+..++.||+.||.||
T Consensus        62 e~~~l~~~----~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~L  137 (282)
T cd06636          62 EINMLKKY----SHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHL  137 (282)
T ss_pred             HHHHHHHh----cCCCcEEEEeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHH
Confidence            88888877    379999999999853      46789999999999999988753  4588899999999999999999


Q ss_pred             HHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCC-CCcccccCCcccccccccc-----cCCCCchhhhHHHHH
Q 009980          159 HQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYT-DPVVGLFGSIDYVSPEALL-----QDRITSKSDMWSLGV  232 (521)
Q Consensus       159 H~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslG~  232 (521)
                      |+.||+|+||+|+||++   +.++.++|+|||++...... .......|++.|+|||.+.     ...++.++|+|||||
T Consensus       138 H~~~ivH~dl~~~nili---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~  214 (282)
T cd06636         138 HAHKVIHRDIKGQNVLL---TENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGI  214 (282)
T ss_pred             HHCCcccCCCCHHHEEE---CCCCCEEEeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHH
Confidence            99999999999999999   67788999999998754322 1223456899999999986     346788999999999


Q ss_pred             HHHHHHhCCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcc
Q 009980          233 ILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV  302 (521)
Q Consensus       233 il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~  302 (521)
                      ++|+|++|.+||...........+.....  +......+|.++.+||.+||..||.+|||+.++++||||
T Consensus       215 ~l~el~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~  282 (282)
T cd06636         215 TAIEMAEGAPPLCDMHPMRALFLIPRNPP--PKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI  282 (282)
T ss_pred             HHHHHHhCCCCccccCHHhhhhhHhhCCC--CCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence            99999999999977655444433333221  111224578999999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-43  Score=334.68  Aligned_cols=259  Identities=29%  Similarity=0.478  Sum_probs=226.4

Q ss_pred             ccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEI   88 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   88 (521)
                      .+.|..-++||+|+||.||-++.+.  +|+-||+|.+.+......                         ..+....+|-
T Consensus       184 ~n~F~~~RvlGkGGFGEV~acqvra--TGKMYAcKkL~KKRiKkr-------------------------~ge~maLnEk  236 (591)
T KOG0986|consen  184 KNTFRVYRVLGKGGFGEVCACQVRA--TGKMYACKKLDKKRIKKR-------------------------KGETMALNEK  236 (591)
T ss_pred             ccceeeeEEEecccccceeEEEEec--chhhHHHHHHHHHHHHHh-------------------------hhhHHhhHHH
Confidence            4567778899999999999999998  899999999876543321                         2345677899


Q ss_pred             HHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 009980           89 LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE--RYMEVGAAAVIRQIAEGLAALHQANIVHR  166 (521)
Q Consensus        89 ~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~al~~lH~~~i~H~  166 (521)
                      .+|.++     +.|.||.+-..|++.+.+++||..|.||+|.-+|.+.+  .|+|..+..++.+|+.||.+||..+||.|
T Consensus       237 ~iL~kV-----~s~FiVslaYAfeTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYR  311 (591)
T KOG0986|consen  237 QILEKV-----SSPFIVSLAYAFETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYR  311 (591)
T ss_pred             HHHHHh-----ccCcEEEEeeeecCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeec
Confidence            999999     89999999999999999999999999999988887655  79999999999999999999999999999


Q ss_pred             cCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCC
Q 009980          167 DLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIA  246 (521)
Q Consensus       167 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~  246 (521)
                      |+||+|||+   +..|.++|+|+|+|.......+..+.+||.+|||||++.+..|+...|.|||||++|+|+.|+.||..
T Consensus       312 DLKPeNILL---Dd~GhvRISDLGLAvei~~g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~  388 (591)
T KOG0986|consen  312 DLKPENILL---DDHGHVRISDLGLAVEIPEGKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQ  388 (591)
T ss_pred             cCChhheee---ccCCCeEeeccceEEecCCCCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhh
Confidence            999999999   89999999999999998888888888999999999999999999999999999999999999999977


Q ss_pred             CCcH----HHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCC-----HHHHHcCCcccCCC
Q 009980          247 QSNR----QKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPS-----AQELLNHPWVIGDS  306 (521)
Q Consensus       247 ~~~~----~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t-----~~~~l~h~~~~~~~  306 (521)
                      ....    ++-+.+......+    ....|++++++.+.+|.+||.+|..     +.++.+||||+.-+
T Consensus       389 ~KeKvk~eEvdrr~~~~~~ey----~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~ln  453 (591)
T KOG0986|consen  389 RKEKVKREEVDRRTLEDPEEY----SDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLN  453 (591)
T ss_pred             hhhhhhHHHHHHHHhcchhhc----ccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccCC
Confidence            6543    3334444444333    3678999999999999999999964     67999999998643

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=100.00  E-value=8.6e-42  Score=330.68  Aligned_cols=255  Identities=27%  Similarity=0.415  Sum_probs=207.2

Q ss_pred             ceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHH
Q 009980           11 EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILV   90 (521)
Q Consensus        11 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   90 (521)
                      +|++.+.||.|++|.||+|+++.  +++.||||.+.......                          .....+.+|+.+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~--~~~~~~ik~~~~~~~~~--------------------------~~~~~~~~E~~~   52 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKL--TGEVVALKKIRLDTETE--------------------------GVPSTAIREISL   52 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECC--CCCEEEEEEcccccccc--------------------------ccchHHHHHHHH
Confidence            48999999999999999999987  78899999986432111                          112457889999


Q ss_pred             HHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 009980           91 MRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA--QERYMEVGAAAVIRQIAEGLAALHQANIVHRDL  168 (521)
Q Consensus        91 l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~--~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dl  168 (521)
                      ++++     +||||+++++++.+.+..|+||||+. ++|.+++..  ...+++..+..++.|++.||+|||++|++|+||
T Consensus        53 l~~l-----~h~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l  126 (284)
T cd07860          53 LKEL-----NHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL  126 (284)
T ss_pred             HHhc-----CCCCCcchhhhcccCCcEEEEeeccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence            9999     99999999999999999999999996 588888765  356899999999999999999999999999999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCccCCCCC-CcccccCCcccccccccccCC-CCchhhhHHHHHHHHHHHhCCCCCCC
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALLQDR-ITSKSDMWSLGVILYILLSGYPPFIA  246 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~~ll~g~~pf~~  246 (521)
                      +|+||++   +.++.++|+|||++....... ......+++.|+|||.+.+.. ++.++||||+|+++|+|+||+.||.+
T Consensus       127 ~p~nill---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~  203 (284)
T cd07860         127 KPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG  203 (284)
T ss_pred             CHHHEEE---CCCCCEEEeeccchhhcccCccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence            9999999   777889999999987543222 223335788999999887644 58899999999999999999999987


Q ss_pred             CCcHHHHHHHHcCCCCC-------------------------chhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCc
Q 009980          247 QSNRQKQQMIMAGEFSF-------------------------YEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPW  301 (521)
Q Consensus       247 ~~~~~~~~~i~~~~~~~-------------------------~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~  301 (521)
                      .+.......+.......                         .....+.++++++++|.+||..||.+|||+.++++|||
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~  283 (284)
T cd07860         204 DSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPF  283 (284)
T ss_pred             CCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCC
Confidence            76544433332211100                         01112347889999999999999999999999999999


Q ss_pred             c
Q 009980          302 V  302 (521)
Q Consensus       302 ~  302 (521)
                      |
T Consensus       284 f  284 (284)
T cd07860         284 F  284 (284)
T ss_pred             C
Confidence            7

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=100.00  E-value=4.4e-42  Score=333.08  Aligned_cols=257  Identities=25%  Similarity=0.429  Sum_probs=210.7

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ++|++.+.||+|+||.||+|.++.  +++.||+|.+.+.....                          .....+.+|+.
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~--~~~~~~iK~~~~~~~~~--------------------------~~~~~~~~e~~   52 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHKE--TGQIVAIKKFLESEDDK--------------------------MVKKIAMREIR   52 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEECC--CCCEEEEEeHhhccCcc--------------------------hhhHHHHHHHH
Confidence            579999999999999999999987  78899999986432211                          12344778999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCC
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLK  169 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlk  169 (521)
                      +++.+     +||||+++++++.+++..|+||||+.+++|.++......+++..+..++.||+.||.|||+.|++|+||+
T Consensus        53 ~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~  127 (286)
T cd07846          53 MLKQL-----RHENLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIK  127 (286)
T ss_pred             HHHhc-----CCcchhhHHHhcccCCeEEEEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCC
Confidence            99998     9999999999999999999999999999888877766679999999999999999999999999999999


Q ss_pred             CCcEEEeeCCCCCCEEEeecCCCccCCCCC-CcccccCCccccccccccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 009980          170 PENCLFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALLQ-DRITSKSDMWSLGVILYILLSGYPPFIAQ  247 (521)
Q Consensus       170 p~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~  247 (521)
                      |+||++   +.++.++|+|||++....... ......+++.|+|||.+.+ ..++.++||||+|+++|+|++|.+||...
T Consensus       128 p~ni~~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~  204 (286)
T cd07846         128 PENILV---SQSGVVKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGD  204 (286)
T ss_pred             HHHEEE---CCCCcEEEEeeeeeeeccCCccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCC
Confidence            999999   778899999999987643322 2233468889999999865 34688999999999999999999999776


Q ss_pred             CcHHHHHHHHcCCCC-------------------C--------chhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCC
Q 009980          248 SNRQKQQMIMAGEFS-------------------F--------YEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHP  300 (521)
Q Consensus       248 ~~~~~~~~i~~~~~~-------------------~--------~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~  300 (521)
                      +..+....+......                   .        ....++.++..+++|+.+||..+|++|||+.+++.||
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~  284 (286)
T cd07846         205 SDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHE  284 (286)
T ss_pred             chHHHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCC
Confidence            654433332211000                   0        0112346789999999999999999999999999999


Q ss_pred             cc
Q 009980          301 WV  302 (521)
Q Consensus       301 ~~  302 (521)
                      ||
T Consensus       285 ~~  286 (286)
T cd07846         285 FF  286 (286)
T ss_pred             CC
Confidence            97

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.1e-41  Score=328.62  Aligned_cols=262  Identities=23%  Similarity=0.434  Sum_probs=213.7

Q ss_pred             ceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHH
Q 009980           11 EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILV   90 (521)
Q Consensus        11 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   90 (521)
                      .|++.+.||.|+||.||+|.+..  +++.||+|.+......                           .....+.+|+.+
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~--~~~~~~iK~~~~~~~~---------------------------~~~~~~~~e~~~   52 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVP--TGRVVALKIINLDTPD---------------------------DDVSDIQREVAL   52 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcC--CCcEEEEEEecCCCCc---------------------------hhHHHHHHHHHH
Confidence            58899999999999999999987  7889999998642211                           123457789999


Q ss_pred             HHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCC
Q 009980           91 MRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKP  170 (521)
Q Consensus        91 l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp  170 (521)
                      ++++..  ..|||++++++++.....+|+||||+.|++|.+++.. +.+++..+..++.|++.||.|||+.||+|+||+|
T Consensus        53 l~~l~~--~~~~~vi~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p  129 (277)
T cd06917          53 LSQLRQ--SQPPNITKYYGSYLKGPRLWIIMEYAEGGSVRTLMKA-GPIAEKYISVIIREVLVALKYIHKVGVIHRDIKA  129 (277)
T ss_pred             HHHhcc--CCCCCeeeEeeeeeeCCEEEEEEecCCCCcHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCH
Confidence            988811  1499999999999999999999999999999998865 4789999999999999999999999999999999


Q ss_pred             CcEEEeeCCCCCCEEEeecCCCccCCCCC-CcccccCCccccccccccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCC
Q 009980          171 ENCLFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALLQ-DRITSKSDMWSLGVILYILLSGYPPFIAQS  248 (521)
Q Consensus       171 ~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~  248 (521)
                      +||++   +..+.++|+|||++....... ......|++.|+|||.+.+ ..++.++|+||+|+++|+|++|.+||.+..
T Consensus       130 ~ni~i---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~  206 (277)
T cd06917         130 ANILV---TNTGNVKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVD  206 (277)
T ss_pred             HHEEE---cCCCCEEEccCCceeecCCCccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCC
Confidence            99999   668889999999987654332 2233468999999998865 356889999999999999999999998766


Q ss_pred             cHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCCCcc
Q 009980          249 NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAKE  309 (521)
Q Consensus       249 ~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~~~~  309 (521)
                      .......+....  .+......++.++.+++.+||..||++|||+.+++.|||+.......
T Consensus       207 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~~~~~~  265 (277)
T cd06917         207 AFRAMMLIPKSK--PPRLEDNGYSKLLREFVAACLDEEPKERLSAEELLKSKWIKAHSKTP  265 (277)
T ss_pred             hhhhhhccccCC--CCCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhccccCc
Confidence            544433332221  11111223788999999999999999999999999999998765443

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=100.00  E-value=1.5e-41  Score=330.19  Aligned_cols=256  Identities=25%  Similarity=0.414  Sum_probs=204.6

Q ss_pred             ccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEI   88 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   88 (521)
                      .++|++.+.||.|++|.||+|.++.  +++.||||.+.......                           ....+.+|+
T Consensus         4 ~~~y~~~~~lg~g~~~~vy~~~~~~--~~~~~~iK~~~~~~~~~---------------------------~~~~~~~E~   54 (291)
T cd07844           4 LETYKKLDKLGEGSYATVYKGRSKL--TGQLVALKEIRLEHEEG---------------------------APFTAIREA   54 (291)
T ss_pred             ccceeEEEEEeecCCeEEEEEEEcC--CCcEEEEEEEecccccC---------------------------CchhHHHHH
Confidence            4789999999999999999999987  77899999986532111                           012356899


Q ss_pred             HHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecc
Q 009980           89 LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQANIVHRD  167 (521)
Q Consensus        89 ~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~~~i~H~d  167 (521)
                      .+++++     +||||+++++++.+.+..|+||||+.+ +|.+++... ..+++..++.++.|++.||.|||++||+|||
T Consensus        55 ~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~d  128 (291)
T cd07844          55 SLLKDL-----KHANIVTLHDIIHTKKTLTLVFEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRD  128 (291)
T ss_pred             HHHhhC-----CCcceeeEEEEEecCCeEEEEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccc
Confidence            999999     999999999999999999999999975 898888654 4689999999999999999999999999999


Q ss_pred             CCCCcEEEeeCCCCCCEEEeecCCCccCCCC-CCcccccCCccccccccccc-CCCCchhhhHHHHHHHHHHHhCCCCCC
Q 009980          168 LKPENCLFLNDREDSPLKIMDFGLSSVEGYT-DPVVGLFGSIDYVSPEALLQ-DRITSKSDMWSLGVILYILLSGYPPFI  245 (521)
Q Consensus       168 lkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~ll~g~~pf~  245 (521)
                      |||+||++   +.++.+||+|||+++..... .......+++.|+|||.+.+ ..++.++||||+|+++|+|++|.+||.
T Consensus       129 l~p~nil~---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~  205 (291)
T cd07844         129 LKPQNLLI---SERGELKLADFGLARAKSVPSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFP  205 (291)
T ss_pred             CCHHHEEE---cCCCCEEECccccccccCCCCccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCC
Confidence            99999999   77788999999998754321 11222356888999998865 457899999999999999999999997


Q ss_pred             CCCc-HHHHHHHHcCCCCC--------------------------chhhhhccC--HHHHHHHHHhccCCCCCCCCHHHH
Q 009980          246 AQSN-RQKQQMIMAGEFSF--------------------------YEQTWKNIS--SSAKQLISSLLTVDPNRRPSAQEL  296 (521)
Q Consensus       246 ~~~~-~~~~~~i~~~~~~~--------------------------~~~~~~~~s--~~~~~li~~~l~~dp~~R~t~~~~  296 (521)
                      +... .+....+.......                          .......++  .++.+++.+||..+|.+|||+.++
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~  285 (291)
T cd07844         206 GSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEA  285 (291)
T ss_pred             CCccHHHHHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHH
Confidence            6652 22222221100000                          001112344  888999999999999999999999


Q ss_pred             HcCCcc
Q 009980          297 LNHPWV  302 (521)
Q Consensus       297 l~h~~~  302 (521)
                      +.||||
T Consensus       286 l~~~~f  291 (291)
T cd07844         286 MKHPYF  291 (291)
T ss_pred             hcCCCC
Confidence            999997

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=100.00  E-value=7.7e-43  Score=336.63  Aligned_cols=240  Identities=27%  Similarity=0.436  Sum_probs=211.1

Q ss_pred             cccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHH
Q 009980           15 TDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKI   94 (521)
Q Consensus        15 ~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l   94 (521)
                      ++.||.|+.|.||+|+.+    ++.||||.++.                                   .-..+|..|++|
T Consensus       129 LeWlGSGaQGAVF~Grl~----netVAVKKV~e-----------------------------------lkETdIKHLRkL  169 (904)
T KOG4721|consen  129 LEWLGSGAQGAVFLGRLH----NETVAVKKVRE-----------------------------------LKETDIKHLRKL  169 (904)
T ss_pred             hhhhccCcccceeeeecc----CceehhHHHhh-----------------------------------hhhhhHHHHHhc
Confidence            577999999999999885    56799998742                                   234689999999


Q ss_pred             hhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q 009980           95 VENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCL  174 (521)
Q Consensus        95 ~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil  174 (521)
                           +||||+.+.+++.....+|||||||..|.|...+.....++......|..+|+.|+.|||.+.|+|||||.-|||
T Consensus       170 -----kH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiL  244 (904)
T KOG4721|consen  170 -----KHPNIITFKGVCTQSPCYCIIMEFCAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNIL  244 (904)
T ss_pred             -----cCcceeeEeeeecCCceeEEeeeccccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceE
Confidence                 999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCcHHHHH
Q 009980          175 FLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQ  254 (521)
Q Consensus       175 ~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~  254 (521)
                      +   ..+..|||+|||-++.........+++||..|||||++...+.+.|+||||+||+|||||||..||.+-+...++-
T Consensus       245 I---s~~d~VKIsDFGTS~e~~~~STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIw  321 (904)
T KOG4721|consen  245 I---SYDDVVKISDFGTSKELSDKSTKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIW  321 (904)
T ss_pred             e---eccceEEeccccchHhhhhhhhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEE
Confidence            9   5566799999999998776667778899999999999999999999999999999999999999998766554443


Q ss_pred             HHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCccc
Q 009980          255 MIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVI  303 (521)
Q Consensus       255 ~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~  303 (521)
                      -+-...+.+  +.+..+|..++-||+.||+-.|..||++.++|.|-=+.
T Consensus       322 GVGsNsL~L--pvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa  368 (904)
T KOG4721|consen  322 GVGSNSLHL--PVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIA  368 (904)
T ss_pred             eccCCcccc--cCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhc
Confidence            333333333  33467899999999999999999999999999997554

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.1e-41  Score=328.17  Aligned_cols=257  Identities=29%  Similarity=0.485  Sum_probs=211.8

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      .-.++|++.+.||+|++|.||+|.++.  +++.||+|++....                             .....+.+
T Consensus         3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~--~~~~~~~k~~~~~~-----------------------------~~~~~~~~   51 (275)
T cd06608           3 DPTGIFELVEVIGEGTYGKVYKARHKK--TGQLVAIKIMDIIE-----------------------------DEEEEIKE   51 (275)
T ss_pred             CchhheeheeeecCCCCeEEEEEEECC--CCcEEEEEEEecCc-----------------------------hhHHHHHH
Confidence            446899999999999999999999987  67899999986421                             12345788


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeCC------eEEEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHH
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQN------GVHLILELCSGGELFDRIVA----QERYMEVGAAAVIRQIAEGLA  156 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~~------~~~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qil~al~  156 (521)
                      |+.+++++    ..||||+++++++....      .+|+||||+.+++|.+++..    ...+++..+..++.|++.||.
T Consensus        52 e~~~l~~~----~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~  127 (275)
T cd06608          52 EYNILRKY----SNHPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLA  127 (275)
T ss_pred             HHHHHHHh----cCCCChheEEEEEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHH
Confidence            99999887    36999999999997644      58999999999999988765    357899999999999999999


Q ss_pred             HHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC-CcccccCCccccccccccc-----CCCCchhhhHHH
Q 009980          157 ALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALLQ-----DRITSKSDMWSL  230 (521)
Q Consensus       157 ~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~-----~~~~~~~Diwsl  230 (521)
                      |||++|++|+||+|+||++   +.++.++|+|||++....... ......|++.|+|||.+..     ..++.++||||+
T Consensus       128 ~lH~~~i~H~~l~p~ni~~---~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~sl  204 (275)
T cd06608         128 YLHENKVIHRDIKGQNILL---TKNAEVKLVDFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSL  204 (275)
T ss_pred             HHhcCCcccCCCCHHHEEE---ccCCeEEECCCccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHh
Confidence            9999999999999999999   667889999999987543222 2234568999999998753     346788999999


Q ss_pred             HHHHHHHHhCCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcc
Q 009980          231 GVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV  302 (521)
Q Consensus       231 G~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~  302 (521)
                      ||++|+|++|.+||...........+..+..... .....+++.+++||.+||..||++|||+.+++.|||+
T Consensus       205 G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~  275 (275)
T cd06608         205 GITAIELADGKPPLCDMHPMRALFKIPRNPPPTL-KSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI  275 (275)
T ss_pred             HHHHHHHHhCCCCccccchHHHHHHhhccCCCCC-CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence            9999999999999987665555555554433211 1113478899999999999999999999999999996

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=100.00  E-value=2.5e-42  Score=333.23  Aligned_cols=255  Identities=27%  Similarity=0.417  Sum_probs=213.7

Q ss_pred             ccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEI   88 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   88 (521)
                      .+.|++.+.||+|+||.||+|.+..  ++..||+|++......                           .....+.+|+
T Consensus         3 ~~~y~~~~~l~~g~~~~vy~~~~~~--~~~~vaiK~~~~~~~~---------------------------~~~~~~~~e~   53 (277)
T cd06642           3 EELFTKLERIGKGSFGEVYKGIDNR--TKEVVAIKIIDLEEAE---------------------------DEIEDIQQEI   53 (277)
T ss_pred             HHHHHHHHHhcCCCCeeEEEEEEcC--CCeEEEEEEeccccch---------------------------HHHHHHHHHH
Confidence            4678889999999999999999987  7789999998642211                           1234578899


Q ss_pred             HHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 009980           89 LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDL  168 (521)
Q Consensus        89 ~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dl  168 (521)
                      .+++++     +||||+++++++..++..|+||||+.|++|.+++.. ..+++..+..++.|++.|+.|||++|++|+||
T Consensus        54 ~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl  127 (277)
T cd06642          54 TVLSQC-----DSPYITRYYGSYLKGTKLWIIMEYLGGGSALDLLKP-GPLEETYIATILREILKGLDYLHSERKIHRDI  127 (277)
T ss_pred             HHHHcC-----CCCccHhhhcccccCCceEEEEEccCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCC
Confidence            999998     999999999999999999999999999999988764 57899999999999999999999999999999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCccCCCCC-CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQ  247 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~  247 (521)
                      +|+||++   +.++.++|+|||++....... ......|+..|+|||.+.+..++.++|+||+||++|+|++|.+||...
T Consensus       128 ~p~ni~i---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~  204 (277)
T cd06642         128 KAANVLL---SEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDL  204 (277)
T ss_pred             ChheEEE---eCCCCEEEccccccccccCcchhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCccc
Confidence            9999999   667889999999997654322 122345888999999999888999999999999999999999999766


Q ss_pred             CcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccC
Q 009980          248 SNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIG  304 (521)
Q Consensus       248 ~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~  304 (521)
                      ........+..+...   .....++..+.+++.+||..+|++|||+.++++|||+..
T Consensus       205 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~  258 (277)
T cd06642         205 HPMRVLFLIPKNSPP---TLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFITR  258 (277)
T ss_pred             chhhHHhhhhcCCCC---CCCcccCHHHHHHHHHHccCCcccCcCHHHHHHhHHHHH
Confidence            555544444333221   112347889999999999999999999999999999864

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=100.00  E-value=1.4e-41  Score=329.09  Aligned_cols=258  Identities=23%  Similarity=0.328  Sum_probs=205.2

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ++|++.+.||+|+||.||+|+++.  +++.||||.++.....                           .....+..|+.
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~--~~~~vaiK~~~~~~~~---------------------------~~~~~~~~e~~   51 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVP--TGTIMAVKRIRATVNS---------------------------QEQKRLLMDLD   51 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcC--CCcEEEEEEEecCCCc---------------------------HHHHHHHHHHH
Confidence            579999999999999999999987  7899999998653211                           11233455655


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC-CCe
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA----QERYMEVGAAAVIRQIAEGLAALHQA-NIV  164 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qil~al~~lH~~-~i~  164 (521)
                      .+.+.    .+||||+++++++..++..|+||||++ |+|.+.+..    ...+++..+..++.||+.||.|||++ +++
T Consensus        52 ~~~~~----~~~~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~  126 (283)
T cd06617          52 ISMRS----VDCPYTVTFYGALFREGDVWICMEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVI  126 (283)
T ss_pred             HHHHH----cCCCCeeeeeEEEecCCcEEEEhhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCee
Confidence            53333    389999999999999999999999997 477776653    34689999999999999999999998 999


Q ss_pred             eccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCccccccccccc----CCCCchhhhHHHHHHHHHHHhC
Q 009980          165 HRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQ----DRITSKSDMWSLGVILYILLSG  240 (521)
Q Consensus       165 H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~~ll~g  240 (521)
                      ||||||+||++   +.++.+||+|||++.............|+..|+|||.+.+    ..++.++|+||+||++|+|++|
T Consensus       127 h~dlkp~nil~---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g  203 (283)
T cd06617         127 HRDVKPSNVLI---NRNGQVKLCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATG  203 (283)
T ss_pred             cCCCCHHHEEE---CCCCCEEEeecccccccccccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhC
Confidence            99999999999   7788999999999976543322233468899999998864    4568899999999999999999


Q ss_pred             CCCCCCCC-cHHHHHHHHcCCC-CCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCCC
Q 009980          241 YPPFIAQS-NRQKQQMIMAGEF-SFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSA  307 (521)
Q Consensus       241 ~~pf~~~~-~~~~~~~i~~~~~-~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~~  307 (521)
                      +.||.... ..+....+..+.. ..+   ...+|.++.++|.+||..+|.+|||+.++++||||.....
T Consensus       204 ~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~  269 (283)
T cd06617         204 RFPYDSWKTPFQQLKQVVEEPSPQLP---AEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELHLS  269 (283)
T ss_pred             CCCCCccccCHHHHHHHHhcCCCCCC---ccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhhccc
Confidence            99996532 2233333333222 121   1347899999999999999999999999999999986543

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=100.00  E-value=1.5e-41  Score=328.51  Aligned_cols=253  Identities=28%  Similarity=0.481  Sum_probs=204.6

Q ss_pred             eeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHH
Q 009980           12 YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVM   91 (521)
Q Consensus        12 Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l   91 (521)
                      |++.+.||+|+||.||+|.++.  +++.||+|.+.+....                           .......+|+.++
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~--~~~~~aik~~~~~~~~---------------------------~~~~~~~~e~~~l   51 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRK--TGKYYAIKCMKKHFKS---------------------------LEQVNNLREIQAL   51 (282)
T ss_pred             CceEeeccccccceEEEEEEcC--CCcEEEEEEehhccCC---------------------------chhhhHHHHHHHH
Confidence            7889999999999999999987  7889999998653211                           1112245688888


Q ss_pred             HHHhhccCCCCCccceeEEEEeC--CeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 009980           92 RKIVENVSPHPNVIDLYDVYEDQ--NGVHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQANIVHRDL  168 (521)
Q Consensus        92 ~~l~~~~~~hpniv~~~~~~~~~--~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dl  168 (521)
                      .++    .+||||+++++++.++  +.+++||||+.| +|.+.+.. ...+++..+..++.|++.||.|||++|++||||
T Consensus        52 ~~l----~~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl  126 (282)
T cd07831          52 RRL----SPHPNILRLIEVLFDRKTGRLALVFELMDM-NLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDI  126 (282)
T ss_pred             hhc----CCCCCccceEEEEecCCCCcEEEEEecCCc-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccc
Confidence            777    3599999999999988  899999999975 88887765 357899999999999999999999999999999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCccccccccccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQ-DRITSKSDMWSLGVILYILLSGYPPFIAQ  247 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~  247 (521)
                      +|+||++   +. +.+||+|||++.............+++.|+|||.+.. +.++.++||||+||++|+|++|.+||.+.
T Consensus       127 ~p~ni~l---~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~  202 (282)
T cd07831         127 KPENILI---KD-DILKLADFGSCRGIYSKPPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGT  202 (282)
T ss_pred             CHHHEEE---cC-CCeEEEecccccccccCCCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCC
Confidence            9999999   55 8999999999986544444444568999999997654 45688999999999999999999999887


Q ss_pred             CcHHHHHHHHcCC------------------CCCch-------hhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcc
Q 009980          248 SNRQKQQMIMAGE------------------FSFYE-------QTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV  302 (521)
Q Consensus       248 ~~~~~~~~i~~~~------------------~~~~~-------~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~  302 (521)
                      +..+....+....                  +.++.       .....+|..+.++|.+||..+|++|||+.++++||||
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~  282 (282)
T cd07831         203 NELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF  282 (282)
T ss_pred             CHHHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence            6655444332211                  11111       1113578999999999999999999999999999997

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=100.00  E-value=1.3e-41  Score=329.72  Aligned_cols=258  Identities=27%  Similarity=0.445  Sum_probs=207.9

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      ....++|++.+.||+|+||.||+|.++.  +++.||+|++....                             .....+.
T Consensus        14 ~~~~~~~~~~~~lg~g~~~~vy~~~~~~--~~~~~~ik~~~~~~-----------------------------~~~~~~~   62 (286)
T cd06638          14 PDPSDTWEIIETIGKGTYGKVFKVLNKK--NGSKAAVKILDPIH-----------------------------DIDEEIE   62 (286)
T ss_pred             CCcccceeeeeeeccCCCcEEEEEEECC--CCceeEEEeecccc-----------------------------chHHHHH
Confidence            3467899999999999999999999987  77899999875321                             1123467


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEE-----eCCeEEEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHH
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYE-----DQNGVHLILELCSGGELFDRIVA----QERYMEVGAAAVIRQIAEGLA  156 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~-----~~~~~~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qil~al~  156 (521)
                      +|+.+++++    .+||||+++++++.     .++.+|+||||++|++|.+.+..    ...+++..+..++.|++.||.
T Consensus        63 ~e~~~l~~l----~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~  138 (286)
T cd06638          63 AEYNILKAL----SDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQ  138 (286)
T ss_pred             HHHHHHHHH----hcCCCeeeeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHH
Confidence            888888887    36999999999873     44679999999999999987652    356889999999999999999


Q ss_pred             HHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC-CcccccCCccccccccccc-----CCCCchhhhHHH
Q 009980          157 ALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALLQ-----DRITSKSDMWSL  230 (521)
Q Consensus       157 ~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~-----~~~~~~~Diwsl  230 (521)
                      |||+++++||||||+||++   +.++.++|+|||++....... ......|++.|+|||.+..     ..++.++||||+
T Consensus       139 ~lH~~~i~H~dlkp~nili---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~sl  215 (286)
T cd06638         139 HLHVNKTIHRDVKGNNILL---TTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSL  215 (286)
T ss_pred             HHHhCCccccCCCHHhEEE---CCCCCEEEccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhH
Confidence            9999999999999999999   667789999999987543222 2233468999999998753     457889999999


Q ss_pred             HHHHHHHHhCCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcc
Q 009980          231 GVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV  302 (521)
Q Consensus       231 G~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~  302 (521)
                      ||++|+|++|+.||...........+...... .......++..+.+++.+||..||++|||+.++++||||
T Consensus       216 Gvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~  286 (286)
T cd06638         216 GITAIELGDGDPPLADLHPMRALFKIPRNPPP-TLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI  286 (286)
T ss_pred             HHHHHHHhcCCCCCCCCchhHHHhhccccCCC-cccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence            99999999999999876654443333222211 111123467889999999999999999999999999997

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=100.00  E-value=3e-43  Score=316.81  Aligned_cols=269  Identities=29%  Similarity=0.428  Sum_probs=210.0

Q ss_pred             cccceeecccccccCceEEEEeEEccCCCc--ceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCGET--NQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~--~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      ....|++.+.||+|.||.||+|..+.+...  +.||||.++-.....-                          .....-
T Consensus        22 ~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tG--------------------------iS~SAc   75 (438)
T KOG0666|consen   22 DLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTG--------------------------ISMSAC   75 (438)
T ss_pred             HHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCC--------------------------cCHHHH
Confidence            446899999999999999999987765443  3899999875432210                          112356


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEe-CCeEEEEEeccCCCchHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYED-QNGVHLILELCSGGELFDRIVAQ-----ERYMEVGAAAVIRQIAEGLAALH  159 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~-~~~~~lv~e~~~gg~L~~~l~~~-----~~~~~~~~~~i~~qil~al~~lH  159 (521)
                      +|+.+++.|     .||||+.+..+|-. +..+++++||.+. +|+..|...     ..++...++.|+.||+.|+.|||
T Consensus        76 REiaL~REl-----~h~nvi~Lv~Vfl~~d~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH  149 (438)
T KOG0666|consen   76 REIALLREL-----KHPNVISLVKVFLSHDKKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLH  149 (438)
T ss_pred             HHHHHHHHh-----cCCcchhHHHHHhccCceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHh
Confidence            899999999     99999999999977 8899999999977 898888642     45889999999999999999999


Q ss_pred             HCCCeeccCCCCcEEEeeC-CCCCCEEEeecCCCccCCCCC----CcccccCCcccccccccccC-CCCchhhhHHHHHH
Q 009980          160 QANIVHRDLKPENCLFLND-REDSPLKIMDFGLSSVEGYTD----PVVGLFGSIDYVSPEALLQD-RITSKSDMWSLGVI  233 (521)
Q Consensus       160 ~~~i~H~dlkp~Nil~~~~-~~~~~~kl~Dfg~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~i  233 (521)
                      ++-|+||||||.|||+..+ .+.|.|||+|+|+|+.....-    .....+.|.+|+|||.+.+. .|+++.||||+|||
T Consensus       150 ~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCI  229 (438)
T KOG0666|consen  150 SNWVLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCI  229 (438)
T ss_pred             hhheeeccCCcceEEEeccCCccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHH
Confidence            9999999999999999543 345899999999998754321    12344679999999999865 68999999999999


Q ss_pred             HHHHHhCCCCCCCCCcH---------HHHHHHHcCCCCCchh---------------------------------hhhcc
Q 009980          234 LYILLSGYPPFIAQSNR---------QKQQMIMAGEFSFYEQ---------------------------------TWKNI  271 (521)
Q Consensus       234 l~~ll~g~~pf~~~~~~---------~~~~~i~~~~~~~~~~---------------------------------~~~~~  271 (521)
                      +.||+|-+|.|.+....         .....|..-...+...                                 .+..-
T Consensus       230 faElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k  309 (438)
T KOG0666|consen  230 FAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVK  309 (438)
T ss_pred             HHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCC
Confidence            99999999988664321         1222232211111111                                 11223


Q ss_pred             CHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCCCc
Q 009980          272 SSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAK  308 (521)
Q Consensus       272 s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~~~  308 (521)
                      ++.+.+|+.+||+.||.+|+|++++|+|+||..+..+
T Consensus       310 ~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~d~lp  346 (438)
T KOG0666|consen  310 DPSALDLLQKLLTYDPIKRITAEQALEHPYFTEDPLP  346 (438)
T ss_pred             CchHHHHHHHHhccCchhhccHHHHhcccccccCCCC
Confidence            5568899999999999999999999999999987554

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5e-44  Score=340.79  Aligned_cols=261  Identities=26%  Similarity=0.458  Sum_probs=235.0

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      .+.+++..||-|+||.|=++....  ....+|+|+++|......                         .....+..|-+
T Consensus       420 ~dl~~iaTLGvGgFGRVELV~~~~--~~~~fAlKilkK~hIVdt-------------------------kQqeHv~sEr~  472 (732)
T KOG0614|consen  420 SDLKRIATLGVGGFGRVELVKVNS--QKATFALKILKKKHIVDT-------------------------KQQEHVFSERN  472 (732)
T ss_pred             hhhhhhhhcccCccceEEEEEecc--cchHHHHHHHhHhhccch-------------------------hHHHHHHhHHH
Confidence            456777889999999999988765  344599999988655431                         22345778888


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCC
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLK  169 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlk  169 (521)
                      +|..+     +.|.||++|-.|.++.++|++||-|-||+|+..+..+++|.+..++.++..+++|+.|||++||+.||||
T Consensus       473 Im~~~-----~s~fIvrLYrTfrd~kyvYmLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLK  547 (732)
T KOG0614|consen  473 IMMEC-----RSDFIVRLYRTFRDSKYVYMLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLK  547 (732)
T ss_pred             HHHhc-----CchHHHHHHHHhccchhhhhhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCC
Confidence            88887     8999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCc
Q 009980          170 PENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSN  249 (521)
Q Consensus       170 p~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~  249 (521)
                      |+|.++   +.+|.+||.|||+|+....+....+.||||.|.|||++.++..+.++|.||||+++|||++|.|||.+.++
T Consensus       548 PENllL---d~~Gy~KLVDFGFAKki~~g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dp  624 (732)
T KOG0614|consen  548 PENLLL---DNRGYLKLVDFGFAKKIGSGRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDP  624 (732)
T ss_pred             hhheee---ccCCceEEeehhhHHHhccCCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCch
Confidence            999999   89999999999999999888888899999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCC-----HHHHHcCCcccCCCC
Q 009980          250 RQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPS-----AQELLNHPWVIGDSA  307 (521)
Q Consensus       250 ~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t-----~~~~l~h~~~~~~~~  307 (521)
                      ...+..|.+|.-.+..+  +.++..+.+||+++...+|.+|..     +.++-+|.||.+-..
T Consensus       625 mktYn~ILkGid~i~~P--r~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfdw  685 (732)
T KOG0614|consen  625 MKTYNLILKGIDKIEFP--RRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFDW  685 (732)
T ss_pred             HHHHHHHHhhhhhhhcc--cccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcCCh
Confidence            99999999986544332  678999999999999999999976     899999999987554

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=9.3e-42  Score=330.42  Aligned_cols=258  Identities=23%  Similarity=0.330  Sum_probs=214.7

Q ss_pred             ccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEI   88 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   88 (521)
                      .++|++.+.||+|+||+||+|.+..  +++.||+|++......                           .....+.+|+
T Consensus         4 ~~~~~~~~~ig~g~~g~v~~~~~~~--~~~~~a~k~~~~~~~~---------------------------~~~~~~~~E~   54 (284)
T cd06620           4 NEDLETISDLGAGNGGSVSKVKHIP--TGTVMAKKVVHIGAKS---------------------------SVRKQILREL   54 (284)
T ss_pred             HHHHHHHHHcCCCCCeEEEEEEEcC--CCcEEEEEEEEecCcc---------------------------hHHHHHHHHH
Confidence            3689999999999999999999987  7889999998642211                           1234578899


Q ss_pred             HHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecc
Q 009980           89 LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ-ANIVHRD  167 (521)
Q Consensus        89 ~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~-~~i~H~d  167 (521)
                      .+++.+     +||||+++++++...+.+|+||||++|++|.+++...+.+++..+..++.|++.||.|||+ .|++|||
T Consensus        55 ~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~d  129 (284)
T cd06620          55 QIMHEC-----RSPYIVSFYGAFLNENNICMCMEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRD  129 (284)
T ss_pred             HHHHHc-----CCCCcceEeeeEecCCEEEEEEecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccC
Confidence            999998     9999999999999999999999999999999999888889999999999999999999997 5999999


Q ss_pred             CCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 009980          168 LKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQ  247 (521)
Q Consensus       168 lkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~  247 (521)
                      |+|+||++   +.++.++|+|||++...... ......|+..|+|||++.+..++.++|+||+||++|++++|..||...
T Consensus       130 l~p~nil~---~~~~~~~l~d~gl~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~  205 (284)
T cd06620         130 IKPSNILV---NSRGQIKLCDFGVSGELINS-IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFS  205 (284)
T ss_pred             CCHHHEEE---CCCCcEEEccCCcccchhhh-ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCccc
Confidence            99999999   67788999999998654222 123346899999999998888999999999999999999999999765


Q ss_pred             CcH-----------HHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCC
Q 009980          248 SNR-----------QKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDS  306 (521)
Q Consensus       248 ~~~-----------~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~  306 (521)
                      ...           +....+.......  .....++..+.+|+.+||..||.+|||+.++++||||....
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~~  273 (284)
T cd06620         206 NIDDDGQDDPMGILDLLQQIVQEPPPR--LPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQAL  273 (284)
T ss_pred             chhhhhhhhhhHHHHHHHHHhhccCCC--CCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccc
Confidence            542           2222232222111  11123788999999999999999999999999999997543

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=100.00  E-value=1.3e-41  Score=326.12  Aligned_cols=252  Identities=22%  Similarity=0.302  Sum_probs=210.1

Q ss_pred             ccceeecccccccCceEEEEeEEcc-CCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKT-CGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~-~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      .++|++.+.||+|+||.||+|..+. ...+..||+|.++.....                           .....+.+|
T Consensus         4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~---------------------------~~~~~~~~e   56 (266)
T cd05064           4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSD---------------------------KQRRGFLAE   56 (266)
T ss_pred             hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCH---------------------------HHHHHHHHH
Confidence            4679999999999999999998753 225678999998642110                           123457889


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQANIVHR  166 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~~~i~H~  166 (521)
                      +.+++++     +||||+++++++..++..|+||||+++|+|.+++... ..+++..+..++.||+.||.|||++|++||
T Consensus        57 ~~~l~~l-----~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~  131 (266)
T cd05064          57 ALTLGQF-----DHSNIVRLEGVITRGNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHK  131 (266)
T ss_pred             HHHHhcC-----CCCCcCeEEEEEecCCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeec
Confidence            9999888     9999999999999999999999999999999988764 578999999999999999999999999999


Q ss_pred             cCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcc--cccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CCCC
Q 009980          167 DLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVV--GLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPP  243 (521)
Q Consensus       167 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~p  243 (521)
                      ||||+||++   +.++.++++|||.+..........  ...+++.|+|||.+.+..++.++||||+||++|++++ |.+|
T Consensus       132 dikp~nili---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p  208 (266)
T cd05064         132 GLAAHKVLV---NSDLVCKISGFRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERP  208 (266)
T ss_pred             cccHhhEEE---cCCCcEEECCCcccccccccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCC
Confidence            999999999   677899999999876532221111  2235678999999998999999999999999999775 9999


Q ss_pred             CCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          244 FIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       244 f~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      |.+.+..+....+..+....   .+..++..+.+++.+||+.+|.+|||+.++++
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~  260 (266)
T cd05064         209 YWDMSGQDVIKAVEDGFRLP---APRNCPNLLHQLMLDCWQKERGERPRFSQIHS  260 (266)
T ss_pred             cCcCCHHHHHHHHHCCCCCC---CCCCCCHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence            99888877777776653322   23568999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=100.00  E-value=6.1e-42  Score=343.64  Aligned_cols=255  Identities=22%  Similarity=0.345  Sum_probs=205.2

Q ss_pred             cccceeecccccccCceEEEEeEEccCC---CcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCG---ETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALL   84 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (521)
                      -.++|++.+.||+|+||.||+|++...+   ++..||||++......                           .....+
T Consensus        36 ~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~---------------------------~~~~~~   88 (374)
T cd05106          36 PRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHT---------------------------DEREAL   88 (374)
T ss_pred             cHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCH---------------------------HHHHHH
Confidence            3567999999999999999999875421   3457999998643211                           113457


Q ss_pred             HHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc----------------------------
Q 009980           85 TNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ----------------------------  136 (521)
Q Consensus        85 ~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~----------------------------  136 (521)
                      .+|+.+++.+    .+||||+++++++...+.+|+|||||.+|+|.+++...                            
T Consensus        89 ~~E~~il~~l----~~h~nIv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (374)
T cd05106          89 MSELKILSHL----GQHKNIVNLLGACTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEK  164 (374)
T ss_pred             HHHHHHHHhh----ccCCceeeEeeEecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhc
Confidence            7899999887    47999999999999999999999999999999988542                            


Q ss_pred             ------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q 009980          137 ------------------------------------------ERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCL  174 (521)
Q Consensus       137 ------------------------------------------~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil  174 (521)
                                                                .++++..+..++.||+.||.|||++||+||||||+|||
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil  244 (374)
T cd05106         165 KYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVL  244 (374)
T ss_pred             ccccccccccccccccccccCCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEE
Confidence                                                      24678889999999999999999999999999999999


Q ss_pred             EeeCCCCCCEEEeecCCCccCCCCCCc---ccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCCcH
Q 009980          175 FLNDREDSPLKIMDFGLSSVEGYTDPV---VGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNR  250 (521)
Q Consensus       175 ~~~~~~~~~~kl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~  250 (521)
                      +   +.++.+||+|||+++........   ....+++.|+|||++.+..++.++||||+||++|+|++ |+.||......
T Consensus       245 ~---~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~  321 (374)
T cd05106         245 L---TDGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVN  321 (374)
T ss_pred             E---eCCCeEEEeeceeeeeccCCcceeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCcccccc
Confidence            9   66788999999999754322211   12235667999999988899999999999999999997 99999876655


Q ss_pred             HHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          251 QKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       251 ~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      ...............  ...+|+++++++.+||+.||.+|||+.++++
T Consensus       322 ~~~~~~~~~~~~~~~--~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~  367 (374)
T cd05106         322 SKFYKMVKRGYQMSR--PDFAPPEIYSIMKMCWNLEPTERPTFSQISQ  367 (374)
T ss_pred             HHHHHHHHcccCccC--CCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            444444443332222  2347899999999999999999999999976

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=100.00  E-value=5.6e-42  Score=333.01  Aligned_cols=262  Identities=26%  Similarity=0.435  Sum_probs=216.6

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      ...+.|.....||.|+||.||+|.+..  ++..||||.+.....                            .....+.+
T Consensus        19 ~~~~~~~~~~~lg~g~~g~v~~~~~~~--~~~~vaiK~~~~~~~----------------------------~~~~~~~~   68 (292)
T cd06658          19 DPREYLDSFIKIGEGSTGIVCIATEKH--TGKQVAVKKMDLRKQ----------------------------QRRELLFN   68 (292)
T ss_pred             chHHHHhhhhcccCCCCeEEEEEEECC--CCCEEEEEEEecchH----------------------------HHHHHHHH
Confidence            345667777889999999999999887  788999999853211                            12345788


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHR  166 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~  166 (521)
                      |+..++.+     +||||+++++.+...+..|+||||++|++|.+++.. +.+++..+..++.||+.||.|||++||+||
T Consensus        69 e~~~l~~l-----~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~  142 (292)
T cd06658          69 EVVIMRDY-----HHENVVDMYNSYLVGDELWVVMEFLEGGALTDIVTH-TRMNEEQIATVCLSVLRALSYLHNQGVIHR  142 (292)
T ss_pred             HHHHHHhC-----CCCcHHHHHHheecCCeEEEEEeCCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCEeec
Confidence            99999988     999999999999999999999999999999887754 578999999999999999999999999999


Q ss_pred             cCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC-CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCC
Q 009980          167 DLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFI  245 (521)
Q Consensus       167 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~  245 (521)
                      ||||+||++   +.++.++|+|||++....... ......|++.|+|||.+.+..++.++|+||+|+++|+|++|+.||.
T Consensus       143 dlkp~Nill---~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~  219 (292)
T cd06658         143 DIKSDSILL---TSDGRIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYF  219 (292)
T ss_pred             CCCHHHEEE---cCCCCEEEccCcchhhcccccccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence            999999999   667889999999986543221 2233568999999999988889999999999999999999999998


Q ss_pred             CCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCCCc
Q 009980          246 AQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAK  308 (521)
Q Consensus       246 ~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~~~  308 (521)
                      ..+.......+..... ........++..+++++.+||..||.+|||++++++||||.....+
T Consensus       220 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~~~~  281 (292)
T cd06658         220 NEPPLQAMRRIRDNLP-PRVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKLAGPP  281 (292)
T ss_pred             CCCHHHHHHHHHhcCC-CccccccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhccCCc
Confidence            8776655554433221 1111223578899999999999999999999999999999865443

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=100.00  E-value=9.3e-42  Score=342.66  Aligned_cols=255  Identities=22%  Similarity=0.351  Sum_probs=203.7

Q ss_pred             ccceeecccccccCceEEEEeEEc---cCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKK---TCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~---~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      .++|++.+.||+|+||.||+|...   ...++..||||+++.....                           .....+.
T Consensus        34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~---------------------------~~~~~~~   86 (375)
T cd05104          34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHL---------------------------TEREALM   86 (375)
T ss_pred             hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCc---------------------------HHHHHHH
Confidence            358999999999999999999752   1225678999998642211                           1234578


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC----------------------------
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE----------------------------  137 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~----------------------------  137 (521)
                      +|+.+++.+    .+||||+++++++...+..|+|||||+||+|.+++....                            
T Consensus        87 ~Ei~il~~l----~~HpnIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (375)
T cd05104          87 SELKVLSYL----GNHINIVNLLGACTVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSC  162 (375)
T ss_pred             HHHHHHHHh----cCCcceeeeeeeeccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccc
Confidence            899999887    479999999999999999999999999999999886432                            


Q ss_pred             -----------------------------------------------CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCC
Q 009980          138 -----------------------------------------------RYMEVGAAAVIRQIAEGLAALHQANIVHRDLKP  170 (521)
Q Consensus       138 -----------------------------------------------~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp  170 (521)
                                                                     .+++..+..++.||+.||.|||++||+||||||
T Consensus       163 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp  242 (375)
T cd05104         163 DSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAA  242 (375)
T ss_pred             hhhhhhhhcCCCcccccccccccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCch
Confidence                                                           367888999999999999999999999999999


Q ss_pred             CcEEEeeCCCCCCEEEeecCCCccCCCCCC---cccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CCCCCCC
Q 009980          171 ENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIA  246 (521)
Q Consensus       171 ~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~pf~~  246 (521)
                      +|||+   +.++.+||+|||+++.......   .....+++.|+|||.+.+..++.++|||||||++|+|++ |.+||..
T Consensus       243 ~Nill---~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~  319 (375)
T cd05104         243 RNILL---THGRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPG  319 (375)
T ss_pred             hhEEE---ECCCcEEEecCccceeccCcccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCC
Confidence            99999   5677899999999976433221   112235667999999999899999999999999999998 8999977


Q ss_pred             CCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          247 QSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       247 ~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      ..................  .+...+.++++|+.+||..||++|||+.++++.
T Consensus       320 ~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~  370 (375)
T cd05104         320 MPVDSKFYKMIKEGYRML--SPECAPSEMYDIMKSCWDADPLKRPTFKQIVQL  370 (375)
T ss_pred             CCchHHHHHHHHhCccCC--CCCCCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence            654433333333322221  123468899999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=100.00  E-value=1.2e-41  Score=329.62  Aligned_cols=253  Identities=27%  Similarity=0.419  Sum_probs=212.9

Q ss_pred             ccceeecccccccCceEEEEeEEccCC---CcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCG---ETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      .++|++.+.||+|+||.||+|.....+   ....||+|.+.....                           ......+.
T Consensus         4 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~---------------------------~~~~~~~~   56 (283)
T cd05048           4 LSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAE---------------------------PKVQQEFR   56 (283)
T ss_pred             hHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCC---------------------------HHHHHHHH
Confidence            468999999999999999999876521   236799998753211                           11234578


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc----------------CCCCHHHHHHHHH
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ----------------ERYMEVGAAAVIR  149 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~----------------~~~~~~~~~~i~~  149 (521)
                      +|+..+.++     +||||+++++++......|++|||+++++|.+++...                ..+++..+..++.
T Consensus        57 ~ei~~l~~l-----~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  131 (283)
T cd05048          57 QEAELMSDL-----QHPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAI  131 (283)
T ss_pred             HHHHHHHhc-----CCcccceEEEEEcCCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHH
Confidence            899999998     9999999999999999999999999999999998764                4578899999999


Q ss_pred             HHHHHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC---CcccccCCcccccccccccCCCCchhh
Q 009980          150 QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD---PVVGLFGSIDYVSPEALLQDRITSKSD  226 (521)
Q Consensus       150 qil~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~D  226 (521)
                      |++.||.|||++|++||||||+||++   +.++.++|+|||++.......   ......+++.|+|||.+.+..++.++|
T Consensus       132 ~l~~al~~lH~~~i~H~dlkp~Nil~---~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sD  208 (283)
T cd05048         132 QIAAGMEYLSSHHFVHRDLAARNCLV---GEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESD  208 (283)
T ss_pred             HHHHHHHHHHhCCeeccccccceEEE---cCCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhh
Confidence            99999999999999999999999999   677889999999987543221   122345788899999998888999999


Q ss_pred             hHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          227 MWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       227 iwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      ||||||++|+|++ |..||.+.+..+....+..+.....   ...+|+++.+|+.+||+.||.+|||+.+++++
T Consensus       209 v~slG~il~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~  279 (283)
T cd05048         209 IWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRSRQLLPC---PEDCPARVYALMIECWNEIPARRPRFKDIHTR  279 (283)
T ss_pred             HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCC---cccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            9999999999998 9999998888888777776654322   25689999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=100.00  E-value=2.2e-41  Score=332.11  Aligned_cols=259  Identities=25%  Similarity=0.399  Sum_probs=204.2

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      ...++|++.+.||+|+||.||+|.++.  +++.||||.+.......                          .......+
T Consensus         9 ~~~~~y~~~~~lg~g~~~~v~~~~~~~--~~~~~aik~~~~~~~~~--------------------------~~~~~~~~   60 (310)
T cd07865           9 DEVSKYEKLAKIGQGTFGEVFKARHKK--TKQIVALKKVLMENEKE--------------------------GFPITALR   60 (310)
T ss_pred             chhhheEEEEEeecCCCEEEEEEEECC--CCcEEEEEEEeccCCcC--------------------------CchhHHHH
Confidence            345689999999999999999999987  78899999986432111                          11223567


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeCC--------eEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHH
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQN--------GVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAA  157 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~~--------~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~  157 (521)
                      |+.+++++     +||||+++++++....        ..|+||||+.+ +|.+.+... ..+++.++..++.||+.||.|
T Consensus        61 e~~~l~~l-----~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~  134 (310)
T cd07865          61 EIKILQLL-----KHENVVNLIEICRTKATPYNRYKGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYY  134 (310)
T ss_pred             HHHHHHhC-----CCCCccceEEEEecccccccCCCceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHH
Confidence            99999998     9999999999986654        45999999965 787777654 368999999999999999999


Q ss_pred             HHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC-----CcccccCCcccccccccccC-CCCchhhhHHHH
Q 009980          158 LHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD-----PVVGLFGSIDYVSPEALLQD-RITSKSDMWSLG  231 (521)
Q Consensus       158 lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG  231 (521)
                      ||++|++|+||||+||++   +.++.+||+|||++.......     ......+++.|+|||.+.+. .++.++|+||+|
T Consensus       135 lH~~~i~H~dl~p~nil~---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG  211 (310)
T cd07865         135 IHRNKILHRDMKAANILI---TKDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAG  211 (310)
T ss_pred             HHHCCeeccCCCHHHEEE---CCCCcEEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHH
Confidence            999999999999999999   778899999999997543221     11234578889999988654 478899999999


Q ss_pred             HHHHHHHhCCCCCCCCCcHHHHHHHHcCCCCCchhhh----------------------------hccCHHHHHHHHHhc
Q 009980          232 VILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTW----------------------------KNISSSAKQLISSLL  283 (521)
Q Consensus       232 ~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~----------------------------~~~s~~~~~li~~~l  283 (521)
                      +++|+|++|.+||.+.+.......+..-....+...+                            ...++.+++||.+||
T Consensus       212 ~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l  291 (310)
T cd07865         212 CIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLL  291 (310)
T ss_pred             HHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHh
Confidence            9999999999999877655444333321111111000                            113567889999999


Q ss_pred             cCCCCCCCCHHHHHcCCcc
Q 009980          284 TVDPNRRPSAQELLNHPWV  302 (521)
Q Consensus       284 ~~dp~~R~t~~~~l~h~~~  302 (521)
                      ..||.+|||++++|+||||
T Consensus       292 ~~~P~~R~t~~e~l~h~~f  310 (310)
T cd07865         292 VLDPAKRIDADTALNHDFF  310 (310)
T ss_pred             cCChhhccCHHHHhcCCCC
Confidence            9999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=100.00  E-value=2.5e-41  Score=326.17  Aligned_cols=253  Identities=27%  Similarity=0.426  Sum_probs=202.9

Q ss_pred             cccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHHhh
Q 009980           17 ILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVE   96 (521)
Q Consensus        17 ~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~   96 (521)
                      .||+|+||.||+|.+..  +++.||+|++.+......                         ........|..+++.+. 
T Consensus         1 ~ig~g~~g~Vy~~~~~~--~~~~vaiK~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~-   52 (278)
T cd05606           1 IIGRGGFGEVYGCRKAD--TGKMYAMKCLDKKRIKMK-------------------------QGETLALNERIMLSLVS-   52 (278)
T ss_pred             CcccCCCeEEEEEEEec--CCCEEEEEEeeccccccc-------------------------hhHHHHHHHHHHHHHHH-
Confidence            48999999999999987  788999999876432210                         11112333443333321 


Q ss_pred             ccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEe
Q 009980           97 NVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFL  176 (521)
Q Consensus        97 ~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~~  176 (521)
                       ...||||+++++++.+.+.+|+||||+.|++|.+++...+.+++..+..++.|++.||.|||+.+|+||||||+||++ 
T Consensus        53 -~~~~~~i~~~~~~~~~~~~~~~v~e~~~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili-  130 (278)
T cd05606          53 -TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILL-  130 (278)
T ss_pred             -hCCCCcEeeeeeeeecCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEE-
Confidence             138999999999999999999999999999999999888889999999999999999999999999999999999999 


Q ss_pred             eCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccC-CCCchhhhHHHHHHHHHHHhCCCCCCCCC---cHHH
Q 009980          177 NDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQD-RITSKSDMWSLGVILYILLSGYPPFIAQS---NRQK  252 (521)
Q Consensus       177 ~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~---~~~~  252 (521)
                        +.++.++|+|||++...... ......|++.|+|||.+.++ .++.++||||+||++|+|++|..||....   ....
T Consensus       131 --~~~~~~kl~dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~  207 (278)
T cd05606         131 --DEHGHVRISDLGLACDFSKK-KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI  207 (278)
T ss_pred             --CCCCCEEEccCcCccccCcc-CCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHH
Confidence              67788999999998754322 22345799999999998754 68999999999999999999999997763   2232


Q ss_pred             HHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCC-----CHHHHHcCCcccCCC
Q 009980          253 QQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRP-----SAQELLNHPWVIGDS  306 (521)
Q Consensus       253 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~-----t~~~~l~h~~~~~~~  306 (521)
                      ...+.......    +..+|+.+.+++.+||..+|.+||     ++.++++||||....
T Consensus       208 ~~~~~~~~~~~----~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~  262 (278)
T cd05606         208 DRMTLTMAVEL----PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLD  262 (278)
T ss_pred             HHHhhccCCCC----CCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCCC
Confidence            22332222222    245799999999999999999999     999999999997643

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=100.00  E-value=6.1e-42  Score=339.47  Aligned_cols=264  Identities=26%  Similarity=0.411  Sum_probs=212.5

Q ss_pred             cccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      +.++|++.+.||+|+||.||+|.++.  +++.||+|.+.......                          .....+.+|
T Consensus         3 ~~~~y~~~~~lg~g~~g~v~~~~~~~--~~~~valK~~~~~~~~~--------------------------~~~~~~~~e   54 (334)
T cd07855           3 VGSRYKPIENIGSGAYGVVCSAIDTR--SGKKVAIKKIPHAFDVP--------------------------TLAKRTLRE   54 (334)
T ss_pred             hhhceeeeeeeecCCCeEEEEEEEcC--CCCEEEEEEeccccccc--------------------------cchHHHHHH
Confidence            45899999999999999999999988  78899999986432110                          123346789


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEe----CCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYED----QNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANI  163 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~----~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i  163 (521)
                      +.+++++     +||||+++++++..    ...+|+||||+. ++|.+.+...+.+++..+..++.||+.||.|||++||
T Consensus        55 ~~~l~~l-----~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i  128 (334)
T cd07855          55 LKILRHF-----KHDNIIAIRDILRPPGADFKDVYVVMDLME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANV  128 (334)
T ss_pred             HHHHHhc-----CCCCccCHHHhccccCCCCceEEEEEehhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            9999998     89999999998863    357899999995 5899998877889999999999999999999999999


Q ss_pred             eeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC-----CcccccCCccccccccccc-CCCCchhhhHHHHHHHHHH
Q 009980          164 VHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD-----PVVGLFGSIDYVSPEALLQ-DRITSKSDMWSLGVILYIL  237 (521)
Q Consensus       164 ~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~l  237 (521)
                      +||||||+||++   +.++.+||+|||++.......     ......|+..|+|||.+.+ ..++.++||||+||++|+|
T Consensus       129 vH~dlkp~Nil~---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el  205 (334)
T cd07855         129 IHRDLKPSNLLV---NEDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEM  205 (334)
T ss_pred             ecCCCCHHHEEE---cCCCcEEecccccceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHH
Confidence            999999999999   778899999999987543221     1123468999999999865 4588999999999999999


Q ss_pred             HhCCCCCCCCCcHHHHHHHHcCCC--------------------------CCc-hhhhhccCHHHHHHHHHhccCCCCCC
Q 009980          238 LSGYPPFIAQSNRQKQQMIMAGEF--------------------------SFY-EQTWKNISSSAKQLISSLLTVDPNRR  290 (521)
Q Consensus       238 l~g~~pf~~~~~~~~~~~i~~~~~--------------------------~~~-~~~~~~~s~~~~~li~~~l~~dp~~R  290 (521)
                      ++|++||.+.+.......+.....                          ..+ ...++.++.+++++|.+||+.+|.+|
T Consensus       206 ~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R  285 (334)
T cd07855         206 LGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEER  285 (334)
T ss_pred             HcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhC
Confidence            999999987665433322221100                          000 11224578999999999999999999


Q ss_pred             CCHHHHHcCCcccCCCCc
Q 009980          291 PSAQELLNHPWVIGDSAK  308 (521)
Q Consensus       291 ~t~~~~l~h~~~~~~~~~  308 (521)
                      ||+.+++.||||.+...+
T Consensus       286 pt~~~~l~~~~~~~~~~~  303 (334)
T cd07855         286 ITVEQALQHPFLAQYHDP  303 (334)
T ss_pred             cCHHHHHhChhhhhccCC
Confidence            999999999999765443

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=8.8e-42  Score=338.65  Aligned_cols=260  Identities=27%  Similarity=0.445  Sum_probs=210.8

Q ss_pred             cccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      +.++|.+.+.||+|+||.||+|++..  +++.||||.+.......                          .....+.+|
T Consensus         3 ~~~~y~~~~~lg~G~~~~vy~~~~~~--~~~~vaiK~~~~~~~~~--------------------------~~~~~~~~E   54 (337)
T cd07858           3 VDTKYVPIKPIGRGAYGIVCSAKNSE--TNEKVAIKKIANAFDNR--------------------------IDAKRTLRE   54 (337)
T ss_pred             cccceeEEEEeccCCCeEEEEEEecC--CCCeEEEEEeccccccc--------------------------chhHHHHHH
Confidence            56789999999999999999999987  78899999986421110                          112346689


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEeC-----CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYEDQ-----NGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQAN  162 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~~-----~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~  162 (521)
                      +.+++.+     +||||+++++++...     ...|+||||+. ++|.+++...+++++..+..++.|++.||.|||++|
T Consensus        55 ~~~l~~l-----~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~  128 (337)
T cd07858          55 IKLLRHL-----DHENVIAIKDIMPPPHREAFNDVYIVYELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSAN  128 (337)
T ss_pred             HHHHHhc-----CCCCccchHHheecccccccCcEEEEEeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999998     999999999988654     35899999995 689999988889999999999999999999999999


Q ss_pred             CeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCC-CCcccccCCccccccccccc-CCCCchhhhHHHHHHHHHHHhC
Q 009980          163 IVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYT-DPVVGLFGSIDYVSPEALLQ-DRITSKSDMWSLGVILYILLSG  240 (521)
Q Consensus       163 i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~ll~g  240 (521)
                      ++||||||+||++   +.++.+||+|||++...... .......|+..|+|||.+.+ ..++.++||||+||++|+|++|
T Consensus       129 i~H~dlkp~Nil~---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g  205 (337)
T cd07858         129 VLHRDLKPSNLLL---NANCDLKICDFGLARTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGR  205 (337)
T ss_pred             EecCCCCHHHEEE---cCCCCEEECcCccccccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcC
Confidence            9999999999999   67788999999999865433 22234468899999998864 4688999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHHcCC---------------------------CCCchhhhhccCHHHHHHHHHhccCCCCCCCCH
Q 009980          241 YPPFIAQSNRQKQQMIMAGE---------------------------FSFYEQTWKNISSSAKQLISSLLTVDPNRRPSA  293 (521)
Q Consensus       241 ~~pf~~~~~~~~~~~i~~~~---------------------------~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~  293 (521)
                      ++||.+.+.......+....                           .......++.+++.++++|.+||+.+|.+|||+
T Consensus       206 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~  285 (337)
T cd07858         206 KPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITV  285 (337)
T ss_pred             CCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCH
Confidence            99997765433222221100                           000112235689999999999999999999999


Q ss_pred             HHHHcCCcccC
Q 009980          294 QELLNHPWVIG  304 (521)
Q Consensus       294 ~~~l~h~~~~~  304 (521)
                      +++++||||..
T Consensus       286 ~ell~h~~~~~  296 (337)
T cd07858         286 EEALAHPYLAS  296 (337)
T ss_pred             HHHHcCcchhh
Confidence            99999999964

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=100.00  E-value=1.7e-41  Score=331.88  Aligned_cols=256  Identities=25%  Similarity=0.311  Sum_probs=204.0

Q ss_pred             cccceeecccccccCceEEEEeEEcc--------------CCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccc
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKT--------------CGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPT   73 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~--------------~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (521)
                      ..++|++.+.||+|+||.||+|.+..              .+++..||+|++.....                       
T Consensus         3 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~-----------------------   59 (304)
T cd05096           3 PRGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDAN-----------------------   59 (304)
T ss_pred             chhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCC-----------------------
Confidence            35789999999999999999998642              22445799999864211                       


Q ss_pred             cccccccHHHHHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC----------------
Q 009980           74 RKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE----------------  137 (521)
Q Consensus        74 ~~~~~~~~~~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~----------------  137 (521)
                          ......+.+|+.++.++     +||||+++++++.+.+..|+||||+.+|+|.+++....                
T Consensus        60 ----~~~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~  130 (304)
T cd05096          60 ----KNARNDFLKEVKILSRL-----KDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAH  130 (304)
T ss_pred             ----HHHHHHHHHHHHHHhhc-----CCCCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhcccccccccccccccccc
Confidence                11234578999999998     99999999999999999999999999999999886532                


Q ss_pred             ---CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC---cccccCCcccc
Q 009980          138 ---RYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYV  211 (521)
Q Consensus       138 ---~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~  211 (521)
                         .++...+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+++.......   .....+++.|+
T Consensus       131 ~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~dlkp~Nill---~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~  207 (304)
T cd05096         131 CLPAISYSSLLHVALQIASGMKYLSSLNFVHRDLATRNCLV---GENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWM  207 (304)
T ss_pred             ccccccHHHHHHHHHHHHHHHHHHHHCCccccCcchhheEE---cCCccEEECCCccceecccCceeEecCcCCCCcccc
Confidence               35778899999999999999999999999999999999   6778899999999975432221   12234578899


Q ss_pred             cccccccCCCCchhhhHHHHHHHHHHHh--CCCCCCCCCcHHHHHHHHcC----CCCCchhhhhccCHHHHHHHHHhccC
Q 009980          212 SPEALLQDRITSKSDMWSLGVILYILLS--GYPPFIAQSNRQKQQMIMAG----EFSFYEQTWKNISSSAKQLISSLLTV  285 (521)
Q Consensus       212 aPE~~~~~~~~~~~DiwslG~il~~ll~--g~~pf~~~~~~~~~~~i~~~----~~~~~~~~~~~~s~~~~~li~~~l~~  285 (521)
                      |||++.+..++.++||||||+++|+|++  +..||...+..+....+...    ...........+++.+.+|+.+||..
T Consensus       208 aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  287 (304)
T cd05096         208 AWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSR  287 (304)
T ss_pred             CHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccC
Confidence            9999988889999999999999999986  66788776665554443221    11111112245789999999999999


Q ss_pred             CCCCCCCHHHHHc
Q 009980          286 DPNRRPSAQELLN  298 (521)
Q Consensus       286 dp~~R~t~~~~l~  298 (521)
                      ||.+|||+.++..
T Consensus       288 ~p~~RPs~~~i~~  300 (304)
T cd05096         288 DCRERPSFSDIHA  300 (304)
T ss_pred             CchhCcCHHHHHH
Confidence            9999999999954

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=100.00  E-value=1.9e-41  Score=327.54  Aligned_cols=252  Identities=25%  Similarity=0.394  Sum_probs=213.6

Q ss_pred             ccceeecccccccCceEEEEeEEccC---CCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTC---GETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      .++|.+.+.||+|+||.||+|.+...   .+++.||||++......                           .....+.
T Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~---------------------------~~~~~~~   56 (280)
T cd05049           4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASN---------------------------DARKDFE   56 (280)
T ss_pred             hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCH---------------------------HHHHHHH
Confidence            46799999999999999999988642   24678999998642110                           1235688


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC--------------CCCHHHHHHHHHHH
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE--------------RYMEVGAAAVIRQI  151 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--------------~~~~~~~~~i~~qi  151 (521)
                      +|+.+++++     .||||+++++++......|+||||++|++|.+++...+              .+++..+..++.|+
T Consensus        57 ~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i  131 (280)
T cd05049          57 REAELLTNF-----QHENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQI  131 (280)
T ss_pred             HHHHHHHhc-----CCCCchheeeEEecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHH
Confidence            999999998     99999999999999999999999999999999997543              47889999999999


Q ss_pred             HHHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC---CcccccCCcccccccccccCCCCchhhhH
Q 009980          152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD---PVVGLFGSIDYVSPEALLQDRITSKSDMW  228 (521)
Q Consensus       152 l~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  228 (521)
                      +.|+.|||++|++||||||+||++   +.++.++|+|||++.......   ......+++.|+|||.+.+..++.++|||
T Consensus       132 ~~~l~~lH~~~i~h~dlkp~nili---~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  208 (280)
T cd05049         132 ASGMVYLASQHFVHRDLATRNCLV---GYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVW  208 (280)
T ss_pred             HHHHHHHhhCCeeccccccceEEE---cCCCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHH
Confidence            999999999999999999999999   677899999999987532221   11233467889999999999999999999


Q ss_pred             HHHHHHHHHHh-CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          229 SLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       229 slG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      ||||++|+|++ |..||...+..+....+..+......   ..++..+++++.+||..||.+|||+.++++
T Consensus       209 slG~il~e~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rp~~~eil~  276 (280)
T cd05049         209 SFGVVLWEIFTYGKQPWYGLSNEEVIECITQGRLLQRP---RTCPSEVYDIMLGCWKRDPQQRINIKDIHE  276 (280)
T ss_pred             HHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCcCCCC---CCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            99999999998 99999888888888887766554332   458899999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=100.00  E-value=1.5e-41  Score=337.02  Aligned_cols=261  Identities=27%  Similarity=0.443  Sum_probs=207.0

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      ++.++|++.+.||+|+||.||+|+++.  +++.||||.+......                           .....+.+
T Consensus         2 ~~~~~y~i~~~lg~G~~g~vy~~~~~~--~~~~vaiK~~~~~~~~---------------------------~~~~~~~~   52 (336)
T cd07849           2 DVGPRYQNLSYIGEGAYGMVCSATHKP--TGVKVAIKKISPFEHQ---------------------------TFCQRTLR   52 (336)
T ss_pred             ccccceEEEEEEEecCCeEEEEEEEcC--CCCeEEEEEecccccc---------------------------hhHHHHHH
Confidence            467899999999999999999999987  7889999998532110                           11234678


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeC-----CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQ-----NGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQA  161 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~-----~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~  161 (521)
                      |+.+++++     +||||+++++++...     ...|+||||+.+ +|.+.+. ...+++..+..++.|++.||.|||++
T Consensus        53 E~~~l~~l-----~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~-~~~l~~~~~~~i~~ql~~aL~~LH~~  125 (336)
T cd07849          53 EIKILRRF-----KHENIIGILDIIRPPSFESFNDVYIVQELMET-DLYKLIK-TQHLSNDHIQYFLYQILRGLKYIHSA  125 (336)
T ss_pred             HHHHHHhC-----CCCCcCchhheeecccccccceEEEEehhccc-CHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            99999998     899999999987654     358999999965 8877764 45799999999999999999999999


Q ss_pred             CCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC----CcccccCCccccccccccc-CCCCchhhhHHHHHHHHH
Q 009980          162 NIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD----PVVGLFGSIDYVSPEALLQ-DRITSKSDMWSLGVILYI  236 (521)
Q Consensus       162 ~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~  236 (521)
                      ||+||||||+||++   +.++.+||+|||++.......    ......||+.|+|||.+.+ ..++.++||||+||++|+
T Consensus       126 ~ivH~dlkp~Nill---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~e  202 (336)
T cd07849         126 NVLHRDLKPSNLLL---NTNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAE  202 (336)
T ss_pred             CeeccCCCHHHEEE---CCCCCEEECcccceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHH
Confidence            99999999999999   778899999999987543222    1123468999999998754 468899999999999999


Q ss_pred             HHhCCCCCCCCCcHHHHHHHHcCCC------------------------CC---chhhhhccCHHHHHHHHHhccCCCCC
Q 009980          237 LLSGYPPFIAQSNRQKQQMIMAGEF------------------------SF---YEQTWKNISSSAKQLISSLLTVDPNR  289 (521)
Q Consensus       237 ll~g~~pf~~~~~~~~~~~i~~~~~------------------------~~---~~~~~~~~s~~~~~li~~~l~~dp~~  289 (521)
                      |++|++||.+.+.......+.....                        ..   .....+.+++++.++|.+||+.+|.+
T Consensus       203 l~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~  282 (336)
T cd07849         203 MLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHK  282 (336)
T ss_pred             HHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhh
Confidence            9999999977654332222111000                        00   01112456889999999999999999


Q ss_pred             CCCHHHHHcCCcccCCC
Q 009980          290 RPSAQELLNHPWVIGDS  306 (521)
Q Consensus       290 R~t~~~~l~h~~~~~~~  306 (521)
                      |||+.++++||||....
T Consensus       283 Rpt~~e~l~hp~~~~~~  299 (336)
T cd07849         283 RITVEEALAHPYLEQYH  299 (336)
T ss_pred             CcCHHHHhcCccccccC
Confidence            99999999999997543

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=100.00  E-value=2.4e-41  Score=322.22  Aligned_cols=249  Identities=26%  Similarity=0.448  Sum_probs=213.3

Q ss_pred             ceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHH
Q 009980           11 EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILV   90 (521)
Q Consensus        11 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   90 (521)
                      +|++.+.||.|+||.||+|.++.  +++.||+|.++.....                           .....+.+|+.+
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~--~~~~~~iK~~~~~~~~---------------------------~~~~~~~~e~~~   51 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVN--SDQKYAMKEIRLPKSS---------------------------SAVEDSRKEAVL   51 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcC--CCceEEEEEEEcCcch---------------------------HHHHHHHHHHHH
Confidence            58999999999999999999987  7889999998642211                           123457789999


Q ss_pred             HHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 009980           91 MRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA--QERYMEVGAAAVIRQIAEGLAALHQANIVHRDL  168 (521)
Q Consensus        91 l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~--~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dl  168 (521)
                      ++.+     +||||+++++.+.+++.+|+||||+++++|.+++..  ...+++..+..++.|++.||.|||++||+|+||
T Consensus        52 l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl  126 (255)
T cd08219          52 LAKM-----KHPNIVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDI  126 (255)
T ss_pred             HHhC-----CCCCcceEEEEEEECCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCC
Confidence            9988     999999999999999999999999999999998864  345899999999999999999999999999999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCccCCCCC-CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQ  247 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~  247 (521)
                      ||+||++   +.++.++++|||.+....... ......|++.|+|||++.+..++.++|+||+|+++|+|++|..||...
T Consensus       127 ~p~nili---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~  203 (255)
T cd08219         127 KSKNIFL---TQNGKVKLGDFGSARLLTSPGAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQAN  203 (255)
T ss_pred             CcceEEE---CCCCcEEEcccCcceeecccccccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCC
Confidence            9999999   777889999999987553322 123356899999999998888999999999999999999999999888


Q ss_pred             CcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          248 SNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       248 ~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      +.......+..+......   ..++..++++|.+||..||++|||+.+++.-
T Consensus       204 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         204 SWKNLILKVCQGSYKPLP---SHYSYELRSLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             CHHHHHHHHhcCCCCCCC---cccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence            777777777666554322   4578899999999999999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=100.00  E-value=6.3e-43  Score=323.93  Aligned_cols=269  Identities=26%  Similarity=0.408  Sum_probs=214.9

Q ss_pred             ccccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHH
Q 009980            3 QETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDA   82 (521)
Q Consensus         3 ~~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (521)
                      +.+..+..+|++++.+|+|.||.|..+.+..  ++..||||+++...                             ..+.
T Consensus        82 ~~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~--~~~~vAlKIik~V~-----------------------------kYre  130 (415)
T KOG0671|consen   82 QVGDILTNRYEIVDLLGEGTFGKVVECWDRE--TKEHVALKIIKNVD-----------------------------KYRE  130 (415)
T ss_pred             EeccccccceehhhhhcCCcccceEEEeecC--CCceehHHHHHHHH-----------------------------HHhh
Confidence            3466789999999999999999999999998  68899999996422                             2233


Q ss_pred             HHHHHHHHHHHHhhccCCC-CCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH
Q 009980           83 LLTNEILVMRKIVENVSPH-PNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE--RYMEVGAAAVIRQIAEGLAALH  159 (521)
Q Consensus        83 ~~~~E~~~l~~l~~~~~~h-pniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~al~~lH  159 (521)
                      ...-|+.++.++...-... --++.+.++|.-.+++|||+|.+ |.|+++++..+.  +++...++.+.+|++.+++|||
T Consensus       131 Aa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh  209 (415)
T KOG0671|consen  131 AALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLH  209 (415)
T ss_pred             HHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHH
Confidence            4567999999995432111 23788889999999999999998 779999998754  6889999999999999999999


Q ss_pred             HCCCeeccCCCCcEEEeeCC-----------------CCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCC
Q 009980          160 QANIVHRDLKPENCLFLNDR-----------------EDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRIT  222 (521)
Q Consensus       160 ~~~i~H~dlkp~Nil~~~~~-----------------~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  222 (521)
                      +.+++|.||||+|||+.+.+                 .+..|+++|||.|+.....  ....+.|..|+|||++.+-+++
T Consensus       210 ~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~--hs~iVsTRHYRAPEViLgLGwS  287 (415)
T KOG0671|consen  210 DLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEH--HSTIVSTRHYRAPEVILGLGWS  287 (415)
T ss_pred             hcceeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceeccC--cceeeeccccCCchheeccCcC
Confidence            99999999999999996531                 1345999999999875433  3556789999999999999999


Q ss_pred             chhhhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHcCCCCCchhh----------------hhc----------------
Q 009980          223 SKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQT----------------WKN----------------  270 (521)
Q Consensus       223 ~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~----------------~~~----------------  270 (521)
                      .+|||||+||||+||++|...|.+..+.+-+..+..-..++|...                |++                
T Consensus       288 ~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckp  367 (415)
T KOG0671|consen  288 QPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKP  367 (415)
T ss_pred             CccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCcc
Confidence            999999999999999999999998886663322211111111100                000                


Q ss_pred             ----------cCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCC
Q 009980          271 ----------ISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGD  305 (521)
Q Consensus       271 ----------~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~  305 (521)
                                -..++.+||++||..||.+|+|+.|+|.||||...
T Consensus       368 l~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~~  412 (415)
T KOG0671|consen  368 LKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSHPFFARL  412 (415)
T ss_pred             HHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcCHHhhcC
Confidence                      11246799999999999999999999999999764

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=3e-42  Score=332.40  Aligned_cols=257  Identities=28%  Similarity=0.406  Sum_probs=201.8

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ..|++.+.||+||.+.||++..-.   .+.||+|.+.-....                          .....-+.+|+.
T Consensus       361 ~~Yeilk~iG~GGSSkV~kV~~s~---~~iyalkkv~~~~~D--------------------------~qtl~gy~nEI~  411 (677)
T KOG0596|consen  361 REYEILKQIGSGGSSKVFKVLNSD---KQIYALKKVVLLEAD--------------------------NQTLDGYRNEIA  411 (677)
T ss_pred             chhhHHHhhcCCCcceeeeeecCC---CcchhhhHHHHhhcC--------------------------HHHHHHHHHHHH
Confidence            579999999999999999998764   456777765432211                          123345889999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCH-HHHHHHHHHHHHHHHHHHHCCCeeccC
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYME-VGAAAVIRQIAEGLAALHQANIVHRDL  168 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~-~~~~~i~~qil~al~~lH~~~i~H~dl  168 (521)
                      .|.+|    ..|.+||+++++-..++.+|+||||=+ .+|...|.+.....+ ..++.+..|||.|++++|..||||.||
T Consensus       412 lL~KL----kg~~~IIqL~DYEv~d~~lYmvmE~Gd-~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDL  486 (677)
T KOG0596|consen  412 LLNKL----KGHDKIIQLYDYEVTDGYLYMVMECGD-IDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDL  486 (677)
T ss_pred             HHHHh----cCCceEEEEeeeeccCceEEEEeeccc-ccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCC
Confidence            99998    589999999999999999999999853 489888887655443 689999999999999999999999999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCccCCCCCC---cccccCCcccccccccccCC-----------CCchhhhHHHHHHH
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALLQDR-----------ITSKSDMWSLGVIL  234 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~-----------~~~~~DiwslG~il  234 (521)
                      ||.|+|+    -.|.+||+|||+|........   ..+.+||+.|||||.+....           .++++|||||||||
T Consensus       487 KPANFLl----VkG~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCIL  562 (677)
T KOG0596|consen  487 KPANFLL----VKGRLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCIL  562 (677)
T ss_pred             CcccEEE----EeeeEEeeeechhcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHH
Confidence            9999998    468899999999987654332   23568999999999986433           45689999999999


Q ss_pred             HHHHhCCCCCCCCC-cHHHHHHHHcCCC--CCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCCC
Q 009980          235 YILLSGYPPFIAQS-NRQKQQMIMAGEF--SFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSA  307 (521)
Q Consensus       235 ~~ll~g~~pf~~~~-~~~~~~~i~~~~~--~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~~  307 (521)
                      |+|+.|++||.... ...-+..|....-  +|+...   -..++.++++.||.+||.+|||+.++|+|||+.....
T Consensus       563 YqMvYgktPf~~~~n~~aKl~aI~~P~~~Iefp~~~---~~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~~~i  635 (677)
T KOG0596|consen  563 YQMVYGKTPFGQIINQIAKLHAITDPNHEIEFPDIP---ENDELIDVMKCCLARDPKKRWSIPELLQHPFLQIQPI  635 (677)
T ss_pred             HHHHhcCCchHHHHHHHHHHHhhcCCCccccccCCC---CchHHHHHHHHHHhcCcccCCCcHHHhcCcccccccc
Confidence            99999999996543 2233334443322  332211   1123899999999999999999999999999986443

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=100.00  E-value=1.1e-41  Score=329.11  Aligned_cols=254  Identities=34%  Similarity=0.550  Sum_probs=219.3

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ++|++.+.||+|+||.||+|..+.  +++.||+|++.+.....                         ......+.+|..
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~--~~~~~~ik~~~~~~~~~-------------------------~~~~~~~~~e~~   53 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKE--TNKEYAIKILDKRQLIK-------------------------EKKVKYVKIEKE   53 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcC--CCCEEEEEEechHhccc-------------------------hHHHHHHHHHHH
Confidence            479999999999999999999987  78899999987533211                         012345778888


Q ss_pred             HHHHHhhccCC-CCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 009980           90 VMRKIVENVSP-HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDL  168 (521)
Q Consensus        90 ~l~~l~~~~~~-hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dl  168 (521)
                      +++++     . ||||+++++++.+.+..++||||+.|++|.+++...+.+++..+..++.|++.||.|||+.|++|+||
T Consensus        54 ~~~~l-----~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl  128 (280)
T cd05581          54 VLTRL-----NGHPGIIKLYYTFQDEENLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDL  128 (280)
T ss_pred             HHHhc-----ccCCCchhHHHHhcCCceEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCC
Confidence            88887     6 99999999999999999999999999999999998889999999999999999999999999999999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCccCCCCC---------------------CcccccCCcccccccccccCCCCchhhh
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSSVEGYTD---------------------PVVGLFGSIDYVSPEALLQDRITSKSDM  227 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~---------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di  227 (521)
                      +|+||++   +.++.++|+|||++.......                     ......|++.|+|||.+....++.++|+
T Consensus       129 ~~~ni~i---~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di  205 (280)
T cd05581         129 KPENILL---DKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDL  205 (280)
T ss_pred             CHHHeEE---CCCCCEEecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhH
Confidence            9999999   677889999999987543222                     1123357889999999988888999999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCH----HHHHcCCcc
Q 009980          228 WSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSA----QELLNHPWV  302 (521)
Q Consensus       228 wslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~----~~~l~h~~~  302 (521)
                      ||||++++++++|..||...+.......+......++    ..+++.+.+||.+||..+|.+|||+    +++++||||
T Consensus       206 ~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~  280 (280)
T cd05581         206 WALGCIIYQMLTGKPPFRGSNEYLTFQKILKLEYSFP----PNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF  280 (280)
T ss_pred             HHHHHHHHHHHhCCCCCCCccHHHHHHHHHhcCCCCC----CccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence            9999999999999999998877666666665555444    4568999999999999999999999    999999997

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=100.00  E-value=3.1e-41  Score=328.52  Aligned_cols=259  Identities=25%  Similarity=0.389  Sum_probs=207.6

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ++|++.+.||.|++|.||+|.++.  +++.||+|.+.......                          .....+.+|+.
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~--~~~~~~iK~~~~~~~~~--------------------------~~~~~~~~e~~   53 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRV--TNETIALKKIRLEQEDE--------------------------GVPSTAIREIS   53 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecC--CCcEEEEEehhhccccc--------------------------cchHHHHHHHH
Confidence            679999999999999999999987  78899999986432211                          11234778999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCCeecc
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQER--YMEVGAAAVIRQIAEGLAALHQANIVHRD  167 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~--~~~~~~~~i~~qil~al~~lH~~~i~H~d  167 (521)
                      +++++     +||||+++++++.+...+|+||||+.+ +|.+.+.....  +++..+..++.||+.||.|||++|++|+|
T Consensus        54 ~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~d  127 (294)
T PLN00009         54 LLKEM-----QHGNIVRLQDVVHSEKRLYLVFEYLDL-DLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRD  127 (294)
T ss_pred             HHHhc-----cCCCEeeEEEEEecCCeEEEEEecccc-cHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCC
Confidence            99998     999999999999999999999999964 88888765443  57888999999999999999999999999


Q ss_pred             CCCCcEEEeeCCCCCCEEEeecCCCccCCCCC-CcccccCCccccccccccc-CCCCchhhhHHHHHHHHHHHhCCCCCC
Q 009980          168 LKPENCLFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALLQ-DRITSKSDMWSLGVILYILLSGYPPFI  245 (521)
Q Consensus       168 lkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~ll~g~~pf~  245 (521)
                      |+|+||++.  ..++.+||+|||++....... ......|++.|+|||.+.+ ..++.++||||+||++|+|++|.+||.
T Consensus       128 l~p~nill~--~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~  205 (294)
T PLN00009        128 LKPQNLLID--RRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFP  205 (294)
T ss_pred             CCcceEEEE--CCCCEEEEcccccccccCCCccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence            999999992  234579999999997543221 2233457889999998865 357899999999999999999999998


Q ss_pred             CCCcHHHHHHHHcCCCCCch-------------------------hhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCC
Q 009980          246 AQSNRQKQQMIMAGEFSFYE-------------------------QTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHP  300 (521)
Q Consensus       246 ~~~~~~~~~~i~~~~~~~~~-------------------------~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~  300 (521)
                      ..+..+....+.........                         ...+.+++.+.++|.+||+.+|++||++.+++.||
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~  285 (294)
T PLN00009        206 GDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHE  285 (294)
T ss_pred             CCCHHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCc
Confidence            77665544443221110000                         11245788999999999999999999999999999


Q ss_pred             cccC
Q 009980          301 WVIG  304 (521)
Q Consensus       301 ~~~~  304 (521)
                      ||..
T Consensus       286 ~~~~  289 (294)
T PLN00009        286 YFKD  289 (294)
T ss_pred             hHhH
Confidence            9975

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=100.00  E-value=4.2e-41  Score=325.86  Aligned_cols=254  Identities=26%  Similarity=0.441  Sum_probs=208.5

Q ss_pred             ceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHH
Q 009980           11 EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILV   90 (521)
Q Consensus        11 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   90 (521)
                      +|++.+.||.|++|.||+|+++.  ++..||||.+......                           .....+.+|+.+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~--~~~~~~iK~~~~~~~~---------------------------~~~~~~~~E~~~   51 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRT--TGEIVALKEIHLDAEE---------------------------GTPSTAIREISL   51 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECC--CCeEEEEEEecccccc---------------------------cchHHHHHHHHH
Confidence            58999999999999999999987  7889999998653221                           112346789999


Q ss_pred             HHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCCeecc
Q 009980           91 MRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ---ERYMEVGAAAVIRQIAEGLAALHQANIVHRD  167 (521)
Q Consensus        91 l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~---~~~~~~~~~~i~~qil~al~~lH~~~i~H~d  167 (521)
                      ++++     +||||+++++++.+.+..|+||||+.| +|.+++...   ..+++..+..++.|++.||.|||++|++|||
T Consensus        52 l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~d  125 (284)
T cd07836          52 MKEL-----KHENIVRLHDVIHTENKLMLVFEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRD  125 (284)
T ss_pred             HHhh-----cCCCEeeeeeeEeeCCcEEEEEecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCC
Confidence            9998     999999999999999999999999986 888887654   3589999999999999999999999999999


Q ss_pred             CCCCcEEEeeCCCCCCEEEeecCCCccCCCCC-CcccccCCcccccccccccC-CCCchhhhHHHHHHHHHHHhCCCCCC
Q 009980          168 LKPENCLFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALLQD-RITSKSDMWSLGVILYILLSGYPPFI  245 (521)
Q Consensus       168 lkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~~ll~g~~pf~  245 (521)
                      |+|+||++   +.++.++|+|||++....... ......+++.|+|||.+.+. .++.++|+||+||++|+|++|++||.
T Consensus       126 l~p~ni~~---~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~  202 (284)
T cd07836         126 LKPQNLLI---NKRGELKLADFGLARAFGIPVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFP  202 (284)
T ss_pred             CCHHHEEE---CCCCcEEEeecchhhhhcCCccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence            99999999   677889999999997543221 22334578899999988653 56889999999999999999999998


Q ss_pred             CCCcHHHHHHHHcCCCCCch-------------------------hhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCC
Q 009980          246 AQSNRQKQQMIMAGEFSFYE-------------------------QTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHP  300 (521)
Q Consensus       246 ~~~~~~~~~~i~~~~~~~~~-------------------------~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~  300 (521)
                      +.+..+....+.........                         ...+.+++.+++++.+||+.||.+|||+.++++||
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~  282 (284)
T cd07836         203 GTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHP  282 (284)
T ss_pred             CCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCC
Confidence            87766655544322111100                         11134688899999999999999999999999999


Q ss_pred             cc
Q 009980          301 WV  302 (521)
Q Consensus       301 ~~  302 (521)
                      ||
T Consensus       283 ~f  284 (284)
T cd07836         283 WF  284 (284)
T ss_pred             CC
Confidence            97

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=100.00  E-value=2.3e-41  Score=323.98  Aligned_cols=255  Identities=31%  Similarity=0.467  Sum_probs=217.6

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ++|++.+.||.|++|.||+|.++.  +++.||||++......                           .....+.+|+.
T Consensus         1 ~~~~~~~~i~~g~~~~v~~~~~~~--~~~~~~vk~~~~~~~~---------------------------~~~~~~~~e~~   51 (264)
T cd06623           1 SDLERVKVLGQGSSGVVYKVRHKP--TGKIYALKKIHVDGDE---------------------------EFRKQLLRELK   51 (264)
T ss_pred             CcceeeeeeeecCCeEEEEEEEcC--CCcEEEEEEeccCcch---------------------------HHHHHHHHHHH
Confidence            479999999999999999999987  7889999998643210                           12355888999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeccC
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ-ANIVHRDL  168 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~-~~i~H~dl  168 (521)
                      ++.++     +||||+++++++..++..|+||||++|++|.+++.....+++..+..++.|++.|+.|||+ .|++||||
T Consensus        52 ~l~~l-----~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l  126 (264)
T cd06623          52 TLRSC-----ESPYVVKCYGAFYKEGEISIVLEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDI  126 (264)
T ss_pred             HHHhc-----CCCCeeeEEEEEccCCeEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCC
Confidence            99998     8999999999999999999999999999999999888889999999999999999999999 99999999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCccCCCCCCc-ccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSSVEGYTDPV-VGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQ  247 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~  247 (521)
                      +|+||++   +.++.++|+|||.+......... ....++..|+|||.+....++.++|+||||+++|+|++|..||...
T Consensus       127 ~~~ni~~---~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~  203 (264)
T cd06623         127 KPSNLLI---NSKGEVKIADFGISKVLENTLDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPP  203 (264)
T ss_pred             CHHHEEE---CCCCCEEEccCccceecccCCCcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccc
Confidence            9999999   77889999999999865433322 2446889999999999888999999999999999999999999776


Q ss_pred             C---cHHHHHHHHcCCCCCchhhhhc-cCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccC
Q 009980          248 S---NRQKQQMIMAGEFSFYEQTWKN-ISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIG  304 (521)
Q Consensus       248 ~---~~~~~~~i~~~~~~~~~~~~~~-~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~  304 (521)
                      .   ..+....+.......   .... +|..+.++|.+||..+|++|||+.++++|||++.
T Consensus       204 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~  261 (264)
T cd06623         204 GQPSFFELMQAICDGPPPS---LPAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKK  261 (264)
T ss_pred             cccCHHHHHHHHhcCCCCC---CCcccCCHHHHHHHHHHccCChhhCCCHHHHHhCHHHHh
Confidence            4   334444444332221   1133 7899999999999999999999999999999964

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=100.00  E-value=7.9e-41  Score=327.63  Aligned_cols=260  Identities=26%  Similarity=0.415  Sum_probs=214.0

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      ......|++.+.||+|+||.||+|.+..  +++.||+|.+.......                         ......+.
T Consensus        11 ~~~~~~y~~~~~lg~g~~g~vy~~~~~~--~~~~v~iK~~~~~~~~~-------------------------~~~~~~~~   63 (307)
T cd06607          11 DDPEKLFTDLREIGHGSFGAVYFARDVR--TNEVVAIKKMSYSGKQS-------------------------NEKWQDII   63 (307)
T ss_pred             CCcchhhhhheeecCCCCeEEEEEEEcC--CCcEEEEEEEeccccCc-------------------------HHHHHHHH
Confidence            4556789999999999999999999987  78899999986432211                         01224577


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQANIV  164 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~al~~lH~~~i~  164 (521)
                      +|+.+++.+     +||||+++++++.+.+..|+||||+.| +|.+.+.. ...+++..+..++.|++.||.|||+.||+
T Consensus        64 ~Ei~~l~~l-----~h~niv~~~~~~~~~~~~~lv~e~~~g-~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~  137 (307)
T cd06607          64 KEVRFLQQL-----RHPNTIEYKGCYLREHTAWLVMEYCLG-SASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERI  137 (307)
T ss_pred             HHHHHHHhC-----CCCCEEEEEEEEEeCCeEEEEHHhhCC-CHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCce
Confidence            899999998     999999999999999999999999975 67666653 45789999999999999999999999999


Q ss_pred             eccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccc---cCCCCchhhhHHHHHHHHHHHhCC
Q 009980          165 HRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALL---QDRITSKSDMWSLGVILYILLSGY  241 (521)
Q Consensus       165 H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~~ll~g~  241 (521)
                      ||||+|+||++   +.++.++|+|||++......   ....|++.|+|||++.   ...++.++||||+|+++|+|++|.
T Consensus       138 H~dl~p~nIl~---~~~~~~kL~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~  211 (307)
T cd06607         138 HRDIKAGNILL---TEPGTVKLADFGSASLVSPA---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK  211 (307)
T ss_pred             ecCCCcccEEE---CCCCCEEEeecCcceecCCC---CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCC
Confidence            99999999999   67788999999998764332   2346888999999874   356888999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCC
Q 009980          242 PPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDS  306 (521)
Q Consensus       242 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~  306 (521)
                      +||.+.+.......+........  ....++..++++|.+||..+|++|||+.+++.|||+....
T Consensus       212 ~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~  274 (307)
T cd06607         212 PPLFNMNAMSALYHIAQNDSPTL--SSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRER  274 (307)
T ss_pred             CCCCCccHHHHHHHHhcCCCCCC--CchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcccC
Confidence            99987766555544443322211  1134688999999999999999999999999999998644

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=100.00  E-value=3.4e-41  Score=326.33  Aligned_cols=254  Identities=26%  Similarity=0.416  Sum_probs=207.7

Q ss_pred             eeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHH
Q 009980           12 YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVM   91 (521)
Q Consensus        12 Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l   91 (521)
                      |++.+.||.|++|.||+|.++.  ++..||+|++.......                          .....+.+|+.++
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~--~~~~~~ik~~~~~~~~~--------------------------~~~~~~~~E~~~l   52 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKL--TGEIVALKKIRLETEDE--------------------------GVPSTAIREISLL   52 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcC--CCCEEEEEEeecccccc--------------------------cchhHHHHHHHHH
Confidence            7888999999999999999987  78899999986532211                          1123467899999


Q ss_pred             HHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCC
Q 009980           92 RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE--RYMEVGAAAVIRQIAEGLAALHQANIVHRDLK  169 (521)
Q Consensus        92 ~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~al~~lH~~~i~H~dlk  169 (521)
                      +++     +||||+++++++.+.+..|+||||+. ++|.+++....  .+++..+..++.|++.||.|||+++++||||+
T Consensus        53 ~~l-----~~~~iv~~~~~~~~~~~~~iv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~  126 (283)
T cd07835          53 KEL-----NHPNIVRLLDVVHSENKLYLVFEFLD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLK  126 (283)
T ss_pred             Hhc-----CCCCccCHhheeccCCeEEEEEeccC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCC
Confidence            998     99999999999999999999999995 58999887765  68999999999999999999999999999999


Q ss_pred             CCcEEEeeCCCCCCEEEeecCCCccCCCCC-CcccccCCcccccccccccC-CCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 009980          170 PENCLFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALLQD-RITSKSDMWSLGVILYILLSGYPPFIAQ  247 (521)
Q Consensus       170 p~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~  247 (521)
                      |+||++   +.++.++|+|||++....... ......+++.|+|||++.+. .++.++|+||+|+++|+|++|++||.+.
T Consensus       127 p~nil~---~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~  203 (283)
T cd07835         127 PQNLLI---DREGALKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGD  203 (283)
T ss_pred             HHHEEE---cCCCcEEEeecccccccCCCccccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            999999   668899999999997543221 22233568899999988654 5688999999999999999999999877


Q ss_pred             CcHHHHHHHHcCCC-------------------------CCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcc
Q 009980          248 SNRQKQQMIMAGEF-------------------------SFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV  302 (521)
Q Consensus       248 ~~~~~~~~i~~~~~-------------------------~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~  302 (521)
                      +.......+.....                         .........++..+.++|.+||+.+|.+|||+.+++.||||
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~  283 (283)
T cd07835         204 SEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF  283 (283)
T ss_pred             CHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence            65444333322111                         11112234578899999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=100.00  E-value=4.1e-41  Score=324.66  Aligned_cols=256  Identities=27%  Similarity=0.429  Sum_probs=215.2

Q ss_pred             ccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEI   88 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   88 (521)
                      .+-|++.+.||.|+||.||+|.+..  ++..||||++......                           .....+.+|+
T Consensus         3 ~~~~~~~~~ig~G~~~~vy~~~~~~--~~~~~aiK~~~~~~~~---------------------------~~~~~~~~e~   53 (277)
T cd06641           3 EELFTKLEKIGKGSFGEVFKGIDNR--TQKVVAIKIIDLEEAE---------------------------DEIEDIQQEI   53 (277)
T ss_pred             HHhhhhheeEeecCCeEEEEEEECC--CCcEEEEEEeccccch---------------------------HHHHHHHHHH
Confidence            3568889999999999999999887  7789999997532111                           1234578899


Q ss_pred             HHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 009980           89 LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDL  168 (521)
Q Consensus        89 ~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dl  168 (521)
                      ..++++     +||||+++++++..+...|+||||+.|++|.+++.. ..+++..+..++.|++.|+.|||++|++|+||
T Consensus        54 ~~l~~l-----~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~-~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl  127 (277)
T cd06641          54 TVLSQC-----DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKKIHRDI  127 (277)
T ss_pred             HHHHhc-----CCCCEeEEEEEEEeCCeEEEEEEeCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHccCCeecCCC
Confidence            999998     999999999999999999999999999999988764 56899999999999999999999999999999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCccCCCCCC-cccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSSVEGYTDP-VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQ  247 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~  247 (521)
                      +|+||++   +.++.++|+|||++........ .....|+..|+|||.+.+..++.++|+||+||++|+|++|.+||...
T Consensus       128 ~p~Ni~i---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~  204 (277)
T cd06641         128 KAANVLL---SEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSEL  204 (277)
T ss_pred             CHHhEEE---CCCCCEEEeecccceecccchhhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCcc
Confidence            9999999   6778899999999875433221 22346888999999998888899999999999999999999999877


Q ss_pred             CcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCC
Q 009980          248 SNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGD  305 (521)
Q Consensus       248 ~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~  305 (521)
                      ........+..+..+.   ....++.++.+++.+||..+|.+||++.++++||||...
T Consensus       205 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~~  259 (277)
T cd06641         205 HPMKVLFLIPKNNPPT---LEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIVRF  259 (277)
T ss_pred             chHHHHHHHhcCCCCC---CCcccCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhhh
Confidence            6655555554443221   224578999999999999999999999999999999864

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=100.00  E-value=4.1e-41  Score=325.97  Aligned_cols=257  Identities=26%  Similarity=0.467  Sum_probs=216.6

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      .+|...+.||.|++|.||+|.++.  +++.+|+|.+.....                            .....+.+|+.
T Consensus        19 ~~~~~~~~lg~g~~g~v~~~~~~~--~~~~~~iK~~~~~~~----------------------------~~~~~~~~e~~   68 (285)
T cd06648          19 SYLDNFVKIGEGSTGIVCIATDKS--TGRQVAVKKMDLRKQ----------------------------QRRELLFNEVV   68 (285)
T ss_pred             HhhhcceEeccCCCeEEEEEEECC--CCCEEEEEEEeccch----------------------------hHHHHHHHHHH
Confidence            466667899999999999999887  778999998753211                            12345788999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCC
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLK  169 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlk  169 (521)
                      +++.+     +||||+++++++...+..|+|+||+.|++|.+++.. +++++..+..++.|++.||.|||++|++||||+
T Consensus        69 ~l~~~-----~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~  142 (285)
T cd06648          69 IMRDY-----QHPNIVEMYSSYLVGDELWVVMEFLEGGALTDIVTH-TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIK  142 (285)
T ss_pred             HHHHc-----CCCChheEEEEEEcCCeEEEEEeccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence            99998     999999999999999999999999999999998877 679999999999999999999999999999999


Q ss_pred             CCcEEEeeCCCCCCEEEeecCCCccCCCCC-CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCC
Q 009980          170 PENCLFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQS  248 (521)
Q Consensus       170 p~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~  248 (521)
                      |+||++   +.++.++|+|||.+....... ......|++.|+|||.+.+..++.++|+||+|+++|+|++|..||...+
T Consensus       143 p~Nil~---~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~  219 (285)
T cd06648         143 SDSILL---TSDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEP  219 (285)
T ss_pred             hhhEEE---cCCCcEEEcccccchhhccCCcccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCC
Confidence            999999   778899999999886543221 1233468999999999988889999999999999999999999998877


Q ss_pred             cHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCC
Q 009980          249 NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDS  306 (521)
Q Consensus       249 ~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~  306 (521)
                      .......+........ .....++..+.+|+.+||..+|++|||+.+++.|||+....
T Consensus       220 ~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~  276 (285)
T cd06648         220 PLQAMKRIRDNLPPKL-KNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAG  276 (285)
T ss_pred             HHHHHHHHHhcCCCCC-cccccCCHHHHHHHHHHcccChhhCcCHHHHccCcccccCC
Confidence            6666666655532222 12234789999999999999999999999999999997643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=100.00  E-value=3.5e-42  Score=351.90  Aligned_cols=252  Identities=29%  Similarity=0.448  Sum_probs=208.4

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      ..-..+++|.+.|.+|||+.||+|++..  .+..||+|.+-...                            ...-..+.
T Consensus        33 ~Vg~~~v~V~~vLAEGGFa~VYla~~~~--~~~~~AlKrm~~~d----------------------------e~~L~~v~   82 (738)
T KOG1989|consen   33 TVGSHRVTVEKVLAEGGFAQVYLAQDVK--GGKKYALKRMYVND----------------------------EEALNAVK   82 (738)
T ss_pred             EECCEEEEEEEEEccCCcEEEEEEEecC--CCceeeeeeeecCC----------------------------HHHHHHHH
Confidence            3445678899999999999999999987  55889999974321                            12235588


Q ss_pred             HHHHHHHHHhhccCCCCCccceeE-EEEe---C---CeEEEEEeccCCCchHHHHHh--cCCCCHHHHHHHHHHHHHHHH
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYD-VYED---Q---NGVHLILELCSGGELFDRIVA--QERYMEVGAAAVIRQIAEGLA  156 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~-~~~~---~---~~~~lv~e~~~gg~L~~~l~~--~~~~~~~~~~~i~~qil~al~  156 (521)
                      +||.+|++|    .+|||||.+++ ....   .   -.++|.||||.||.|.|++..  ..+|+|.++.+|+.+++.|+.
T Consensus        83 ~EI~~MK~L----~gh~nIV~yidss~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa  158 (738)
T KOG1989|consen   83 REIDIMKLL----SGHKNIVSYIDSSAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVA  158 (738)
T ss_pred             HHHHHHHHh----cCCCceeeEeccccccccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHH
Confidence            999999999    57999999999 3321   1   247899999999999999984  356999999999999999999


Q ss_pred             HHHHCC--CeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC-C---------cccccCCcccccccccc---cCCC
Q 009980          157 ALHQAN--IVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD-P---------VVGLFGSIDYVSPEALL---QDRI  221 (521)
Q Consensus       157 ~lH~~~--i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~---------~~~~~gt~~y~aPE~~~---~~~~  221 (521)
                      +||...  |+|||||-||||+   ..++..||||||.|....... .         .....-|+.|+|||++.   +.+.
T Consensus       159 ~mH~~~pPiIHRDLKiENvLl---s~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI  235 (738)
T KOG1989|consen  159 AMHYLKPPIIHRDLKIENVLL---SADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPI  235 (738)
T ss_pred             HHhcCCCccchhhhhhhheEE---cCCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCC
Confidence            999998  9999999999999   778899999999987432111 0         01124799999999874   6678


Q ss_pred             CchhhhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCC
Q 009980          222 TSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHP  300 (521)
Q Consensus       222 ~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~  300 (521)
                      +.|+|||||||+||-||....||.....    ..|..+.+.+|..  +.+|..+++||+.||+.||++||++.|++.+-
T Consensus       236 ~eKsDIWALGclLYkLCy~t~PFe~sg~----laIlng~Y~~P~~--p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~  308 (738)
T KOG1989|consen  236 GEKSDIWALGCLLYKLCYFTTPFEESGK----LAILNGNYSFPPF--PNYSDRLKDLIRTMLQPNPDERPNIYQVLEEI  308 (738)
T ss_pred             cchhHHHHHHHHHHHHHHhCCCcCcCcc----eeEEeccccCCCC--ccHHHHHHHHHHHHhccCcccCCCHHHHHHHH
Confidence            9999999999999999999999977643    3577888888764  67899999999999999999999999998653

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=100.00  E-value=2.8e-41  Score=328.92  Aligned_cols=259  Identities=27%  Similarity=0.457  Sum_probs=216.7

Q ss_pred             ccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEI   88 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   88 (521)
                      ...|.....||+|+||.||+|.+..  +++.||+|.+.....                            .....+.+|+
T Consensus        20 ~~~~~~~~~ig~g~~g~v~~~~~~~--~~~~v~iK~~~~~~~----------------------------~~~~~~~~e~   69 (297)
T cd06659          20 RSLLENYIKIGEGSTGIVCIAREKH--SGRQVAVKMMDLRKQ----------------------------QRRELLFNEV   69 (297)
T ss_pred             hhhHHhhhhcCCCCceeEEEEEEcC--CCCEEEEEEEEeccc----------------------------chHHHHHHHH
Confidence            4556667789999999999999987  778999999854221                            1234577899


Q ss_pred             HHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 009980           89 LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDL  168 (521)
Q Consensus        89 ~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dl  168 (521)
                      .+++.+     +||||+++++++..++..|+||||++|++|.+++.. ..+++..+..++.|++.||.|||++|++||||
T Consensus        70 ~~l~~l-----~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl  143 (297)
T cd06659          70 VIMRDY-----QHQNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ-TRLNEEQIATVCESVLQALCYLHSQGVIHRDI  143 (297)
T ss_pred             HHHHhC-----CCCchhhhhhheeeCCeEEEEEecCCCCCHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence            999988     999999999999999999999999999999886654 57899999999999999999999999999999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCccCCCCC-CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQ  247 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~  247 (521)
                      +|+||++   +.++.++|+|||++....... ......|++.|+|||.+.+..++.++||||+||++|+|++|+.||...
T Consensus       144 ~p~Nill---~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~  220 (297)
T cd06659         144 KSDSILL---TLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSD  220 (297)
T ss_pred             CHHHeEE---ccCCcEEEeechhHhhcccccccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence            9999999   778899999999986543221 223456899999999998888999999999999999999999999877


Q ss_pred             CcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCCC
Q 009980          248 SNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSA  307 (521)
Q Consensus       248 ~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~~  307 (521)
                      +..+....+...... ....+..++..+.++|.+||..+|.+|||+.++++||||..-..
T Consensus       221 ~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~~~  279 (297)
T cd06659         221 SPVQAMKRLRDSPPP-KLKNAHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQTGL  279 (297)
T ss_pred             CHHHHHHHHhccCCC-CccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhccCCC
Confidence            766655555443322 22234567899999999999999999999999999999986543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=100.00  E-value=5.8e-41  Score=319.78  Aligned_cols=246  Identities=28%  Similarity=0.449  Sum_probs=209.1

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ++|++.+.||+|+||.||+|..+.   +..+|+|.+....                             .....+.+|+.
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~---~~~~a~K~~~~~~-----------------------------~~~~~~~~e~~   51 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWRA---QIKVAIKAINEGA-----------------------------MSEEDFIEEAK   51 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEecc---CceEEEEecccCC-----------------------------ccHHHHHHHHH
Confidence            579999999999999999998764   4579999875321                             12345788999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQANIVHRDL  168 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dl  168 (521)
                      +++++     +||||+++++++...+..|+||||++||+|.+++.. .+.+++..+..++.|++.||.|||++||+||||
T Consensus        52 ~l~~l-----~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl  126 (256)
T cd05114          52 VMMKL-----SHPKLVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDL  126 (256)
T ss_pred             HHHHC-----CCCCceeEEEEEccCCCEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccccc
Confidence            99998     999999999999999999999999999999998875 356899999999999999999999999999999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCccCCCCCCc--ccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CCCCCC
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSSVEGYTDPV--VGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFI  245 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~pf~  245 (521)
                      ||+||++   +.++.++|+|||.++........  ....++..|+|||.+.+..++.++|+||+|+++|+|++ |++||.
T Consensus       127 ~p~ni~i---~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~  203 (256)
T cd05114         127 AARNCLV---SSTGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFE  203 (256)
T ss_pred             CcceEEE---cCCCeEEECCCCCccccCCCceeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCC
Confidence            9999999   67788999999998754322211  12235668999999988889999999999999999999 999999


Q ss_pred             CCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          246 AQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       246 ~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      ..+..+....+..+......   ...+..+.+++.+||..+|.+|||+.++++
T Consensus       204 ~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~li~~c~~~~p~~Rps~~~l~~  253 (256)
T cd05114         204 KKSNYEVVEMISRGFRLYRP---KLASMTVYEVMYSCWHEKPEGRPTFAELLR  253 (256)
T ss_pred             CCCHHHHHHHHHCCCCCCCC---CCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence            88888888887776543222   346889999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=100.00  E-value=1.8e-41  Score=329.17  Aligned_cols=259  Identities=23%  Similarity=0.362  Sum_probs=206.4

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ++|+..+.||+|+||.||++.+..  +++.||+|.+.+....                           .....+.+|+.
T Consensus         4 ~~~~~~~~lg~G~~g~vy~~~~~~--~~~~~aiK~~~~~~~~---------------------------~~~~~~~~e~~   54 (288)
T cd06616           4 EDLKDLGEIGRGAFGTVNKMLHKP--SGTIMAVKRIRSTVDE---------------------------KEQKRLLMDLD   54 (288)
T ss_pred             HHhHHHHHhCCCCceEEEEEEECC--CCCEEEEEEehhccCh---------------------------HHHHHHHHHHH
Confidence            467888999999999999999987  7889999998643211                           12345778988


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHH---HH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CC
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDR---IV--AQERYMEVGAAAVIRQIAEGLAALHQA-NI  163 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~---l~--~~~~~~~~~~~~i~~qil~al~~lH~~-~i  163 (521)
                      ++.++    .+||||+++++++..++..+++|||+.+ ++.++   +.  ....+++..+..++.|++.||+|||+. |+
T Consensus        55 ~l~~~----~~~~~iv~~~~~~~~~~~~~~~~e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i  129 (288)
T cd06616          55 VVMRS----SDCPYIVKFYGALFREGDCWICMELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKI  129 (288)
T ss_pred             HHHHh----cCCCCEeeeeeEEecCCcEEEEEecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCe
Confidence            88887    2499999999999999999999999865 55443   22  246799999999999999999999985 99


Q ss_pred             eeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccC---CCCchhhhHHHHHHHHHHHhC
Q 009980          164 VHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQD---RITSKSDMWSLGVILYILLSG  240 (521)
Q Consensus       164 ~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~~ll~g  240 (521)
                      +||||||+||++   +..+.++|+|||++.............|++.|+|||.+.+.   .++.++||||+||++|+|++|
T Consensus       130 ~H~dlkp~Nil~---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g  206 (288)
T cd06616         130 IHRDVKPSNILL---DRNGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATG  206 (288)
T ss_pred             eccCCCHHHEEE---ccCCcEEEeecchhHHhccCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhC
Confidence            999999999999   66788999999999754433333444689999999999765   688999999999999999999


Q ss_pred             CCCCCCCCcH-HHHHHHHcCCC-CCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCC
Q 009980          241 YPPFIAQSNR-QKQQMIMAGEF-SFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGD  305 (521)
Q Consensus       241 ~~pf~~~~~~-~~~~~i~~~~~-~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~  305 (521)
                      ++||...... +....+..+.. ......+..++.++.+|+.+||..+|++|||+.+++.||||...
T Consensus       207 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~~  273 (288)
T cd06616         207 KFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKDY  273 (288)
T ss_pred             CCCchhcchHHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhch
Confidence            9999765421 22222222221 22222234589999999999999999999999999999999753

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=100.00  E-value=7.3e-41  Score=325.37  Aligned_cols=256  Identities=26%  Similarity=0.410  Sum_probs=202.3

Q ss_pred             ccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEI   88 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   88 (521)
                      .++|++.+.||+|+||.||+|.++.  +++.||+|++......                           .....+.+|+
T Consensus         4 ~~~y~~~~~ig~g~~~~v~~~~~~~--~~~~~~iK~~~~~~~~---------------------------~~~~~~~~e~   54 (291)
T cd07870           4 ATSYLNLEKLGEGSYATVYKGISRI--NGQLVALKVISMKTEE---------------------------GVPFTAIREA   54 (291)
T ss_pred             cceeEEEEEEEecCCEEEEEEEEcC--CCcEEEEEEecccCcC---------------------------CCcHHHHHHH
Confidence            4789999999999999999999987  7789999998643211                           1122467899


Q ss_pred             HHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecc
Q 009980           89 LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQANIVHRD  167 (521)
Q Consensus        89 ~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~al~~lH~~~i~H~d  167 (521)
                      .+++.+     +||||+++++++..++..|+||||+. ++|.+.+.. ...+++..+..++.|++.||.|||++||+|+|
T Consensus        55 ~~l~~l-----~h~ni~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~d  128 (291)
T cd07870          55 SLLKGL-----KHANIVLLHDIIHTKETLTFVFEYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRD  128 (291)
T ss_pred             HHHHhc-----CCCCEeEEEEEEecCCeEEEEEeccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence            999998     99999999999999999999999996 577766654 35678899999999999999999999999999


Q ss_pred             CCCCcEEEeeCCCCCCEEEeecCCCccCCCCC-CcccccCCcccccccccccC-CCCchhhhHHHHHHHHHHHhCCCCCC
Q 009980          168 LKPENCLFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALLQD-RITSKSDMWSLGVILYILLSGYPPFI  245 (521)
Q Consensus       168 lkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~~ll~g~~pf~  245 (521)
                      |||+||++   +.++.++|+|||+++...... ......+++.|+|||.+.+. .++.++||||+||++|+|++|.+||.
T Consensus       129 lkp~Nil~---~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~  205 (291)
T cd07870         129 LKPQNLLI---SYLGELKLADFGLARAKSIPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFP  205 (291)
T ss_pred             CChHHEEE---cCCCcEEEeccccccccCCCCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence            99999999   677889999999987543221 22334578999999998753 57889999999999999999999997


Q ss_pred             CCCcH-HHHHHHHcCC--------------CC------------Cchhhhh--ccCHHHHHHHHHhccCCCCCCCCHHHH
Q 009980          246 AQSNR-QKQQMIMAGE--------------FS------------FYEQTWK--NISSSAKQLISSLLTVDPNRRPSAQEL  296 (521)
Q Consensus       246 ~~~~~-~~~~~i~~~~--------------~~------------~~~~~~~--~~s~~~~~li~~~l~~dp~~R~t~~~~  296 (521)
                      +.+.. +....+....              ..            .....|.  ..++.+.+++.+||..||.+|||+.++
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~  285 (291)
T cd07870         206 GVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDA  285 (291)
T ss_pred             CchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHH
Confidence            65432 1111111000              00            0001111  126789999999999999999999999


Q ss_pred             HcCCcc
Q 009980          297 LNHPWV  302 (521)
Q Consensus       297 l~h~~~  302 (521)
                      +.||||
T Consensus       286 l~h~~~  291 (291)
T cd07870         286 LLHPYF  291 (291)
T ss_pred             hcCCCC
Confidence            999997

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=8.8e-41  Score=324.09  Aligned_cols=260  Identities=24%  Similarity=0.374  Sum_probs=209.6

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ++|++.+.||.|++|.||+|.++.  +++.||+|.+......                           .....+.+|++
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~--~~~~~~~k~~~~~~~~---------------------------~~~~~~~~e~~   51 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCRLKN--TGMIFALKTITTDPNP---------------------------DLQKQILRELE   51 (287)
T ss_pred             CceEEEEEeccCCceEEEEEEECC--CCeEEEEEEEecCCch---------------------------HHHHHHHHHHH
Confidence            579999999999999999999987  7889999998643211                           12345788999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeC--CeEEEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQ--NGVHLILELCSGGELFDRIVA----QERYMEVGAAAVIRQIAEGLAALHQANI  163 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~--~~~~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qil~al~~lH~~~i  163 (521)
                      +++++     +||||+++++++.+.  +.+|+||||++|++|.+++..    ...+++..+..++.||+.||.|||+.|+
T Consensus        52 ~l~~l-----~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i  126 (287)
T cd06621          52 INKSC-----KSPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKI  126 (287)
T ss_pred             HHHhC-----CCCCeeeeeeEEEccCCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            99998     999999999998653  478999999999999887653    3458999999999999999999999999


Q ss_pred             eeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCC
Q 009980          164 VHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPP  243 (521)
Q Consensus       164 ~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~p  243 (521)
                      +|+||+|+||++   +.++.++|+|||++........ ....++..|+|||.+.+..++.++|+||+||++|+|++|..|
T Consensus       127 ~H~dl~~~nil~---~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p  202 (287)
T cd06621         127 IHRDIKPSNILL---TRKGQVKLCDFGVSGELVNSLA-GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFP  202 (287)
T ss_pred             ccCCCCHHHEEE---ecCCeEEEeecccccccccccc-ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            999999999999   6677899999999875443221 234578899999999888999999999999999999999999


Q ss_pred             CCCCC-----cHHHHHHHHcCCCCCchhhh---hccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCCC
Q 009980          244 FIAQS-----NRQKQQMIMAGEFSFYEQTW---KNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSA  307 (521)
Q Consensus       244 f~~~~-----~~~~~~~i~~~~~~~~~~~~---~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~~  307 (521)
                      |....     ..+....+............   ...++.+.+|+.+||..+|.+|||+.+++.|||++....
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~~  274 (287)
T cd06621         203 FPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQMK  274 (287)
T ss_pred             CCcccCCCCChHHHHHHHhcCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCcccccccc
Confidence            97652     23333333332211111110   124678999999999999999999999999999975544

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=100.00  E-value=3.2e-41  Score=357.90  Aligned_cols=253  Identities=23%  Similarity=0.375  Sum_probs=204.0

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ++|++.+.||+|+||.||+|+++.  +++.||||++.......                         ......+.+|+.
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~--tg~~VAIK~I~~~l~~~-------------------------e~~~~rflrEi~   54 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPV--CSRRVALKKIREDLSEN-------------------------PLLKKRFLREAK   54 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECC--CCcEEEEEEECcccccC-------------------------HHHHHHHHHHHH
Confidence            689999999999999999999987  78899999986432111                         122345788999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-----------CCCCHHHHHHHHHHHHHHHHHH
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-----------ERYMEVGAAAVIRQIAEGLAAL  158 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-----------~~~~~~~~~~i~~qil~al~~l  158 (521)
                      +++++     +||||+++++++.+++..|+||||++||+|.+++...           ...+...+..++.||+.||.||
T Consensus        55 ILs~L-----~HPNIVkl~~v~~d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yL  129 (932)
T PRK13184         55 IAADL-----IHPGIVPVYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYV  129 (932)
T ss_pred             HHHhC-----CCcCcCeEEEEEeeCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHH
Confidence            99998     9999999999999999999999999999999988641           2345667889999999999999


Q ss_pred             HHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC-------------------CcccccCCcccccccccccC
Q 009980          159 HQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD-------------------PVVGLFGSIDYVSPEALLQD  219 (521)
Q Consensus       159 H~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-------------------~~~~~~gt~~y~aPE~~~~~  219 (521)
                      |++||+||||||+||++   +.++.++|+|||+++......                   .....+||+.|+|||++.+.
T Consensus       130 Hs~GIIHRDLKPeNILL---d~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~  206 (932)
T PRK13184        130 HSKGVLHRDLKPDNILL---GLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGV  206 (932)
T ss_pred             HHCCccccCCchheEEE---cCCCCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCC
Confidence            99999999999999999   778889999999997541100                   11124699999999999999


Q ss_pred             CCCchhhhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          220 RITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       220 ~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      .++.++||||+||++|+|++|.+||................ +.....+..+|+.+.+++.+||..||++||+..+.+.
T Consensus       207 ~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~~~~~i~~-P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl  284 (932)
T PRK13184        207 PASESTDIYALGVILYQMLTLSFPYRRKKGRKISYRDVILS-PIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELK  284 (932)
T ss_pred             CCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhhhhhhccC-hhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            99999999999999999999999998755443322211111 1111223568999999999999999999987666554

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=5.1e-42  Score=285.70  Aligned_cols=259  Identities=25%  Similarity=0.429  Sum_probs=216.8

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ..|.-.++||+|.||+|++|+++.  +.+.||+|.++......-.                          .....+||-
T Consensus         2 ~~ydkmekigegtygtvfkarn~~--t~eivalkrvrlddddegv--------------------------pssalreic   53 (292)
T KOG0662|consen    2 QKYDKMEKIGEGTYGTVFKARNRE--THEIVALKRVRLDDDDEGV--------------------------PSSALREIC   53 (292)
T ss_pred             cchHHHHhhcCCcceeeEecccCC--ccceEEEEEEeccCCCCCC--------------------------cHHHHHHHH
Confidence            467778999999999999999998  8899999999765443211                          123678999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQANIVHRDL  168 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dl  168 (521)
                      +++.+     +|.|||+++++..+++.+.+|+|||.. +|..+... ++.+..+.++.++.|++.||.+||++++.|||+
T Consensus        54 llkel-----khknivrl~dvlhsdkkltlvfe~cdq-dlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdl  127 (292)
T KOG0662|consen   54 LLKEL-----KHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDL  127 (292)
T ss_pred             HHHHh-----hhcceeehhhhhccCceeEEeHHHhhH-HHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccC
Confidence            99999     999999999999999999999999965 77777654 677899999999999999999999999999999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCccCCCCCCc-ccccCCcccccccccccC-CCCchhhhHHHHHHHHHHHh-CCCCCC
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSSVEGYTDPV-VGLFGSIDYVSPEALLQD-RITSKSDMWSLGVILYILLS-GYPPFI  245 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~-~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~~ll~-g~~pf~  245 (521)
                      ||+|.++   +.++.+|++|||+|+-.+.+-.. ...+.|.+|.+|.++.+. -|+...|+||.|||+.|+.. |++.|.
T Consensus       128 kpqnlli---n~ngelkladfglarafgipvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfp  204 (292)
T KOG0662|consen  128 KPQNLLI---NRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFP  204 (292)
T ss_pred             CcceEEe---ccCCcEEecccchhhhcCCceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCC
Confidence            9999999   88999999999999876544322 334579999999998765 47899999999999999987 899999


Q ss_pred             CCCcHHHHHHHHcCCCCCchhhh-------------------------hccCHHHHHHHHHhccCCCCCCCCHHHHHcCC
Q 009980          246 AQSNRQKQQMIMAGEFSFYEQTW-------------------------KNISSSAKQLISSLLTVDPNRRPSAQELLNHP  300 (521)
Q Consensus       246 ~~~~~~~~~~i~~~~~~~~~~~~-------------------------~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~  300 (521)
                      +.+..+.+..|..-...+....|                         +.++..-+++++++|.-+|.+|++++.+|+||
T Consensus       205 g~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhp  284 (292)
T KOG0662|consen  205 GNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHP  284 (292)
T ss_pred             CCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCc
Confidence            99988888877653332222222                         23445578999999999999999999999999


Q ss_pred             cccCC
Q 009980          301 WVIGD  305 (521)
Q Consensus       301 ~~~~~  305 (521)
                      ||...
T Consensus       285 yf~d~  289 (292)
T KOG0662|consen  285 YFSDF  289 (292)
T ss_pred             ccccc
Confidence            99754

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1.9e-41  Score=336.93  Aligned_cols=268  Identities=28%  Similarity=0.453  Sum_probs=218.0

Q ss_pred             CCccccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCcccccccccccccc
Q 009980            1 MGQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVS   80 (521)
Q Consensus         1 ~~~~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (521)
                      |++....+.++|++.+.||+|++|.||+|++..  +++.||||++.......                          ..
T Consensus         6 ~~~~~~~~~~~y~~~~~ig~g~~g~vy~~~~~~--~~~~~aiK~~~~~~~~~--------------------------~~   57 (343)
T cd07851           6 LNKTVWEVPDRYQNLSPVGSGAYGQVCSAFDTK--TGRKVAIKKLSRPFQSA--------------------------IH   57 (343)
T ss_pred             hccceecccCceEEEEEeccCCceEEEEEEECC--CCcEEEEEecccccchh--------------------------hH
Confidence            345566788999999999999999999999987  78899999975421110                          11


Q ss_pred             HHHHHHHHHHHHHHhhccCCCCCccceeEEEEeCCe------EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHH
Q 009980           81 DALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNG------VHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG  154 (521)
Q Consensus        81 ~~~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~------~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~a  154 (521)
                      ...+.+|+.+++++     .||||+++++++...+.      .|+|+||+ |++|.+++.. .++++..+..++.|++.|
T Consensus        58 ~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~ql~~a  130 (343)
T cd07851          58 AKRTYRELRLLKHM-----DHENVIGLLDVFTPASSLEDFQDVYLVTHLM-GADLNNIVKC-QKLSDDHIQFLVYQILRG  130 (343)
T ss_pred             HHHHHHHHHHHHhc-----cCCCHHHHHHHhhccccccccccEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHH
Confidence            23467899999998     99999999998876654      89999999 6699888765 579999999999999999


Q ss_pred             HHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCccccccccccc-CCCCchhhhHHHHHH
Q 009980          155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQ-DRITSKSDMWSLGVI  233 (521)
Q Consensus       155 l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~i  233 (521)
                      |.|||++||+||||+|+||++   +.++.++|+|||++......  .....+++.|+|||.+.+ ..++.++||||+||+
T Consensus       131 L~~LH~~gi~H~dlkp~Nill---~~~~~~kL~dfg~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~  205 (343)
T cd07851         131 LKYIHSAGIIHRDLKPSNIAV---NEDCELKILDFGLARHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI  205 (343)
T ss_pred             HHHHHHCCeecCCCCHHHeEE---CCCCCEEEcccccccccccc--ccCCcccccccCHHHHhCCCCCCchHhHHHHHHH
Confidence            999999999999999999999   67788999999999865432  334468889999998865 367899999999999


Q ss_pred             HHHHHhCCCCCCCCCcHHHHHHHHcCCCCCch---------------------------hhhhccCHHHHHHHHHhccCC
Q 009980          234 LYILLSGYPPFIAQSNRQKQQMIMAGEFSFYE---------------------------QTWKNISSSAKQLISSLLTVD  286 (521)
Q Consensus       234 l~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~---------------------------~~~~~~s~~~~~li~~~l~~d  286 (521)
                      +|+|++|++||.+.........+.......+.                           ..+..+|+.+.++|.+||..+
T Consensus       206 l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~  285 (343)
T cd07851         206 MAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLD  285 (343)
T ss_pred             HHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCC
Confidence            99999999999887766555554432211110                           112346899999999999999


Q ss_pred             CCCCCCHHHHHcCCcccCCCCc
Q 009980          287 PNRRPSAQELLNHPWVIGDSAK  308 (521)
Q Consensus       287 p~~R~t~~~~l~h~~~~~~~~~  308 (521)
                      |.+|||+.+++.||||.....+
T Consensus       286 P~~Rpt~~ell~h~~~~~~~~~  307 (343)
T cd07851         286 PDKRITAAEALAHPYLAEYHDP  307 (343)
T ss_pred             hhhCCCHHHHhcCCCccccCCC
Confidence            9999999999999999865443

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=100.00  E-value=3.7e-41  Score=321.17  Aligned_cols=253  Identities=28%  Similarity=0.505  Sum_probs=214.4

Q ss_pred             ceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHH
Q 009980           11 EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILV   90 (521)
Q Consensus        11 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   90 (521)
                      +|++.+.||+|+||.||+|..+.  ++..||+|.+.......                          .....+.+|+.+
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~--~~~~~~ik~~~~~~~~~--------------------------~~~~~~~~E~~~   52 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKS--DSEHCVIKEIDLTKMPV--------------------------KEKEASKKEVIL   52 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcC--CCceEEEEEeeHhhccc--------------------------hhhHHHHHHHHH
Confidence            58999999999999999999987  77889999986532211                          123457789999


Q ss_pred             HHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 009980           91 MRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE--RYMEVGAAAVIRQIAEGLAALHQANIVHRDL  168 (521)
Q Consensus        91 l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~al~~lH~~~i~H~dl  168 (521)
                      ++++     +||||+++++.+...+..|+|+||+.+++|.+++....  .+++..+..++.|++.||.|||+.+++|+||
T Consensus        53 l~~~-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl  127 (257)
T cd08225          53 LAKM-----KHPNIVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDI  127 (257)
T ss_pred             HHhC-----CCCChhhhhheeccCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccC
Confidence            9998     99999999999999999999999999999999987643  4789999999999999999999999999999


Q ss_pred             CCCcEEEeeCCCC-CCEEEeecCCCccCCCCCC-cccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCC
Q 009980          169 KPENCLFLNDRED-SPLKIMDFGLSSVEGYTDP-VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIA  246 (521)
Q Consensus       169 kp~Nil~~~~~~~-~~~kl~Dfg~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~  246 (521)
                      +|+||++   +.+ ..++|+|||.+........ .....|++.|+|||.+.+..++.++|+||+|+++|+|++|..||..
T Consensus       128 ~~~nil~---~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~  204 (257)
T cd08225         128 KSQNIFL---SKNGMVAKLGDFGIARQLNDSMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEG  204 (257)
T ss_pred             CHHHEEE---cCCCCeEEecccccchhccCCcccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            9999999   444 4579999999876543322 2234589999999999888899999999999999999999999988


Q ss_pred             CCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcc
Q 009980          247 QSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV  302 (521)
Q Consensus       247 ~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~  302 (521)
                      .+..+....+..+.....   ...++..++++|.+||..+|++|||+.++++||||
T Consensus       205 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~  257 (257)
T cd08225         205 NNLHQLVLKICQGYFAPI---SPNFSRDLRSLISQLFKVSPRDRPSITSILKRPFL  257 (257)
T ss_pred             ccHHHHHHHHhcccCCCC---CCCCCHHHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence            777666666655543322   24578899999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=100.00  E-value=6.1e-41  Score=326.81  Aligned_cols=252  Identities=25%  Similarity=0.367  Sum_probs=206.6

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ++|++.+.||.|+||.||+|+.+.++....+|+|.++....                           ......+.+|+.
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~---------------------------~~~~~~~~~E~~   54 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFAS---------------------------ENDHRDFAGELE   54 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCC---------------------------HHHHHHHHHHHH
Confidence            68999999999999999999998744445678888753111                           011244778999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC----------------CCCHHHHHHHHHHHHH
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE----------------RYMEVGAAAVIRQIAE  153 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~----------------~~~~~~~~~i~~qil~  153 (521)
                      ++.++    .+||||+++++++...+.+|+||||+++++|.+++....                .+++..+..++.|++.
T Consensus        55 ~l~~l----~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~  130 (297)
T cd05089          55 VLCKL----GHHPNIINLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVAT  130 (297)
T ss_pred             HHHhh----cCCCchhheEEEEccCCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHH
Confidence            88887    369999999999999999999999999999999987542                4788999999999999


Q ss_pred             HHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHH
Q 009980          154 GLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVI  233 (521)
Q Consensus       154 al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i  233 (521)
                      ||.|||++||+||||||+||++   +.++.+||+|||++..............+..|+|||.+.+..++.++|||||||+
T Consensus       131 al~~lH~~~ivH~dlkp~Nill---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~i  207 (297)
T cd05089         131 GMQYLSEKQFIHRDLAARNVLV---GENLASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVL  207 (297)
T ss_pred             HHHHHHHCCcccCcCCcceEEE---CCCCeEEECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHH
Confidence            9999999999999999999999   6778899999999864322111111223557999999988889999999999999


Q ss_pred             HHHHHh-CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          234 LYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       234 l~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      +|+|++ |.+||.+.+..+....+..+....   ....++..+++|+.+||..+|.+|||++++++
T Consensus       208 l~el~t~g~~pf~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  270 (297)
T cd05089         208 LWEIVSLGGTPYCGMTCAELYEKLPQGYRME---KPRNCDDEVYELMRQCWRDRPYERPPFAQISV  270 (297)
T ss_pred             HHHHHcCCCCCCCCCCHHHHHHHHhcCCCCC---CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            999997 999999888777777666543221   22458899999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=100.00  E-value=3.9e-41  Score=334.58  Aligned_cols=263  Identities=28%  Similarity=0.419  Sum_probs=213.7

Q ss_pred             ccccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHH
Q 009980            3 QETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDA   82 (521)
Q Consensus         3 ~~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (521)
                      .+...+.++|++.+.||+|+||.||+|.+..  ++..||||.+.+....                          .....
T Consensus         8 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~--~~~~vavK~~~~~~~~--------------------------~~~~~   59 (343)
T cd07880           8 KTIWEVPDRYRDLKQVGSGAYGTVCSALDRR--TGAKVAIKKLYRPFQS--------------------------ELFAK   59 (343)
T ss_pred             hhhhccccceEEEEEeeecCCeEEEEEEECC--CCcEEEEEEecccccc--------------------------hHHHH
Confidence            4455688999999999999999999999987  7889999998542111                          11234


Q ss_pred             HHHHHHHHHHHHhhccCCCCCccceeEEEEeCC------eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 009980           83 LLTNEILVMRKIVENVSPHPNVIDLYDVYEDQN------GVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLA  156 (521)
Q Consensus        83 ~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~------~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~  156 (521)
                      .+.+|+.+++++     +||||+++++++....      .+++||||+ |++|.+++.. ..+++..+..++.||+.||.
T Consensus        60 ~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~-~~l~~~~~~~i~~qi~~al~  132 (343)
T cd07880          60 RAYRELRLLKHM-----KHENVIGLLDVFTPDLSLDRFHDFYLVMPFM-GTDLGKLMKH-EKLSEDRIQFLVYQMLKGLK  132 (343)
T ss_pred             HHHHHHHHHHhc-----CCCCccceeeeecCCccccccceEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHH
Confidence            577899999999     9999999999997654      468999999 7788877654 67999999999999999999


Q ss_pred             HHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCccccccccccc-CCCCchhhhHHHHHHHH
Q 009980          157 ALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQ-DRITSKSDMWSLGVILY  235 (521)
Q Consensus       157 ~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~  235 (521)
                      |||+.||+||||||+||++   +.++.++|+|||++.....  ......+++.|+|||.+.+ ..++.++|+||+|+++|
T Consensus       133 ~LH~~gi~H~dlkp~Nill---~~~~~~kl~dfg~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~  207 (343)
T cd07880         133 YIHAAGIIHRDLKPGNLAV---NEDCELKILDFGLARQTDS--EMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMA  207 (343)
T ss_pred             HHHhCCeecCCCCHHHEEE---cCCCCEEEeeccccccccc--CccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHH
Confidence            9999999999999999999   6778899999999986533  2234467899999999875 35789999999999999


Q ss_pred             HHHhCCCCCCCCCcHHHHHHHHcCCCCCc---------------------------hhhhhccCHHHHHHHHHhccCCCC
Q 009980          236 ILLSGYPPFIAQSNRQKQQMIMAGEFSFY---------------------------EQTWKNISSSAKQLISSLLTVDPN  288 (521)
Q Consensus       236 ~ll~g~~pf~~~~~~~~~~~i~~~~~~~~---------------------------~~~~~~~s~~~~~li~~~l~~dp~  288 (521)
                      +|++|.+||.+.+.......+.......+                           ...+..+++.+.++|.+||..||.
T Consensus       208 ~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~  287 (343)
T cd07880         208 EMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAE  287 (343)
T ss_pred             HHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChh
Confidence            99999999987765544443332211111                           112346788999999999999999


Q ss_pred             CCCCHHHHHcCCcccCC
Q 009980          289 RRPSAQELLNHPWVIGD  305 (521)
Q Consensus       289 ~R~t~~~~l~h~~~~~~  305 (521)
                      +|||+.+++.||||...
T Consensus       288 ~R~t~~~~l~~~~~~~~  304 (343)
T cd07880         288 SRITAAEALAHPYFEEF  304 (343)
T ss_pred             hCCCHHHHhcCccHhhh
Confidence            99999999999999754

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=100.00  E-value=2.2e-41  Score=329.07  Aligned_cols=258  Identities=28%  Similarity=0.453  Sum_probs=214.4

Q ss_pred             cccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      ..++|++.+.||+|+||.||+|.+..  +++.||+|.+.....                            .....+.+|
T Consensus        17 ~~~~~~~~~~lg~g~~g~v~~~~~~~--~~~~v~iK~~~~~~~----------------------------~~~~~~~~e   66 (293)
T cd06647          17 PKKKYTRFEKIGQGASGTVYTAIDVA--TGQEVAIKQMNLQQQ----------------------------PKKELIINE   66 (293)
T ss_pred             chhhceeeeEecCCCCeEEEEEEEcC--CCCEEEEEEeccccc----------------------------hHHHHHHHH
Confidence            35799999999999999999999877  678899999853211                            123457889


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecc
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRD  167 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~d  167 (521)
                      +.+++++     +||||+++++++...+..|+|+||++|++|.+++.. ..+++..+..++.|++.||.|||++|++|+|
T Consensus        67 ~~~l~~l-----~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~l~~al~~LH~~gi~H~d  140 (293)
T cd06647          67 ILVMREN-----KHPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRD  140 (293)
T ss_pred             HHHHhhc-----CCCCeeehhheeeeCCcEEEEEecCCCCcHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCEeecc
Confidence            9999988     999999999999999999999999999999998865 4588999999999999999999999999999


Q ss_pred             CCCCcEEEeeCCCCCCEEEeecCCCccCCCCC-CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCC
Q 009980          168 LKPENCLFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIA  246 (521)
Q Consensus       168 lkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~  246 (521)
                      |+|+||++   +.++.++|+|||++....... ......|++.|+|||.+.+..++.++|+||+|+++|++++|+.||..
T Consensus       141 L~p~Nili---~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~  217 (293)
T cd06647         141 IKSDNILL---GMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLN  217 (293)
T ss_pred             CCHHHEEE---cCCCCEEEccCcceecccccccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            99999999   667889999999886543322 22334688999999999888899999999999999999999999987


Q ss_pred             CCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCC
Q 009980          247 QSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGD  305 (521)
Q Consensus       247 ~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~  305 (521)
                      .+.......+..... .....+..++..++++|.+||..+|++||++.+++.||||...
T Consensus       218 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~  275 (293)
T cd06647         218 ENPLRALYLIATNGT-PELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIA  275 (293)
T ss_pred             CChhhheeehhcCCC-CCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcC
Confidence            665443333322211 1112234578899999999999999999999999999999743

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=100.00  E-value=5.3e-41  Score=322.11  Aligned_cols=252  Identities=25%  Similarity=0.415  Sum_probs=208.5

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ++|++.+.||+|+||.||+|+++.  +++.||||.+.......                         ......+.+|+.
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~--~~~~~~iK~~~~~~~~~-------------------------~~~~~~~~~e~~   54 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLL--DRKPVALKKVQIFEMMD-------------------------AKARQDCVKEID   54 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeC--CCCEEEEEEeeccccCC-------------------------HHHHHHHHHHHH
Confidence            689999999999999999999987  78899999886432211                         112345778999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA----QERYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      +++.+     +||||+++++++.+.+..|+||||+++++|.+++..    ...+++..+..++.|++.||.|||++|++|
T Consensus        55 ~l~~l-----~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H  129 (267)
T cd08228          55 LLKQL-----NHPNVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMH  129 (267)
T ss_pred             HHHhC-----CCcceeeeeeeEEECCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeC
Confidence            99998     999999999999999999999999999999888753    345899999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC-cccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCC
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP-VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF  244 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf  244 (521)
                      +||||+||++   +.++.++|+|||++........ .....|++.|+|||.+.+..++.++|+||+|+++|+|++|..||
T Consensus       130 ~dl~~~nil~---~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~  206 (267)
T cd08228         130 RDIKPANVFI---TATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPF  206 (267)
T ss_pred             CCCCHHHEEE---cCCCCEEECccccceeccchhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCC
Confidence            9999999999   6678899999999876543221 22346889999999998888999999999999999999999999


Q ss_pred             CCCCc--HHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          245 IAQSN--RQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       245 ~~~~~--~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      .....  ......+.....  +......++..+.+++.+||..+|++|||+.++++
T Consensus       207 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~  260 (267)
T cd08228         207 YGDKMNLFSLCQKIEQCDY--PPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQ  260 (267)
T ss_pred             ccccccHHHHHHHHhcCCC--CCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHH
Confidence            65532  334444443332  22223457889999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=100.00  E-value=2.8e-41  Score=329.97  Aligned_cols=254  Identities=25%  Similarity=0.352  Sum_probs=205.8

Q ss_pred             ccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEI   88 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   88 (521)
                      .++|++.+.||+|+||.||+|.++.++....+|+|.+.....                           ......+.+|+
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~---------------------------~~~~~~~~~Ei   58 (303)
T cd05088           6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS---------------------------KDDHRDFAGEL   58 (303)
T ss_pred             hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCC---------------------------HHHHHHHHHHH
Confidence            358999999999999999999998733334567777642111                           11234577899


Q ss_pred             HHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC----------------CCCHHHHHHHHHHHH
Q 009980           89 LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE----------------RYMEVGAAAVIRQIA  152 (521)
Q Consensus        89 ~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~----------------~~~~~~~~~i~~qil  152 (521)
                      .++.++    .+||||+++++++...+.+|+||||++|++|.+++...+                .+++..+..++.||+
T Consensus        59 ~~l~~l----~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~  134 (303)
T cd05088          59 EVLCKL----GHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA  134 (303)
T ss_pred             HHHHHh----cCCCCcceEEEEECCCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHH
Confidence            988887    479999999999999999999999999999999987543                478999999999999


Q ss_pred             HHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHH
Q 009980          153 EGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGV  232 (521)
Q Consensus       153 ~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~  232 (521)
                      .||+|||++|++||||||+|||+   +.++.+||+|||++.............+++.|+|||.+.+..++.++||||+||
T Consensus       135 ~al~~LH~~gi~H~dlkp~Nili---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~  211 (303)
T cd05088         135 RGMDYLSQKQFIHRDLAARNILV---GENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGV  211 (303)
T ss_pred             HHHHHHHhCCccccccchheEEe---cCCCcEEeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhh
Confidence            99999999999999999999999   677889999999986432111111223466799999998888999999999999


Q ss_pred             HHHHHHh-CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          233 ILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       233 il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      ++|+|+| |.+||.+.+..+....+..+. .  ...+..+++.+.+|+.+||..+|++|||+.+++.+
T Consensus       212 il~ellt~g~~p~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  276 (303)
T cd05088         212 LLWEIVSLGGTPYCGMTCAELYEKLPQGY-R--LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  276 (303)
T ss_pred             HHHHHHhcCCCCcccCChHHHHHHHhcCC-c--CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            9999998 999998877776666554432 1  11224578999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=100.00  E-value=8e-41  Score=318.78  Aligned_cols=253  Identities=30%  Similarity=0.507  Sum_probs=218.8

Q ss_pred             ceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHH
Q 009980           11 EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILV   90 (521)
Q Consensus        11 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   90 (521)
                      +|++.+.||.|+||.||+|.+..  +++.||+|++......                          ......+.+|++.
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~--~~~~~~ik~~~~~~~~--------------------------~~~~~~~~~e~~~   52 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKS--DGKLYVLKEIDLSNMS--------------------------EKEREDALNEVKI   52 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcC--CCcEEEEEEeecccCC--------------------------hHHHHHHHHHHHH
Confidence            58999999999999999999987  7889999998653221                          1223457889999


Q ss_pred             HHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 009980           91 MRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ----ERYMEVGAAAVIRQIAEGLAALHQANIVHR  166 (521)
Q Consensus        91 l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~----~~~~~~~~~~i~~qil~al~~lH~~~i~H~  166 (521)
                      ++++     +|||++++++.+......++|+||++|++|.+++...    ..+++..+..++.|++.||.|||++|++|+
T Consensus        53 l~~l-----~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~  127 (258)
T cd08215          53 LKKL-----NHPNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHR  127 (258)
T ss_pred             HHhc-----CCCChhheEEEEecCCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecc
Confidence            9998     8999999999999999999999999999999998764    679999999999999999999999999999


Q ss_pred             cCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC-CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCC
Q 009980          167 DLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFI  245 (521)
Q Consensus       167 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~  245 (521)
                      ||+|+||++   +.++.++|+|||.+....... ......|++.|+|||.+.+..++.++|+||+|+++|+|++|..||.
T Consensus       128 dl~~~nil~---~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~  204 (258)
T cd08215         128 DIKPQNIFL---TSNGLVKLGDFGISKVLSSTVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFE  204 (258)
T ss_pred             cCChHHeEE---cCCCcEEECCccceeecccCcceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCC
Confidence            999999999   667889999999997654332 2233468999999999988889999999999999999999999998


Q ss_pred             CCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcc
Q 009980          246 AQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV  302 (521)
Q Consensus       246 ~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~  302 (521)
                      ..+..+.............   ...++..+.+++.+||..+|++|||+.++|+||||
T Consensus       205 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~  258 (258)
T cd08215         205 GENLLELALKILKGQYPPI---PSQYSSELRNLVSSLLQKDPEERPSIAQILQSPFI  258 (258)
T ss_pred             CCcHHHHHHHHhcCCCCCC---CCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence            8877777776666543322   23678999999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-42  Score=303.69  Aligned_cols=251  Identities=29%  Similarity=0.408  Sum_probs=204.6

Q ss_pred             ccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEI   88 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   88 (521)
                      .++|+|.+.||.|||+.||++++..  +++.||+|.+.....                            .......+|+
T Consensus        20 ~~Ryri~~~LgeGGfsfv~LV~~~s--~~~~YAlKkI~c~~~----------------------------~~~e~~~rEi   69 (302)
T KOG2345|consen   20 NKRYRIQRLLGEGGFSFVDLVKGLS--TGHLYALKKILCHSQ----------------------------EDIEEALREI   69 (302)
T ss_pred             CceEEEeeeecCCCceeeeeecccC--cccchhhheeeccch----------------------------HHHHHHHHHH
Confidence            4699999999999999999999888  888999999865331                            2345578999


Q ss_pred             HHHHHHhhccCCCCCccceeEEEEe-----CCeEEEEEeccCCCchHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH
Q 009980           89 LVMRKIVENVSPHPNVIDLYDVYED-----QNGVHLILELCSGGELFDRIVAQ----ERYMEVGAAAVIRQIAEGLAALH  159 (521)
Q Consensus        89 ~~l~~l~~~~~~hpniv~~~~~~~~-----~~~~~lv~e~~~gg~L~~~l~~~----~~~~~~~~~~i~~qil~al~~lH  159 (521)
                      ...+++     +|||+++++++...     ....||+++|...|+|.+.+...    ..++|.++..|+.+|++||.+||
T Consensus        70 d~~rkf-----~s~~vl~l~dh~l~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH  144 (302)
T KOG2345|consen   70 DNHRKF-----NSPNVLRLVDHQLREEKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALH  144 (302)
T ss_pred             HHHHhh-----CCcchHHHHHHHHHhhccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHh
Confidence            999999     99999999987633     34599999999999999988643    36999999999999999999999


Q ss_pred             HCC--CeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC----------CcccccCCcccccccccccC---CCCch
Q 009980          160 QAN--IVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD----------PVVGLFGSIDYVSPEALLQD---RITSK  224 (521)
Q Consensus       160 ~~~--i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~----------~~~~~~gt~~y~aPE~~~~~---~~~~~  224 (521)
                      +..  ++||||||.||++   ...+.++|+|||.++...-.-          ....-..|..|+|||.+.-+   ..+.+
T Consensus       145 ~~~~~yAH~DiKP~NILl---s~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~er  221 (302)
T KOG2345|consen  145 EKEPPYAHRDIKPANILL---SDSGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITER  221 (302)
T ss_pred             ccCCcccccCCCcceeEe---cCCCceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccc
Confidence            999  9999999999999   557889999999997643211          11123468889999998743   45789


Q ss_pred             hhhHHHHHHHHHHHhCCCCCCCCC--cHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          225 SDMWSLGVILYILLSGYPPFIAQS--NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       225 ~DiwslG~il~~ll~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      +|||||||+||.|+.|.-||...-  ...+...+.++.+.+|..  ..+|..+.++|+.||++||.+||++.+++.+
T Consensus       222 tDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~n~q~s~P~~--~~yse~l~~lik~mlqvdP~qRP~i~~ll~~  296 (302)
T KOG2345|consen  222 TDIWSLGCTLYAMMFGESPFERIYQQGGSLALAVQNAQISIPNS--SRYSEALHQLIKSMLQVDPNQRPTIPELLSK  296 (302)
T ss_pred             cchhhhhHHHHHHHHcCCcchHHhhcCCeEEEeeeccccccCCC--CCccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence            999999999999999999994321  112223345556666654  3389999999999999999999999999874

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=100.00  E-value=2.3e-41  Score=335.06  Aligned_cols=260  Identities=30%  Similarity=0.452  Sum_probs=217.0

Q ss_pred             ceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHH
Q 009980           11 EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILV   90 (521)
Q Consensus        11 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   90 (521)
                      +|++.+.||.|++|.||+|++..  +++.||||.+.+....                          ......+.+|+.+
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~--~~~~~~iK~~~~~~~~--------------------------~~~~~~~~~e~~~   52 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKR--TGRKVAIKKISNVFDD--------------------------LIDAKRILREIKL   52 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCC--CCcEEEEEeecccccc--------------------------chhhhhHHHHHHH
Confidence            69999999999999999999987  7889999998643210                          1223457889999


Q ss_pred             HHHHhhccCCCCCccceeEEEEeCC-----eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           91 MRKIVENVSPHPNVIDLYDVYEDQN-----GVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        91 l~~l~~~~~~hpniv~~~~~~~~~~-----~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      ++++     +||||+++++++....     .+|+||||+.+ +|.+.+.....+++..+..++.||+.||.|||++||+|
T Consensus        53 l~~l-----~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H  126 (330)
T cd07834          53 LRHL-----RHENIIGLLDILRPPSPEDFNDVYIVTELMET-DLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIH  126 (330)
T ss_pred             HHhc-----CCcchhhhhhhhcccCcccccceEEEecchhh-hHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence            9998     8999999999998775     79999999975 89999888788999999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC----CcccccCCcccccccccccC-CCCchhhhHHHHHHHHHHHhC
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD----PVVGLFGSIDYVSPEALLQD-RITSKSDMWSLGVILYILLSG  240 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~~ll~g  240 (521)
                      |||||+||++   +.++.++|+|||++.......    ......+++.|+|||.+.+. .++.++|+||+|+++|+|++|
T Consensus       127 ~dlkp~nili---~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g  203 (330)
T cd07834         127 RDLKPSNILV---NSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTR  203 (330)
T ss_pred             CCCCHHHEEE---cCCCCEEEcccCceEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcC
Confidence            9999999999   677899999999998654432    23345688999999999877 789999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHHcCCCCCchh---------------------------hhhccCHHHHHHHHHhccCCCCCCCCH
Q 009980          241 YPPFIAQSNRQKQQMIMAGEFSFYEQ---------------------------TWKNISSSAKQLISSLLTVDPNRRPSA  293 (521)
Q Consensus       241 ~~pf~~~~~~~~~~~i~~~~~~~~~~---------------------------~~~~~s~~~~~li~~~l~~dp~~R~t~  293 (521)
                      .+||.+.+..+....+......+...                           ..+.+++.+.++|.+||+.+|.+|||+
T Consensus       204 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~  283 (330)
T cd07834         204 KPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITA  283 (330)
T ss_pred             CCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCH
Confidence            99998887766655554422211111                           123478899999999999999999999


Q ss_pred             HHHHcCCcccCCCC
Q 009980          294 QELLNHPWVIGDSA  307 (521)
Q Consensus       294 ~~~l~h~~~~~~~~  307 (521)
                      .+++.||||.+...
T Consensus       284 ~~ll~~~~~~~~~~  297 (330)
T cd07834         284 DEALAHPYLAQLHD  297 (330)
T ss_pred             HHHHhCccHHhhcc
Confidence            99999999975443

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=100.00  E-value=8.3e-41  Score=324.41  Aligned_cols=251  Identities=25%  Similarity=0.374  Sum_probs=210.6

Q ss_pred             ccceeecccccccCceEEEEeEEcc---CCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKT---CGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~---~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      .++|.+.+.||+|+||.||+|.+..   ..++..+|+|.+.....                            .....+.
T Consensus         4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~----------------------------~~~~~~~   55 (288)
T cd05093           4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASD----------------------------NARKDFH   55 (288)
T ss_pred             hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCH----------------------------HHHHHHH
Confidence            3579999999999999999998643   12456799998853211                            1234578


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC-------------CCCHHHHHHHHHHHH
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE-------------RYMEVGAAAVIRQIA  152 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-------------~~~~~~~~~i~~qil  152 (521)
                      +|+.+++++     .||||+++++++...+.+|+||||+.+++|.+++...+             .+++..+..++.|++
T Consensus        56 ~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~  130 (288)
T cd05093          56 REAELLTNL-----QHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIA  130 (288)
T ss_pred             HHHHHHHhC-----CCCCcceEEEEEecCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHH
Confidence            899999998     99999999999999999999999999999999987543             489999999999999


Q ss_pred             HHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC---cccccCCcccccccccccCCCCchhhhHH
Q 009980          153 EGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALLQDRITSKSDMWS  229 (521)
Q Consensus       153 ~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Diws  229 (521)
                      .||.|||++|++||||||+||++   +.++.++|+|||++........   .....+++.|+|||.+.+..++.++|+||
T Consensus       131 ~aL~~lH~~~i~H~dlkp~Nili---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiws  207 (288)
T cd05093         131 AGMVYLASQHFVHRDLATRNCLV---GENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWS  207 (288)
T ss_pred             HHHHHHHhCCeeecccCcceEEE---ccCCcEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHH
Confidence            99999999999999999999999   7788999999999975432211   12234577899999999888999999999


Q ss_pred             HHHHHHHHHh-CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          230 LGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       230 lG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      |||++|+|++ |.+||......+....+..+.....   ...+++++.+++.+||+.||.+|||+.+++.
T Consensus       208 lG~il~~l~t~g~~p~~~~~~~~~~~~i~~~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~  274 (288)
T cd05093         208 LGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQR---PRTCPKEVYDLMLGCWQREPHMRLNIKEIHS  274 (288)
T ss_pred             HHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCcCCC---CCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            9999999998 9999988887777777777654322   2357899999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=100.00  E-value=7.3e-41  Score=322.94  Aligned_cols=255  Identities=28%  Similarity=0.385  Sum_probs=209.6

Q ss_pred             ccccceeecccccccCceEEEEeEEcc---CCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKT---CGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDAL   83 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~---~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (521)
                      ...++|++.+.||+|+||.||+|.++.   ..++..||||.+.....                           ......
T Consensus         3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~---------------------------~~~~~~   55 (277)
T cd05062           3 VAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAAS---------------------------MRERIE   55 (277)
T ss_pred             ccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCC---------------------------HHHHHH
Confidence            456889999999999999999998753   12456799998753211                           012334


Q ss_pred             HHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC----------CCCHHHHHHHHHHHHH
Q 009980           84 LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE----------RYMEVGAAAVIRQIAE  153 (521)
Q Consensus        84 ~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~----------~~~~~~~~~i~~qil~  153 (521)
                      +.+|+.+++.+     +||||+++++++......++||||+++++|.+++....          .++...+..++.|++.
T Consensus        56 ~~~e~~~l~~l-----~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  130 (277)
T cd05062          56 FLNEASVMKEF-----NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIAD  130 (277)
T ss_pred             HHHHHHHHHhC-----CCCCeeeEEEEEcCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHH
Confidence            77899999988     99999999999999999999999999999999986532          3567788999999999


Q ss_pred             HHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC---cccccCCcccccccccccCCCCchhhhHHH
Q 009980          154 GLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALLQDRITSKSDMWSL  230 (521)
Q Consensus       154 al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl  230 (521)
                      ||.|||+.|++||||||+||++   +.++.++|+|||+++.......   .....+++.|+|||.+.+..++.++|||||
T Consensus       131 ~l~~lH~~~~vH~dlkp~Nil~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl  207 (277)
T cd05062         131 GMAYLNANKFVHRDLAARNCMV---AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF  207 (277)
T ss_pred             HHHHHHHCCcccCCcchheEEE---cCCCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHH
Confidence            9999999999999999999999   6778899999999875432211   112345778999999998889999999999


Q ss_pred             HHHHHHHHh-CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          231 GVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       231 G~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      ||++|+|++ |.+||.+.+..+....+..+.....   ...++..+++++.+||+.||++|||+.+++++
T Consensus       208 G~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  274 (277)
T cd05062         208 GVVLWEIATLAEQPYQGMSNEQVLRFVMEGGLLDK---PDNCPDMLFELMRMCWQYNPKMRPSFLEIISS  274 (277)
T ss_pred             HHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCC---CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            999999999 7999988887777776666544322   24578899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=100.00  E-value=4.9e-41  Score=321.69  Aligned_cols=250  Identities=32%  Similarity=0.517  Sum_probs=215.3

Q ss_pred             ccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHHhhc
Q 009980           18 LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVEN   97 (521)
Q Consensus        18 lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~   97 (521)
                      ||.|+||.||+|++..  +++.||+|++.......                         ......+.+|+.+++++   
T Consensus         1 lg~g~~~~vy~~~~~~--~~~~~~~k~~~~~~~~~-------------------------~~~~~~~~~e~~~l~~~---   50 (265)
T cd05579           1 ISKGAYGRVFLAKKKS--TGDIYAIKVIKKADMIR-------------------------KNQVDQVLTERDILSQA---   50 (265)
T ss_pred             CCCCCceEEEEEEECC--CCCEEEEEEecchhhhh-------------------------hhHHHHHHHHHHHHHhC---
Confidence            6899999999999987  78899999986532211                         11234578899999998   


Q ss_pred             cCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEee
Q 009980           98 VSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLN  177 (521)
Q Consensus        98 ~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~~~  177 (521)
                        +||||+++++.+...+..|+||||+.|++|.+++...+.+++..+..++.||+.||.|||++|++|+||+|+||++  
T Consensus        51 --~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~--  126 (265)
T cd05579          51 --QSPYVVKLYYSFQGKKNLYLVMEYLPGGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILI--  126 (265)
T ss_pred             --CCcchhHHHHheecCcEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEE--
Confidence              8999999999999999999999999999999999887889999999999999999999999999999999999999  


Q ss_pred             CCCCCCEEEeecCCCccCCCCC---------CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCC
Q 009980          178 DREDSPLKIMDFGLSSVEGYTD---------PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQS  248 (521)
Q Consensus       178 ~~~~~~~kl~Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~  248 (521)
                       +.++.++|+|||++.......         ......+++.|+|||.+....++.++|+||||+++|+|++|..||....
T Consensus       127 -~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~  205 (265)
T cd05579         127 -DSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGET  205 (265)
T ss_pred             -cCCCCEEEEecccchhcccCcccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC
Confidence             778899999999987543221         1223467889999999988888999999999999999999999999888


Q ss_pred             cHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCH---HHHHcCCcccC
Q 009980          249 NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSA---QELLNHPWVIG  304 (521)
Q Consensus       249 ~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~---~~~l~h~~~~~  304 (521)
                      ..+....+..+...++..  ..++..+.+++.+||+.+|.+|||+   .++|+||||+.
T Consensus       206 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~  262 (265)
T cd05579         206 PEEIFQNILNGKIEWPED--VEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKG  262 (265)
T ss_pred             HHHHHHHHhcCCcCCCcc--ccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccC
Confidence            888887777766554432  2358999999999999999999999   99999999974

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=100.00  E-value=1.2e-40  Score=317.84  Aligned_cols=245  Identities=26%  Similarity=0.387  Sum_probs=203.6

Q ss_pred             ccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHHh
Q 009980           16 DILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIV   95 (521)
Q Consensus        16 ~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~   95 (521)
                      +.||+|+||.||+|..+..+++..+|+|++......                          ......+.+|+.+++.+ 
T Consensus         1 ~~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~--------------------------~~~~~~~~~e~~~l~~l-   53 (257)
T cd05116           1 GELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNND--------------------------PALKDELLREANVMQQL-   53 (257)
T ss_pred             CcCCCcCCcceEEeEEecCCCceEEEEEEccCCCCc--------------------------HHHHHHHHHHHHHHHhC-
Confidence            368999999999997655447789999998532211                          11234578899999998 


Q ss_pred             hccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q 009980           96 ENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLF  175 (521)
Q Consensus        96 ~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~  175 (521)
                          +||||+++++++. ....++||||+.+++|.+++.....+++..+..++.|++.||.|||++||+||||||.||++
T Consensus        54 ----~h~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill  128 (257)
T cd05116          54 ----DNPYIVRMIGICE-AESWMLVMELAELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLL  128 (257)
T ss_pred             ----CCCCcceEEEEEc-CCCcEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEE
Confidence                9999999999875 45678999999999999999888889999999999999999999999999999999999999


Q ss_pred             eeCCCCCCEEEeecCCCccCCCCCC----cccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCCcH
Q 009980          176 LNDREDSPLKIMDFGLSSVEGYTDP----VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNR  250 (521)
Q Consensus       176 ~~~~~~~~~kl~Dfg~a~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~  250 (521)
                         +.++.+||+|||++........    .....+++.|+|||.+....++.++|+|||||++|+|++ |.+||.+.+..
T Consensus       129 ---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~  205 (257)
T cd05116         129 ---VTQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN  205 (257)
T ss_pred             ---cCCCeEEECCCccccccCCCCCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence               6678899999999976543221    112234678999999988889999999999999999998 99999888777


Q ss_pred             HHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          251 QKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       251 ~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      +....+..+....   ....++++++++|.+||+.||++|||+.++..
T Consensus       206 ~~~~~i~~~~~~~---~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~  250 (257)
T cd05116         206 EVTQMIESGERME---CPQRCPPEMYDLMKLCWTYGVDERPGFAVVEL  250 (257)
T ss_pred             HHHHHHHCCCCCC---CCCCCCHHHHHHHHHHhccCchhCcCHHHHHH
Confidence            7777777654321   22468999999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=100.00  E-value=8.7e-41  Score=331.46  Aligned_cols=276  Identities=28%  Similarity=0.416  Sum_probs=216.8

Q ss_pred             cccccceee-cccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCcccccccccc--ccccHH
Q 009980            6 RKLTDEYEV-TDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQ--VSVSDA   82 (521)
Q Consensus         6 ~~~~~~Y~~-~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~   82 (521)
                      ..+.++|.. .+.||.|+||+||+|.++.  +++.||||.+..........                .....  ......
T Consensus         4 ~~~~~ry~~~~~~ig~G~~g~vy~~~~~~--~~~~vaiK~~~~~~~~~~~~----------------~~~~~~~~~~~~~   65 (335)
T PTZ00024          4 FSISERYIQKGAHLGEGTYGKVEKAYDTL--TGKIVAIKKVKIIEISNDVT----------------KDRQLVGMCGIHF   65 (335)
T ss_pred             cccccchhhhhhcccCCCceeEEEEEECC--CCCeEEEEEeeccccccccc----------------cchhhhcccccch
Confidence            356788875 5779999999999999987  78899999986543221000                00000  001122


Q ss_pred             HHHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 009980           83 LLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQAN  162 (521)
Q Consensus        83 ~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~  162 (521)
                      .+.+|+.+++++     +||||+++++++...+..|+||||+. |+|.+++.....+++..+..++.|++.||.|||++|
T Consensus        66 ~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~  139 (335)
T PTZ00024         66 TTLRELKIMNEI-----KHENIMGLVDVYVEGDFINLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWY  139 (335)
T ss_pred             hHHHHHHHHHhC-----CCcceeeeeEEEecCCcEEEEEeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            467899999998     99999999999999999999999997 589999988888999999999999999999999999


Q ss_pred             CeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCC---------------CCCcccccCCcccccccccccC-CCCchhh
Q 009980          163 IVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGY---------------TDPVVGLFGSIDYVSPEALLQD-RITSKSD  226 (521)
Q Consensus       163 i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~---------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~D  226 (521)
                      ++|+||+|+||++   +.++.++|+|||++.....               ........+++.|+|||.+.+. .++.++|
T Consensus       140 i~H~dl~~~nill---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~D  216 (335)
T PTZ00024        140 FMHRDLSPANIFI---NSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVD  216 (335)
T ss_pred             eecccccHHHeEE---CCCCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHH
Confidence            9999999999999   6778999999999875431               1112233578899999998754 4689999


Q ss_pred             hHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHcCCCCCch------------------------hhhhccCHHHHHHHHHh
Q 009980          227 MWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYE------------------------QTWKNISSSAKQLISSL  282 (521)
Q Consensus       227 iwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~------------------------~~~~~~s~~~~~li~~~  282 (521)
                      +||+||++|+|++|.+||.+.+..+....+.........                        ......+..+.++|.+|
T Consensus       217 v~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  296 (335)
T PTZ00024        217 MWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSL  296 (335)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHH
Confidence            999999999999999999888766655444331110000                        11234688899999999


Q ss_pred             ccCCCCCCCCHHHHHcCCcccCCCCc
Q 009980          283 LTVDPNRRPSAQELLNHPWVIGDSAK  308 (521)
Q Consensus       283 l~~dp~~R~t~~~~l~h~~~~~~~~~  308 (521)
                      |..+|++|||++++|.||||......
T Consensus       297 l~~~P~~R~s~~~~l~~~~~~~~~~~  322 (335)
T PTZ00024        297 LKLNPLERISAKEALKHEYFKSDPLP  322 (335)
T ss_pred             cCCCchhccCHHHHhcCcccCCCCCC
Confidence            99999999999999999999876543

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=100.00  E-value=1.3e-40  Score=322.94  Aligned_cols=261  Identities=27%  Similarity=0.381  Sum_probs=212.2

Q ss_pred             ccccceeecccccccCceEEEEeEEccC---CCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTC---GETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDAL   83 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (521)
                      .-.++|++.+.||+|+||.||+|..+..   ..+..||+|.+......                           .....
T Consensus         3 ~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~---------------------------~~~~~   55 (288)
T cd05061           3 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASL---------------------------RERIE   55 (288)
T ss_pred             ccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCH---------------------------HHHHH
Confidence            3457999999999999999999976531   13457999987532110                           11234


Q ss_pred             HHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc----------CCCCHHHHHHHHHHHHH
Q 009980           84 LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ----------ERYMEVGAAAVIRQIAE  153 (521)
Q Consensus        84 ~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~----------~~~~~~~~~~i~~qil~  153 (521)
                      +.+|+..++++     +||||+++++++...+..|+||||+.||+|.+++...          ...+...+..++.|++.
T Consensus        56 ~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  130 (288)
T cd05061          56 FLNEASVMKGF-----TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD  130 (288)
T ss_pred             HHHHHHHHHhC-----CCCCeeeEEEEEcCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHH
Confidence            67899999988     9999999999999999999999999999999999753          23456788999999999


Q ss_pred             HHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC---cccccCCcccccccccccCCCCchhhhHHH
Q 009980          154 GLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALLQDRITSKSDMWSL  230 (521)
Q Consensus       154 al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl  230 (521)
                      ||.|||++||+||||||+||++   +.++.++|+|||+++.......   .....++..|+|||.+.++.++.++|+||+
T Consensus       131 ~l~~lH~~~i~H~dikp~nili---~~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dvwsl  207 (288)
T cd05061         131 GMAYLNAKKFVHRDLAARNCMV---AHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSF  207 (288)
T ss_pred             HHHHHHhCCCcCCCCChheEEE---cCCCcEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHH
Confidence            9999999999999999999999   6778899999999875432211   112245678999999988889999999999


Q ss_pred             HHHHHHHHh-CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc------CCccc
Q 009980          231 GVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN------HPWVI  303 (521)
Q Consensus       231 G~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~------h~~~~  303 (521)
                      ||++|+|++ |.+||.+.+..+....+..+.....   ...+++.+++++.+||+.||++|||+.++++      ||||.
T Consensus       208 G~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~  284 (288)
T cd05061         208 GVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQ---PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFP  284 (288)
T ss_pred             HHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC---CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCC
Confidence            999999998 7999988877777766665543221   2456899999999999999999999999987      89987


Q ss_pred             CC
Q 009980          304 GD  305 (521)
Q Consensus       304 ~~  305 (521)
                      +-
T Consensus       285 ~~  286 (288)
T cd05061         285 EV  286 (288)
T ss_pred             CC
Confidence            53

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2e-40  Score=317.50  Aligned_cols=257  Identities=24%  Similarity=0.389  Sum_probs=212.5

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      .+|++.+.||+|+||.||+|.++.  +++.||+|.+.......                       ........+.+|+.
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~--~~~~~~ik~~~~~~~~~-----------------------~~~~~~~~~~~ei~   56 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDAD--TGRELAVKQVPFDPDSQ-----------------------ETSKEVNALECEIQ   56 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcC--CCCEEEEEEEecCcccc-----------------------hhhHHHHHHHHHHH
Confidence            579999999999999999999987  78899999975422110                       00122345788999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeC--CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecc
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQ--NGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRD  167 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~--~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~d  167 (521)
                      +++++     +||||+++++++.+.  ..++++|||++|++|.+++...+.+++..+..++.|++.||.|||++|++|+|
T Consensus        57 ~l~~l-----~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~d  131 (264)
T cd06653          57 LLKNL-----RHDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRD  131 (264)
T ss_pred             HHHHc-----CCCCcceEEEEEEcCCCCEEEEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCC
Confidence            99999     999999999998764  56899999999999999998878899999999999999999999999999999


Q ss_pred             CCCCcEEEeeCCCCCCEEEeecCCCccCCCC----CCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCC
Q 009980          168 LKPENCLFLNDREDSPLKIMDFGLSSVEGYT----DPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPP  243 (521)
Q Consensus       168 lkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~p  243 (521)
                      |||+||++   +.++.++|+|||+++.....    .......|++.|+|||.+.+..++.++|+||+||++|+|++|++|
T Consensus       132 l~p~ni~i---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p  208 (264)
T cd06653         132 IKGANILR---DSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPP  208 (264)
T ss_pred             CCHHHEEE---cCCCCEEECccccccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCC
Confidence            99999999   67788999999999754321    112234688999999999888889999999999999999999999


Q ss_pred             CCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcc
Q 009980          244 FIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV  302 (521)
Q Consensus       244 f~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~  302 (521)
                      |...........+.....  ....+..+++.+++++.+||. +|..|||+.+++.|||+
T Consensus       209 ~~~~~~~~~~~~~~~~~~--~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~~  264 (264)
T cd06653         209 WAEYEAMAAIFKIATQPT--KPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRHPFV  264 (264)
T ss_pred             CCccCHHHHHHHHHcCCC--CCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcCCCC
Confidence            987665555444443221  122345689999999999998 57999999999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=100.00  E-value=1e-40  Score=317.96  Aligned_cols=247  Identities=28%  Similarity=0.454  Sum_probs=209.0

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ++|++.+.||+|+||.||+|....   +..+|||.+....                             .....+.+|+.
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~---~~~~aik~~~~~~-----------------------------~~~~~~~~e~~   51 (256)
T cd05113           4 KDLTFLKELGTGQFGVVKYGKWRG---QYDVAIKMIKEGS-----------------------------MSEDEFIEEAK   51 (256)
T ss_pred             HHeEEeeEecCcccceEEEEEecC---CCcEEEEEcCCCc-----------------------------ccHHHHHHHHH
Confidence            579999999999999999998753   4469999875321                             12345788999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQANIVHRDL  168 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~~~i~H~dl  168 (521)
                      +++++     +||||+++++++......|+||||+.+|+|.+++... ..+++..+..++.||+.||.|||++|++|+||
T Consensus        52 ~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl  126 (256)
T cd05113          52 VMMKL-----SHEKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDL  126 (256)
T ss_pred             HHhcC-----CCCCeeeEEEEEccCCCcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccc
Confidence            99998     9999999999999999999999999999999998764 46899999999999999999999999999999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCccCCCCCCc--ccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CCCCCC
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSSVEGYTDPV--VGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFI  245 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~pf~  245 (521)
                      ||+||++   +.++.+||+|||.++........  ....++..|+|||.+.+..++.++|||||||++|+|++ |..||.
T Consensus       127 ~p~nili---~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~  203 (256)
T cd05113         127 AARNCLV---DDQGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYE  203 (256)
T ss_pred             CcceEEE---cCCCCEEECCCccceecCCCceeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcC
Confidence            9999999   67788999999998754332211  12235677999999988889999999999999999998 999998


Q ss_pred             CCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          246 AQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       246 ~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      ..+..+....+..+......   ...+..+++++.+||..+|.+|||+.+++.+
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~  254 (256)
T cd05113         204 RFNNSETVEKVSQGLRLYRP---HLASEKVYAIMYSCWHEKAEERPTFQQLLSS  254 (256)
T ss_pred             cCCHHHHHHHHhcCCCCCCC---CCCCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence            88777777777766544322   3468999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.8e-40  Score=315.73  Aligned_cols=253  Identities=29%  Similarity=0.509  Sum_probs=216.2

Q ss_pred             ceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHH
Q 009980           11 EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILV   90 (521)
Q Consensus        11 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   90 (521)
                      +|++.+.||+|++|.||+|.+..  +++.||+|.+......                          ......+.+|+.+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~--~~~~~~ik~~~~~~~~--------------------------~~~~~~~~~e~~~   52 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLE--TGDFVAIKQISLEKIK--------------------------EEALKSIMQEIDL   52 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcC--CCcEEEEEEecccccC--------------------------HHHHHHHHHHHHH
Confidence            58999999999999999999987  7789999998653221                          0123468899999


Q ss_pred             HHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCC
Q 009980           91 MRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKP  170 (521)
Q Consensus        91 l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp  170 (521)
                      +.++     +|||++++++++.+.+..|++|||+.|++|.+++.....+++..+..++.|++.||.|||++||+||||+|
T Consensus        53 l~~l-----~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p  127 (254)
T cd06627          53 LKNL-----KHPNIVKYIGSIETSDSLYIILEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKA  127 (254)
T ss_pred             HHhC-----CCCCccEEEEEEEeCCEEEEEEecCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCH
Confidence            9998     99999999999999999999999999999999998888899999999999999999999999999999999


Q ss_pred             CcEEEeeCCCCCCEEEeecCCCccCCCCCC-cccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCc
Q 009980          171 ENCLFLNDREDSPLKIMDFGLSSVEGYTDP-VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSN  249 (521)
Q Consensus       171 ~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~  249 (521)
                      +||++   +.++.++|+|||.+........ .....|++.|+|||.+.+..++.++|+||+|+++|+|++|..||...+.
T Consensus       128 ~ni~i---~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~  204 (254)
T cd06627         128 ANILT---TKDGVVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNP  204 (254)
T ss_pred             HHEEE---CCCCCEEEeccccceecCCCcccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccH
Confidence            99999   6678899999999986543332 2334688999999999887889999999999999999999999987665


Q ss_pred             HHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcc
Q 009980          250 RQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV  302 (521)
Q Consensus       250 ~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~  302 (521)
                      .............   .....++..+.+++.+||..+|++|||+.+++.||||
T Consensus       205 ~~~~~~~~~~~~~---~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~~  254 (254)
T cd06627         205 MAALFRIVQDDHP---PLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI  254 (254)
T ss_pred             HHHHHHHhccCCC---CCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence            4444444332222   2235678999999999999999999999999999997

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=100.00  E-value=1.7e-40  Score=317.85  Aligned_cols=248  Identities=27%  Similarity=0.419  Sum_probs=209.9

Q ss_pred             ccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEI   88 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   88 (521)
                      ..+|.+.+.||+|+||.||+|..+.  +++.||+|++....                             .....+.+|+
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~~--~~~~~~~K~~~~~~-----------------------------~~~~~~~~e~   53 (263)
T cd05052           5 RTDITMKHKLGGGQYGEVYEGVWKK--YSLTVAVKTLKEDT-----------------------------MEVEEFLKEA   53 (263)
T ss_pred             hHHeEEeeecCCcccceEEEEEEec--CCceEEEEEecCCc-----------------------------hHHHHHHHHH
Confidence            4579999999999999999999987  78889999985321                             1124578899


Q ss_pred             HHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 009980           89 LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ--ERYMEVGAAAVIRQIAEGLAALHQANIVHR  166 (521)
Q Consensus        89 ~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~al~~lH~~~i~H~  166 (521)
                      ..++++     +||||+++++++..++.+++||||+++++|.+++...  ..+++..+..++.|++.||.|||++|++||
T Consensus        54 ~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~  128 (263)
T cd05052          54 AVMKEI-----KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR  128 (263)
T ss_pred             HHHHhC-----CCCChhheEEEEcCCCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeec
Confidence            999998     9999999999999999999999999999999998753  358899999999999999999999999999


Q ss_pred             cCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCc--ccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CCCC
Q 009980          167 DLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPV--VGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPP  243 (521)
Q Consensus       167 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~p  243 (521)
                      ||||+||++   +.++.+||+|||++.........  ....+++.|+|||.+.+..++.++|||||||++|+|++ |..|
T Consensus       129 dlkp~nil~---~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p  205 (263)
T cd05052         129 DLAARNCLV---GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP  205 (263)
T ss_pred             ccCcceEEE---cCCCcEEeCCCccccccccceeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCC
Confidence            999999999   67788999999999765432211  12234667999999988899999999999999999998 9999


Q ss_pred             CCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          244 FIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       244 f~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      |.+.+..+....+..+...   .....+|+++.+++.+||..||++|||+.++++
T Consensus       206 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~  257 (263)
T cd05052         206 YPGIDLSQVYELLEKGYRM---ERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQ  257 (263)
T ss_pred             CCCCCHHHHHHHHHCCCCC---CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence            9888777776666554221   223568999999999999999999999999976

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=100.00  E-value=1.8e-40  Score=321.82  Aligned_cols=257  Identities=28%  Similarity=0.424  Sum_probs=209.5

Q ss_pred             eeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHH
Q 009980           12 YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVM   91 (521)
Q Consensus        12 Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l   91 (521)
                      |++.+.||+|+||.||+|+++.  +++.||+|.+.......                          .....+.+|+.++
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~--~~~~~aiK~~~~~~~~~--------------------------~~~~~~~~e~~~l   52 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLN--TGRFVALKKVRVPLSEE--------------------------GIPLSTLREIALL   52 (287)
T ss_pred             CeEEEEecccCceEEEEEEECC--CCCEEEEEEeccccccc--------------------------hhhhhHHHHHHHH
Confidence            7889999999999999999987  78899999986432211                          1112355677777


Q ss_pred             HHHhhccCCCCCccceeEEEEeCCe-----EEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 009980           92 RKIVENVSPHPNVIDLYDVYEDQNG-----VHLILELCSGGELFDRIVAQE--RYMEVGAAAVIRQIAEGLAALHQANIV  164 (521)
Q Consensus        92 ~~l~~~~~~hpniv~~~~~~~~~~~-----~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~al~~lH~~~i~  164 (521)
                      +++..  ..||||+++++++.....     +|++|||+.+ +|.+++....  .+++..+..++.|++.||.|||+.|++
T Consensus        53 ~~l~~--~~h~~i~~~~~~~~~~~~~~~~~~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~  129 (287)
T cd07838          53 KQLES--FEHPNIVRLLDVCHGPRTDRELKLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIV  129 (287)
T ss_pred             HHhhc--cCCCCcceEEEEEeeccCCCCceeEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence            76621  169999999999988876     9999999975 8988887643  589999999999999999999999999


Q ss_pred             eccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCC
Q 009980          165 HRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF  244 (521)
Q Consensus       165 H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf  244 (521)
                      |+||+|+||++   +.++.++|+|||++.............+++.|+|||.+.+..++.++|+||+||++|+|++|.+||
T Consensus       130 h~~l~~~nili---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~  206 (287)
T cd07838         130 HRDLKPQNILV---TSDGQVKIADFGLARIYSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLF  206 (287)
T ss_pred             eccCChhhEEE---ccCCCEEEeccCcceeccCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcc
Confidence            99999999999   667899999999998765444444456888999999999888999999999999999999999999


Q ss_pred             CCCCcHHHHHHHHcCCCC-----------------------CchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCc
Q 009980          245 IAQSNRQKQQMIMAGEFS-----------------------FYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPW  301 (521)
Q Consensus       245 ~~~~~~~~~~~i~~~~~~-----------------------~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~  301 (521)
                      .+.+..+....+......                       ......+.+++.+.++|.+||+.||.+||++.+++.|||
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~  286 (287)
T cd07838         207 RGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPY  286 (287)
T ss_pred             cCCChHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcC
Confidence            888776666555431110                       001112346788999999999999999999999999999


Q ss_pred             c
Q 009980          302 V  302 (521)
Q Consensus       302 ~  302 (521)
                      |
T Consensus       287 ~  287 (287)
T cd07838         287 F  287 (287)
T ss_pred             C
Confidence            7

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=100.00  E-value=1.3e-40  Score=321.29  Aligned_cols=256  Identities=27%  Similarity=0.411  Sum_probs=209.4

Q ss_pred             ccceeecccccccCceEEEEeEEccCC---CcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCG---ETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      .++|.+.+.||+|+||.||+|.++...   ++..||+|.++....                           ......+.
T Consensus         5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~---------------------------~~~~~~~~   57 (277)
T cd05036           5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCS---------------------------EQDESDFL   57 (277)
T ss_pred             HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCC---------------------------HHHHHHHH
Confidence            478999999999999999999987521   456799998753211                           11234578


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHH
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE-------RYMEVGAAAVIRQIAEGLAAL  158 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-------~~~~~~~~~i~~qil~al~~l  158 (521)
                      +|+.+++++     +||||+++++++.+.+..|+||||+.|++|.+++...+       .+++..+..++.||+.||.||
T Consensus        58 ~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~L  132 (277)
T cd05036          58 MEALIMSKF-----NHQNIVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYL  132 (277)
T ss_pred             HHHHHHHhC-----CCCCEeeEEEEEccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            899999998     99999999999999999999999999999999987653       488999999999999999999


Q ss_pred             HHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC---cccccCCcccccccccccCCCCchhhhHHHHHHHH
Q 009980          159 HQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY  235 (521)
Q Consensus       159 H~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~  235 (521)
                      |++|++||||||+||++........+||+|||+++.......   .....+++.|+|||++.+..++.++|||||||++|
T Consensus       133 H~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~  212 (277)
T cd05036         133 EENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLW  212 (277)
T ss_pred             HHCCEeecccchheEEEeccCCCcceEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHH
Confidence            999999999999999995433445799999999986532211   11223456799999998888999999999999999


Q ss_pred             HHHh-CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          236 ILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       236 ~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      +|++ |..||.+.+.......+.......   ....+|..+.+++.+||+.+|++|||+.++++|
T Consensus       213 el~~~g~~pf~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~  274 (277)
T cd05036         213 EIFSLGYMPYPGRTNQEVMEFVTGGGRLD---PPKGCPGPVYRIMTDCWQHTPEDRPNFATILER  274 (277)
T ss_pred             HHHcCCCCCCCCCCHHHHHHHHHcCCcCC---CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            9997 999999887777766665442211   124578999999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>PHA03210 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=3.7e-41  Score=349.50  Aligned_cols=280  Identities=21%  Similarity=0.288  Sum_probs=200.4

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      ..+.++|++++.||+|+||+||+|..+.. .+..+++|.+..........           .................+.
T Consensus       144 ~~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~-~~~~~~~~~~~~~~~~~~~~-----------~~~~~k~~~~~~~~~~~~~  211 (501)
T PHA03210        144 DEFLAHFRVIDDLPAGAFGKIFICALRAS-TEEAEARRGVNSTNQGKPKC-----------ERLIAKRVKAGSRAAIQLE  211 (501)
T ss_pred             hhhhhccEEEeEecCCCCcceEEEEEecc-chhhhhhhccccccccchhh-----------hhhHhHHhhcchHHHHHHH
Confidence            45678999999999999999999987652 33334444332111100000           0000000000111234578


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-----ERYMEVGAAAVIRQIAEGLAALHQ  160 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-----~~~~~~~~~~i~~qil~al~~lH~  160 (521)
                      +|+.+++++     +||||+++++++...+..|+|++++. ++|.+++...     .......+..++.||+.||.|||+
T Consensus       212 ~Ei~il~~l-----~HpnIv~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~  285 (501)
T PHA03210        212 NEILALGRL-----NHENILKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHD  285 (501)
T ss_pred             HHHHHHHhC-----CCCCcCcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHh
Confidence            899999999     99999999999999999999999995 4777776532     234567788999999999999999


Q ss_pred             CCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC--cccccCCcccccccccccCCCCchhhhHHHHHHHHHHH
Q 009980          161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP--VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILL  238 (521)
Q Consensus       161 ~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll  238 (521)
                      +||+||||||+|||+   +.++.+||+|||+++.......  .....||+.|+|||++.+..++.++|||||||++|+|+
T Consensus       286 ~gIiHrDLKP~NILl---~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell  362 (501)
T PHA03210        286 KKLIHRDIKLENIFL---NCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDML  362 (501)
T ss_pred             CCeecCCCCHHHEEE---CCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHH
Confidence            999999999999999   7788999999999976543221  23457999999999999999999999999999999999


Q ss_pred             hCCCCCC-CCC--cHHHHHHHHcCC----CCCch----------------------h--hhhccCHHHHHHHHHhccCCC
Q 009980          239 SGYPPFI-AQS--NRQKQQMIMAGE----FSFYE----------------------Q--TWKNISSSAKQLISSLLTVDP  287 (521)
Q Consensus       239 ~g~~pf~-~~~--~~~~~~~i~~~~----~~~~~----------------------~--~~~~~s~~~~~li~~~l~~dp  287 (521)
                      +|..|+. ...  .......+....    ..++.                      .  ....++.++.++|.+||..||
T Consensus       363 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP  442 (501)
T PHA03210        363 SHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDW  442 (501)
T ss_pred             HCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCc
Confidence            9876443 222  111111111110    00000                      0  011356778899999999999


Q ss_pred             CCCCCHHHHHcCCcccCCC
Q 009980          288 NRRPSAQELLNHPWVIGDS  306 (521)
Q Consensus       288 ~~R~t~~~~l~h~~~~~~~  306 (521)
                      .+|||+.|+|.||||....
T Consensus       443 ~~Rpsa~elL~hp~f~~~~  461 (501)
T PHA03210        443 HLRPGAAELLALPLFSAEE  461 (501)
T ss_pred             ccCcCHHHHhhChhhhcCC
Confidence            9999999999999997643

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=100.00  E-value=7.9e-41  Score=320.89  Aligned_cols=252  Identities=26%  Similarity=0.429  Sum_probs=208.4

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ++|++.+.||+|++|.||+|+++.  +++.||||.+.......                         ......+.+|+.
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~--~~~~~~vK~~~~~~~~~-------------------------~~~~~~~~~e~~   54 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLL--DGVPVALKKVQIFDLMD-------------------------AKARADCIKEID   54 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecC--CCceEEEEeeeehhhhh-------------------------HHHHHHHHHHHH
Confidence            579999999999999999999887  78899999886532211                         112345778999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA----QERYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      +++.+     +||||+++++++..++..+++|||+.|++|.+++..    ...+++..+..++.||+.||.|||++|++|
T Consensus        55 ~l~~~-----~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H  129 (267)
T cd08229          55 LLKQL-----NHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMH  129 (267)
T ss_pred             HHHHc-----cCCchhhhhheeEeCCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence            99998     999999999999999999999999999999988763    356899999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC-cccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCC
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP-VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF  244 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf  244 (521)
                      +||||+||++   +.++.++|+|||++........ .....|++.|+|||.+.+..++.++|+||+|+++|+|++|..||
T Consensus       130 ~dl~p~nili---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~  206 (267)
T cd08229         130 RDIKPANVFI---TATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPF  206 (267)
T ss_pred             CCCCHHHEEE---cCCCCEEECcchhhhccccCCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCc
Confidence            9999999999   6778899999999876543222 23346899999999998888999999999999999999999999


Q ss_pred             CCCCcH--HHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          245 IAQSNR--QKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       245 ~~~~~~--~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      .+....  .....+.....  +...+..+++.+++++.+||..||++|||+.++++
T Consensus       207 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~  260 (267)
T cd08229         207 YGDKMNLYSLCKKIEQCDY--PPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYD  260 (267)
T ss_pred             ccccchHHHHhhhhhcCCC--CCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHH
Confidence            765432  33333333322  22223568899999999999999999999998775

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=100.00  E-value=2e-40  Score=316.10  Aligned_cols=254  Identities=30%  Similarity=0.493  Sum_probs=214.8

Q ss_pred             ceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHH
Q 009980           11 EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILV   90 (521)
Q Consensus        11 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   90 (521)
                      +|.+.+.||+|++|.||+|.++.  +++.|++|++......                          ......+.+|+.+
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~--~~~~~~ik~~~~~~~~--------------------------~~~~~~~~~e~~~   52 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKD--TGELMAVKSVELSGDS--------------------------EEELEALEREIRI   52 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECC--CCcEEEEEEeeccccc--------------------------hHHHHHHHHHHHH
Confidence            58899999999999999999987  7889999998653221                          1224568899999


Q ss_pred             HHHHhhccCCCCCccceeEEEEeC--CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 009980           91 MRKIVENVSPHPNVIDLYDVYEDQ--NGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDL  168 (521)
Q Consensus        91 l~~l~~~~~~hpniv~~~~~~~~~--~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dl  168 (521)
                      ++++     +||||+++++.+...  ..+++||||+.|++|.+++.....+++..+..++.|++.||.|||+.|++|+||
T Consensus        53 l~~l-----~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl  127 (260)
T cd06606          53 LSSL-----QHPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDI  127 (260)
T ss_pred             HHHc-----CCCCEeeEEEEEecCCCCeEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCC
Confidence            9999     899999999999988  899999999999999999988889999999999999999999999999999999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCccCCCCCC---cccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCC
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFI  245 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~  245 (521)
                      +|+||++   +.++.++|+|||.+........   .....++..|+|||.+....++.++|+||+|+++|+|++|..||.
T Consensus       128 ~p~ni~i---~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~  204 (260)
T cd06606         128 KGANILV---DSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWS  204 (260)
T ss_pred             CHHHEEE---cCCCCEEEcccccEEecccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence            9999999   6678999999999987654432   344568899999999988889999999999999999999999997


Q ss_pred             CCCc-HHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcc
Q 009980          246 AQSN-RQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV  302 (521)
Q Consensus       246 ~~~~-~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~  302 (521)
                      .... ......+...  .........++..+++++.+||..||.+|||+.+++.||||
T Consensus       205 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~  260 (260)
T cd06606         205 ELGNPMAALYKIGSS--GEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL  260 (260)
T ss_pred             CCCchHHHHHhcccc--CCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence            7652 2222222211  11122234578999999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=100.00  E-value=1.7e-40  Score=321.99  Aligned_cols=262  Identities=29%  Similarity=0.511  Sum_probs=221.9

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      ....+.|++.+.||+|++|.||+|.+..  ++..||+|++.....                             ....+.
T Consensus        15 ~~~~~~~~~~~~l~~g~~~~v~~~~~~~--~~~~~~iK~~~~~~~-----------------------------~~~~~~   63 (286)
T cd06614          15 GDPRELYKNLEKIGEGASGEVYKATDRA--TGKEVAIKKMRLRKQ-----------------------------NKELII   63 (286)
T ss_pred             CCccccchHhHhccCCCCeEEEEEEEcc--CCcEEEEEEEecCch-----------------------------hHHHHH
Confidence            4567789999999999999999999987  678999999864211                             234578


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE-RYMEVGAAAVIRQIAEGLAALHQANIV  164 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qil~al~~lH~~~i~  164 (521)
                      +|+.+++++     +||||+++++.+...+..|+|+||+.|++|.+++.... .++...+..++.|++.||.|||+.|++
T Consensus        64 ~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~  138 (286)
T cd06614          64 NEILIMKDC-----KHPNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVI  138 (286)
T ss_pred             HHHHHHHHC-----CCCCeeEEEEEEEECCEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            899999998     99999999999999999999999999999999998876 899999999999999999999999999


Q ss_pred             eccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC-CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCC
Q 009980          165 HRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPP  243 (521)
Q Consensus       165 H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~p  243 (521)
                      |+||+|+||++   +.++.++|+|||++....... ......+++.|+|||.+.+..++.++|+||+|+++|+|++|..|
T Consensus       139 H~dl~p~ni~i---~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p  215 (286)
T cd06614         139 HRDIKSDNILL---SKDGSVKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPP  215 (286)
T ss_pred             eCCCChhhEEE---cCCCCEEECccchhhhhccchhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCC
Confidence            99999999999   677889999999886543221 22334578899999999888899999999999999999999999


Q ss_pred             CCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCCC
Q 009980          244 FIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSA  307 (521)
Q Consensus       244 f~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~~  307 (521)
                      |...+.......+....... ......++..++++|.+||+.+|.+|||+.+++.||||.....
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~  278 (286)
T cd06614         216 YLREPPLRALFLITTKGIPP-LKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKKACP  278 (286)
T ss_pred             CCCCCHHHHHHHHHhcCCCC-CcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhccCc
Confidence            98776665555554433321 1222447899999999999999999999999999999987443

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=100.00  E-value=1.4e-40  Score=317.05  Aligned_cols=252  Identities=28%  Similarity=0.447  Sum_probs=217.1

Q ss_pred             ceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHH
Q 009980           11 EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILV   90 (521)
Q Consensus        11 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   90 (521)
                      +|++.+.||.|+||.||+|.++.  +++.+|+|.+.......                          .....+.+|+.+
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~--~~~~~~ik~~~~~~~~~--------------------------~~~~~~~~e~~~   52 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLS--DNQFYALKEVDLGSMSQ--------------------------KEREDAVNEIRI   52 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECC--CCCEEEEEEEehhhccH--------------------------HHHHHHHHHHHH
Confidence            58999999999999999999887  77899999986533211                          123446778899


Q ss_pred             HHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 009980           91 MRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA----QERYMEVGAAAVIRQIAEGLAALHQANIVHR  166 (521)
Q Consensus        91 l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qil~al~~lH~~~i~H~  166 (521)
                      ++++     +||||+++++++.+....|+||||++|++|.+++..    ...+++..+..++.|++.||.|||+.|++|+
T Consensus        53 l~~l-----~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~  127 (256)
T cd08530          53 LASV-----NHPNIISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHR  127 (256)
T ss_pred             HHhC-----CCCCchhhhhhhccCCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccC
Confidence            9988     899999999999999999999999999999998866    3568999999999999999999999999999


Q ss_pred             cCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCC
Q 009980          167 DLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIA  246 (521)
Q Consensus       167 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~  246 (521)
                      ||+|+||++   +.++.+||+|||++...... ......|++.|+|||.+.+..++.++|+||+|+++|+|++|+.||..
T Consensus       128 ~l~~~ni~~---~~~~~~kl~d~g~~~~~~~~-~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~  203 (256)
T cd08530         128 DLKSANILL---VANDLVKIGDLGISKVLKKN-MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEA  203 (256)
T ss_pred             CCCcceEEE---ecCCcEEEeeccchhhhccC-CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            999999999   55778999999999765443 22334688999999999988899999999999999999999999998


Q ss_pred             CCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcc
Q 009980          247 QSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV  302 (521)
Q Consensus       247 ~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~  302 (521)
                      .+..+....+..+.+....   ..++.++++++.+||..+|++|||+.++++||++
T Consensus       204 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p~~  256 (256)
T cd08530         204 RSMQDLRYKVQRGKYPPIP---PIYSQDLQNFIRSMLQVKPKLRPNCDKILASPAV  256 (256)
T ss_pred             CCHHHHHHHHhcCCCCCCc---hhhCHHHHHHHHHHcCCCcccCCCHHHHhcCCCC
Confidence            8877777777666544332   3578999999999999999999999999999975

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=100.00  E-value=1.2e-40  Score=319.85  Aligned_cols=250  Identities=28%  Similarity=0.443  Sum_probs=200.7

Q ss_pred             cccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHH
Q 009980           15 TDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKI   94 (521)
Q Consensus        15 ~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l   94 (521)
                      ...||+|+||.||+|.++.  ++..||+|.+.....                            .....+.+|+.+++++
T Consensus        13 ~~~lg~g~~g~v~~~~~~~--~~~~v~~k~~~~~~~----------------------------~~~~~~~~e~~~l~~l   62 (268)
T cd06624          13 RVVLGKGTYGIVYAARDLS--TQVRIAIKEIPERDS----------------------------RYVQPLHEEIALHSYL   62 (268)
T ss_pred             eEEEecCCceEEEEeEecC--CCcEEEEEEecCCCH----------------------------HHHHHHHHHHHHHHhc
Confidence            3579999999999999887  788999998754221                            1234578899999998


Q ss_pred             hhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-CCC--CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCC
Q 009980           95 VENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-ERY--MEVGAAAVIRQIAEGLAALHQANIVHRDLKPE  171 (521)
Q Consensus        95 ~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~--~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~  171 (521)
                           +||||+++++++..++.+++|+||+.|++|.+++... ..+  ++..+..++.||+.||.|||++||+||||||+
T Consensus        63 -----~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~  137 (268)
T cd06624          63 -----KHRNIVQYLGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGD  137 (268)
T ss_pred             -----CCCCeeeeeeeeccCCEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHH
Confidence                 9999999999999999999999999999999998764 445  78889999999999999999999999999999


Q ss_pred             cEEEeeCCCCCCEEEeecCCCccCCCCCC-cccccCCcccccccccccCC--CCchhhhHHHHHHHHHHHhCCCCCCCCC
Q 009980          172 NCLFLNDREDSPLKIMDFGLSSVEGYTDP-VVGLFGSIDYVSPEALLQDR--ITSKSDMWSLGVILYILLSGYPPFIAQS  248 (521)
Q Consensus       172 Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~--~~~~~DiwslG~il~~ll~g~~pf~~~~  248 (521)
                      ||++.  ...+.++|+|||++........ .....|++.|+|||.+.+..  ++.++|+||+|+++|+|++|.+||....
T Consensus       138 nil~~--~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~  215 (268)
T cd06624         138 NVLVN--TYSGVVKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELG  215 (268)
T ss_pred             HEEEc--CCCCeEEEecchhheecccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCcccc
Confidence            99992  2256899999999875432222 22345889999999986543  7889999999999999999999997644


Q ss_pred             cHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcc
Q 009980          249 NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV  302 (521)
Q Consensus       249 ~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~  302 (521)
                      ........ ..........+..+++++++++.+||..+|.+|||+.+++.||||
T Consensus       216 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~  268 (268)
T cd06624         216 EPQAAMFK-VGMFKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL  268 (268)
T ss_pred             ChhhhHhh-hhhhccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence            32221111 111111112234688999999999999999999999999999997

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1.2e-40  Score=331.39  Aligned_cols=265  Identities=26%  Similarity=0.419  Sum_probs=211.7

Q ss_pred             cccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHH
Q 009980            4 ETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDAL   83 (521)
Q Consensus         4 ~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (521)
                      +...+.++|++.+.||+|+||.||+|.+..  +++.||+|.+.+....                          ......
T Consensus        11 ~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~--~~~~vaiK~~~~~~~~--------------------------~~~~~~   62 (345)
T cd07877          11 TIWEVPERYQNLSPVGSGAYGSVCAAFDTK--TGLRVAVKKLSRPFQS--------------------------IIHAKR   62 (345)
T ss_pred             HHhhccCceEEEEEeeecCCeEEEEEEEcC--CCeEEEEEEecCcchh--------------------------hHHHHH
Confidence            344577999999999999999999999887  7889999998642111                          012344


Q ss_pred             HHHHHHHHHHHhhccCCCCCccceeEEEEeC------CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 009980           84 LTNEILVMRKIVENVSPHPNVIDLYDVYEDQ------NGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAA  157 (521)
Q Consensus        84 ~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~------~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~  157 (521)
                      +.+|+.+++++     +||||+++++++...      ...|++++++ |++|.+.+.. ..+++..+..++.|++.||.|
T Consensus        63 ~~~Ei~~l~~l-----~h~~iv~~~~~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~  135 (345)
T cd07877          63 TYRELRLLKHM-----KHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKC-QKLTDDHVQFLIYQILRGLKY  135 (345)
T ss_pred             HHHHHHHHHHc-----CCCcccceeeeeeecccccccccEEEEehhc-ccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHH
Confidence            67899999998     999999999998643      3478899887 7799877654 469999999999999999999


Q ss_pred             HHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCccccccccccc-CCCCchhhhHHHHHHHHH
Q 009980          158 LHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQ-DRITSKSDMWSLGVILYI  236 (521)
Q Consensus       158 lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~  236 (521)
                      ||++||+||||||+||++   +.++.++|+|||++.....  ......|++.|+|||.+.+ ..++.++||||+||++|+
T Consensus       136 LH~~~ivH~dlkp~NIll---~~~~~~kl~dfg~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~e  210 (345)
T cd07877         136 IHSADIIHRDLKPSNLAV---NEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE  210 (345)
T ss_pred             HHHCCeeecCCChHHEEE---cCCCCEEEecccccccccc--cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHH
Confidence            999999999999999999   6778899999999876432  2234568899999998865 467899999999999999


Q ss_pred             HHhCCCCCCCCCcHHHHHHHHcCCCCCc---------------------------hhhhhccCHHHHHHHHHhccCCCCC
Q 009980          237 LLSGYPPFIAQSNRQKQQMIMAGEFSFY---------------------------EQTWKNISSSAKQLISSLLTVDPNR  289 (521)
Q Consensus       237 ll~g~~pf~~~~~~~~~~~i~~~~~~~~---------------------------~~~~~~~s~~~~~li~~~l~~dp~~  289 (521)
                      |++|++||.+.+.......+.......+                           ...+...++.+++||.+||..||.+
T Consensus       211 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~  290 (345)
T cd07877         211 LLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK  290 (345)
T ss_pred             HHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhh
Confidence            9999999987665544433322111100                           0112245888999999999999999


Q ss_pred             CCCHHHHHcCCcccCCCCc
Q 009980          290 RPSAQELLNHPWVIGDSAK  308 (521)
Q Consensus       290 R~t~~~~l~h~~~~~~~~~  308 (521)
                      |||+.+++.||||.+...+
T Consensus       291 R~t~~e~l~h~~f~~~~~~  309 (345)
T cd07877         291 RITAAQALAHAYFAQYHDP  309 (345)
T ss_pred             cCCHHHHhcChhhhhcCCC
Confidence            9999999999999865443

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=100.00  E-value=1.2e-40  Score=331.14  Aligned_cols=260  Identities=28%  Similarity=0.397  Sum_probs=207.7

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      .+..+|++.+.||.|+||.||+|.++.  +++.||+|.+.....                            .....+.+
T Consensus         2 ~~~~~y~~~~~Lg~g~~g~vy~~~~~~--~~~~v~iK~i~~~~~----------------------------~~~~~~~~   51 (342)
T cd07854           2 DLGSRYMDLRPLGCGSNGLVFSAVDSD--CDKRVAVKKIVLTDP----------------------------QSVKHALR   51 (342)
T ss_pred             CcCcceEEEEEecCCCCEEEEEEEECC--CCcEEEEEEEecCCC----------------------------chHHHHHH
Confidence            356899999999999999999999987  788999999864322                            12345778


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeC--------------CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHH
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQ--------------NGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIA  152 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~--------------~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil  152 (521)
                      |+.+++++     +||||+++++++...              ...|+||||+.+ +|.+.+.. ..+++..+..++.||+
T Consensus        52 Ei~~l~~l-----~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~-~~l~~~~~~~~~~qi~  124 (342)
T cd07854          52 EIKIIRRL-----DHDNIVKVYEVLGPSGSDLTEDVGSLTELNSVYIVQEYMET-DLANVLEQ-GPLSEEHARLFMYQLL  124 (342)
T ss_pred             HHHHHHhc-----CCCcchhhHhhhcccccccccccccccccceEEEEeecccc-cHHHHHHc-CCCCHHHHHHHHHHHH
Confidence            99999998     999999999877654              358999999974 88877754 5799999999999999


Q ss_pred             HHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC----CcccccCCccccccccccc-CCCCchhhh
Q 009980          153 EGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD----PVVGLFGSIDYVSPEALLQ-DRITSKSDM  227 (521)
Q Consensus       153 ~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~~Di  227 (521)
                      .||.|||+.||+||||||+||++.  ..+..++|+|||.+.......    ......|++.|+|||.+.+ ..++.++||
T Consensus       125 ~aL~~LH~~givH~dikp~Nili~--~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di  202 (342)
T cd07854         125 RGLKYIHSANVLHRDLKPANVFIN--TEDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDM  202 (342)
T ss_pred             HHHHHHHhCCcccCCCCHHHEEEc--CCCceEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhH
Confidence            999999999999999999999993  244578999999987543221    1122357889999998754 567889999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCcHHHHHHHHcCCCC--------------------------CchhhhhccCHHHHHHHHH
Q 009980          228 WSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFS--------------------------FYEQTWKNISSSAKQLISS  281 (521)
Q Consensus       228 wslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~--------------------------~~~~~~~~~s~~~~~li~~  281 (521)
                      |||||++|+|++|..||.+.+..+....+......                          ........++.++++||.+
T Consensus       203 wSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  282 (342)
T cd07854         203 WAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQ  282 (342)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHH
Confidence            99999999999999999877655544443322110                          0011123578899999999


Q ss_pred             hccCCCCCCCCHHHHHcCCcccCC
Q 009980          282 LLTVDPNRRPSAQELLNHPWVIGD  305 (521)
Q Consensus       282 ~l~~dp~~R~t~~~~l~h~~~~~~  305 (521)
                      ||+.||.+|||+.+++.||||+..
T Consensus       283 ~L~~dP~~R~t~~ell~h~~~~~~  306 (342)
T cd07854         283 ILTFNPMDRLTAEEALMHPYMSCY  306 (342)
T ss_pred             HhCCCchhccCHHHHhCCCccccc
Confidence            999999999999999999999743

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=100.00  E-value=2.6e-40  Score=314.09  Aligned_cols=252  Identities=29%  Similarity=0.531  Sum_probs=213.8

Q ss_pred             ceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHH
Q 009980           11 EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILV   90 (521)
Q Consensus        11 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   90 (521)
                      +|++.+.||+|++|.||+|.+..  +++.||+|++.....                            .....+.+|+.+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~--~~~~~~~k~~~~~~~----------------------------~~~~~~~~e~~~   50 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHKR--TGKEVAIKVIKLESK----------------------------EKKEKIINEIQI   50 (253)
T ss_pred             CceeeeeeccCCceEEEEEEECC--CCcEEEEEEecccch----------------------------hHHHHHHHHHHH
Confidence            58899999999999999999987  788999999864221                            123558889999


Q ss_pred             HHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCC
Q 009980           91 MRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQANIVHRDLK  169 (521)
Q Consensus        91 l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlk  169 (521)
                      ++++     .||||+++++++..+...++++||+.|++|.+++... ..+++..+..++.|++.||.|||++|++||||+
T Consensus        51 l~~l-----~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~  125 (253)
T cd05122          51 LKKC-----KHPNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIK  125 (253)
T ss_pred             HHhC-----CCCCEeEEEEEEecCCeEEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCC
Confidence            9998     8999999999999999999999999999999998776 679999999999999999999999999999999


Q ss_pred             CCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCc
Q 009980          170 PENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSN  249 (521)
Q Consensus       170 p~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~  249 (521)
                      |+||++   +.++.++|+|||.+.............|+..|+|||.+.+..++.++|+||+|+++|+|++|..||...+.
T Consensus       126 p~ni~i---~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~  202 (253)
T cd05122         126 AANILL---TSDGEVKLIDFGLSAQLSDTKARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPP  202 (253)
T ss_pred             HHHEEE---ccCCeEEEeeccccccccccccccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCch
Confidence            999999   66788999999999876544323445688999999999888889999999999999999999999987755


Q ss_pred             HHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCc
Q 009980          250 RQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPW  301 (521)
Q Consensus       250 ~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~  301 (521)
                      ......+........ .....++..+.++|.+||..||++|||+.+++.|||
T Consensus       203 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~~  253 (253)
T cd05122         203 MKALFKIATNGPPGL-RNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF  253 (253)
T ss_pred             HHHHHHHHhcCCCCc-CcccccCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence            554444443222111 111224889999999999999999999999999999

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=100.00  E-value=1.9e-40  Score=317.11  Aligned_cols=247  Identities=27%  Similarity=0.411  Sum_probs=208.5

Q ss_pred             ccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEI   88 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   88 (521)
                      .++|++.+.||+|+||.||+|...   .+..||+|.+....                             .....+.+|+
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~---~~~~v~iK~~~~~~-----------------------------~~~~~~~~e~   52 (261)
T cd05072           5 RESIKLVKKLGAGQFGEVWMGYYN---NSTKVAVKTLKPGT-----------------------------MSVQAFLEEA   52 (261)
T ss_pred             hHHeEEeeecCCcCCceEEEEEec---CCceEEEEEccCCc-----------------------------hhHHHHHHHH
Confidence            578999999999999999999875   45679999875311                             1234578899


Q ss_pred             HHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 009980           89 LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA--QERYMEVGAAAVIRQIAEGLAALHQANIVHR  166 (521)
Q Consensus        89 ~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~--~~~~~~~~~~~i~~qil~al~~lH~~~i~H~  166 (521)
                      .+++++     +||||+++++++.+.+..|+||||+.|++|.+++..  ...++...+..++.|++.||.|||++|++||
T Consensus        53 ~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~  127 (261)
T cd05072          53 NLMKTL-----QHDKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHR  127 (261)
T ss_pred             HHHHhC-----CCCCeeeEEEEEcCCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecc
Confidence            999998     999999999999999999999999999999998865  3568889999999999999999999999999


Q ss_pred             cCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC--cccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CCCC
Q 009980          167 DLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP--VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPP  243 (521)
Q Consensus       167 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~p  243 (521)
                      ||||+||++   +.++.++|+|||++........  .....++..|+|||.+.+..++.++|||||||++|+|++ |..|
T Consensus       128 dl~p~nili---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p  204 (261)
T cd05072         128 DLRAANVLV---SESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIP  204 (261)
T ss_pred             ccchhhEEe---cCCCcEEECCCccceecCCCceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCC
Confidence            999999999   6778899999999976543221  122345678999999988889999999999999999998 9999


Q ss_pred             CCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          244 FIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       244 f~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      |...+.......+..+.. .  +....++.++.+++.+||..+|++|||++++++
T Consensus       205 ~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  256 (261)
T cd05072         205 YPGMSNSDVMSALQRGYR-M--PRMENCPDELYDIMKTCWKEKAEERPTFDYLQS  256 (261)
T ss_pred             CCCCCHHHHHHHHHcCCC-C--CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence            988777777766665432 2  222468899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=100.00  E-value=2.7e-40  Score=322.11  Aligned_cols=269  Identities=24%  Similarity=0.324  Sum_probs=212.3

Q ss_pred             CccccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccH
Q 009980            2 GQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSD   81 (521)
Q Consensus         2 ~~~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (521)
                      ++....-.++|++.+.||+|+||.||+|.+..  +++.||||.+++....                           ...
T Consensus         7 ~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~--~~~~~avK~~~~~~~~---------------------------~~~   57 (296)
T cd06618           7 GQKYPADLNDLENLGEIGSGTCGQVYKMRFKK--TGHVMAVKQMRRTGNK---------------------------EEN   57 (296)
T ss_pred             ceeccCCcchheeeeEeeccCCeEEEEEEECC--CCeEEEEEEEeccCCh---------------------------HHH
Confidence            34455567899999999999999999999987  6889999998753211                           112


Q ss_pred             HHHHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHH
Q 009980           82 ALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQ  160 (521)
Q Consensus        82 ~~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~al~~lH~  160 (521)
                      ..+..|+.++.+.    .+||||+++++++.+....|+||||+.+ +|.+.+.. ...+++..+..++.|++.||.|||+
T Consensus        58 ~~~~~e~~~~~~~----~~~~~i~~~~~~~~~~~~~~~v~e~~~~-~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~  132 (296)
T cd06618          58 KRILMDLDVVLKS----HDCPYIVKCYGYFITDSDVFICMELMST-CLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKE  132 (296)
T ss_pred             HHHHHHHHHHHhc----cCCCchHhhheeeecCCeEEEEeeccCc-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            3355566655554    3699999999999999999999999854 67666654 4578999999999999999999997


Q ss_pred             -CCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCC----CCchhhhHHHHHHHH
Q 009980          161 -ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDR----ITSKSDMWSLGVILY  235 (521)
Q Consensus       161 -~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DiwslG~il~  235 (521)
                       .||+||||+|+||++   +.++.+||+|||++.............+++.|+|||.+.+..    ++.++|+||+|+++|
T Consensus       133 ~~~i~H~dl~p~nill---~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~  209 (296)
T cd06618         133 KHGVIHRDVKPSNILL---DASGNVKLCDFGISGRLVDSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLV  209 (296)
T ss_pred             hCCEecCCCcHHHEEE---cCCCCEEECccccchhccCCCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHH
Confidence             599999999999999   678899999999987654333333445788999999987553    788999999999999


Q ss_pred             HHHhCCCCCCCCCc-HHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCCCc
Q 009980          236 ILLSGYPPFIAQSN-RQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAK  308 (521)
Q Consensus       236 ~ll~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~~~  308 (521)
                      +|++|+.||..... .+....+........ +....++.++.+|+.+||..||.+|||+.+++.|||+......
T Consensus       210 el~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~  282 (296)
T cd06618         210 ELATGQFPYKNCKTEFEVLTKILQEEPPSL-PPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRRYETA  282 (296)
T ss_pred             HHHhCCCCCCcchhHHHHHHHHhcCCCCCC-CCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhccchh
Confidence            99999999976432 334444444432211 1113478999999999999999999999999999999865443

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=100.00  E-value=1.4e-40  Score=323.20  Aligned_cols=261  Identities=28%  Similarity=0.472  Sum_probs=212.0

Q ss_pred             ceeecccccccCceEEEEeEEcc-CCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           11 EYEVTDILGRGGFSVVRRGIKKT-CGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        11 ~Y~~~~~lG~G~~g~V~~a~~~~-~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      .|++.+.||.|+||.||+|.+.. ..++..||+|++........                        ......+.+|+.
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~------------------------~~~~~~~~~e~~   56 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQK------------------------AKTTEHTRTERQ   56 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhc------------------------chHHHHHHHHHH
Confidence            48999999999999999998753 12678899999875322110                        112344678898


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCC
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLK  169 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlk  169 (521)
                      +++++    .+||||++++++++.+..+|+||||++|++|.+++.....+++..+..++.|++.||.|||++|++||||+
T Consensus        57 ~l~~l----~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~  132 (290)
T cd05613          57 VLEHI----RQSPFLVTLHYAFQTDTKLHLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIK  132 (290)
T ss_pred             HHHhc----ccCCChhceeeEeecCCeEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCC
Confidence            88887    36999999999999999999999999999999999988889999999999999999999999999999999


Q ss_pred             CCcEEEeeCCCCCCEEEeecCCCccCCCCC--CcccccCCcccccccccccC--CCCchhhhHHHHHHHHHHHhCCCCCC
Q 009980          170 PENCLFLNDREDSPLKIMDFGLSSVEGYTD--PVVGLFGSIDYVSPEALLQD--RITSKSDMWSLGVILYILLSGYPPFI  245 (521)
Q Consensus       170 p~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~~ll~g~~pf~  245 (521)
                      |+||++   +.++.++|+|||++.......  ......|++.|+|||.+.+.  .++.++||||+|+++|+|++|..||.
T Consensus       133 p~nil~---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~  209 (290)
T cd05613         133 LENILL---DSNGHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFT  209 (290)
T ss_pred             HHHeEE---CCCCCEEEeeCccceecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCC
Confidence            999999   677899999999987643321  22235689999999998753  46789999999999999999999996


Q ss_pred             CCCc----HHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCC-----CHHHHHcCCcccCCC
Q 009980          246 AQSN----RQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRP-----SAQELLNHPWVIGDS  306 (521)
Q Consensus       246 ~~~~----~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~-----t~~~~l~h~~~~~~~  306 (521)
                      ....    ......+.....+++    ..+++.+.+++.+||..||++||     ++.+++.||||....
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~  275 (290)
T cd05613         210 VDGEKNSQAEISRRILKSEPPYP----QEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKIN  275 (290)
T ss_pred             cCCccccHHHHHHHhhccCCCCC----ccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCC
Confidence            4332    233333333333322    45789999999999999999997     899999999997543

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=100.00  E-value=1.4e-40  Score=334.97  Aligned_cols=256  Identities=24%  Similarity=0.393  Sum_probs=204.2

Q ss_pred             ccccceeecccccccCceEEEEeEEccCC---CcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCG---ETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDAL   83 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (521)
                      .-.++|++++.||+|+||.||+|.+...+   .+..||||++......                           .....
T Consensus        34 ~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~---------------------------~~~~~   86 (400)
T cd05105          34 FPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARS---------------------------SEKQA   86 (400)
T ss_pred             ccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCCh---------------------------HHHHH
Confidence            33578889999999999999999875321   2356999998542211                           12345


Q ss_pred             HHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc---------------------------
Q 009980           84 LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ---------------------------  136 (521)
Q Consensus        84 ~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~---------------------------  136 (521)
                      +.+|+.+++++    ..||||+++++++...+..|||||||+||+|.+++..+                           
T Consensus        87 ~~~Ei~~l~~l----~~HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (400)
T cd05105          87 LMSELKIMTHL----GPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADES  162 (400)
T ss_pred             HHHHHHHHHhc----CCCCCeeeEEEEEccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCccccc
Confidence            88899999988    24999999999999999999999999999999887642                           


Q ss_pred             ---------------------------------------------------------------------CCCCHHHHHHH
Q 009980          137 ---------------------------------------------------------------------ERYMEVGAAAV  147 (521)
Q Consensus       137 ---------------------------------------------------------------------~~~~~~~~~~i  147 (521)
                                                                                           ..+++..+..+
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~  242 (400)
T cd05105         163 TRSYVILSFENKGDYMDMKQADTTQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSF  242 (400)
T ss_pred             ccchhhhhhcccccccccccccccccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHH
Confidence                                                                                 23677888999


Q ss_pred             HHHHHHHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC---cccccCCcccccccccccCCCCch
Q 009980          148 IRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALLQDRITSK  224 (521)
Q Consensus       148 ~~qil~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~  224 (521)
                      +.||+.||.|||++||+||||||+|||+   +.++.+||+|||+++.......   .....+++.|+|||.+.+..++.+
T Consensus       243 ~~qi~~aL~~LH~~~ivH~dikp~Nill---~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  319 (400)
T cd05105         243 TYQVARGMEFLASKNCVHRDLAARNVLL---AQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTL  319 (400)
T ss_pred             HHHHHHHHHHHHhCCeeCCCCChHhEEE---eCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCch
Confidence            9999999999999999999999999999   6677899999999975432221   123356788999999988889999


Q ss_pred             hhhHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          225 SDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       225 ~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      +|||||||++|+|++ |..||..................++  ....++..+.+++.+||..||++|||+.++.+
T Consensus       320 ~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~  392 (400)
T cd05105         320 SDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSGYRMA--KPDHATQEVYDIMVKCWNSEPEKRPSFLHLSD  392 (400)
T ss_pred             hhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHHhcCCCCC--CCccCCHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence            999999999999997 9999987654433333333322222  22468899999999999999999999988876

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=100.00  E-value=1.5e-40  Score=325.01  Aligned_cols=261  Identities=27%  Similarity=0.453  Sum_probs=210.5

Q ss_pred             ccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHH
Q 009980            5 TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALL   84 (521)
Q Consensus         5 ~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (521)
                      ++...++|++.+.||.|+||.||+|.++.  +++.||+|.++......                          .....+
T Consensus         2 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~--~~~~v~iK~~~~~~~~~--------------------------~~~~~~   53 (302)
T cd07864           2 GKRCVDKFDIIGQIGEGTYGQVYKARDKD--TGELVALKKVRLDNEKE--------------------------GFPITA   53 (302)
T ss_pred             chhhhhhhheeeeecccCCEEEEEEEECC--CCcEEEEEEEeeccccc--------------------------CchHHH
Confidence            34567899999999999999999999987  77899999986532211                          112346


Q ss_pred             HHHHHHHHHHhhccCCCCCccceeEEEEeCC----------eEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHH
Q 009980           85 TNEILVMRKIVENVSPHPNVIDLYDVYEDQN----------GVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAE  153 (521)
Q Consensus        85 ~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~----------~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~  153 (521)
                      .+|+.+++++     +||||+++++++.+..          .+|+||||+.+ +|.+.+... ..+++..+..++.|++.
T Consensus        54 ~~e~~~~~~l-----~h~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~  127 (302)
T cd07864          54 IREIKILRQL-----NHRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLE  127 (302)
T ss_pred             HHHHHHHHhC-----CCCCeeeeeheecCcchhhhccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHH
Confidence            7899999998     9999999999987655          89999999987 676766653 46899999999999999


Q ss_pred             HHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC--CcccccCCccccccccccc-CCCCchhhhHHH
Q 009980          154 GLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD--PVVGLFGSIDYVSPEALLQ-DRITSKSDMWSL  230 (521)
Q Consensus       154 al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~~Diwsl  230 (521)
                      ||.|||+.||+|+||||+||++   +.++.+||+|||++.......  ......+++.|+|||.+.+ ..++.++||||+
T Consensus       128 aL~~LH~~~i~H~dl~p~nili---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~sl  204 (302)
T cd07864         128 GLNYCHKKNFLHRDIKCSNILL---NNKGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSC  204 (302)
T ss_pred             HHHHHHhCCeecCCCCHHHEEE---CCCCcEEeCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHH
Confidence            9999999999999999999999   778899999999997654322  1222346788999998864 356889999999


Q ss_pred             HHHHHHHHhCCCCCCCCCcHHHHHHHHcCCCCCc--------------------------hhhhhccCHHHHHHHHHhcc
Q 009980          231 GVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFY--------------------------EQTWKNISSSAKQLISSLLT  284 (521)
Q Consensus       231 G~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~--------------------------~~~~~~~s~~~~~li~~~l~  284 (521)
                      ||++|+|++|++||...+..+....+........                          ...+..+|..+.+++.+||.
T Consensus       205 G~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  284 (302)
T cd07864         205 GCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLT  284 (302)
T ss_pred             HHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHcc
Confidence            9999999999999987766555444433211100                          11234578999999999999


Q ss_pred             CCCCCCCCHHHHHcCCcc
Q 009980          285 VDPNRRPSAQELLNHPWV  302 (521)
Q Consensus       285 ~dp~~R~t~~~~l~h~~~  302 (521)
                      .||.+|||+.+++.||||
T Consensus       285 ~~P~~Rp~~~~il~~~~~  302 (302)
T cd07864         285 LDPSKRCTAEEALNSPWL  302 (302)
T ss_pred             CChhhCCCHHHHhcCCCC
Confidence            999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=100.00  E-value=2.5e-40  Score=320.85  Aligned_cols=254  Identities=29%  Similarity=0.451  Sum_probs=208.8

Q ss_pred             eeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHH
Q 009980           12 YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVM   91 (521)
Q Consensus        12 Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l   91 (521)
                      |++.+.||.|+||.||+|.+..  +++.||+|.+.......                          .....+.+|+.++
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~--~~~~~~~K~~~~~~~~~--------------------------~~~~~~~~e~~~l   52 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKK--TGELVALKKIRMENEKE--------------------------GFPITAIREIKLL   52 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECC--CCeEEEEEEEecccccc--------------------------cchHHHHHHHHHH
Confidence            7889999999999999999987  77899999997543110                          1123477899999


Q ss_pred             HHHhhccCCCCCccceeEEEEeC--CeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 009980           92 RKIVENVSPHPNVIDLYDVYEDQ--NGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQANIVHRDL  168 (521)
Q Consensus        92 ~~l~~~~~~hpniv~~~~~~~~~--~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~~~i~H~dl  168 (521)
                      +++     +|||++++++++...  +..|+||||+.+ +|.+.+... ..+++..+..++.||+.||.|||+.|++|+||
T Consensus        53 ~~l-----~~~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl  126 (287)
T cd07840          53 QKL-----RHPNIVRLKEIVTSKGKGSIYMVFEYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDI  126 (287)
T ss_pred             Hhc-----cCCCeeeheeeEecCCCCcEEEEeccccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccC
Confidence            998     899999999999988  899999999975 888888765 57999999999999999999999999999999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCccCCCCC--CcccccCCccccccccccc-CCCCchhhhHHHHHHHHHHHhCCCCCC
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSSVEGYTD--PVVGLFGSIDYVSPEALLQ-DRITSKSDMWSLGVILYILLSGYPPFI  245 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~ll~g~~pf~  245 (521)
                      +|+||++   +.++.++|+|||++.......  ......+++.|+|||.+.+ ..++.++||||+|+++|+|++|+.||.
T Consensus       127 ~p~nil~---~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~  203 (287)
T cd07840         127 KGSNILI---NNDGVLKLADFGLARPYTKRNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQ  203 (287)
T ss_pred             cHHHeEE---cCCCCEEEccccceeeccCCCcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCC
Confidence            9999999   778899999999997654332  1233457888999998764 457899999999999999999999998


Q ss_pred             CCCcHHHHHHHHcCCCCCchh--------------------------hhhc-cCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          246 AQSNRQKQQMIMAGEFSFYEQ--------------------------TWKN-ISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       246 ~~~~~~~~~~i~~~~~~~~~~--------------------------~~~~-~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      ..+.......+..........                          .... +++.+.+++.+||..+|.+|||+.+++.
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~  283 (287)
T cd07840         204 GSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ  283 (287)
T ss_pred             CCChHHHHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence            877665555444321111111                          1122 3889999999999999999999999999


Q ss_pred             CCcc
Q 009980          299 HPWV  302 (521)
Q Consensus       299 h~~~  302 (521)
                      ||||
T Consensus       284 ~~~~  287 (287)
T cd07840         284 HEYF  287 (287)
T ss_pred             CcCC
Confidence            9997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=100.00  E-value=2.4e-40  Score=314.75  Aligned_cols=243  Identities=28%  Similarity=0.442  Sum_probs=201.0

Q ss_pred             ccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHHh
Q 009980           16 DILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIV   95 (521)
Q Consensus        16 ~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~   95 (521)
                      +.||+|+||.||+|+++.  +++.||+|.+.....                           ......+.+|+.+++++ 
T Consensus         1 ~~lg~g~~g~vy~~~~~~--~~~~~a~k~~~~~~~---------------------------~~~~~~~~~e~~~l~~l-   50 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRA--DNTPVAVKSCRETLP---------------------------PDLKAKFLQEARILKQY-   50 (252)
T ss_pred             CccCcccCccEEEEEEec--CCceEEEEecCccCC---------------------------HHHHHHHHHHHHHHHhC-
Confidence            479999999999999987  788999998753211                           11234578899999998 


Q ss_pred             hccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q 009980           96 ENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCL  174 (521)
Q Consensus        96 ~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil  174 (521)
                          +||||+++++++...+..|+||||+.|++|.+++... ..+++..+..++.|++.||.|||++|++||||||+||+
T Consensus        51 ----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil  126 (252)
T cd05084          51 ----SHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCL  126 (252)
T ss_pred             ----CCCCcceEEEEEcCCCCeEEEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEE
Confidence                9999999999999999999999999999999998764 45899999999999999999999999999999999999


Q ss_pred             EeeCCCCCCEEEeecCCCccCCCCCCc---ccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCCcH
Q 009980          175 FLNDREDSPLKIMDFGLSSVEGYTDPV---VGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNR  250 (521)
Q Consensus       175 ~~~~~~~~~~kl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~  250 (521)
                      +   +.++.+||+|||++.........   ....++..|+|||.+.++.++.++||||||+++|+|++ |.+||...+..
T Consensus       127 ~---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~  203 (252)
T cd05084         127 V---TEKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQ  203 (252)
T ss_pred             E---cCCCcEEECccccCcccccccccccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHH
Confidence            9   66788999999998754321111   11123456999999988889999999999999999998 99999877766


Q ss_pred             HHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          251 QKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       251 ~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      .....+......   .....++..+.+++.+||..+|++|||+.++++
T Consensus       204 ~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~  248 (252)
T cd05084         204 QTREAIEQGVRL---PCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQ  248 (252)
T ss_pred             HHHHHHHcCCCC---CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            665555543222   123457899999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=100.00  E-value=2.3e-40  Score=325.80  Aligned_cols=261  Identities=27%  Similarity=0.422  Sum_probs=202.0

Q ss_pred             ceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHH
Q 009980           11 EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILV   90 (521)
Q Consensus        11 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   90 (521)
                      +|++.+.||+|+||.||+|.++..++++.||+|.+.......                         ......+.+|+.+
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~-------------------------~~~~~~~~~e~~~   55 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQY-------------------------TGISQSACREIAL   55 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccc-------------------------cCccHHHHHHHHH
Confidence            589999999999999999999764457899999987532111                         0112346789999


Q ss_pred             HHHHhhccCCCCCccceeEEEEeC--CeEEEEEeccCCCchHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 009980           91 MRKIVENVSPHPNVIDLYDVYEDQ--NGVHLILELCSGGELFDRIVAQ-----ERYMEVGAAAVIRQIAEGLAALHQANI  163 (521)
Q Consensus        91 l~~l~~~~~~hpniv~~~~~~~~~--~~~~lv~e~~~gg~L~~~l~~~-----~~~~~~~~~~i~~qil~al~~lH~~~i  163 (521)
                      ++++     +||||+++++++.+.  ..+|+||||+.+ +|.+.+...     ..+++..+..++.||+.||.|||++||
T Consensus        56 l~~l-----~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i  129 (316)
T cd07842          56 LREL-----KHENVVSLVEVFLEHADKSVYLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWV  129 (316)
T ss_pred             HHhc-----CCCCccceEEEEeCCCCceEEEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCE
Confidence            9998     999999999999988  889999999975 676666432     368999999999999999999999999


Q ss_pred             eeccCCCCcEEEee-CCCCCCEEEeecCCCccCCCCC----CcccccCCccccccccccc-CCCCchhhhHHHHHHHHHH
Q 009980          164 VHRDLKPENCLFLN-DREDSPLKIMDFGLSSVEGYTD----PVVGLFGSIDYVSPEALLQ-DRITSKSDMWSLGVILYIL  237 (521)
Q Consensus       164 ~H~dlkp~Nil~~~-~~~~~~~kl~Dfg~a~~~~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~l  237 (521)
                      +||||||+||++.. .+..+.+||+|||++.......    ......+|+.|+|||.+.+ ..++.++|||||||++|+|
T Consensus       130 ~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l  209 (316)
T cd07842         130 LHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAEL  209 (316)
T ss_pred             eeCCCCHHHEEEcCCCCccceEEECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHH
Confidence            99999999999932 1127889999999987643221    1233467899999998865 4578999999999999999


Q ss_pred             HhCCCCCCCCCcHH---------HHHHHHc--------------------------CCCCCc-------hhhhhccCHHH
Q 009980          238 LSGYPPFIAQSNRQ---------KQQMIMA--------------------------GEFSFY-------EQTWKNISSSA  275 (521)
Q Consensus       238 l~g~~pf~~~~~~~---------~~~~i~~--------------------------~~~~~~-------~~~~~~~s~~~  275 (521)
                      ++|.+||.+.....         ....+..                          ....++       ...+...+..+
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (316)
T cd07842         210 LTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQG  289 (316)
T ss_pred             HhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHH
Confidence            99999997654432         0000000                          000000       00112567889


Q ss_pred             HHHHHHhccCCCCCCCCHHHHHcCCcc
Q 009980          276 KQLISSLLTVDPNRRPSAQELLNHPWV  302 (521)
Q Consensus       276 ~~li~~~l~~dp~~R~t~~~~l~h~~~  302 (521)
                      .+++.+||..||++|||+.++++||||
T Consensus       290 ~~~i~~~l~~~P~~Rps~~eil~~~~f  316 (316)
T cd07842         290 FDLLRKLLEYDPTKRITAEEALEHPYF  316 (316)
T ss_pred             HHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence            999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.4e-40  Score=315.50  Aligned_cols=247  Identities=28%  Similarity=0.424  Sum_probs=206.9

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      .+|++.+.||+|+||.||+|.++   .+..+|+|++.+...                             ....+.+|+.
T Consensus         4 ~~~~~~~~lg~G~~~~v~~~~~~---~~~~~~iK~~~~~~~-----------------------------~~~~~~~e~~   51 (256)
T cd05059           4 SELTFLKELGSGQFGVVHLGKWR---GKIDVAIKMIREGAM-----------------------------SEDDFIEEAK   51 (256)
T ss_pred             HHcchhhhhccCCCceEEEeEec---CCccEEEEEeccCCC-----------------------------CHHHHHHHHH
Confidence            46899999999999999999876   356799999853211                             1334778999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQANIVHRDL  168 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~~~i~H~dl  168 (521)
                      +++++     +||||+++++++...+..|+||||++|++|.+++... +.+++..+..++.|++.||.|||++|++||||
T Consensus        52 ~l~~l-----~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl  126 (256)
T cd05059          52 VMMKL-----SHPNLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDL  126 (256)
T ss_pred             HHHhC-----CCCCEEEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccc
Confidence            99998     9999999999999999999999999999999998753 46899999999999999999999999999999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCccCCCCCCc--ccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CCCCCC
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSSVEGYTDPV--VGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFI  245 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~pf~  245 (521)
                      ||+||++   +.++.+||+|||+++........  ....++..|+|||.+.+..++.++|+||+|+++|+|++ |.+||.
T Consensus       127 ~p~ni~i---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~  203 (256)
T cd05059         127 AARNCLV---GEDNVVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYE  203 (256)
T ss_pred             cHhhEEE---CCCCcEEECCcccceecccccccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCC
Confidence            9999999   67788999999998754322111  11223457999999998899999999999999999999 899998


Q ss_pred             CCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          246 AQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       246 ~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      ..+..+....+..+...   .....+|..+.+++.+||..+|++|||+.++++.
T Consensus       204 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~  254 (256)
T cd05059         204 RFSNSEVVESVSAGYRL---YRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQ  254 (256)
T ss_pred             CCCHHHHHHHHHcCCcC---CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence            87777777766654321   1224579999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=100.00  E-value=2.9e-40  Score=316.78  Aligned_cols=253  Identities=28%  Similarity=0.376  Sum_probs=210.8

Q ss_pred             ccceeecccccccCceEEEEeEEccC-CCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTC-GETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      .++|++.+.||+|+||.||+|..+.. ++...||||.++....                           ......+.+|
T Consensus         3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~---------------------------~~~~~~~~~e   55 (266)
T cd05033           3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSS---------------------------DKQRLDFLTE   55 (266)
T ss_pred             hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCC---------------------------hHHHHHHHHH
Confidence            36799999999999999999998753 2346799998754211                           1223457789


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQANIVHR  166 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~~~i~H~  166 (521)
                      +.+++++     +||||+++++++...+..++||||+.|++|.+++... +.+++..+..++.|++.||.|||++||+||
T Consensus        56 ~~~l~~l-----~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~  130 (266)
T cd05033          56 ASIMGQF-----DHPNIIRLEGVVTKSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHR  130 (266)
T ss_pred             HHHHHhC-----CCCCcceEeEEEecCCceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence            9999998     9999999999999999999999999999999998764 478999999999999999999999999999


Q ss_pred             cCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC-Cc--ccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CCC
Q 009980          167 DLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD-PV--VGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYP  242 (521)
Q Consensus       167 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~  242 (521)
                      ||||+||++   +.++.++|+|||++....... ..  ....+++.|+|||.+.+..++.++||||||+++|+|++ |..
T Consensus       131 di~p~nili---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~  207 (266)
T cd05033         131 DLAARNILV---NSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGER  207 (266)
T ss_pred             CCCcceEEE---cCCCCEEECccchhhcccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCC
Confidence            999999999   777889999999998754211 11  12234678999999998889999999999999999998 999


Q ss_pred             CCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          243 PFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       243 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      ||......+....+..+.....   ...++..+.+++.+||+.+|++||++.+++++
T Consensus       208 p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~  261 (266)
T cd05033         208 PYWDMSNQDVIKAVEDGYRLPP---PMDCPSALYQLMLDCWQKDRNERPTFSQIVST  261 (266)
T ss_pred             CCCCCCHHHHHHHHHcCCCCCC---CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            9988777777776665432211   24578999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.6e-40  Score=313.95  Aligned_cols=246  Identities=33%  Similarity=0.536  Sum_probs=213.1

Q ss_pred             ccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHHhhc
Q 009980           18 LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVEN   97 (521)
Q Consensus        18 lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~   97 (521)
                      ||.|+||.||+|.+..  +++.||+|++.+......                         .....+..|+.+++++   
T Consensus         1 lg~G~~~~v~~~~~~~--~~~~~~~k~~~~~~~~~~-------------------------~~~~~~~~e~~~l~~l---   50 (250)
T cd05123           1 LGKGSFGKVLLVRKKD--TGKLYAMKVLKKKKIIKR-------------------------KEVEHTLTERNILSRI---   50 (250)
T ss_pred             CCCCCceEEEEEEECC--CCcEEEEEEeehhhhcch-------------------------HHHHHHHHHHHHHHHc---
Confidence            7999999999999987  788999999876432210                         1234578899999998   


Q ss_pred             cCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEee
Q 009980           98 VSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLN  177 (521)
Q Consensus        98 ~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~~~  177 (521)
                        +||||+++++.++.++..|+||||+.+++|.+++.....+++..+..++.|++.||.|||+.+++|+||+|+||++  
T Consensus        51 --~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~--  126 (250)
T cd05123          51 --NHPFIVKLHYAFQTEEKLYLVLEYAPGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILL--  126 (250)
T ss_pred             --CCCcHHHHHHHeecCCeeEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEE--
Confidence              8999999999999999999999999999999999988889999999999999999999999999999999999999  


Q ss_pred             CCCCCCEEEeecCCCccCCCC-CCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCcHHHHHHH
Q 009980          178 DREDSPLKIMDFGLSSVEGYT-DPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMI  256 (521)
Q Consensus       178 ~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i  256 (521)
                       +.++.++|+|||.+...... .......++..|+|||.+.+..++.++|+||||+++|++++|..||...+.......+
T Consensus       127 -~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~  205 (250)
T cd05123         127 -DADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKI  205 (250)
T ss_pred             -cCCCcEEEeecCcceecccCCCcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence             66788999999998765433 2233456888999999998888899999999999999999999999887776667776


Q ss_pred             HcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCH---HHHHcCCcc
Q 009980          257 MAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSA---QELLNHPWV  302 (521)
Q Consensus       257 ~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~---~~~l~h~~~  302 (521)
                      ......++    ..++..+.+++.+||..||++|||+   .++++||||
T Consensus       206 ~~~~~~~~----~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f  250 (250)
T cd05123         206 LKDPLRFP----EFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPFF  250 (250)
T ss_pred             hcCCCCCC----CCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence            66554443    3468999999999999999999999   999999997

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=100.00  E-value=1.6e-40  Score=326.09  Aligned_cols=258  Identities=26%  Similarity=0.419  Sum_probs=205.7

Q ss_pred             cccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      ..++|++.+.||.|+||.||+|.++.  +++.||||.+.......                          .......+|
T Consensus         6 ~~~~y~~~~~lg~g~~~~v~~~~~~~--~~~~~~ik~~~~~~~~~--------------------------~~~~~~~~e   57 (311)
T cd07866           6 KLRDYEILGKLGEGTFGEVYKARQIK--TGRVVALKKILMHNEKD--------------------------GFPITALRE   57 (311)
T ss_pred             ccccEEEEEEeccCCCEEEEEEEECC--CCcEEEEEEEEeccCCC--------------------------CcchhHHHH
Confidence            36899999999999999999999987  78899999986533221                          011235689


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEeC--------CeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHH
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYEDQ--------NGVHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAAL  158 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~~--------~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~al~~l  158 (521)
                      +.+++++     +||||+++++++...        ..+|+||||+.+ +|...+.. ...+++..+..++.|++.||.||
T Consensus        58 ~~~l~~l-----~h~~i~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~l  131 (311)
T cd07866          58 IKILKKL-----KHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYL  131 (311)
T ss_pred             HHHHHhc-----CCCCccchhhheecccccccccCceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHH
Confidence            9999998     999999999987543        357999999975 67666654 45799999999999999999999


Q ss_pred             HHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC------------cccccCCcccccccccccC-CCCchh
Q 009980          159 HQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP------------VVGLFGSIDYVSPEALLQD-RITSKS  225 (521)
Q Consensus       159 H~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~------------~~~~~gt~~y~aPE~~~~~-~~~~~~  225 (521)
                      |++||+|+||||+||++   +.++.++|+|||++........            .....|++.|+|||.+.+. .++.++
T Consensus       132 H~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~  208 (311)
T cd07866         132 HENHILHRDIKAANILI---DNQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAV  208 (311)
T ss_pred             HhCCeecCCCCHHHEEE---CCCCCEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchh
Confidence            99999999999999999   7788999999999975432211            1223578889999987653 578999


Q ss_pred             hhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHcCCCCCc--------------------------hhhhhccCHHHHHHH
Q 009980          226 DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFY--------------------------EQTWKNISSSAKQLI  279 (521)
Q Consensus       226 DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~--------------------------~~~~~~~s~~~~~li  279 (521)
                      ||||+||++|+|++|++||.+.+.......+........                          ...+..+++.+.++|
T Consensus       209 Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  288 (311)
T cd07866         209 DIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLL  288 (311)
T ss_pred             HhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHH
Confidence            999999999999999999988776655544432111100                          111234567899999


Q ss_pred             HHhccCCCCCCCCHHHHHcCCcc
Q 009980          280 SSLLTVDPNRRPSAQELLNHPWV  302 (521)
Q Consensus       280 ~~~l~~dp~~R~t~~~~l~h~~~  302 (521)
                      .+||..||.+|||+.+++.||||
T Consensus       289 ~~~l~~~p~~R~t~~ell~~~~f  311 (311)
T cd07866         289 SKLLSLDPYKRLTASDALEHPYF  311 (311)
T ss_pred             HHHcccCcccCcCHHHHhcCCCC
Confidence            99999999999999999999997

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=100.00  E-value=7.2e-42  Score=333.64  Aligned_cols=254  Identities=28%  Similarity=0.427  Sum_probs=212.5

Q ss_pred             ccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHH
Q 009980            5 TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALL   84 (521)
Q Consensus         5 ~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (521)
                      .+...++..++..||+|.||+||+|++..     .||||+++......                          ..-+.|
T Consensus       387 WeIp~~ev~l~~rIGsGsFGtV~Rg~whG-----dVAVK~Lnv~~pt~--------------------------~qlqaF  435 (678)
T KOG0193|consen  387 WEIPPEEVLLGERIGSGSFGTVYRGRWHG-----DVAVKLLNVDDPTP--------------------------EQLQAF  435 (678)
T ss_pred             cccCHHHhhccceeccccccceeeccccc-----ceEEEEEecCCCCH--------------------------HHHHHH
Confidence            34445566778999999999999999864     49999998654432                          234669


Q ss_pred             HHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 009980           85 TNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQANI  163 (521)
Q Consensus        85 ~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~al~~lH~~~i  163 (521)
                      ++|+..+++-     +|-||+-+.+++..+.. .||+.+|+|.+|+.++.- ...|.....+.|++|++.|+.|||.++|
T Consensus       436 KnEVa~lkkT-----RH~NIlLFMG~~~~p~~-AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~I  509 (678)
T KOG0193|consen  436 KNEVAVLKKT-----RHENILLFMGACMNPPL-AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNI  509 (678)
T ss_pred             HHHHHHHhhc-----chhhheeeehhhcCCce-eeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhh
Confidence            9999999998     99999999999988887 999999999999998864 3568888999999999999999999999


Q ss_pred             eeccCCCCcEEEeeCCCCCCEEEeecCCCccCC---CCCCcccccCCccccccccccc---CCCCchhhhHHHHHHHHHH
Q 009980          164 VHRDLKPENCLFLNDREDSPLKIMDFGLSSVEG---YTDPVVGLFGSIDYVSPEALLQ---DRITSKSDMWSLGVILYIL  237 (521)
Q Consensus       164 ~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwslG~il~~l  237 (521)
                      +|||||..||++   .++++|||+|||++....   .........|...|||||++..   .+|++.+||||+|+++|||
T Consensus       510 IHrDLKSnNIFl---~~~~kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YEL  586 (678)
T KOG0193|consen  510 IHRDLKSNNIFL---HEDLKVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYEL  586 (678)
T ss_pred             hhhhccccceEE---ccCCcEEEecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHH
Confidence            999999999999   677999999999996432   2233344568889999999873   4789999999999999999


Q ss_pred             HhCCCCCCCCCcHHHHHHHHcCCCCCc-hhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          238 LSGYPPFIAQSNRQKQQMIMAGEFSFY-EQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       238 l~g~~pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      ++|..||.....++++-++-+|..... .....++++++++|+..||..++++||++.+||.
T Consensus       587 ltg~lPysi~~~dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~  648 (678)
T KOG0193|consen  587 LTGELPYSIQNRDQIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLS  648 (678)
T ss_pred             HhCcCCcCCCChhheEEEecccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence            999999997777777666666644322 2334568889999999999999999999999986

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=100.00  E-value=2.5e-40  Score=321.40  Aligned_cols=257  Identities=27%  Similarity=0.459  Sum_probs=213.3

Q ss_pred             ceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHH
Q 009980           11 EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILV   90 (521)
Q Consensus        11 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   90 (521)
                      .|+....||+|+||.||+|..+.  +++.||||.+....                            ......+.+|+.+
T Consensus        21 ~~~~~~~lg~g~~g~v~~~~~~~--~~~~v~iK~~~~~~----------------------------~~~~~~~~~e~~~   70 (292)
T cd06657          21 YLDNFIKIGEGSTGIVCIATVKS--SGKLVAVKKMDLRK----------------------------QQRRELLFNEVVI   70 (292)
T ss_pred             HhhhHHHcCCCCCeEEEEEEEcC--CCeEEEEEEecccc----------------------------hhHHHHHHHHHHH
Confidence            34445689999999999999987  78899999874211                            0224558889999


Q ss_pred             HHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCC
Q 009980           91 MRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKP  170 (521)
Q Consensus        91 l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp  170 (521)
                      ++.+     +||||+++++.+...+..|+||||+++++|.+++. .+.+++..+..++.|++.||+|||++|++||||+|
T Consensus        71 l~~l-----~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p  144 (292)
T cd06657          71 MRDY-----QHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVT-HTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKS  144 (292)
T ss_pred             HHhc-----CCcchhheeeEEEeCCEEEEEEecCCCCcHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCH
Confidence            9998     99999999999999999999999999999988764 45689999999999999999999999999999999


Q ss_pred             CcEEEeeCCCCCCEEEeecCCCccCCCCC-CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCc
Q 009980          171 ENCLFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSN  249 (521)
Q Consensus       171 ~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~  249 (521)
                      +||++   +.++.++|+|||++....... ......|++.|+|||.+.+..++.++|+||+|+++|+|++|.+||.+...
T Consensus       145 ~Nilv---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~  221 (292)
T cd06657         145 DSILL---THDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP  221 (292)
T ss_pred             HHEEE---CCCCCEEEcccccceecccccccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence            99999   677889999999886543221 12334688999999999888889999999999999999999999988766


Q ss_pred             HHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCCC
Q 009980          250 RQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSA  307 (521)
Q Consensus       250 ~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~~  307 (521)
                      .+....+...... .......+++.+.+++.+||..+|.+||++.+++.||||.....
T Consensus       222 ~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~~  278 (292)
T cd06657         222 LKAMKMIRDNLPP-KLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP  278 (292)
T ss_pred             HHHHHHHHhhCCc-ccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcChHHhccCC
Confidence            6555554433221 22223457899999999999999999999999999999976543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=100.00  E-value=2.7e-40  Score=320.06  Aligned_cols=252  Identities=25%  Similarity=0.393  Sum_probs=208.5

Q ss_pred             cceeecccccccCceEEEEeEEccC--CCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTC--GETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      ++|++.+.||+|+||.||+|....+  ..+..||+|.+.....                           ......+.+|
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~---------------------------~~~~~~~~~E   57 (283)
T cd05090           5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINN---------------------------PQQWGEFQQE   57 (283)
T ss_pred             hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCC---------------------------HHHHHHHHHH
Confidence            6799999999999999999986432  1557899999863211                           0122457889


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-----------------CCCCHHHHHHHHHH
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-----------------ERYMEVGAAAVIRQ  150 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-----------------~~~~~~~~~~i~~q  150 (521)
                      +.+++++     +||||+++++++......|+||||+.+++|.+++...                 ..+++..+..++.|
T Consensus        58 ~~~l~~l-----~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  132 (283)
T cd05090          58 ASLMAEL-----HHPNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQ  132 (283)
T ss_pred             HHHHhhC-----CCCCeeeEEEEEecCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHH
Confidence            9999998     9999999999999999999999999999999988532                 23788889999999


Q ss_pred             HHHHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC---CcccccCCcccccccccccCCCCchhhh
Q 009980          151 IAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD---PVVGLFGSIDYVSPEALLQDRITSKSDM  227 (521)
Q Consensus       151 il~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Di  227 (521)
                      ++.||.|||++|++||||||+||++   +.++.+||+|||+++......   ......++..|+|||.+.+..++.++|+
T Consensus       133 i~~al~~lH~~~i~H~dlkp~nili---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv  209 (283)
T cd05090         133 IAAGMEYLSSHFFVHKDLAARNILI---GEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDI  209 (283)
T ss_pred             HHHHHHHHHhcCeehhccccceEEE---cCCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhh
Confidence            9999999999999999999999999   667889999999997643221   1223346678999999988889999999


Q ss_pred             HHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          228 WSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       228 wslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      |||||++|+|++ |.+||.+.+.......+.......   .+..+++.+++++.+||+.||.+||++.+++++
T Consensus       210 ~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~  279 (283)
T cd05090         210 WSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRKRQLLP---CSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR  279 (283)
T ss_pred             HHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCC---CCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence            999999999998 999998877766666665544322   235689999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=100.00  E-value=1.2e-40  Score=329.22  Aligned_cols=254  Identities=22%  Similarity=0.276  Sum_probs=199.9

Q ss_pred             ccccccc--CceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHH
Q 009980           15 TDILGRG--GFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMR   92 (521)
Q Consensus        15 ~~~lG~G--~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   92 (521)
                      ...||+|  +||+||+|.++.  +++.||+|++.......                          ...+.+.+|+.+++
T Consensus         3 ~~~ig~g~~~~~~v~~a~~~~--~~~~vaiK~~~~~~~~~--------------------------~~~~~~~~e~~~~~   54 (328)
T cd08226           3 QVEIGRGFCNLTSVYLARHTP--TGTLVTVRITDLENCTE--------------------------EHLKALQNEVVLSH   54 (328)
T ss_pred             HHHhCCcccCceeEEEEEEcC--CCcEEEEEEeccccCCH--------------------------HHHHHHHHHHHHHH
Confidence            3567777  999999999987  78999999986432110                          12345788888888


Q ss_pred             HHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCC
Q 009980           93 KIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ--ERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKP  170 (521)
Q Consensus        93 ~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp  170 (521)
                      .+     +||||+++++++..++..|+||||+.+++|.+++...  ..+++..+..++.|++.||.|||++||+||||||
T Consensus        55 ~l-----~h~niv~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp  129 (328)
T cd08226          55 FF-----RHPNIMTSWTVFTTGSWLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKA  129 (328)
T ss_pred             hC-----CCCCcceEeeeEecCCceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCH
Confidence            77     9999999999999999999999999999999988764  3589999999999999999999999999999999


Q ss_pred             CcEEEeeCCCCCCEEEeecCCCccCCCC-CC-------cccccCCcccccccccccC--CCCchhhhHHHHHHHHHHHhC
Q 009980          171 ENCLFLNDREDSPLKIMDFGLSSVEGYT-DP-------VVGLFGSIDYVSPEALLQD--RITSKSDMWSLGVILYILLSG  240 (521)
Q Consensus       171 ~Nil~~~~~~~~~~kl~Dfg~a~~~~~~-~~-------~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~~ll~g  240 (521)
                      +||++   +.++.++++||+.+...... ..       .....++..|+|||++.+.  .++.++||||+||++|+|++|
T Consensus       130 ~Nill---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g  206 (328)
T cd08226         130 SHILI---SGDGLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATG  206 (328)
T ss_pred             HHEEE---eCCCcEEEechHHHhhhhccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhC
Confidence            99999   66788999999754322110 00       0112356679999999763  478999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHHcCCCCCc-------------------------------------------hhhhhccCHHHHH
Q 009980          241 YPPFIAQSNRQKQQMIMAGEFSFY-------------------------------------------EQTWKNISSSAKQ  277 (521)
Q Consensus       241 ~~pf~~~~~~~~~~~i~~~~~~~~-------------------------------------------~~~~~~~s~~~~~  277 (521)
                      .+||.+.................+                                           ......+++.+++
T Consensus       207 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (328)
T cd08226         207 RVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQN  286 (328)
T ss_pred             CCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHH
Confidence            999987765544433332211100                                           1112346778999


Q ss_pred             HHHHhccCCCCCCCCHHHHHcCCcccC
Q 009980          278 LISSLLTVDPNRRPSAQELLNHPWVIG  304 (521)
Q Consensus       278 li~~~l~~dp~~R~t~~~~l~h~~~~~  304 (521)
                      |+++||+.||++|||+.++|+||||..
T Consensus       287 li~~~l~~dP~~Rpta~e~l~~~~~~~  313 (328)
T cd08226         287 LVELCLQQDPEKRPSASSLLSHAFFKQ  313 (328)
T ss_pred             HHHHHccCCcccCCCHHHHhhCHHHHH
Confidence            999999999999999999999999964

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=5.6e-40  Score=313.91  Aligned_cols=248  Identities=27%  Similarity=0.381  Sum_probs=208.3

Q ss_pred             cccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      ..++|++.+.||+|++|.||+|...   .++.||+|.+.....                             ....+.+|
T Consensus         4 ~~~~~~~~~~lg~g~~~~v~~~~~~---~~~~v~iK~~~~~~~-----------------------------~~~~~~~e   51 (261)
T cd05068           4 DRTSIQLLRKLGAGQFGEVWEGLWN---NTTPVAVKTLKPGTM-----------------------------DPKDFLAE   51 (261)
T ss_pred             chhheeeEEEecccCCccEEEEEec---CCeEEEEEeeCCCcc-----------------------------cHHHHHHH
Confidence            4578999999999999999999875   346799999854211                             13457889


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE--RYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      +.+++++     +||||+++++++...+..|+||||+.|++|.+++....  .+++..+..++.|++.||.|||++|++|
T Consensus        52 ~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H  126 (261)
T cd05068          52 AQIMKKL-----RHPKLIQLYAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIH  126 (261)
T ss_pred             HHHHHHC-----CCCCccceeEEEecCCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeee
Confidence            9999998     99999999999999999999999999999999997654  6899999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC--cccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CCC
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP--VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYP  242 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~  242 (521)
                      |||||+||++   +.++.++|+|||++........  .....++..|+|||.+.+..++.++|+||||+++|+|++ |++
T Consensus       127 ~dl~p~Nil~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~  203 (261)
T cd05068         127 RDLAARNVLV---GENNICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRM  203 (261)
T ss_pred             ccCCcceEEE---cCCCCEEECCcceEEEccCCcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCC
Confidence            9999999999   7778899999999976542211  111223457999999988889999999999999999999 999


Q ss_pred             CCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          243 PFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       243 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      ||.+.+.......+..... .+  ....++..+.+++.+||+.+|.+||++.++++
T Consensus       204 p~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~  256 (261)
T cd05068         204 PYPGMTNAEVLQQVDQGYR-MP--CPPGCPKELYDIMLDCWKEDPDDRPTFETLQW  256 (261)
T ss_pred             CCCCCCHHHHHHHHHcCCC-CC--CCCcCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence            9988887777766655422 11  12457899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=100.00  E-value=2.2e-40  Score=320.57  Aligned_cols=254  Identities=31%  Similarity=0.463  Sum_probs=209.8

Q ss_pred             eeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHH
Q 009980           12 YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVM   91 (521)
Q Consensus        12 Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l   91 (521)
                      |++.+.||.|++|.||+|.+..  +++.+|+|.+.......                          .....+.+|+.++
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~--~~~~~~ik~~~~~~~~~--------------------------~~~~~~~~e~~~l   52 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKL--TGEIVAIKKIKLRFESE--------------------------GIPKTALREIKLL   52 (283)
T ss_pred             CccceeeecCCCceEEEEEcCC--CCcEEEEEEeccccccc--------------------------hhHHHHHHHHHHH
Confidence            6788999999999999999987  78899999986532210                          1234577899999


Q ss_pred             HHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCC
Q 009980           92 RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKP  170 (521)
Q Consensus        92 ~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp  170 (521)
                      +++     +||||+++++++.+++..|+||||+.+ +|.+.+.. ...+++..+..++.|++.||.|||++||+|+||+|
T Consensus        53 ~~l-----~~~~i~~~~~~~~~~~~~~~v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p  126 (283)
T cd05118          53 KEL-----NHPNIIKLLDVFRHKGDLYLVFEFMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKP  126 (283)
T ss_pred             HHh-----cCCCcchHHHhhccCCCEEEEEeccCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCH
Confidence            999     899999999999999999999999976 88887766 35789999999999999999999999999999999


Q ss_pred             CcEEEeeCCCCCCEEEeecCCCccCCCCC-CcccccCCcccccccccccC-CCCchhhhHHHHHHHHHHHhCCCCCCCCC
Q 009980          171 ENCLFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALLQD-RITSKSDMWSLGVILYILLSGYPPFIAQS  248 (521)
Q Consensus       171 ~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~  248 (521)
                      +||++   +.++.++|+|||.+....... ......++..|+|||.+.+. .++.++|+||+|+++|+|++|++||.+.+
T Consensus       127 ~nili---~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~  203 (283)
T cd05118         127 ENLLI---NTEGVLKLADFGLARSFGSPVRPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKS  203 (283)
T ss_pred             HHEEE---CCCCcEEEeeeeeeEecCCCcccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Confidence            99999   677889999999987654332 22334578899999998776 78899999999999999999999998777


Q ss_pred             cHHHHHHHHcCCCC--------------------------CchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcc
Q 009980          249 NRQKQQMIMAGEFS--------------------------FYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV  302 (521)
Q Consensus       249 ~~~~~~~i~~~~~~--------------------------~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~  302 (521)
                      ..+....+......                          .....++.++.+++++|.+||..||.+||++.++++||||
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~  283 (283)
T cd05118         204 EIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF  283 (283)
T ss_pred             HHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence            65544333221110                          0112234578899999999999999999999999999997

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=100.00  E-value=4.9e-40  Score=314.05  Aligned_cols=246  Identities=34%  Similarity=0.486  Sum_probs=210.3

Q ss_pred             ccccccCceEEEEeEEccC-CCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHH
Q 009980           16 DILGRGGFSVVRRGIKKTC-GETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKI   94 (521)
Q Consensus        16 ~~lG~G~~g~V~~a~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l   94 (521)
                      +.||+|+||.||+|..... ..+..||+|++......                           .....+.+|+..++.+
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~---------------------------~~~~~~~~e~~~l~~~   53 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASE---------------------------EERKDFLKEARVMKKL   53 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccch---------------------------hHHHHHHHHHHHHhhc
Confidence            4799999999999999862 23788999998643211                           1245688899999998


Q ss_pred             hhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           95 VENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ---------ERYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        95 ~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~---------~~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                           +||||+++++++.....+++||||++|++|.+++...         ..+++..+..++.|++.||.|||++|++|
T Consensus        54 -----~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H  128 (262)
T cd00192          54 -----GHPNVVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVH  128 (262)
T ss_pred             -----CCCChheeeeeecCCCceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCccc
Confidence                 8999999999999999999999999999999999875         78999999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC---CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CC
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD---PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GY  241 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~  241 (521)
                      |||+|+||++   +.++.++|+|||.+.......   ......+++.|+|||.+....++.++||||+|+++|+|++ |.
T Consensus       129 ~di~p~nili---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~  205 (262)
T cd00192         129 RDLAARNCLV---GEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGA  205 (262)
T ss_pred             CccCcceEEE---CCCCcEEEcccccccccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCC
Confidence            9999999999   777899999999998654432   2234457889999999988889999999999999999999 69


Q ss_pred             CCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          242 PPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       242 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      .||...+..+....+..+...   .....+|+++.+++.+||..+|.+|||+.+++++
T Consensus       206 ~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~  260 (262)
T cd00192         206 TPYPGLSNEEVLEYLRKGYRL---PKPEYCPDELYELMLSCWQLDPEDRPTFSELVER  260 (262)
T ss_pred             CCCCCCCHHHHHHHHHcCCCC---CCCccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence            999988887777777764322   1224579999999999999999999999999975

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=100.00  E-value=2.1e-40  Score=328.06  Aligned_cols=255  Identities=24%  Similarity=0.345  Sum_probs=202.3

Q ss_pred             cccceeecccccccCceEEEEeEEccC---CCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTC---GETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALL   84 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (521)
                      -.++|++.+.||+|+||.||+|+....   .+++.||+|+++.....                           .....+
T Consensus         5 ~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~---------------------------~~~~~~   57 (337)
T cd05054           5 PRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATA---------------------------SEYKAL   57 (337)
T ss_pred             CHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCH---------------------------HHHHHH
Confidence            356899999999999999999975432   14578999998532110                           112346


Q ss_pred             HHHHHHHHHHhhccCCCCCccceeEEEEe-CCeEEEEEeccCCCchHHHHHhc---------------------------
Q 009980           85 TNEILVMRKIVENVSPHPNVIDLYDVYED-QNGVHLILELCSGGELFDRIVAQ---------------------------  136 (521)
Q Consensus        85 ~~E~~~l~~l~~~~~~hpniv~~~~~~~~-~~~~~lv~e~~~gg~L~~~l~~~---------------------------  136 (521)
                      ..|+.++.++    .+||||+++++++.. ...++++|||++|++|.+++...                           
T Consensus        58 ~~E~~~~~~l----~~h~niv~~~~~~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  133 (337)
T cd05054          58 MTELKILIHI----GHHLNVVNLLGACTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRL  133 (337)
T ss_pred             HHHHHHHHhh----ccCcchhheeeeEecCCCCEEEEEecCCCCCHHHHHHhcccccccccccccccccccccccccccc
Confidence            7799988887    479999999998764 45789999999999999988542                           


Q ss_pred             ----------------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEeeCCCCC
Q 009980          137 ----------------------------------ERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDS  182 (521)
Q Consensus       137 ----------------------------------~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~~~~~~~~  182 (521)
                                                        .+++...+..++.||+.||.|||++||+||||||+|||+   +.++
T Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill---~~~~  210 (337)
T cd05054         134 DSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILL---SENN  210 (337)
T ss_pred             ccCCccccccccccccCcchhhcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEE---eCCC
Confidence                                              257889999999999999999999999999999999999   6678


Q ss_pred             CEEEeecCCCccCCCCC---CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCCcHHHHH-HHH
Q 009980          183 PLKIMDFGLSSVEGYTD---PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQ-MIM  257 (521)
Q Consensus       183 ~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~-~i~  257 (521)
                      .++|+|||++.......   ......+++.|+|||++.+..++.++||||+||++|+|++ |..||.+....+... .+.
T Consensus       211 ~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~  290 (337)
T cd05054         211 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLK  290 (337)
T ss_pred             cEEEeccccchhcccCcchhhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHh
Confidence            89999999997643221   1122345678999999999999999999999999999998 999998755444333 333


Q ss_pred             cCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          258 AGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       258 ~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      .+.....   ...+++++.+++.+||+.+|++|||+.++++|
T Consensus       291 ~~~~~~~---~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~  329 (337)
T cd05054         291 EGTRMRA---PEYATPEIYSIMLDCWHNNPEDRPTFSELVEI  329 (337)
T ss_pred             ccCCCCC---CccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            3322111   24578899999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=100.00  E-value=6.9e-40  Score=314.30  Aligned_cols=252  Identities=26%  Similarity=0.427  Sum_probs=209.2

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ++|++.+.||.|+||.||+|.++.  +++.||+|.++......                         ......+.+|+.
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~--~~~~~~ik~~~~~~~~~-------------------------~~~~~~~~~ei~   54 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLL--DGRVVALKKVQIFEMMD-------------------------AKARQDCLKEID   54 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcC--CCCEEEEEEeecccccc-------------------------hhhHHHHHHHHH
Confidence            689999999999999999999987  78899999986432211                         012345889999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA----QERYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      +++++     +||||+++++++...+..++||||++|++|.+++..    ...+++..+..++.|++.||.|||+.|++|
T Consensus        55 ~l~~~-----~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h  129 (267)
T cd08224          55 LLKQL-----DHPNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMH  129 (267)
T ss_pred             HHHhC-----CCCCeeeeeeeeecCCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEec
Confidence            99998     999999999999999999999999999999998864    345899999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC-CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCC
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF  244 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf  244 (521)
                      |||+|+||++   +.++.++|+|||++....... ......|++.|+|||.+.+..++.++|+||+||++|+|++|..||
T Consensus       130 ~dl~p~nil~---~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~  206 (267)
T cd08224         130 RDIKPANVFI---TATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPF  206 (267)
T ss_pred             CCcChhhEEE---CCCCcEEEeccceeeeccCCCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCc
Confidence            9999999999   677889999999987543322 223346889999999998888999999999999999999999999


Q ss_pred             CCCCc--HHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          245 IAQSN--RQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       245 ~~~~~--~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      .....  .+....+..+....  .....++..+.++|.+||..+|++|||+.++++
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~  260 (267)
T cd08224         207 YGDKMNLYSLCKKIEKCDYPP--LPADHYSEELRDLVSRCINPDPEKRPDISYVLQ  260 (267)
T ss_pred             ccCCccHHHHHhhhhcCCCCC--CChhhcCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            65432  23344444443322  122357889999999999999999999999885

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=3.5e-40  Score=327.76  Aligned_cols=259  Identities=27%  Similarity=0.428  Sum_probs=208.0

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      .+.++|.+.+.||+|+||.||+|+++.  +++.||||.+.+.....                          .....+.+
T Consensus        12 ~~~~~y~~~~~ig~g~~g~v~~~~~~~--~~~~vaiK~~~~~~~~~--------------------------~~~~~~~~   63 (342)
T cd07879          12 ELPERYTSLKQVGSGAYGSVCSAIDKR--TGEKVAIKKLSRPFQSE--------------------------IFAKRAYR   63 (342)
T ss_pred             ccccceEEEEEeeecCCeEEEEEEeCC--CCcEEEEEEecCccccc--------------------------cchhHHHH
Confidence            457899999999999999999999987  78899999986532111                          11234678


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeC------CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQ------NGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ  160 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~------~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~  160 (521)
                      |+.+++++     +||||+++++++...      ..+|+||||+.+ +|...+  ...+++..+..++.|++.||.|||+
T Consensus        64 e~~~l~~l-----~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~  135 (342)
T cd07879          64 ELTLLKHM-----QHENVIGLLDVFTSAVSGDEFQDFYLVMPYMQT-DLQKIM--GHPLSEDKVQYLVYQMLCGLKYIHS  135 (342)
T ss_pred             HHHHHHhc-----CCCCccchhheecccccCCCCceEEEEeccccc-CHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            99999998     999999999998754      346999999964 676554  3468999999999999999999999


Q ss_pred             CCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCccccccccccc-CCCCchhhhHHHHHHHHHHHh
Q 009980          161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQ-DRITSKSDMWSLGVILYILLS  239 (521)
Q Consensus       161 ~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~ll~  239 (521)
                      +|++||||||+||++   +.++.++|+|||+++....  ......|++.|+|||.+.+ ..++.++||||+||++|+|++
T Consensus       136 ~~i~H~dlkp~NIll---~~~~~~kL~dfg~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~  210 (342)
T cd07879         136 AGIIHRDLKPGNLAV---NEDCELKILDFGLARHADA--EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLT  210 (342)
T ss_pred             CCcccCCCCHHHEEE---CCCCCEEEeeCCCCcCCCC--CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHh
Confidence            999999999999999   7788999999999976432  2234467889999999875 468899999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHHcCCC-----------------------CCc----hhhhhccCHHHHHHHHHhccCCCCCCCC
Q 009980          240 GYPPFIAQSNRQKQQMIMAGEF-----------------------SFY----EQTWKNISSSAKQLISSLLTVDPNRRPS  292 (521)
Q Consensus       240 g~~pf~~~~~~~~~~~i~~~~~-----------------------~~~----~~~~~~~s~~~~~li~~~l~~dp~~R~t  292 (521)
                      |+.||.+.+.......+.....                       ..+    ...++.+++.+++||.+||+.||.+|||
T Consensus       211 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~  290 (342)
T cd07879         211 GKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLT  290 (342)
T ss_pred             CCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcC
Confidence            9999988765444443332110                       000    1112457888999999999999999999


Q ss_pred             HHHHHcCCcccCCC
Q 009980          293 AQELLNHPWVIGDS  306 (521)
Q Consensus       293 ~~~~l~h~~~~~~~  306 (521)
                      +.+++.||||....
T Consensus       291 ~~e~l~h~~f~~~~  304 (342)
T cd07879         291 ATEALEHPYFDSFR  304 (342)
T ss_pred             HHHHhcCcchhhcc
Confidence            99999999997643

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=100.00  E-value=4.2e-40  Score=351.89  Aligned_cols=150  Identities=28%  Similarity=0.432  Sum_probs=133.0

Q ss_pred             ccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEI   88 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   88 (521)
                      .++|++.+.||.|+||.||+|++..  +++.||||++++.....                         ......+..|+
T Consensus         3 ~~~y~i~~~LG~G~fg~Vy~a~~~~--~~~~vAiKvi~~~~~~~-------------------------~~~~~~~~~E~   55 (669)
T cd05610           3 IEEFVIVKPISRGAFGKVYLGRKKN--NSKLYAVKVVKKADMIN-------------------------KNMVHQVQAER   55 (669)
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECC--CCcEEEEEEEehhhccC-------------------------HHHHHHHHHHH
Confidence            4789999999999999999999987  78899999997532211                         01124577888


Q ss_pred             HHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 009980           89 LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDL  168 (521)
Q Consensus        89 ~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dl  168 (521)
                      .++..+     +||||+++++++.....+||||||+.|++|.+++...+.+++..++.|+.||+.||.|||++||+||||
T Consensus        56 ~~l~~l-----~hp~Iv~~~~~~~~~~~~~lVmEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDL  130 (669)
T cd05610          56 DALALS-----KSPFIVHLYYSLQSANNVYLVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDL  130 (669)
T ss_pred             HHHHhc-----CCCCcCeEEEEEEECCEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCc
Confidence            888887     999999999999999999999999999999999988888999999999999999999999999999999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCc
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSS  193 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~  193 (521)
                      ||+|||+   +.++.+||+|||+++
T Consensus       131 KP~NILl---~~~g~vkL~DFGls~  152 (669)
T cd05610         131 KPDNMLI---SNEGHIKLTDFGLSK  152 (669)
T ss_pred             cHHHEEE---cCCCCEEEEeCCCCc
Confidence            9999999   667889999999875

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=100.00  E-value=9.1e-40  Score=322.61  Aligned_cols=264  Identities=29%  Similarity=0.459  Sum_probs=210.8

Q ss_pred             ccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHH
Q 009980            5 TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALL   84 (521)
Q Consensus         5 ~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (521)
                      ...+.++|++.+.||.|+||.||+|.++.  +++.||||.+.+.....                          .....+
T Consensus         5 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~~--~~~~vaiK~~~~~~~~~--------------------------~~~~~~   56 (328)
T cd07856           5 VFEITNRYVDLQPVGMGAFGLVCSARDQL--TGQNVAIKKIMKPFSTP--------------------------VLAKRT   56 (328)
T ss_pred             eeccccceEEEEeecccCCeEEEEEEECC--CCCEEEEEEeccccccc--------------------------chhHHH
Confidence            34578999999999999999999999987  78899999986432111                          123447


Q ss_pred             HHHHHHHHHHhhccCCCCCccceeEEEEe-CCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 009980           85 TNEILVMRKIVENVSPHPNVIDLYDVYED-QNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANI  163 (521)
Q Consensus        85 ~~E~~~l~~l~~~~~~hpniv~~~~~~~~-~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i  163 (521)
                      .+|+.+++++     +||||+++++++.. ....|+||||+ +++|.+.+.. ..+++..+..++.|++.||.|||++||
T Consensus        57 ~~E~~~l~~l-----~hpniv~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~-~~~~~~~~~~~~~ql~~aL~~LH~~~i  129 (328)
T cd07856          57 YRELKLLKHL-----RHENIISLSDIFISPLEDIYFVTELL-GTDLHRLLTS-RPLEKQFIQYFLYQILRGLKYVHSAGV  129 (328)
T ss_pred             HHHHHHHHhc-----CCCCeeeEeeeEecCCCcEEEEeehh-ccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            7899999998     99999999999876 56789999999 5688776654 568899999999999999999999999


Q ss_pred             eeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCccccccccccc-CCCCchhhhHHHHHHHHHHHhCCC
Q 009980          164 VHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQ-DRITSKSDMWSLGVILYILLSGYP  242 (521)
Q Consensus       164 ~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~ll~g~~  242 (521)
                      +||||+|.||++   +.++.++|+|||.+.....  ......+++.|+|||.+.+ ..++.++|+||+|+++|+|++|++
T Consensus       130 iH~dl~p~Nili---~~~~~~~l~dfg~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~  204 (328)
T cd07856         130 VHRDLKPSNILI---NENCDLKICDFGLARIQDP--QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKP  204 (328)
T ss_pred             ccCCCCHHHEeE---CCCCCEEeCccccccccCC--CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCC
Confidence            999999999999   6788899999999875432  2234467889999998765 568999999999999999999999


Q ss_pred             CCCCCCcHHHHHHHHcC---------------------------CCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHH
Q 009980          243 PFIAQSNRQKQQMIMAG---------------------------EFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQE  295 (521)
Q Consensus       243 pf~~~~~~~~~~~i~~~---------------------------~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~  295 (521)
                      ||.+.........+...                           .........+.++..+.++|.+||+.+|++|||+++
T Consensus       205 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~e  284 (328)
T cd07856         205 LFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAE  284 (328)
T ss_pred             CCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHH
Confidence            99776543222111110                           000111122457889999999999999999999999


Q ss_pred             HHcCCcccCCCCc
Q 009980          296 LLNHPWVIGDSAK  308 (521)
Q Consensus       296 ~l~h~~~~~~~~~  308 (521)
                      ++.|||+.....+
T Consensus       285 ll~~~~~~~~~~~  297 (328)
T cd07856         285 ALAHPYLAPYHDP  297 (328)
T ss_pred             HhcCCccccccCC
Confidence            9999999755433

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=100.00  E-value=4.3e-40  Score=316.80  Aligned_cols=251  Identities=26%  Similarity=0.358  Sum_probs=205.6

Q ss_pred             eeecccccccCceEEEEeEEccCC-CcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHH
Q 009980           12 YEVTDILGRGGFSVVRRGIKKTCG-ETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILV   90 (521)
Q Consensus        12 Y~~~~~lG~G~~g~V~~a~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   90 (521)
                      |++++.||+|+||.||+|.....+ ++..||||.+.......                          .....+.+|+..
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~--------------------------~~~~~~~~e~~~   54 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTY--------------------------SEIEEFLSEAAC   54 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCH--------------------------HHHHHHHHHHHH
Confidence            678999999999999999886532 45789999986422110                          122457889999


Q ss_pred             HHHHhhccCCCCCccceeEEEEeCCe------EEEEEeccCCCchHHHHHhc------CCCCHHHHHHHHHHHHHHHHHH
Q 009980           91 MRKIVENVSPHPNVIDLYDVYEDQNG------VHLILELCSGGELFDRIVAQ------ERYMEVGAAAVIRQIAEGLAAL  158 (521)
Q Consensus        91 l~~l~~~~~~hpniv~~~~~~~~~~~------~~lv~e~~~gg~L~~~l~~~------~~~~~~~~~~i~~qil~al~~l  158 (521)
                      ++.+     +||||+++++++.....      .++||||+++|+|..++...      ..+++..+..++.|++.||.||
T Consensus        55 l~~l-----~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~l  129 (273)
T cd05035          55 MKDF-----DHPNVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYL  129 (273)
T ss_pred             HHhC-----CCCCeeeEEeeeccCCccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHH
Confidence            9988     99999999998865544      89999999999999887542      3589999999999999999999


Q ss_pred             HHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC---cccccCCcccccccccccCCCCchhhhHHHHHHHH
Q 009980          159 HQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY  235 (521)
Q Consensus       159 H~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~  235 (521)
                      |++|++||||||+||++   +.++.+||+|||+++.......   .....+++.|+|||.+.+..++.++||||+||++|
T Consensus       130 H~~~i~H~dlkp~Nil~---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~  206 (273)
T cd05035         130 SNRNFIHRDLAARNCML---REDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMW  206 (273)
T ss_pred             HhCCeeccccchheEEE---CCCCeEEECCccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHH
Confidence            99999999999999999   6778899999999976432221   11223567899999998888999999999999999


Q ss_pred             HHHh-CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          236 ILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       236 ~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      +|++ |.+||.+....+....+..+....   ....+++.+.+++.+||+.||.+|||+.+++++
T Consensus       207 el~~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~  268 (273)
T cd05035         207 EIATRGQTPYPGVENHEIYDYLRHGNRLK---QPEDCLDELYDLMYSCWRADPKDRPTFTKLREV  268 (273)
T ss_pred             HHHhCCCCCCCCCCHHHHHHHHHcCCCCC---CCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            9999 999998888777777776654322   224688999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=100.00  E-value=3.1e-40  Score=324.68  Aligned_cols=252  Identities=27%  Similarity=0.413  Sum_probs=204.8

Q ss_pred             ccceeecccccccCceEEEEeEEccCCC--cceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCGE--TNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~--~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      ..+|++.+.||+|+||.||+|++...+.  ...||+|.++....                           ......+.+
T Consensus         6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~---------------------------~~~~~~~~~   58 (316)
T cd05108           6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS---------------------------PKANKEILD   58 (316)
T ss_pred             hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCC---------------------------HHHHHHHHH
Confidence            4689999999999999999999865222  23489999853211                           012345778


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      |+.+++.+     +||||+++++++... ..++|+||+.+|+|.+++... ..+++..+..++.||+.||.|||++||+|
T Consensus        59 e~~~l~~l-----~h~niv~~~g~~~~~-~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH  132 (316)
T cd05108          59 EAYVMASV-----DNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVH  132 (316)
T ss_pred             HHHHHHhC-----CCCCCCeEEEEEcCC-CceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeec
Confidence            99999988     999999999998765 578999999999999999864 46889999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCc---ccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CC
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPV---VGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GY  241 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~  241 (521)
                      |||||+||++   +.++.+||+|||+++........   ....+++.|+|||.+.+..++.++|||||||++|+|++ |.
T Consensus       133 ~dlkp~Nill---~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~  209 (316)
T cd05108         133 RDLAARNVLV---KTPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS  209 (316)
T ss_pred             cccchhheEe---cCCCcEEEccccccccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCC
Confidence            9999999999   67788999999999865433221   12234678999999998899999999999999999998 99


Q ss_pred             CCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          242 PPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       242 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      .||.+....+....+..+. .++.  ...++..+.+++.+||..+|.+|||+.+++.+
T Consensus       210 ~p~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~  264 (316)
T cd05108         210 KPYDGIPASEISSILEKGE-RLPQ--PPICTIDVYMIMVKCWMIDADSRPKFRELIIE  264 (316)
T ss_pred             CCCCCCCHHHHHHHHhCCC-CCCC--CCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            9998877666554444332 2222  24578899999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=3.8e-40  Score=317.94  Aligned_cols=254  Identities=26%  Similarity=0.385  Sum_probs=210.5

Q ss_pred             ccccceeecccccccCceEEEEeEEccCC---CcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCG---ETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDAL   83 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (521)
                      ...++|++.+.||+|+||.||+|..+...   ++..||+|.+.....                           ......
T Consensus         3 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~---------------------------~~~~~~   55 (277)
T cd05032           3 LPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENAS---------------------------MRERIE   55 (277)
T ss_pred             cchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccC---------------------------HHHHHH
Confidence            34679999999999999999999987522   447899999753211                           112345


Q ss_pred             HHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC----------CCCHHHHHHHHHHHHH
Q 009980           84 LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE----------RYMEVGAAAVIRQIAE  153 (521)
Q Consensus        84 ~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~----------~~~~~~~~~i~~qil~  153 (521)
                      +.+|+.+++.+     +||||+++++++......|+||||+++|+|.+++....          .+++..+..++.|++.
T Consensus        56 ~~~e~~~l~~~-----~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  130 (277)
T cd05032          56 FLNEASVMKEF-----NCHHVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIAD  130 (277)
T ss_pred             HHHHHHHHHhC-----CCCceeEEEEEEcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHH
Confidence            77899999888     99999999999999999999999999999999986532          3677889999999999


Q ss_pred             HHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC---CcccccCCcccccccccccCCCCchhhhHHH
Q 009980          154 GLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD---PVVGLFGSIDYVSPEALLQDRITSKSDMWSL  230 (521)
Q Consensus       154 al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl  230 (521)
                      ||.|||++|++||||||+||++   +.++.+||+|||+++......   ......+++.|+|||.+.+..++.++|||||
T Consensus       131 ~l~~lH~~~i~H~di~p~nill---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl  207 (277)
T cd05032         131 GMAYLAAKKFVHRDLAARNCMV---AEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSF  207 (277)
T ss_pred             HHHHHHhCCccccccChheEEE---cCCCCEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHH
Confidence            9999999999999999999999   778899999999987543222   1223356788999999988889999999999


Q ss_pred             HHHHHHHHh-CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          231 GVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       231 G~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      ||++|++++ |.+||.+.+..+....+..+.....   ...++..+.+++.+||+.+|++|||+.+++.
T Consensus       208 G~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~  273 (277)
T cd05032         208 GVVLWEMATLAEQPYQGLSNEEVLKFVIDGGHLDL---PENCPDKLLELMRMCWQYNPKMRPTFLEIVS  273 (277)
T ss_pred             HHHHHHhhccCCCCCccCCHHHHHHHHhcCCCCCC---CCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            999999998 9999988887777777764432211   2446899999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=100.00  E-value=2.5e-39  Score=318.32  Aligned_cols=260  Identities=27%  Similarity=0.429  Sum_probs=215.1

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      .....|+..+.||+|+||.||+|++..  ++..||+|.+.......                         ......+.+
T Consensus        22 ~~~~~f~~~~~lg~G~~~~v~~~~~~~--~~~~valK~~~~~~~~~-------------------------~~~~~~~~~   74 (317)
T cd06635          22 DPEKLFTDLREIGHGSFGAVYFARDVR--TNEVVAIKKMSYSGKQS-------------------------NEKWQDIIK   74 (317)
T ss_pred             CchhhhhhhheeccCCCeEEEEEEEcC--CCcEEEEEEEecCCCCc-------------------------hHHHHHHHH
Confidence            345568889999999999999999987  77899999986532211                         012245778


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      |+.+++++     +|||++++++++.++...|+||||+.| +|.+.+.. ..++++..+..++.|++.||.|||++||+|
T Consensus        75 e~~~l~~l-----~h~~iv~~~~~~~~~~~~~lv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H  148 (317)
T cd06635          75 EVKFLQRI-----KHPNSIEYKGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIH  148 (317)
T ss_pred             HHHHHHhC-----CCCCEEEEEEEEeeCCeEEEEEeCCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence            99999998     999999999999999999999999976 77776654 566899999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccc---cCCCCchhhhHHHHHHHHHHHhCCC
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALL---QDRITSKSDMWSLGVILYILLSGYP  242 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~~ll~g~~  242 (521)
                      |||+|+||++   +.++.++|+|||++.....   .....|++.|+|||.+.   .+.++.++|+||+||++|+|++|.+
T Consensus       149 ~dL~p~Nil~---~~~~~~kl~dfg~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~  222 (317)
T cd06635         149 RDIKAGNILL---TEPGQVKLADFGSASIASP---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKP  222 (317)
T ss_pred             CCCCcccEEE---CCCCCEEEecCCCccccCC---cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCC
Confidence            9999999999   6678899999999875432   23346889999999974   4568899999999999999999999


Q ss_pred             CCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCCC
Q 009980          243 PFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSA  307 (521)
Q Consensus       243 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~~  307 (521)
                      ||...........+..+......  ...+++.+++++.+||..+|.+|||+.++++|||+.....
T Consensus       223 p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~  285 (317)
T cd06635         223 PLFNMNAMSALYHIAQNESPTLQ--SNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRERP  285 (317)
T ss_pred             CCCCccHHHHHHHHHhccCCCCC--CccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhccCc
Confidence            99887766666666555433221  2457889999999999999999999999999999975443

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=100.00  E-value=4.1e-40  Score=318.73  Aligned_cols=253  Identities=31%  Similarity=0.482  Sum_probs=207.6

Q ss_pred             eeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHH
Q 009980           12 YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVM   91 (521)
Q Consensus        12 Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l   91 (521)
                      |++.+.||+|++|+||+|+...  +++.||||.+......                           .......+|+..+
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~--~~~~~~ik~~~~~~~~---------------------------~~~~~~~~e~~~l   51 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKE--TGELVAIKKMKKKFYS---------------------------WEECMNLREVKSL   51 (283)
T ss_pred             CeeheeeccCCceEEEEEEECC--CCcEEEEEEehhhccc---------------------------hhHHHHHHHHHHH
Confidence            7889999999999999999987  6789999998642211                           1223355688888


Q ss_pred             HHHhhccCC-CCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 009980           92 RKIVENVSP-HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE--RYMEVGAAAVIRQIAEGLAALHQANIVHRDL  168 (521)
Q Consensus        92 ~~l~~~~~~-hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~al~~lH~~~i~H~dl  168 (521)
                      +++     . ||||+++++++.+++..|+||||+ +|+|.+.+....  .+++..+..++.|++.+|.|||++|++|+||
T Consensus        52 ~~~-----~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl  125 (283)
T cd07830          52 RKL-----NEHPNIVKLKEVFRENDELYFVFEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDL  125 (283)
T ss_pred             Hhc-----cCCCCchhHHHHhhcCCcEEEEEecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence            887     6 999999999999999999999999 779999887764  7899999999999999999999999999999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCccccccccccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQ-DRITSKSDMWSLGVILYILLSGYPPFIAQ  247 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~  247 (521)
                      +|+||++   +.++.++|+|||++.............|+..|+|||.+.+ ..++.++|+||+|+++|+|++|++||...
T Consensus       126 ~~~ni~i---~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~  202 (283)
T cd07830         126 KPENLLV---SGPEVVKIADFGLAREIRSRPPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGS  202 (283)
T ss_pred             ChhhEEE---cCCCCEEEeecccceeccCCCCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCC
Confidence            9999999   7788999999999986654444445568899999998854 45789999999999999999999999877


Q ss_pred             CcHHHHHHHHcCCCCC--------------------------chhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCc
Q 009980          248 SNRQKQQMIMAGEFSF--------------------------YEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPW  301 (521)
Q Consensus       248 ~~~~~~~~i~~~~~~~--------------------------~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~  301 (521)
                      +..+....+.......                          ........+..++++|.+||..+|.+|||+.+++.|||
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~  282 (283)
T cd07830         203 SEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPY  282 (283)
T ss_pred             ChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCC
Confidence            6655444332211100                          01112234688999999999999999999999999999


Q ss_pred             c
Q 009980          302 V  302 (521)
Q Consensus       302 ~  302 (521)
                      |
T Consensus       283 ~  283 (283)
T cd07830         283 F  283 (283)
T ss_pred             C
Confidence            7

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=100.00  E-value=1e-39  Score=320.37  Aligned_cols=259  Identities=26%  Similarity=0.417  Sum_probs=212.6

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      ...+.|...+.||+|+||.||+|++..  ++..||+|.+.......                         ......+.+
T Consensus        18 ~~~~~~~~~~~lg~g~~g~v~~~~~~~--~~~~v~ik~~~~~~~~~-------------------------~~~~~~~~~   70 (313)
T cd06633          18 DPEEIFVGLHEIGHGSFGAVYFATNSH--TNEVVAVKKMSYSGKQT-------------------------NEKWQDIIK   70 (313)
T ss_pred             CHHHHhhcceeeccCCCeEEEEEEECC--CCcEEEEEEEeccccCc-------------------------hHHHHHHHH
Confidence            345567778899999999999999887  78899999986532211                         011234778


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      |+.+++.+     +|||++++++++.+....|+||||+.| +|.+.+.. ...+++.++..++.||+.||.|||++|++|
T Consensus        71 E~~~l~~l-----~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H  144 (313)
T cd06633          71 EVKFLQQL-----KHPNTIEYKGCYLKEHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIH  144 (313)
T ss_pred             HHHHHHhC-----CCCCCccEEEEEEeCCEEEEEEecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence            99999998     999999999999999999999999965 77777754 456899999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccc---cCCCCchhhhHHHHHHHHHHHhCCC
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALL---QDRITSKSDMWSLGVILYILLSGYP  242 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~~ll~g~~  242 (521)
                      +||+|+||++   +.++.++|+|||++.....   .....|++.|+|||.+.   ...++.++||||+||++|+|++|.+
T Consensus       145 ~dl~p~nili---~~~~~~kL~dfg~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~  218 (313)
T cd06633         145 RDIKAGNILL---TEPGQVKLADFGSASKSSP---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKP  218 (313)
T ss_pred             CCCChhhEEE---CCCCCEEEeecCCCcccCC---CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCC
Confidence            9999999999   6778899999999865332   23456899999999984   3568889999999999999999999


Q ss_pred             CCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCC
Q 009980          243 PFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDS  306 (521)
Q Consensus       243 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~  306 (521)
                      ||...+.......+.....+.  .....++..+++|+.+||+.+|.+|||+.+++.||||....
T Consensus       219 p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~~~  280 (313)
T cd06633         219 PLFNMNAMSALYHIAQNDSPT--LQSNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRRDR  280 (313)
T ss_pred             CCCCCChHHHHHHHHhcCCCC--CCccccCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCc
Confidence            998877655555554443221  12245678899999999999999999999999999998643

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=100.00  E-value=5.2e-40  Score=319.35  Aligned_cols=251  Identities=24%  Similarity=0.360  Sum_probs=209.7

Q ss_pred             ccceeecccccccCceEEEEeEEccC---CCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTC---GETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      ..+|.+.+.||+|+||.||+|.+...   .++..+|+|.+.....                            .....+.
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~----------------------------~~~~~~~   55 (291)
T cd05094           4 RRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTL----------------------------AARKDFQ   55 (291)
T ss_pred             hHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccH----------------------------HHHHHHH
Confidence            35799999999999999999986431   2456689998743211                            1234578


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC----------------CCCHHHHHHHHH
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE----------------RYMEVGAAAVIR  149 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~----------------~~~~~~~~~i~~  149 (521)
                      +|+.+++++     +||||+++++++...+..++||||++|++|.+++...+                .+++..+..++.
T Consensus        56 ~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  130 (291)
T cd05094          56 REAELLTNL-----QHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIAS  130 (291)
T ss_pred             HHHHHHhcC-----CCCCcceEEEEEccCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHH
Confidence            899999998     99999999999999999999999999999999997543                378999999999


Q ss_pred             HHHHHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC---CcccccCCcccccccccccCCCCchhh
Q 009980          150 QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD---PVVGLFGSIDYVSPEALLQDRITSKSD  226 (521)
Q Consensus       150 qil~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~D  226 (521)
                      ||+.||.|||++||+||||||+||++   +.++.++|+|||++.......   ......|++.|+|||.+.+..++.++|
T Consensus       131 ~i~~al~~lH~~~i~H~dlkp~Nil~---~~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  207 (291)
T cd05094         131 QIASGMVYLASQHFVHRDLATRNCLV---GANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESD  207 (291)
T ss_pred             HHHHHHHHHHhCCeeecccCcceEEE---ccCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhh
Confidence            99999999999999999999999999   677899999999997543322   122345678899999999888999999


Q ss_pred             hHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          227 MWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       227 iwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      |||+||++|+|++ |.+||...+..+....+..+.....   ...+|..+.+++.+||..+|.+|||+.++++
T Consensus       208 i~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~  277 (291)
T cd05094         208 VWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLER---PRVCPKEVYDIMLGCWQREPQQRLNIKEIYK  277 (291)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhCCCCCCC---CccCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence            9999999999999 9999988887777777666554322   2457889999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=100.00  E-value=4.6e-40  Score=320.58  Aligned_cols=255  Identities=24%  Similarity=0.314  Sum_probs=208.3

Q ss_pred             ccceeecccccccCceEEEEeEEccCC--------------CcceEEEEEeecCCCCCCCCCCCCCCCCCCCcccccccc
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCG--------------ETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTR   74 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~--------------~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (521)
                      .++|++.+.||+|+||.||+|.+...+              .+..||+|.+......                       
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~-----------------------   60 (296)
T cd05051           4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASD-----------------------   60 (296)
T ss_pred             hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCH-----------------------
Confidence            468999999999999999999876522              2356899987642211                       


Q ss_pred             ccccccHHHHHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC-----------CCCHHH
Q 009980           75 KQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE-----------RYMEVG  143 (521)
Q Consensus        75 ~~~~~~~~~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-----------~~~~~~  143 (521)
                          .....+.+|+.+++++     +||||+++++++..++..++||||+.+++|.+++....           .+++..
T Consensus        61 ----~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~  131 (296)
T cd05051          61 ----NAREDFLKEVKILSRL-----SDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFST  131 (296)
T ss_pred             ----HHHHHHHHHHHHHHhc-----CCCCEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHH
Confidence                1234578899999998     99999999999999999999999999999999997765           689999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC---CcccccCCcccccccccccCC
Q 009980          144 AAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD---PVVGLFGSIDYVSPEALLQDR  220 (521)
Q Consensus       144 ~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~  220 (521)
                      +..++.|++.||.|||++|++||||||+||++   +..+.++|+|||+++......   ......+++.|+|||.+.+..
T Consensus       132 ~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  208 (296)
T cd05051         132 LLYMATQIASGMRYLESLNFVHRDLATRNCLV---GKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGK  208 (296)
T ss_pred             HHHHHHHHHHHHHHHHHcCccccccchhceee---cCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCC
Confidence            99999999999999999999999999999999   667899999999987543222   122334677899999998888


Q ss_pred             CCchhhhHHHHHHHHHHHh--CCCCCCCCCcHHHHHHHHcC----CCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHH
Q 009980          221 ITSKSDMWSLGVILYILLS--GYPPFIAQSNRQKQQMIMAG----EFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQ  294 (521)
Q Consensus       221 ~~~~~DiwslG~il~~ll~--g~~pf~~~~~~~~~~~i~~~----~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~  294 (521)
                      ++.++||||+||++|+|++  |..||...+.......+...    ...........+|.++.+++.+||+.||.+|||+.
T Consensus       209 ~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~  288 (296)
T cd05051         209 FTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFR  288 (296)
T ss_pred             CCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHH
Confidence            9999999999999999998  78899877766665555432    11111112245788999999999999999999999


Q ss_pred             HHHc
Q 009980          295 ELLN  298 (521)
Q Consensus       295 ~~l~  298 (521)
                      ++++
T Consensus       289 el~~  292 (296)
T cd05051         289 EIHL  292 (296)
T ss_pred             HHHH
Confidence            9975

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=100.00  E-value=8.9e-40  Score=312.66  Aligned_cols=247  Identities=29%  Similarity=0.398  Sum_probs=205.1

Q ss_pred             cccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      ..++|++.+.||+|+||.||+|.+..  + ..||+|++.....                             ....+.+|
T Consensus         4 ~~~~~~~~~~lg~g~~~~v~~~~~~~--~-~~valK~~~~~~~-----------------------------~~~~~~~E   51 (262)
T cd05071           4 PRESLRLEVKLGQGCFGEVWMGTWNG--T-TRVAIKTLKPGTM-----------------------------SPEAFLQE   51 (262)
T ss_pred             ChHHeeEeeecCCCCCCcEEEEEecC--C-ceEEEEecccCcc-----------------------------CHHHHHHH
Confidence            34789999999999999999998865  3 4599999864211                             13457889


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ--ERYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      +.+++++     +||||+++++.+. ....|+||||+.+|+|.+++...  ..+++..+..++.|++.||.|||++|++|
T Consensus        52 ~~~l~~l-----~~~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H  125 (262)
T cd05071          52 AQVMKKL-----RHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH  125 (262)
T ss_pred             HHHHHhC-----CCCCcceEEEEEC-CCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence            9999998     9999999999875 45689999999999999999753  35789999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCc--ccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CCC
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPV--VGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYP  242 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~  242 (521)
                      |||||+||++   +.++.++|+|||.++........  ....++..|+|||...+..++.++||||+|+++|+|++ |.+
T Consensus       126 ~dl~p~Nill---~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~  202 (262)
T cd05071         126 RDLRAANILV---GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV  202 (262)
T ss_pred             cccCcccEEE---cCCCcEEeccCCceeeccccccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCC
Confidence            9999999999   66788999999999754332211  22346678999999988889999999999999999999 899


Q ss_pred             CCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          243 PFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       243 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      ||.+....+....+..+....   ....++..+.+++.+|++.+|.+|||+.+++.
T Consensus       203 p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~  255 (262)
T cd05071         203 PYPGMVNREVLDQVERGYRMP---CPPECPESLHDLMCQCWRKEPEERPTFEYLQA  255 (262)
T ss_pred             CCCCCChHHHHHHHhcCCCCC---CccccCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence            998887777766665543211   12457899999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=1.6e-41  Score=333.35  Aligned_cols=259  Identities=25%  Similarity=0.409  Sum_probs=217.3

Q ss_pred             cce-eecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHH
Q 009980           10 DEY-EVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEI   88 (521)
Q Consensus        10 ~~Y-~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   88 (521)
                      ++| +...+||+|+|-+||+|.+..  +|..||--.++......                        .......+..|+
T Consensus        39 gRy~k~~evLGrGafKtVYka~De~--~giEVAWnqvk~~d~~q------------------------~~~~leR~~~Ev   92 (632)
T KOG0584|consen   39 GRYLKFDEVLGRGAFKTVYKAFDEE--EGIEVAWNQVKIRDVTQ------------------------SPEELERLYSEV   92 (632)
T ss_pred             Cceeehhhhcccccceeeeeccccc--cchhhHHHHHhHHHhhc------------------------ChHHHHHHHHHH
Confidence            344 345789999999999999988  78777754443222211                        112236689999


Q ss_pred             HHHHHHhhccCCCCCccceeEEEEeCCe--EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--Ce
Q 009980           89 LVMRKIVENVSPHPNVIDLYDVYEDQNG--VHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQAN--IV  164 (521)
Q Consensus        89 ~~l~~l~~~~~~hpniv~~~~~~~~~~~--~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~--i~  164 (521)
                      ++|+.|     .||||+++|++|.+...  +-+|+|++.+|+|..++.+.++.+...++.|++||+.||.|||++.  |+
T Consensus        93 ~lLKsL-----~H~NIirfy~SW~d~~n~~in~iTEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPII  167 (632)
T KOG0584|consen   93 HLLKSL-----KHPNIIRFYDSWVDTDNKTINFITELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPII  167 (632)
T ss_pred             HHHccC-----CCCceeeeeeheecCCCceeeeeeecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCcc
Confidence            999999     99999999999988765  8899999999999999999999999999999999999999999994  99


Q ss_pred             eccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCC
Q 009980          165 HRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF  244 (521)
Q Consensus       165 H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf  244 (521)
                      |||||-+|||+  ....|.|||+|+|+|+....+ .....+|||.|||||+.. ..|+..+||||||+++.||+|+..||
T Consensus       168 HRDLKCDNIFi--nG~~G~VKIGDLGLAtl~r~s-~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPY  243 (632)
T KOG0584|consen  168 HRDLKCDNIFV--NGNLGEVKIGDLGLATLLRKS-HAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPY  243 (632)
T ss_pred             ccccccceEEE--cCCcCceeecchhHHHHhhcc-ccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCCh
Confidence            99999999999  356689999999999876543 334478999999999997 78999999999999999999999999


Q ss_pred             CCC-CcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCC
Q 009980          245 IAQ-SNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDS  306 (521)
Q Consensus       245 ~~~-~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~  306 (521)
                      ... +..++++++..|..+-.-.  +--.+++++||.+||.. .+.|||+.++|.||||..+.
T Consensus       244 sEC~n~AQIYKKV~SGiKP~sl~--kV~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d~  303 (632)
T KOG0584|consen  244 SECTNPAQIYKKVTSGIKPAALS--KVKDPEVREFIEKCLAT-KSERLSAKELLKDPFFDEDG  303 (632)
T ss_pred             hhhCCHHHHHHHHHcCCCHHHhh--ccCCHHHHHHHHHHhcC-chhccCHHHHhhChhhcccc
Confidence            664 5667888888887543322  22378999999999999 99999999999999998753

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=100.00  E-value=6.2e-40  Score=315.59  Aligned_cols=251  Identities=25%  Similarity=0.341  Sum_probs=203.2

Q ss_pred             eeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHH
Q 009980           12 YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVM   91 (521)
Q Consensus        12 Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l   91 (521)
                      |.+++.||+|+||.||+|.....+....||+|.++.....                          ......+.+|+.++
T Consensus         1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~--------------------------~~~~~~~~~E~~~l   54 (272)
T cd05075           1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICT--------------------------RSEMEDFLSEAVCM   54 (272)
T ss_pred             CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCC--------------------------HHHHHHHHHHHHHH
Confidence            4578999999999999999876433346999998643211                          11234577899999


Q ss_pred             HHHhhccCCCCCccceeEEEEeC------CeEEEEEeccCCCchHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHH
Q 009980           92 RKIVENVSPHPNVIDLYDVYEDQ------NGVHLILELCSGGELFDRIVA------QERYMEVGAAAVIRQIAEGLAALH  159 (521)
Q Consensus        92 ~~l~~~~~~hpniv~~~~~~~~~------~~~~lv~e~~~gg~L~~~l~~------~~~~~~~~~~~i~~qil~al~~lH  159 (521)
                      +.+     +||||+++++++...      ...++||||+.+|+|.+++..      ...+++..+..++.||+.||.|||
T Consensus        55 ~~l-----~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH  129 (272)
T cd05075          55 KEF-----DHPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLS  129 (272)
T ss_pred             HhC-----CCCCcceEEEEEccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHH
Confidence            988     999999999976422      357899999999999888742      234789999999999999999999


Q ss_pred             HCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC---cccccCCcccccccccccCCCCchhhhHHHHHHHHH
Q 009980          160 QANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYI  236 (521)
Q Consensus       160 ~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~  236 (521)
                      ++||+||||||+||++   +.++.++|+|||+++.......   .....+++.|+|||.+.+..++.++||||+|+++|+
T Consensus       130 ~~~i~H~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~e  206 (272)
T cd05075         130 SKSFIHRDLAARNCML---NENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWE  206 (272)
T ss_pred             HCCeeccccchhheEE---cCCCCEEECCCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHH
Confidence            9999999999999999   7788899999999986543221   112245678999999998889999999999999999


Q ss_pred             HHh-CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          237 LLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       237 ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      |++ |.+||.+....+....+..+.....   ...++..++++|.+||..||++|||+.+++++
T Consensus       207 l~~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~  267 (272)
T cd05075         207 IATRGQTPYPGVENSEIYDYLRQGNRLKQ---PPDCLDGLYSLMSSCWLLNPKDRPSFETLRCE  267 (272)
T ss_pred             HHcCCCCCCCCCCHHHHHHHHHcCCCCCC---CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            999 8999988877777777776543221   24578899999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=100.00  E-value=9.4e-40  Score=319.00  Aligned_cols=256  Identities=21%  Similarity=0.356  Sum_probs=207.7

Q ss_pred             ccccceeecccccccCceEEEEeEEcc---CCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKT---CGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDAL   83 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~---~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (521)
                      -..++|.+.+.||+|+||.||+|.+..   ..++..||||+++.....                           .....
T Consensus        32 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~---------------------------~~~~~   84 (302)
T cd05055          32 FPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHS---------------------------SEREA   84 (302)
T ss_pred             ccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCCh---------------------------HHHHH
Confidence            345689999999999999999998632   125568999998642210                           12345


Q ss_pred             HHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC
Q 009980           84 LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE--RYMEVGAAAVIRQIAEGLAALHQA  161 (521)
Q Consensus        84 ~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~al~~lH~~  161 (521)
                      +.+|+.+++++    .+||||+++++++...+..|+||||+.+|+|.+++....  .+++.++..++.|++.||.|||++
T Consensus        85 ~~~E~~~l~~l----~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~  160 (302)
T cd05055          85 LMSELKIMSHL----GNHENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASK  160 (302)
T ss_pred             HHHHHHHHHhc----cCCCCcceEEEEEecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            78899999887    369999999999999999999999999999999987543  389999999999999999999999


Q ss_pred             CCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC---cccccCCcccccccccccCCCCchhhhHHHHHHHHHHH
Q 009980          162 NIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILL  238 (521)
Q Consensus       162 ~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll  238 (521)
                      ||+|+||||+||++   +.++.++|+|||++........   .....+++.|+|||.+.+..++.++||||+||++|+|+
T Consensus       161 ~ivH~dlkp~Nil~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~  237 (302)
T cd05055         161 NCIHRDLAARNVLL---THGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIF  237 (302)
T ss_pred             CeehhhhccceEEE---cCCCeEEECCCcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHH
Confidence            99999999999999   6778899999999975432221   11234677899999998888999999999999999999


Q ss_pred             h-CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          239 S-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       239 ~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      + |.+||......+.............  .....++.+.+++.+||..+|++|||+.+++.
T Consensus       238 t~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~  296 (302)
T cd05055         238 SLGSNPYPGMPVDSKFYKLIKEGYRMA--QPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQ  296 (302)
T ss_pred             hCCCCCcCCCCchHHHHHHHHcCCcCC--CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence            8 9999987766555444443332222  22457899999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=100.00  E-value=7.2e-40  Score=324.34  Aligned_cols=260  Identities=30%  Similarity=0.424  Sum_probs=205.7

Q ss_pred             ceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHH
Q 009980           11 EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILV   90 (521)
Q Consensus        11 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   90 (521)
                      +|++.+.||+|+||.||+|++.....+..||||.+.......                          .....+.+|+.+
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~--------------------------~~~~~~~~E~~~   54 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKK--------------------------ILAKRALRELKL   54 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccc--------------------------hhHHHHHHHHHH
Confidence            589999999999999999999873227889999985421110                          113346779988


Q ss_pred             HHHHhhccCCCCCccceeEEEEe----CCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 009980           91 MRKIVENVSPHPNVIDLYDVYED----QNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHR  166 (521)
Q Consensus        91 l~~l~~~~~~hpniv~~~~~~~~----~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~  166 (521)
                      ++++    .+||||+++++....    ...+|++|+|+. ++|.+.+.....+++..++.++.||+.||.|||++||+||
T Consensus        55 l~~l----~~h~~iv~~~~~~~~~~~~~~~~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~  129 (332)
T cd07857          55 LRHF----RGHKNITCLYDMDIVFPGNFNELYLYEELME-ADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHR  129 (332)
T ss_pred             HHHh----cCCCChheeeeeeeeccccCCcEEEEEeccc-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence            8887    369999999987533    256889999985 5899999888889999999999999999999999999999


Q ss_pred             cCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC-----CcccccCCccccccccccc-CCCCchhhhHHHHHHHHHHHhC
Q 009980          167 DLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD-----PVVGLFGSIDYVSPEALLQ-DRITSKSDMWSLGVILYILLSG  240 (521)
Q Consensus       167 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~ll~g  240 (521)
                      ||||+||++   +.++.++|+|||++.......     ......||+.|+|||.+.+ ..++.++|+||+||++|+|++|
T Consensus       130 dlkp~Nili---~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g  206 (332)
T cd07857         130 DLKPGNLLV---NADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGR  206 (332)
T ss_pred             CCCHHHeEE---cCCCCEEeCcCCCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhC
Confidence            999999999   777889999999997543211     1223468999999998765 4689999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHHcCCC---------------------------CCchhhhhccCHHHHHHHHHhccCCCCCCCCH
Q 009980          241 YPPFIAQSNRQKQQMIMAGEF---------------------------SFYEQTWKNISSSAKQLISSLLTVDPNRRPSA  293 (521)
Q Consensus       241 ~~pf~~~~~~~~~~~i~~~~~---------------------------~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~  293 (521)
                      .+||.+.+.......+.....                           ......+..++..+.+|+.+||..||.+|||+
T Consensus       207 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~  286 (332)
T cd07857         207 KPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISV  286 (332)
T ss_pred             CcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCH
Confidence            999987664433332222110                           00112234568899999999999999999999


Q ss_pred             HHHHcCCcccC
Q 009980          294 QELLNHPWVIG  304 (521)
Q Consensus       294 ~~~l~h~~~~~  304 (521)
                      .+++.|||+..
T Consensus       287 ~~ll~~~~~~~  297 (332)
T cd07857         287 EEALEHPYLAI  297 (332)
T ss_pred             HHHhcChhhhh
Confidence            99999999963

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=100.00  E-value=3.3e-40  Score=319.45  Aligned_cols=252  Identities=25%  Similarity=0.395  Sum_probs=209.7

Q ss_pred             cceeecccccccCceEEEEeEEccC---CCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTC---GETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      .+|++.+.||.|+||.||+|.+..+   ..++.||||++.....                           ......+..
T Consensus         5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~---------------------------~~~~~~~~~   57 (283)
T cd05091           5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAE---------------------------GPLREEFKH   57 (283)
T ss_pred             HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCC---------------------------HHHHHHHHH
Confidence            4688999999999999999987542   1357899999863211                           011244778


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc----------------CCCCHHHHHHHHHH
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ----------------ERYMEVGAAAVIRQ  150 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~----------------~~~~~~~~~~i~~q  150 (521)
                      |+.++..+     +||||+++++++...+..++++||+.+++|.+++...                ..+++..+..++.|
T Consensus        58 e~~~~~~l-----~h~~iv~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q  132 (283)
T cd05091          58 EAMMRSRL-----QHPNIVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQ  132 (283)
T ss_pred             HHHHHhcC-----CCCCcCeEEEEEcCCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHH
Confidence            88888888     9999999999999999999999999999999988532                34788889999999


Q ss_pred             HHHHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC---cccccCCcccccccccccCCCCchhhh
Q 009980          151 IAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALLQDRITSKSDM  227 (521)
Q Consensus       151 il~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di  227 (521)
                      ++.||.|||++||+||||||+||++   ..++.+||+|||+++.......   .....+++.|+|||.+.++.++.++||
T Consensus       133 l~~aL~~lH~~gi~H~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv  209 (283)
T cd05091         133 IAAGMEFLSSHHVVHKDLATRNVLV---FDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDI  209 (283)
T ss_pred             HHHHHHHHHHcCccccccchhheEe---cCCCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhH
Confidence            9999999999999999999999999   6677899999999875432221   123346788999999988889999999


Q ss_pred             HHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          228 WSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       228 wslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      ||+||++|+|++ |.+||.+....+....+..+.....   ...++..+.+++.+||+.+|.+|||+.+++..
T Consensus       210 ~slG~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~  279 (283)
T cd05091         210 WSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRNRQVLPC---PDDCPAWVYTLMLECWNEFPSRRPRFKDIHSR  279 (283)
T ss_pred             HHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCC---CCCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence            999999999998 8999988888888888777664332   25689999999999999999999999999873

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=100.00  E-value=2.7e-40  Score=320.91  Aligned_cols=261  Identities=29%  Similarity=0.479  Sum_probs=210.2

Q ss_pred             ceeecccccccCceEEEEeEEccC-CCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           11 EYEVTDILGRGGFSVVRRGIKKTC-GETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        11 ~Y~~~~~lG~G~~g~V~~a~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      +|++.+.||+|+||.||+|++... .++..||||++.+......                        ......+.+|+.
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~------------------------~~~~~~~~~E~~   56 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQK------------------------AKTAEHTRTERQ   56 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhh------------------------hhHHHHHHHHHH
Confidence            489999999999999999986532 2567899999875322110                        112334678888


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCC
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLK  169 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlk  169 (521)
                      ++.++    .+||||+++++.+..+...|+||||+.|++|.+.+.....+++..+..++.|++.||.|||+.|++||||+
T Consensus        57 ~l~~~----~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~  132 (288)
T cd05583          57 VLEAV----RRCPFLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIK  132 (288)
T ss_pred             HHHhc----cCCcchhhhheeeecCCEEEEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCC
Confidence            88887    46999999999999999999999999999999999887889999999999999999999999999999999


Q ss_pred             CCcEEEeeCCCCCCEEEeecCCCccCCCCCC--cccccCCcccccccccccCC--CCchhhhHHHHHHHHHHHhCCCCCC
Q 009980          170 PENCLFLNDREDSPLKIMDFGLSSVEGYTDP--VVGLFGSIDYVSPEALLQDR--ITSKSDMWSLGVILYILLSGYPPFI  245 (521)
Q Consensus       170 p~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~--~~~~~DiwslG~il~~ll~g~~pf~  245 (521)
                      |.||++   +.++.++|+|||++........  .....|++.|+|||.+.+..  ++.++|+||+|+++|+|++|..||.
T Consensus       133 p~nil~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~  209 (288)
T cd05583         133 LENILL---DSEGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFT  209 (288)
T ss_pred             HHHeEE---CCCCCEEEEECccccccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcc
Confidence            999999   6778899999999876433221  12346899999999987654  6889999999999999999999996


Q ss_pred             CCCc----HHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCC---HHHHHcCCcccCCC
Q 009980          246 AQSN----RQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPS---AQELLNHPWVIGDS  306 (521)
Q Consensus       246 ~~~~----~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t---~~~~l~h~~~~~~~  306 (521)
                      ....    .+....+.......    ...++..+++++.+||+.||++|||   +.++|+||||+...
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~~  273 (288)
T cd05583         210 VDGEQNSQSEISRRILKSKPPF----PKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGID  273 (288)
T ss_pred             cCcccchHHHHHHHHHccCCCC----CcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccCC
Confidence            4332    23333333333322    2457899999999999999999998   57789999997643

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=100.00  E-value=4.5e-40  Score=318.21  Aligned_cols=254  Identities=29%  Similarity=0.451  Sum_probs=209.9

Q ss_pred             eeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHH
Q 009980           12 YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVM   91 (521)
Q Consensus        12 Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l   91 (521)
                      |++.+.||+|++|.||+|++..  +++.||+|++.......                          .....+.+|+.++
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~--~~~~~~iK~~~~~~~~~--------------------------~~~~~~~~e~~~l   52 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKK--TGEIVALKKIRLDNEEE--------------------------GIPSTALREISLL   52 (282)
T ss_pred             CeeehcccccCcceEEEeeecC--CCcEEEEEEeccccccc--------------------------cccHHHHHHHHHH
Confidence            6788999999999999999987  78899999987543111                          1123467899999


Q ss_pred             HHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCC
Q 009980           92 RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKP  170 (521)
Q Consensus        92 ~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp  170 (521)
                      +++     +||||+++++++.+.+..|+||||+.+ +|.+++... ..+++..+..++.|++.||.|||++||+||||+|
T Consensus        53 ~~~-----~~~~i~~~~~~~~~~~~~~~v~e~~~~-~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~  126 (282)
T cd07829          53 KEL-----KHPNIVKLLDVIHTERKLYLVFEYCDM-DLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKP  126 (282)
T ss_pred             Hhc-----CCCCHHHHHhhhhcCCceEEEecCcCc-CHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCh
Confidence            998     899999999999999999999999975 899999876 5799999999999999999999999999999999


Q ss_pred             CcEEEeeCCCCCCEEEeecCCCccCCCCC-CcccccCCcccccccccccC-CCCchhhhHHHHHHHHHHHhCCCCCCCCC
Q 009980          171 ENCLFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALLQD-RITSKSDMWSLGVILYILLSGYPPFIAQS  248 (521)
Q Consensus       171 ~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~  248 (521)
                      +||++   +.++.++|+|||.+....... ......+++.|+|||.+.+. .++.++|+||+||++|++++|.+||.+.+
T Consensus       127 ~ni~~---~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~  203 (282)
T cd07829         127 QNILI---NRDGVLKLADFGLARAFGIPLRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDS  203 (282)
T ss_pred             heEEE---cCCCCEEEecCCcccccCCCccccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCcc
Confidence            99999   678899999999987654332 22334567889999998766 78899999999999999999999998877


Q ss_pred             cHHHHHHHHcCCCCC-------------------------chhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcc
Q 009980          249 NRQKQQMIMAGEFSF-------------------------YEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV  302 (521)
Q Consensus       249 ~~~~~~~i~~~~~~~-------------------------~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~  302 (521)
                      .......+.......                         ....++.++..+.++|.+||..||++||++.++++||||
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~  282 (282)
T cd07829         204 EIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF  282 (282)
T ss_pred             HHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence            655544433211100                         011223467899999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=100.00  E-value=7.9e-40  Score=316.19  Aligned_cols=251  Identities=23%  Similarity=0.352  Sum_probs=208.2

Q ss_pred             ccceeecccccccCceEEEEeEEcc---CCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKT---CGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~---~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      ..+|.+.+.||+|+||.||+|....   .+++..+|+|.+.....                            .....+.
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~----------------------------~~~~~~~   55 (280)
T cd05092           4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASE----------------------------SARQDFQ   55 (280)
T ss_pred             hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCH----------------------------HHHHHHH
Confidence            3578899999999999999997532   22566899998753211                            1234588


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC---------------CCCHHHHHHHHHH
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE---------------RYMEVGAAAVIRQ  150 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~---------------~~~~~~~~~i~~q  150 (521)
                      +|+.+++++     .||||+++++++...+..+++|||+.+++|.+++...+               .+++..+..++.|
T Consensus        56 ~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~q  130 (280)
T cd05092          56 REAELLTVL-----QHQHIVRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQ  130 (280)
T ss_pred             HHHHHHhcC-----CCCCCceEEEEEecCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHH
Confidence            899999998     99999999999999999999999999999999987643               4788999999999


Q ss_pred             HHHHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC---cccccCCcccccccccccCCCCchhhh
Q 009980          151 IAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALLQDRITSKSDM  227 (521)
Q Consensus       151 il~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di  227 (521)
                      |+.||.|||++|++||||||+||++   +.++.+||+|||++........   .....+++.|+|||.+.+..++.++||
T Consensus       131 i~~al~~LH~~~i~H~dlkp~nil~---~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di  207 (280)
T cd05092         131 IASGMVYLASLHFVHRDLATRNCLV---GQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDI  207 (280)
T ss_pred             HHHHHHHHHHCCeecccccHhhEEE---cCCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhH
Confidence            9999999999999999999999999   6678899999999875432211   122335778999999998899999999


Q ss_pred             HHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          228 WSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       228 wslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      |||||++|+|++ |.+||......+....+..+....   ....+|+.+.+++.+||+.||.+||++.+++.
T Consensus       208 ~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~  276 (280)
T cd05092         208 WSFGVVLWEIFTYGKQPWYQLSNTEAIECITQGRELE---RPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS  276 (280)
T ss_pred             HHHHHHHHHHHcCCCCCCccCCHHHHHHHHHcCccCC---CCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            999999999998 999998877777776666554322   12458899999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=100.00  E-value=9.2e-40  Score=312.24  Aligned_cols=249  Identities=28%  Similarity=0.388  Sum_probs=208.2

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      +...++|++.+.||+|+||.||+|..+   +++.||+|.+.....                             ....+.
T Consensus         2 ~~~~~~~~~~~~ig~G~~g~v~~~~~~---~~~~~a~K~~~~~~~-----------------------------~~~~~~   49 (260)
T cd05067           2 EVPRETLKLVKKLGAGQFGEVWMGYYN---GHTKVAIKSLKQGSM-----------------------------SPEAFL   49 (260)
T ss_pred             ccchHHceeeeeeccCccceEEeeecC---CCceEEEEEecCCCC-----------------------------cHHHHH
Confidence            346789999999999999999999876   467899999864221                             134578


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ--ERYMEVGAAAVIRQIAEGLAALHQANI  163 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~al~~lH~~~i  163 (521)
                      +|+.+++++     +||||+++++++. .+..|++|||+.+++|.+++...  ..+++..+..++.|++.||.|||+.|+
T Consensus        50 ~E~~~l~~l-----~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i  123 (260)
T cd05067          50 AEANLMKQL-----QHPRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNY  123 (260)
T ss_pred             HHHHHHHhc-----CCcCeeeEEEEEc-cCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCe
Confidence            899999998     9999999999874 55789999999999999988653  468899999999999999999999999


Q ss_pred             eeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC--cccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-C
Q 009980          164 VHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP--VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-G  240 (521)
Q Consensus       164 ~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g  240 (521)
                      +||||||+||++   +.++.++|+|||++........  .....++..|+|||.+....++.++||||+|+++|++++ |
T Consensus       124 ~H~dl~p~ni~i---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g  200 (260)
T cd05067         124 IHRDLRAANILV---SETLCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYG  200 (260)
T ss_pred             ecccccHHhEEE---cCCCCEEEccCcceeecCCCCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCC
Confidence            999999999999   6778899999999876442211  122345678999999988889999999999999999999 9


Q ss_pred             CCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          241 YPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       241 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      ++||.+.+..+....+..+...   +....++.++.+++.+||..+|++|||+++++.
T Consensus       201 ~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  255 (260)
T cd05067         201 RIPYPGMTNPEVIQNLERGYRM---PRPDNCPEELYELMRLCWKEKPEERPTFEYLRS  255 (260)
T ss_pred             CCCCCCCChHHHHHHHHcCCCC---CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            9999988877777666554322   223557889999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=100.00  E-value=1e-39  Score=319.69  Aligned_cols=257  Identities=25%  Similarity=0.364  Sum_probs=208.2

Q ss_pred             cccccceeecccccccCceEEEEeEEccCC-----CcceEEEEEeecCCCCCCCCCCCCCCCCCCCcccccccccccccc
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCG-----ETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVS   80 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (521)
                      +...++|.+.+.||+|+||.||+|++....     ....+|+|.+......                           ..
T Consensus        14 ~~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~---------------------------~~   66 (307)
T cd05098          14 EVPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATE---------------------------KD   66 (307)
T ss_pred             eeehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCCh---------------------------HH
Confidence            344589999999999999999999875311     2356999998642110                           11


Q ss_pred             HHHHHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC----------------CCCHHHH
Q 009980           81 DALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE----------------RYMEVGA  144 (521)
Q Consensus        81 ~~~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~----------------~~~~~~~  144 (521)
                      ...+.+|+.+++++    .+||||+++++++...+..|+||||+.+|+|.+++....                .++..++
T Consensus        67 ~~~~~~e~~~l~~l----~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~  142 (307)
T cd05098          67 LSDLISEMEMMKMI----GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDL  142 (307)
T ss_pred             HHHHHHHHHHHHHh----cCCCCEeeEEEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHH
Confidence            23477788888877    479999999999999999999999999999999997642                4788899


Q ss_pred             HHHHHHHHHHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC---cccccCCcccccccccccCCC
Q 009980          145 AAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALLQDRI  221 (521)
Q Consensus       145 ~~i~~qil~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~  221 (521)
                      ..++.|++.||.|||++|++||||||+||++   +.++.++|+|||.++.......   .....+++.|+|||.+.+..+
T Consensus       143 ~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill---~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  219 (307)
T cd05098         143 VSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIY  219 (307)
T ss_pred             HHHHHHHHHHHHHHHHCCcccccccHHheEE---cCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCC
Confidence            9999999999999999999999999999999   6778899999999875432211   111234568999999988889


Q ss_pred             CchhhhHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          222 TSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       222 ~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      +.++|+||+||++|+|++ |.+||.+.+..+....+..+...   ..+..++.++++++.+||..+|.+|||+.+++++
T Consensus       220 ~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~  295 (307)
T cd05098         220 THQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRM---DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED  295 (307)
T ss_pred             CcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHcCCCC---CCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence            999999999999999998 89999887776666666554321   1234678999999999999999999999999873

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=100.00  E-value=1e-39  Score=315.27  Aligned_cols=251  Identities=28%  Similarity=0.411  Sum_probs=204.8

Q ss_pred             ccceeecccccccCceEEEEeEEccCCCc--ceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCGET--NQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~--~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      .++|++.+.||+|+||+||+|.+..++..  ..||+|++.....                           ......+.+
T Consensus         6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~---------------------------~~~~~~~~~   58 (279)
T cd05109           6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTS---------------------------PKANKEILD   58 (279)
T ss_pred             hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCC---------------------------HHHHHHHHH
Confidence            56899999999999999999998763221  2589999853211                           112345778


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      |+.++..+     .||||+++++++... ..+++|||+++|+|.+.+... +.+++..+..++.|++.||.|||++||+|
T Consensus        59 e~~~l~~~-----~~~~i~~~~~~~~~~-~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH  132 (279)
T cd05109          59 EAYVMAGV-----GSPYVCRLLGICLTS-TVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVH  132 (279)
T ss_pred             HHHHHHhc-----CCCCCceEEEEEcCC-CcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence            88888888     999999999998754 578999999999999998764 56899999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCc---ccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CC
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPV---VGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GY  241 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~  241 (521)
                      |||||+||++   ..++.+||+|||+++........   ....+++.|+|||.+.+..++.++|||||||++|+|++ |.
T Consensus       133 ~dlkp~Nil~---~~~~~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~  209 (279)
T cd05109         133 RDLAARNVLV---KSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGA  209 (279)
T ss_pred             cccccceEEE---cCCCcEEECCCCceeecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCC
Confidence            9999999999   66778999999999765422211   12234678999999988889999999999999999998 99


Q ss_pred             CCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          242 PPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       242 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      +||...........+..+.....   +..++.++.+++.+||..||++|||+.+++.
T Consensus       210 ~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~  263 (279)
T cd05109         210 KPYDGIPAREIPDLLEKGERLPQ---PPICTIDVYMIMVKCWMIDSECRPRFRELVD  263 (279)
T ss_pred             CCCCCCCHHHHHHHHHCCCcCCC---CccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            99987776666665555433222   2457899999999999999999999999985

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=100.00  E-value=4.9e-40  Score=314.28  Aligned_cols=250  Identities=26%  Similarity=0.395  Sum_probs=211.4

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      .-..+|++.+.||.|+||.||+|.++.   +..+|+|++.....                            .....+.+
T Consensus         3 ~~~~~y~~~~~ig~g~~~~vy~~~~~~---~~~~~~k~~~~~~~----------------------------~~~~~~~~   51 (261)
T cd05148           3 RPREEFTLERKLGSGYFGEVWEGLWKN---RVRVAIKILKSDDL----------------------------LKQQDFQK   51 (261)
T ss_pred             CcHHHHHHhhhhccCCCccEEEeEecC---CCcEEEEeccccch----------------------------hhHHHHHH
Confidence            345789999999999999999999874   67899999864322                            12345788


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ--ERYMEVGAAAVIRQIAEGLAALHQANIV  164 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~al~~lH~~~i~  164 (521)
                      |+.+++.+     +||||+++++++...+.+++||||+++++|.+++...  ..+++..+..++.||+.||.|||++|++
T Consensus        52 e~~~l~~l-----~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~  126 (261)
T cd05148          52 EVQALKRL-----RHKHLISLFAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSI  126 (261)
T ss_pred             HHHHHhcC-----CCcchhheeeeEecCCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence            99999998     9999999999999999999999999999999999753  4689999999999999999999999999


Q ss_pred             eccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC-cccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CCC
Q 009980          165 HRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP-VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYP  242 (521)
Q Consensus       165 H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~  242 (521)
                      |+||+|+||++   +.++.+||+|||.+........ .....+++.|+|||.+.+..++.++||||||+++|+|++ |..
T Consensus       127 h~dl~~~nilv---~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~  203 (261)
T cd05148         127 HRDLAARNILV---GEDLVCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQV  203 (261)
T ss_pred             ccccCcceEEE---cCCceEEEccccchhhcCCccccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCC
Confidence            99999999999   6778899999999976432211 122345678999999988889999999999999999998 899


Q ss_pred             CCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          243 PFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       243 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      ||...+..+....+..+.. .+  ....+++.+.+++.+||..||.+|||+.++++
T Consensus       204 p~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~  256 (261)
T cd05148         204 PYPGMNNHEVYDQITAGYR-MP--CPAKCPQEIYKIMLECWAAEPEDRPSFKALRE  256 (261)
T ss_pred             CCCcCCHHHHHHHHHhCCc-CC--CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence            9988887777777765422 11  22568899999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=100.00  E-value=1.1e-39  Score=313.39  Aligned_cols=246  Identities=26%  Similarity=0.357  Sum_probs=199.8

Q ss_pred             ccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHHh
Q 009980           16 DILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIV   95 (521)
Q Consensus        16 ~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~   95 (521)
                      +.||+|+||.||+|+.+.++....+|+|.+......                           .....+.+|+.++.++ 
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~---------------------------~~~~~~~~E~~~l~~l-   52 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASK---------------------------DDHRDFAGELEVLCKL-   52 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCH---------------------------HHHHHHHHHHHHHHhh-
Confidence            469999999999999987433346788887532110                           1224577899988887 


Q ss_pred             hccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHH
Q 009980           96 ENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE----------------RYMEVGAAAVIRQIAEGLAALH  159 (521)
Q Consensus        96 ~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~----------------~~~~~~~~~i~~qil~al~~lH  159 (521)
                         .+||||+++++++...+.+|+||||+++|+|.+++....                .+++..+..++.|++.||.|||
T Consensus        53 ---~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH  129 (270)
T cd05047          53 ---GHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS  129 (270)
T ss_pred             ---ccCCCeeeEEEEEecCCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHH
Confidence               479999999999999999999999999999999987543                4788999999999999999999


Q ss_pred             HCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh
Q 009980          160 QANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS  239 (521)
Q Consensus       160 ~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~  239 (521)
                      ++|++||||||+||++   +.++.+||+|||++..............++.|+|||.+....++.++|+|||||++|+|++
T Consensus       130 ~~~i~H~dikp~nili---~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~  206 (270)
T cd05047         130 QKQFIHRDLAARNILV---GENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS  206 (270)
T ss_pred             HCCEeecccccceEEE---cCCCeEEECCCCCccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHc
Confidence            9999999999999999   7788899999999864322111112234567999999988889999999999999999997


Q ss_pred             -CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          240 -GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       240 -g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                       |..||.+.+..+....+..+...   .....++.++.+++.+||..||.+|||+.+++.
T Consensus       207 ~g~~pf~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  263 (270)
T cd05047         207 LGGTPYCGMTCAELYEKLPQGYRL---EKPLNCDDEVYDLMRQCWREKPYERPSFAQILV  263 (270)
T ss_pred             CCCCCccccCHHHHHHHHhCCCCC---CCCCcCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence             99999887777766666554221   122457889999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=100.00  E-value=5.9e-40  Score=313.58  Aligned_cols=255  Identities=28%  Similarity=0.420  Sum_probs=209.3

Q ss_pred             ceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHH
Q 009980           11 EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILV   90 (521)
Q Consensus        11 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   90 (521)
                      +|.+.+.||+|+||.||+|.+..  .+..+++|+++.......                       ..........|+.+
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~--~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~e~~~   55 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKK--AVAEERLKVLKEIPVGEL-----------------------NPNETVQANQEAQL   55 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecC--CCCcceEEEecccccccc-----------------------CcchHHHHHHHHHH
Confidence            69999999999999999999886  556677777654322110                       00112335678888


Q ss_pred             HHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 009980           91 MRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA----QERYMEVGAAAVIRQIAEGLAALHQANIVHR  166 (521)
Q Consensus        91 l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qil~al~~lH~~~i~H~  166 (521)
                      ++++     +||||+++++++.+....++||||+++++|.+++..    ...+++..+..++.|++.||.|||++|++|+
T Consensus        56 l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~  130 (260)
T cd08222          56 LSKL-----DHPAIVKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHR  130 (260)
T ss_pred             HHhC-----CCCcHHHHHHHHhcCCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCcccc
Confidence            8888     999999999999999999999999999999888753    3568999999999999999999999999999


Q ss_pred             cCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC-CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCC
Q 009980          167 DLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFI  245 (521)
Q Consensus       167 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~  245 (521)
                      ||+|+||++   + .+.++|+|||++....... ......|++.|+|||.+.+..++.++|+||+|+++|+|++|..||.
T Consensus       131 ~l~~~nili---~-~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~  206 (260)
T cd08222         131 DLKAKNIFL---K-NNLLKIGDFGVSRLLMGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFE  206 (260)
T ss_pred             CCChhheEe---e-cCCEeecccCceeecCCCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence            999999999   3 3569999999987643222 2233458889999999988888999999999999999999999998


Q ss_pred             CCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcc
Q 009980          246 AQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV  302 (521)
Q Consensus       246 ~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~  302 (521)
                      +.........+..+..+..   ...++.++.++|.+||..+|++||++.++++||||
T Consensus       207 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~  260 (260)
T cd08222         207 GQNFLSVVLRIVEGPTPSL---PETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI  260 (260)
T ss_pred             CccHHHHHHHHHcCCCCCC---cchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence            7776666666655443322   24578999999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=100.00  E-value=7.1e-40  Score=325.16  Aligned_cols=263  Identities=29%  Similarity=0.473  Sum_probs=210.0

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      ..+.++|++.+.||+|+||.||+|.+..  +++.||||.+.+.....                          .....+.
T Consensus         3 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~--~~~~~~vK~~~~~~~~~--------------------------~~~~~~~   54 (337)
T cd07852           3 KHILRKYEILQKLGKGAYGIVWKAIDRR--TKEVVALKKIFDAFRNA--------------------------TDAQRTF   54 (337)
T ss_pred             chhhhHHHHhHhhcCCCCeeEEEEEEcC--CCeEEEEEeeccccCcc--------------------------hhhhhhh
Confidence            4678899999999999999999999987  77899999885421110                          1123356


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeC--CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQ--NGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANI  163 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~--~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i  163 (521)
                      +|+.+++++    .+||||+++++++...  ...|+||||+.+ +|.+++... .+++..+..++.||+.||.|||++||
T Consensus        55 ~E~~~l~~l----~~h~ni~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~i  128 (337)
T cd07852          55 REIMFLQEL----GDHPNIVKLLNVIKAENDKDIYLVFEYMET-DLHAVIRAN-ILEDVHKRYIMYQLLKALKYIHSGNV  128 (337)
T ss_pred             HHHHHHHHh----cCCCCccceeeeeccCCCceEEEEeccccc-CHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            788888877    4899999999998654  468999999975 998888765 78999999999999999999999999


Q ss_pred             eeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC------CcccccCCccccccccccc-CCCCchhhhHHHHHHHHH
Q 009980          164 VHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD------PVVGLFGSIDYVSPEALLQ-DRITSKSDMWSLGVILYI  236 (521)
Q Consensus       164 ~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~  236 (521)
                      +||||||+||++   +.++.+||+|||++.......      ......||+.|+|||.+.+ ..++.++|+||+|+++|+
T Consensus       129 ~H~dl~p~nill---~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~e  205 (337)
T cd07852         129 IHRDLKPSNILL---NSDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGE  205 (337)
T ss_pred             ecCCCCHHHEEE---cCCCcEEEeeccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHH
Confidence            999999999999   778899999999987543221      1223468999999998764 457889999999999999


Q ss_pred             HHhCCCCCCCCCcHHHHHHHHcCC---------------------------CCCchhhhhccCHHHHHHHHHhccCCCCC
Q 009980          237 LLSGYPPFIAQSNRQKQQMIMAGE---------------------------FSFYEQTWKNISSSAKQLISSLLTVDPNR  289 (521)
Q Consensus       237 ll~g~~pf~~~~~~~~~~~i~~~~---------------------------~~~~~~~~~~~s~~~~~li~~~l~~dp~~  289 (521)
                      |++|++||.+.........+....                           ........+.++.++.++|.+||+.||++
T Consensus       206 l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~  285 (337)
T cd07852         206 MLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNK  285 (337)
T ss_pred             HHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCccc
Confidence            999999998766554433322211                           11111223447899999999999999999


Q ss_pred             CCCHHHHHcCCcccCC
Q 009980          290 RPSAQELLNHPWVIGD  305 (521)
Q Consensus       290 R~t~~~~l~h~~~~~~  305 (521)
                      |||+.++++|||+..-
T Consensus       286 Rps~~~il~~~~~~~~  301 (337)
T cd07852         286 RLTAEEALEHPYVAQF  301 (337)
T ss_pred             ccCHHHHhhChhhhhh
Confidence            9999999999999754

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=100.00  E-value=1.4e-39  Score=311.06  Aligned_cols=248  Identities=28%  Similarity=0.411  Sum_probs=206.0

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      ...++|++.+.||+|+||.||+|...   .+..||+|.+.....                             ....+.+
T Consensus         3 ~~~~~~~~~~~ig~g~~~~v~~~~~~---~~~~~~~k~~~~~~~-----------------------------~~~~~~~   50 (260)
T cd05070           3 IPRESLQLIKKLGNGQFGEVWMGTWN---GNTKVAVKTLKPGTM-----------------------------SPESFLE   50 (260)
T ss_pred             CchHHhhhhheeccccCceEEEEEec---CCceeEEEEecCCCC-----------------------------CHHHHHH
Confidence            45679999999999999999999876   356799999864221                             1245789


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ--ERYMEVGAAAVIRQIAEGLAALHQANIV  164 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~al~~lH~~~i~  164 (521)
                      |+.+++++     +||||+++++++. ....|++|||+.+++|.+++...  ..+++..+..++.|++.||.|||++|++
T Consensus        51 E~~~l~~l-----~~~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~  124 (260)
T cd05070          51 EAQIMKKL-----RHDKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYI  124 (260)
T ss_pred             HHHHHHhc-----CCCceEEEEeEEC-CCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence            99999998     9999999999875 45689999999999999998753  3589999999999999999999999999


Q ss_pred             eccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC--cccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CC
Q 009980          165 HRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP--VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GY  241 (521)
Q Consensus       165 H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~  241 (521)
                      ||||||+||++   +.++.++|+|||++........  .....++..|+|||.+.+..++.++|+||||+++|+|++ |.
T Consensus       125 H~di~p~Nili---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~  201 (260)
T cd05070         125 HRDLRSANILV---GDGLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGR  201 (260)
T ss_pred             cCCCccceEEE---eCCceEEeCCceeeeeccCcccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCC
Confidence            99999999999   6678899999999976433221  112235667999999988889999999999999999999 99


Q ss_pred             CCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          242 PPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       242 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      +||.+.+..+....+..+.. .  +.....+..+.+|+.+||..+|++|||+.+++.
T Consensus       202 ~p~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~  255 (260)
T cd05070         202 VPYPGMNNREVLEQVERGYR-M--PCPQDCPISLHELMLQCWKKDPEERPTFEYLQS  255 (260)
T ss_pred             CCCCCCCHHHHHHHHHcCCC-C--CCCCcCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence            99988877777776655422 1  122467899999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=2e-39  Score=310.14  Aligned_cols=249  Identities=29%  Similarity=0.408  Sum_probs=209.8

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      ...++|++.+.||+|+||.||+|....   ++.||||.+....                             .....+.+
T Consensus         3 ~~~~~~~i~~~ig~g~~~~v~~~~~~~---~~~~~vK~~~~~~-----------------------------~~~~~~~~   50 (261)
T cd05034           3 IPRESLKLERKLGAGQFGEVWMGTWNG---TTKVAVKTLKPGT-----------------------------MSPEAFLQ   50 (261)
T ss_pred             cchhheeeeeeeccCcceEEEEEEEcC---CceEEEEEecCCc-----------------------------cCHHHHHH
Confidence            456899999999999999999999763   4679999986321                             12345888


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE--RYMEVGAAAVIRQIAEGLAALHQANIV  164 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~al~~lH~~~i~  164 (521)
                      |+.+++++     +||||+++++++......++||||+++++|.+++....  .++...+..++.|++.|+.|||++|++
T Consensus        51 e~~~l~~l-----~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~  125 (261)
T cd05034          51 EAQIMKKL-----RHDKLVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYI  125 (261)
T ss_pred             HHHHHhhC-----CCCCEeeeeeeeecCCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence            99999998     99999999999999899999999999999999997643  689999999999999999999999999


Q ss_pred             eccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC--cccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CC
Q 009980          165 HRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP--VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GY  241 (521)
Q Consensus       165 H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~  241 (521)
                      |+||||+||++   +.++.++|+|||++........  .....++..|+|||.+.+..++.++|+||+|+++|+|++ |+
T Consensus       126 h~di~p~nili---~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~  202 (261)
T cd05034         126 HRDLAARNILV---GENLVCKIADFGLARLIEDDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGR  202 (261)
T ss_pred             cCCcchheEEE---cCCCCEEECccccceeccchhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCC
Confidence            99999999999   7778999999999876542211  112234567999999998889999999999999999998 99


Q ss_pred             CCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          242 PPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       242 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      +||.+.+.......+..+....   .....+..+.+++.+||..+|.+|||+.++++
T Consensus       203 ~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~  256 (261)
T cd05034         203 VPYPGMTNREVLEQVERGYRMP---RPPNCPEELYDLMLQCWDKDPEERPTFEYLQS  256 (261)
T ss_pred             CCCCCCCHHHHHHHHHcCCCCC---CCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence            9998887777777766543211   12446889999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=100.00  E-value=1.3e-39  Score=312.50  Aligned_cols=252  Identities=27%  Similarity=0.391  Sum_probs=208.5

Q ss_pred             ccceeecccccccCceEEEEeEEccCC-CcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCG-ETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      ..+|++.+.||+|+||.||+|.++.++ .+..+|+|.++....                           ......+.+|
T Consensus         3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~---------------------------~~~~~~~~~e   55 (267)
T cd05066           3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYT---------------------------EKQRRDFLSE   55 (267)
T ss_pred             HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCC---------------------------HHHHHHHHHH
Confidence            368999999999999999999986532 344799998753211                           1123457889


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQANIVHR  166 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~~~i~H~  166 (521)
                      +.+++++     +||||+++++++..++..|+||||++|++|.+++... +.++..++..++.|++.||.|||++|++||
T Consensus        56 ~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~  130 (267)
T cd05066          56 ASIMGQF-----DHPNIIHLEGVVTKSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHR  130 (267)
T ss_pred             HHHHHhC-----CCCCcceEEEEEecCCccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeh
Confidence            9999998     9999999999999999999999999999999998764 468999999999999999999999999999


Q ss_pred             cCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCc----ccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CC
Q 009980          167 DLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPV----VGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GY  241 (521)
Q Consensus       167 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~  241 (521)
                      ||||+||++   +.++.++|+|||++.........    ....+++.|+|||.+.+..++.++|+||+|+++|++++ |.
T Consensus       131 dlkp~nili---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~  207 (267)
T cd05066         131 DLAARNILV---NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGE  207 (267)
T ss_pred             hhchhcEEE---CCCCeEEeCCCCcccccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCC
Confidence            999999999   67788999999999765432211    11123567999999998889999999999999999886 99


Q ss_pred             CCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          242 PPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       242 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      .||...+..+....+..+.. .+  ....+++.+.+++.+||+.+|.+|||+.++++
T Consensus       208 ~p~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  261 (267)
T cd05066         208 RPYWEMSNQDVIKAIEEGYR-LP--APMDCPAALHQLMLDCWQKDRNERPKFEQIVS  261 (267)
T ss_pred             CCcccCCHHHHHHHHhCCCc-CC--CCCCCCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence            99988777777666665532 22  22457899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=5.6e-41  Score=327.31  Aligned_cols=261  Identities=26%  Similarity=0.421  Sum_probs=221.0

Q ss_pred             ccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEI   88 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   88 (521)
                      ..-|..++.||-|+||.|++|+..+  +...||+|.++|......                         -..+.++.|-
T Consensus       628 KSmFvkik~iGvGAFGeV~Lv~KvD--T~~lYAmKTLrKaDVl~r-------------------------nQvaHVKAER  680 (1034)
T KOG0608|consen  628 KSMFVKIKTIGVGAFGEVCLVRKVD--TRALYAMKTLRKADVLMR-------------------------NQVAHVKAER  680 (1034)
T ss_pred             ccceEEEeeecccccceeEEEeecc--hhhHHHHhhhHHHHHHhh-------------------------hhhhhhhhhh
Confidence            3467788999999999999999887  788999999987543221                         1223466788


Q ss_pred             HHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 009980           89 LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDL  168 (521)
Q Consensus        89 ~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dl  168 (521)
                      .||..-     +.+-||+||..|++.+.+|+||+|++||++..+|.+.+-|+|..++.++..+..|+.+.|..|++||||
T Consensus       681 DILAEA-----Dn~WVVrLyySFQDkdnLYFVMdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDi  755 (1034)
T KOG0608|consen  681 DILAEA-----DNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDI  755 (1034)
T ss_pred             hhHhhc-----CCcceEEEEEEeccCCceEEEEeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceeccc
Confidence            888776     999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCccCC---------CCC----------------------------------Cccccc
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSSVEG---------YTD----------------------------------PVVGLF  205 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~---------~~~----------------------------------~~~~~~  205 (521)
                      ||+|||+   +.+|.+||+|||+|+-..         ..+                                  ...+.+
T Consensus       756 KPDNILI---DrdGHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslv  832 (1034)
T KOG0608|consen  756 KPDNILI---DRDGHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLV  832 (1034)
T ss_pred             CccceEE---ccCCceeeeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhc
Confidence            9999999   899999999999985311         000                                  011356


Q ss_pred             CCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccC
Q 009980          206 GSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTV  285 (521)
Q Consensus       206 gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~  285 (521)
                      ||+.|+|||++....|+..||+||.|||||+|+.|++||.+.+..+....+....-.+......++|+++.++|.++. -
T Consensus       833 gt~nyiapevl~r~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc-~  911 (1034)
T KOG0608|consen  833 GTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLC-C  911 (1034)
T ss_pred             CCCcccChHHhcccCccccchhhHhhHHHHHHhhCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHh-c
Confidence            999999999999999999999999999999999999999999888877776665544444455789999999999876 4


Q ss_pred             CCCCCC---CHHHHHcCCcccCC
Q 009980          286 DPNRRP---SAQELLNHPWVIGD  305 (521)
Q Consensus       286 dp~~R~---t~~~~l~h~~~~~~  305 (521)
                      +++.|.   .++++..||||++.
T Consensus       912 sad~RLGkng~d~vKaHpfFkgI  934 (1034)
T KOG0608|consen  912 SADSRLGKNGADQVKAHPFFKGI  934 (1034)
T ss_pred             ChhhhhcccchhhhhcCcccccc
Confidence            678885   47789999999864

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=2e-39  Score=309.31  Aligned_cols=244  Identities=27%  Similarity=0.390  Sum_probs=202.7

Q ss_pred             ccccccCceEEEEeEEccCC-CcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHH
Q 009980           16 DILGRGGFSVVRRGIKKTCG-ETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKI   94 (521)
Q Consensus        16 ~~lG~G~~g~V~~a~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l   94 (521)
                      +.||+|+||.||+|...... ++..||+|.+......                           .....+.+|+.+++.+
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~---------------------------~~~~~~~~e~~~l~~l   53 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA---------------------------AGKKEFLREASVMAQL   53 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccch---------------------------HHHHHHHHHHHHHHhc
Confidence            47999999999999876532 3478999998643211                           1234578899999998


Q ss_pred             hhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q 009980           95 VENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCL  174 (521)
Q Consensus        95 ~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil  174 (521)
                           +||||+++++++. .+.+++||||+.+++|.+++...+.+++..+..++.|++.||.|||++|++|+||||+||+
T Consensus        54 -----~h~~iv~~~~~~~-~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nil  127 (257)
T cd05060          54 -----DHPCIVRLIGVCK-GEPLMLVMELAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVL  127 (257)
T ss_pred             -----CCCCeeeEEEEEc-CCceEEEEEeCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEE
Confidence                 9999999999876 4568999999999999999998888999999999999999999999999999999999999


Q ss_pred             EeeCCCCCCEEEeecCCCccCCCCCCc----ccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCCc
Q 009980          175 FLNDREDSPLKIMDFGLSSVEGYTDPV----VGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSN  249 (521)
Q Consensus       175 ~~~~~~~~~~kl~Dfg~a~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~  249 (521)
                      +   +.++.+||+|||+++........    ....++..|+|||.+.+..++.++||||||+++|++++ |.+||...+.
T Consensus       128 i---~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~  204 (257)
T cd05060         128 L---VNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG  204 (257)
T ss_pred             E---cCCCcEEeccccccceeecCCcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH
Confidence            9   77888999999999765332221    11123467999999988889999999999999999998 9999988877


Q ss_pred             HHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          250 RQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       250 ~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      .+....+......   .....++..+++++.+||..+|.+|||+.++++
T Consensus       205 ~~~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~  250 (257)
T cd05060         205 AEVIAMLESGERL---PRPEECPQEIYSIMLSCWKYRPEDRPTFSELES  250 (257)
T ss_pred             HHHHHHHHcCCcC---CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            7776666555322   222457899999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=100.00  E-value=1.9e-39  Score=309.37  Aligned_cols=243  Identities=24%  Similarity=0.386  Sum_probs=200.2

Q ss_pred             cccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHHhh
Q 009980           17 ILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVE   96 (521)
Q Consensus        17 ~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~   96 (521)
                      .||+|+||.||+|..+..+.+..||+|++.....                           ......+.+|+.+++++  
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~---------------------------~~~~~~~~~E~~~l~~l--   52 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENE---------------------------KSVRDEMMREAEIMHQL--   52 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccC---------------------------hHHHHHHHHHHHHHHhc--
Confidence            4899999999999876433566799999854211                           11234588999999998  


Q ss_pred             ccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q 009980           97 NVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLF  175 (521)
Q Consensus        97 ~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~  175 (521)
                         +||||++++++++ ....++||||++|++|.+++.. ...+++..+..++.|++.||.|||++|++||||||+||++
T Consensus        53 ---~h~~ii~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~  128 (257)
T cd05115          53 ---DNPYIVRMIGVCE-AEALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLL  128 (257)
T ss_pred             ---CCCCeEEEEEEEc-CCCeEEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEE
Confidence               9999999999886 4578999999999999998874 4578999999999999999999999999999999999999


Q ss_pred             eeCCCCCCEEEeecCCCccCCCCCC----cccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCCcH
Q 009980          176 LNDREDSPLKIMDFGLSSVEGYTDP----VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNR  250 (521)
Q Consensus       176 ~~~~~~~~~kl~Dfg~a~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~  250 (521)
                         +.++.+||+|||++........    .....+++.|+|||.+.+..++.++|||||||++|++++ |.+||......
T Consensus       129 ---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~  205 (257)
T cd05115         129 ---VNQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP  205 (257)
T ss_pred             ---cCCCcEEeccCCccccccCCccceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH
Confidence               6778899999999975432221    111223578999999988889999999999999999996 99999888877


Q ss_pred             HHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          251 QKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       251 ~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      +....+..+....   ....+++++.+++.+||..+|++||++.++.+
T Consensus       206 ~~~~~~~~~~~~~---~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~  250 (257)
T cd05115         206 EVMSFIEQGKRLD---CPAECPPEMYALMKDCWIYKWEDRPNFAKVEE  250 (257)
T ss_pred             HHHHHHHCCCCCC---CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            7777666654322   22457899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=100.00  E-value=2.1e-39  Score=318.48  Aligned_cols=256  Identities=26%  Similarity=0.373  Sum_probs=208.0

Q ss_pred             cccccceeecccccccCceEEEEeEEcc-----CCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCcccccccccccccc
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKT-----CGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVS   80 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~-----~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (521)
                      ..-.++|.+.+.||+|+||.||+|++..     ......||+|++......                           ..
T Consensus         8 ~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~---------------------------~~   60 (314)
T cd05099           8 EFPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATD---------------------------KD   60 (314)
T ss_pred             cccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCCh---------------------------HH
Confidence            3456799999999999999999998642     113457999997642110                           12


Q ss_pred             HHHHHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc----------------CCCCHHHH
Q 009980           81 DALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ----------------ERYMEVGA  144 (521)
Q Consensus        81 ~~~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~----------------~~~~~~~~  144 (521)
                      ...+.+|+.+++++    .+||||+++++++...+.+|+||||+.+|+|.+++...                ..++...+
T Consensus        61 ~~~~~~E~~~l~~l----~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~  136 (314)
T cd05099          61 LADLISEMELMKLI----GKHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDL  136 (314)
T ss_pred             HHHHHHHHHHHHhc----cCCCCeeeEEEEEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHH
Confidence            23477888888877    35999999999999999999999999999999999753                24788899


Q ss_pred             HHHHHHHHHHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC---cccccCCcccccccccccCCC
Q 009980          145 AAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALLQDRI  221 (521)
Q Consensus       145 ~~i~~qil~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~  221 (521)
                      ..++.||+.||.|||++|++||||||+||++   +.++.+||+|||+++.......   .....+++.|+|||.+.+..+
T Consensus       137 ~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  213 (314)
T cd05099         137 VSCAYQVARGMEYLESRRCIHRDLAARNVLV---TEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVY  213 (314)
T ss_pred             HHHHHHHHHHHHHHHHCCeeeccccceeEEE---cCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCc
Confidence            9999999999999999999999999999999   6678899999999976432211   111234567999999988889


Q ss_pred             CchhhhHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          222 TSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       222 ~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      +.++||||+||++|+|++ |..||.+.+..+....+..+...   .....++.++++++.+||..+|.+|||+.++++
T Consensus       214 ~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~  288 (314)
T cd05099         214 THQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLLREGHRM---DKPSNCTHELYMLMRECWHAVPTQRPTFKQLVE  288 (314)
T ss_pred             CccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC---CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            999999999999999999 89999888777777766655321   122467889999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=100.00  E-value=2.3e-39  Score=316.79  Aligned_cols=257  Identities=24%  Similarity=0.348  Sum_probs=210.4

Q ss_pred             ccccccceeecccccccCceEEEEeEEcc-----CCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccc
Q 009980            5 TRKLTDEYEVTDILGRGGFSVVRRGIKKT-----CGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSV   79 (521)
Q Consensus         5 ~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~-----~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (521)
                      .....++|++.+.||+|+||.||+|++..     ...+..||+|.+.....                           ..
T Consensus        10 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~---------------------------~~   62 (304)
T cd05101          10 WEFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDAT---------------------------EK   62 (304)
T ss_pred             ccccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccc---------------------------hH
Confidence            34557899999999999999999997532     12345799999753211                           01


Q ss_pred             cHHHHHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC----------------CCCHHH
Q 009980           80 SDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE----------------RYMEVG  143 (521)
Q Consensus        80 ~~~~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~----------------~~~~~~  143 (521)
                      ....+.+|+.+++.+    .+||||+++++++......|+||||+.+|+|.+++....                .++...
T Consensus        63 ~~~~~~~E~~~l~~l----~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  138 (304)
T cd05101          63 DLSDLVSEMEMMKMI----GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKD  138 (304)
T ss_pred             HHHHHHHHHHHHHhh----ccCCCchheeEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHH
Confidence            234578899988877    479999999999999999999999999999999987642                367788


Q ss_pred             HHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC---cccccCCcccccccccccCC
Q 009980          144 AAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALLQDR  220 (521)
Q Consensus       144 ~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~  220 (521)
                      +..++.||+.||.|||++|++||||||+||++   +.++.+||+|||+++.......   .....+++.|+|||++.+..
T Consensus       139 ~~~~~~qi~~al~~LH~~givH~dlkp~Nili---~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  215 (304)
T cd05101         139 LVSCTYQVARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRV  215 (304)
T ss_pred             HHHHHHHHHHHHHHHHHCCeeecccccceEEE---cCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCC
Confidence            99999999999999999999999999999999   6778899999999976532221   12234567899999998888


Q ss_pred             CCchhhhHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          221 ITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       221 ~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      ++.++||||||+++|+|++ |..||.+.+..+....+..+....   ....++..+++++.+||..+|.+|||+.++++
T Consensus       216 ~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~  291 (304)
T cd05101         216 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMD---KPANCTNELYMMMRDCWHAIPSHRPTFKQLVE  291 (304)
T ss_pred             CCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcCC---CCCCCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence            9999999999999999998 899998888877777776554321   12468899999999999999999999999987

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=100.00  E-value=4e-40  Score=314.34  Aligned_cols=248  Identities=32%  Similarity=0.498  Sum_probs=203.1

Q ss_pred             eecccccccCceEEEEeEEc--cCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHH
Q 009980           13 EVTDILGRGGFSVVRRGIKK--TCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILV   90 (521)
Q Consensus        13 ~~~~~lG~G~~g~V~~a~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   90 (521)
                      ++.+.||.|+||.||+|...  ....+..|+||.++....                           ......+.+|+..
T Consensus         2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~---------------------------~~~~~~~~~e~~~   54 (259)
T PF07714_consen    2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSS---------------------------EEEEEEFLNEIQI   54 (259)
T ss_dssp             EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSS---------------------------HHHHHHHHHHHHH
T ss_pred             EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccc---------------------------cccceeeeecccc
Confidence            46789999999999999998  333567899999943111                           1124568899999


Q ss_pred             HHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 009980           91 MRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ--ERYMEVGAAAVIRQIAEGLAALHQANIVHRDL  168 (521)
Q Consensus        91 l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~al~~lH~~~i~H~dl  168 (521)
                      ++++     +||||+++++++...+..++|||||++|+|.+++...  ..++......|+.||+.||.|||+++++|++|
T Consensus        55 l~~l-----~h~ni~~~~g~~~~~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l  129 (259)
T PF07714_consen   55 LRKL-----RHPNIVKLYGFCIENEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNL  129 (259)
T ss_dssp             HHTH-----SBTTBE-EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-
T ss_pred             cccc-----ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            9999     9999999999999888899999999999999999986  77999999999999999999999999999999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCccCCCCCC---cccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CCCCC
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPF  244 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~pf  244 (521)
                      +|.||++   +.++.+||+|||++........   .....+...|+|||.+....++.++||||||+++|++++ |+.||
T Consensus       130 ~~~nill---~~~~~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~  206 (259)
T PF07714_consen  130 SPSNILL---DSNGQVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPF  206 (259)
T ss_dssp             SGGGEEE---ETTTEEEEESTTTGEETTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTT
T ss_pred             ccccccc---cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            9999999   6788999999999976522211   123346778999999998889999999999999999999 78999


Q ss_pred             CCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          245 IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       245 ~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      ...+..+....+..+.....   ...++..+.++|.+||..||.+|||+.++++
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~  257 (259)
T PF07714_consen  207 SDYDNEEIIEKLKQGQRLPI---PDNCPKDIYSLIQQCWSHDPEKRPSFQEILQ  257 (259)
T ss_dssp             TTSCHHHHHHHHHTTEETTS---BTTSBHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred             ccccccccccccccccccee---ccchhHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence            98888887777766544322   2457999999999999999999999999975

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.1e-39  Score=308.96  Aligned_cols=244  Identities=25%  Similarity=0.409  Sum_probs=208.1

Q ss_pred             ccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEI   88 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   88 (521)
                      .++|++.+.||.|+||.||+|..    .++.||||.+.....                             ....+.+|+
T Consensus         5 ~~~~~~~~~ig~g~~g~v~~~~~----~~~~v~iK~~~~~~~-----------------------------~~~~~~~e~   51 (256)
T cd05039           5 SKELKLGATIGKGEFGDVMLGDY----RGQKVAVKCLKDDST-----------------------------AAQAFLAEA   51 (256)
T ss_pred             hhhccceeeeecCCCceEEEEEe----cCcEEEEEEeccchh-----------------------------HHHHHHHHH
Confidence            46899999999999999999986    467899999854211                             234578899


Q ss_pred             HHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 009980           89 LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE--RYMEVGAAAVIRQIAEGLAALHQANIVHR  166 (521)
Q Consensus        89 ~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~al~~lH~~~i~H~  166 (521)
                      .+++++     +||||+++++++.+.+..|+||||+++++|.+++....  .+++..+..++.|++.||.|||++|++|+
T Consensus        52 ~~l~~l-----~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~  126 (256)
T cd05039          52 SVMTTL-----RHPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHR  126 (256)
T ss_pred             HHHHhc-----CCcceeeeEEEEcCCCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccch
Confidence            999998     99999999999999999999999999999999998765  68999999999999999999999999999


Q ss_pred             cCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CCCCCC
Q 009980          167 DLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFI  245 (521)
Q Consensus       167 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~pf~  245 (521)
                      ||||+||++   +.++.++|+|||.+........  ...++..|+|||.+....++.++|+||+|+++|++++ |..||.
T Consensus       127 di~p~Nili---~~~~~~~l~d~g~~~~~~~~~~--~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~  201 (256)
T cd05039         127 DLAARNVLV---SEDLVAKVSDFGLAKEASQGQD--SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYP  201 (256)
T ss_pred             hcccceEEE---eCCCCEEEcccccccccccccc--cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCC
Confidence            999999999   7788899999999986532221  2334667999999988889999999999999999997 999998


Q ss_pred             CCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          246 AQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       246 ~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      ..+.......+..+...   .....+|+.+.++|.+||..+|++|||+.+++.
T Consensus       202 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  251 (256)
T cd05039         202 RIPLKDVVPHVEKGYRM---EAPEGCPPEVYKVMKDCWELDPAKRPTFKQLRE  251 (256)
T ss_pred             CCCHHHHHHHHhcCCCC---CCccCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence            88777666665554221   112457899999999999999999999999986

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=100.00  E-value=1e-39  Score=317.60  Aligned_cols=259  Identities=26%  Similarity=0.384  Sum_probs=211.7

Q ss_pred             cccccccceeecccccccCceEEEEeEEccC---CCcceEEEEEeecCCCCCCCCCCCCCCCCCCCcccccccccccccc
Q 009980            4 ETRKLTDEYEVTDILGRGGFSVVRRGIKKTC---GETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVS   80 (521)
Q Consensus         4 ~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (521)
                      +.+.-.++|++.+.||+|+||.||+|..+..   .....+|+|.+......                           ..
T Consensus         6 ~~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~---------------------------~~   58 (293)
T cd05053           6 EWELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATE---------------------------KD   58 (293)
T ss_pred             ccccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCH---------------------------HH
Confidence            3445567999999999999999999988642   13467999998642110                           11


Q ss_pred             HHHHHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc----------------CCCCHHHH
Q 009980           81 DALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ----------------ERYMEVGA  144 (521)
Q Consensus        81 ~~~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~----------------~~~~~~~~  144 (521)
                      ...+.+|+.+++++    .+||||+++++++..++.+|+||||+.+|+|.+++...                +.+++..+
T Consensus        59 ~~~~~~E~~~l~~l----~~h~~i~~~~~~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~  134 (293)
T cd05053          59 LSDLVSEMEMMKMI----GKHKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDL  134 (293)
T ss_pred             HHHHHHHHHHHHhh----cCCCCeeeEEEEEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHH
Confidence            23477888888876    36999999999999999999999999999999998642                45889999


Q ss_pred             HHHHHHHHHHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC---cccccCCcccccccccccCCC
Q 009980          145 AAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALLQDRI  221 (521)
Q Consensus       145 ~~i~~qil~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~  221 (521)
                      ..++.|++.||.|||++||+||||||+||++   +.++.+||+|||+++.......   .....+++.|+|||.+.+..+
T Consensus       135 ~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  211 (293)
T cd05053         135 VSFAYQVARGMEFLASKKCIHRDLAARNVLV---TEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVY  211 (293)
T ss_pred             HHHHHHHHHHHHHHHHCCccccccceeeEEE---cCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCc
Confidence            9999999999999999999999999999999   6778899999999986543221   112235677999999988889


Q ss_pred             CchhhhHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          222 TSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       222 ~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      +.++||||+||++|+|++ |..||.+....+....+..+....   ....++..+.+|+.+||..||.+|||+.+++++
T Consensus       212 ~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~  287 (293)
T cd05053         212 THQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGYRME---KPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED  287 (293)
T ss_pred             CcccceeehhhHHHHHhcCCCCCCCCCCHHHHHHHHHcCCcCC---CCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence            999999999999999997 999998888777777666554221   124578999999999999999999999999974

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=100.00  E-value=1.8e-39  Score=318.09  Aligned_cols=259  Identities=27%  Similarity=0.413  Sum_probs=212.7

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      .....|...+.||.|+||.||+|+++.  ++..+|+|.+.......                         ......+.+
T Consensus        12 ~~~~~~~~~~~lg~g~~g~v~~~~~~~--~~~~~~ik~~~~~~~~~-------------------------~~~~~~~~~   64 (308)
T cd06634          12 DPEKLFSDLREIGHGSFGAVYFARDVR--NSEVVAIKKMSYSGKQS-------------------------NEKWQDIIK   64 (308)
T ss_pred             CcHHHHHHHHheeeCCCEEEEEEEEcC--CCcEEEEEEEecccccC-------------------------hHHHHHHHH
Confidence            345678889999999999999999987  77889999986432211                         011234678


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      |+.+++.+     +|||++++++++......|+||||+.| +|.+.+.. ...+++..+..++.|++.|+.|||++|++|
T Consensus        65 e~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H  138 (308)
T cd06634          65 EVRFLQKL-----RHPNTIQYRGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIH  138 (308)
T ss_pred             HHHHHHhC-----CCCCcccEEEEEEcCCeeEEEEEccCC-CHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence            99999998     999999999999999999999999974 77776653 456899999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccc---cCCCCchhhhHHHHHHHHHHHhCCC
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALL---QDRITSKSDMWSLGVILYILLSGYP  242 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~~ll~g~~  242 (521)
                      |||+|+||++   +.++.++|+|||++......   ....|++.|+|||.+.   ...++.++|||||||++|+|++|..
T Consensus       139 ~dl~p~nil~---~~~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~  212 (308)
T cd06634         139 RDVKAGNILL---SEPGLVKLGDFGSASIMAPA---NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKP  212 (308)
T ss_pred             CCCCHHhEEE---CCCCcEEECCcccceeecCc---ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCC
Confidence            9999999999   66788999999998765432   2346889999999974   3467889999999999999999999


Q ss_pred             CCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCC
Q 009980          243 PFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDS  306 (521)
Q Consensus       243 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~  306 (521)
                      ||...+.......+..+..+...  ...++..+++||.+||..+|.+|||+.++++|||+....
T Consensus       213 p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~~  274 (308)
T cd06634         213 PLFNMNAMSALYHIAQNESPALQ--SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRER  274 (308)
T ss_pred             CCccccHHHHHHHHhhcCCCCcC--cccccHHHHHHHHHHhhCCcccCCCHHHHhhCccccccC
Confidence            99876665555555544332211  235788999999999999999999999999999998653

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=100.00  E-value=2.1e-39  Score=308.96  Aligned_cols=242  Identities=25%  Similarity=0.391  Sum_probs=203.4

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ++|++.+.||+|+||.||+|..+    +..||+|.+...                              .....+.+|+.
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~----~~~~~~k~~~~~------------------------------~~~~~~~~e~~   51 (256)
T cd05082           6 KELKLLQTIGKGEFGDVMLGDYR----GNKVAVKCIKND------------------------------ATAQAFLAEAS   51 (256)
T ss_pred             HhCeeeeeecccCCCeEEEEEEc----CCcEEEEEeCCC------------------------------chHHHHHHHHH
Confidence            58999999999999999999764    567999997431                              11345788999


Q ss_pred             HHHHHhhccCCCCCccceeEEE-EeCCeEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 009980           90 VMRKIVENVSPHPNVIDLYDVY-EDQNGVHLILELCSGGELFDRIVAQE--RYMEVGAAAVIRQIAEGLAALHQANIVHR  166 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~-~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~al~~lH~~~i~H~  166 (521)
                      +++++     +|||++++++++ ..++..|+||||+++++|.+++....  .+++..+..++.|++.||.|||++|++||
T Consensus        52 ~l~~l-----~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~  126 (256)
T cd05082          52 VMTQL-----RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHR  126 (256)
T ss_pred             HHHhC-----CCCCeeeEEEEEEcCCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEecc
Confidence            99998     999999999975 45567999999999999999987644  37899999999999999999999999999


Q ss_pred             cCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CCCCCC
Q 009980          167 DLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFI  245 (521)
Q Consensus       167 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~pf~  245 (521)
                      ||||+||++   +.++.+||+|||++.......  ....++..|+|||++.+..++.++||||+||++|+|++ |++||.
T Consensus       127 dlkp~nil~---~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~  201 (256)
T cd05082         127 DLAARNVLV---SEDNVAKVSDFGLTKEASSTQ--DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYP  201 (256)
T ss_pred             ccchheEEE---cCCCcEEecCCccceeccccC--CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCC
Confidence            999999999   778899999999987543222  22345678999999988889999999999999999997 999998


Q ss_pred             CCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          246 AQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       246 ~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      ..+..+....+..+...   .....+++.+.+++.+||..+|++|||+.++++
T Consensus       202 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~  251 (256)
T cd05082         202 RIPLKDVVPRVEKGYKM---DAPDGCPPVVYDVMKQCWHLDAATRPSFLQLRE  251 (256)
T ss_pred             CCCHHHHHHHHhcCCCC---CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            87777766666554322   223568999999999999999999999999975

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=9.3e-42  Score=298.71  Aligned_cols=266  Identities=25%  Similarity=0.435  Sum_probs=216.2

Q ss_pred             cccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      ..+.|+-..+||+|.||.||+|+++.  +++.||+|.+--.....  |+                        .....+|
T Consensus        15 ~~~~yek~~kigqGtfgeVFkAr~~n--~~kkvalkkvlmeneKe--Gf------------------------pitalre   66 (376)
T KOG0669|consen   15 EVSKYEKLAKIGQGTFGEVFKARSKN--TGKKVALKKVLMENEKE--GF------------------------PITALRE   66 (376)
T ss_pred             cchHHHHHHhcCCchHHHHHHHhhcC--ccchhHHHHHHHhcccc--CC------------------------cHHHHHH
Confidence            34567778899999999999999998  78889998764322211  11                        1235789


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEe--------CCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYED--------QNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAAL  158 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~--------~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~l  158 (521)
                      +.+|..|     .|+|++.+++++..        ...+|+||.+|+. +|.-.+... .+++..++..++++++.||.|+
T Consensus        67 ikiL~~l-----kHenv~nliEic~tk~Tp~~r~r~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~i  140 (376)
T KOG0669|consen   67 IKILQLL-----KHENVVNLIEICRTKATPTNRDRATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYI  140 (376)
T ss_pred             HHHHHHh-----cchhHHHHHHHHhhccCCcccccceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHH
Confidence            9999998     99999999988743        3459999999976 787777654 6799999999999999999999


Q ss_pred             HHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC-----CcccccCCccccccccccc-CCCCchhhhHHHHH
Q 009980          159 HQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD-----PVVGLFGSIDYVSPEALLQ-DRITSKSDMWSLGV  232 (521)
Q Consensus       159 H~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~  232 (521)
                      |.+.|+|||+||.|+|+   +.++.+||+|||+++....+.     ..+..+.|.+|++||.+.+ ..|+++.|||+.||
T Consensus       141 Hr~kilHRDmKaaNvLI---t~dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgC  217 (376)
T KOG0669|consen  141 HRNKILHRDMKAANVLI---TKDGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGC  217 (376)
T ss_pred             HHhhHHhhcccHhhEEE---cCCceEEeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHH
Confidence            99999999999999999   888999999999997544322     1233456999999999886 46899999999999


Q ss_pred             HHHHHHhCCCCCCCCCcHHHHHHHHcCCCCCchhhhhcc-------------------------------CHHHHHHHHH
Q 009980          233 ILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNI-------------------------------SSSAKQLISS  281 (521)
Q Consensus       233 il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~-------------------------------s~~~~~li~~  281 (521)
                      |+.+|.+|.+.+.+.++...+..|..-........|+++                               .+++.+|+.+
T Consensus       218 imaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~  297 (376)
T KOG0669|consen  218 IMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEK  297 (376)
T ss_pred             HHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHH
Confidence            999999999999999988877776654444444444332                               2467899999


Q ss_pred             hccCCCCCCCCHHHHHcCCcccCCCCcch
Q 009980          282 LLTVDPNRRPSAQELLNHPWVIGDSAKEE  310 (521)
Q Consensus       282 ~l~~dp~~R~t~~~~l~h~~~~~~~~~~~  310 (521)
                      ||..||.+|+++.++|+|.||..++.+..
T Consensus       298 ll~~DP~kR~~ad~alnh~~F~kdp~pqa  326 (376)
T KOG0669|consen  298 LLKLDPTKRIDADQALNHDFFWKDPMPQA  326 (376)
T ss_pred             HhccCcccCcchHhhhchhhhhcCCcchh
Confidence            99999999999999999999998776543

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.6e-39  Score=316.45  Aligned_cols=255  Identities=25%  Similarity=0.341  Sum_probs=203.5

Q ss_pred             ccceeecccccccCceEEEEeEEccC------------CCcceEEEEEeecCCCCCCCCCCCCCCCCCCCcccccccccc
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTC------------GETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQ   76 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~------------~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (521)
                      .++|++.+.||+|+||.||+|++...            +....||+|.+.....                          
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~--------------------------   57 (295)
T cd05097           4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVT--------------------------   57 (295)
T ss_pred             hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCC--------------------------
Confidence            46899999999999999999987541            1234589999854211                          


Q ss_pred             ccccHHHHHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC------------CCCHHHH
Q 009980           77 VSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE------------RYMEVGA  144 (521)
Q Consensus        77 ~~~~~~~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~------------~~~~~~~  144 (521)
                       ......+.+|+.+++++     +||||+++++++...+..|+||||+.|++|.+++....            .+++..+
T Consensus        58 -~~~~~~~~~ei~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~  131 (295)
T cd05097          58 -KTARNDFLKEIKIMSRL-----KNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANL  131 (295)
T ss_pred             -HHHHHHHHHHHHHHHhC-----CCCCcCeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHH
Confidence             01234578899999999     99999999999999999999999999999999886532            3678889


Q ss_pred             HHHHHHHHHHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC---cccccCCcccccccccccCCC
Q 009980          145 AAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALLQDRI  221 (521)
Q Consensus       145 ~~i~~qil~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~  221 (521)
                      ..++.|++.||.|||++|++||||||+||++   +.++.+||+|||++........   .....+++.|+|||.+.++.+
T Consensus       132 ~~i~~~i~~al~~lH~~~i~H~dlkp~Nill---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  208 (295)
T cd05097         132 LYMAVQIASGMKYLASLNFVHRDLATRNCLV---GNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKF  208 (295)
T ss_pred             HHHHHHHHHHHHHHHhcCeeccccChhhEEE---cCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCc
Confidence            9999999999999999999999999999999   6677899999999875432211   122345678999999988889


Q ss_pred             CchhhhHHHHHHHHHHHh--CCCCCCCCCcHHHHHHHHc----CCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHH
Q 009980          222 TSKSDMWSLGVILYILLS--GYPPFIAQSNRQKQQMIMA----GEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQE  295 (521)
Q Consensus       222 ~~~~DiwslG~il~~ll~--g~~pf~~~~~~~~~~~i~~----~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~  295 (521)
                      +.++|+|||||++|+|++  |..||...+..+....+..    ............+|+.+++|+.+||..||++|||+.+
T Consensus       209 ~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~  288 (295)
T cd05097         209 TTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNK  288 (295)
T ss_pred             CchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHH
Confidence            999999999999999988  6789887776665544322    1111111122457899999999999999999999999


Q ss_pred             HHc
Q 009980          296 LLN  298 (521)
Q Consensus       296 ~l~  298 (521)
                      +++
T Consensus       289 i~~  291 (295)
T cd05097         289 IHH  291 (295)
T ss_pred             HHH
Confidence            975

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=100.00  E-value=1.7e-39  Score=327.11  Aligned_cols=256  Identities=23%  Similarity=0.364  Sum_probs=205.8

Q ss_pred             ccccceeecccccccCceEEEEeEEcc---CCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKT---CGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDAL   83 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~---~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (521)
                      .-.++|.+++.||+|+||.||+|+++.   ...++.||||+++.....                           .....
T Consensus        34 ~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~---------------------------~~~~~   86 (401)
T cd05107          34 MPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARS---------------------------SEKQA   86 (401)
T ss_pred             ecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCCh---------------------------hHHHH
Confidence            345678899999999999999998642   124568999999642211                           11235


Q ss_pred             HHHHHHHHHHHhhccCC-CCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC-------------------------
Q 009980           84 LTNEILVMRKIVENVSP-HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE-------------------------  137 (521)
Q Consensus        84 ~~~E~~~l~~l~~~~~~-hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-------------------------  137 (521)
                      +.+|+.++.++     . ||||+++++++...+..|+|||||.||+|.+++...+                         
T Consensus        87 ~~~E~~~l~~l-----~~H~niv~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (401)
T cd05107          87 LMSELKIMSHL-----GPHLNIVNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPL  161 (401)
T ss_pred             HHHHHHHHHhc-----CCCCCeEEEEEEEccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccc
Confidence            77899999988     5 9999999999999999999999999999999986532                         


Q ss_pred             -------------------------------------------------------------------------CCCHHHH
Q 009980          138 -------------------------------------------------------------------------RYMEVGA  144 (521)
Q Consensus       138 -------------------------------------------------------------------------~~~~~~~  144 (521)
                                                                                               .++...+
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  241 (401)
T cd05107         162 SQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDL  241 (401)
T ss_pred             cccccchhhhhccCccccccCCccccCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHH
Confidence                                                                                     2566778


Q ss_pred             HHHHHHHHHHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC---CcccccCCcccccccccccCCC
Q 009980          145 AAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD---PVVGLFGSIDYVSPEALLQDRI  221 (521)
Q Consensus       145 ~~i~~qil~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~  221 (521)
                      ..++.||+.||.|||++|++||||||+|||+   +..+.+||+|||+++......   ......+++.|+|||.+.+..+
T Consensus       242 ~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl---~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  318 (401)
T cd05107         242 VGFSYQVANGMEFLASKNCVHRDLAARNVLI---CEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLY  318 (401)
T ss_pred             HHHHHHHHHHHHHHhcCCcCcccCCcceEEE---eCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCC
Confidence            8899999999999999999999999999999   667789999999997543211   1223457888999999988889


Q ss_pred             CchhhhHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          222 TSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       222 ~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      +.++||||+||++|+|++ |..||......+...........+.  .+..++.++.+++.+||..+|.+||++.++++.
T Consensus       319 ~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~~~~~--~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~  395 (401)
T cd05107         319 TTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMA--KPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHL  395 (401)
T ss_pred             CcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcCCCCC--CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            999999999999999998 8999977665554444333332222  224578999999999999999999999999873

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=100.00  E-value=1.9e-39  Score=318.95  Aligned_cols=249  Identities=22%  Similarity=0.315  Sum_probs=195.5

Q ss_pred             CceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHHhhccCCC
Q 009980           22 GFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPH  101 (521)
Q Consensus        22 ~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~h  101 (521)
                      ++|.||.++++.  +++.||||++.......                          .....+.+|+.+++++     +|
T Consensus        12 ~~~~v~~~~~~~--~~~~~avK~~~~~~~~~--------------------------~~~~~~~~Ei~~l~~l-----~h   58 (314)
T cd08216          12 DLMIVHLAKHKP--TNTLVAVKKINLDSCSK--------------------------EDLKLLQQEIITSRQL-----QH   58 (314)
T ss_pred             CCceEEEEEecC--CCCEEEEEEEeccccch--------------------------hHHHHHHHHHHHHHhc-----CC
Confidence            445667677666  78899999987532111                          1234588999999998     99


Q ss_pred             CCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEeeCC
Q 009980          102 PNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ--ERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDR  179 (521)
Q Consensus       102 pniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~~~~~  179 (521)
                      |||+++++++...+..|++|||+.+++|.+++...  ..+++..+..++.|++.||.|||++||+||||||+||++   +
T Consensus        59 ~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili---~  135 (314)
T cd08216          59 PNILPYVTSFIVDSELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILL---S  135 (314)
T ss_pred             cchhhhhheeecCCeEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEE---e
Confidence            99999999999999999999999999999988753  468999999999999999999999999999999999999   6


Q ss_pred             CCCCEEEeecCCCccCCCCC--------CcccccCCccccccccccc--CCCCchhhhHHHHHHHHHHHhCCCCCCCCCc
Q 009980          180 EDSPLKIMDFGLSSVEGYTD--------PVVGLFGSIDYVSPEALLQ--DRITSKSDMWSLGVILYILLSGYPPFIAQSN  249 (521)
Q Consensus       180 ~~~~~kl~Dfg~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~~ll~g~~pf~~~~~  249 (521)
                      .++.+||+|||.+.......        ......++..|+|||++.+  ..++.++|+||+||++|+|++|..||.....
T Consensus       136 ~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~  215 (314)
T cd08216         136 GDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPA  215 (314)
T ss_pred             cCCceEEecCccceeeccccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCH
Confidence            67889999999886432111        1123357788999999875  3588999999999999999999999987655


Q ss_pred             HHHHHHHHcCCCCC------------------------------chhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          250 RQKQQMIMAGEFSF------------------------------YEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       250 ~~~~~~i~~~~~~~------------------------------~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      .........+....                              .......++.++.+|+.+||..||++|||+.++|+|
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~  295 (314)
T cd08216         216 TQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH  295 (314)
T ss_pred             HHHHHHHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence            44332222211100                              001112345678999999999999999999999999


Q ss_pred             CcccCCC
Q 009980          300 PWVIGDS  306 (521)
Q Consensus       300 ~~~~~~~  306 (521)
                      |||++-.
T Consensus       296 p~~~~~~  302 (314)
T cd08216         296 SFFKQCK  302 (314)
T ss_pred             chHhhhc
Confidence            9997543

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=100.00  E-value=1.6e-39  Score=323.03  Aligned_cols=254  Identities=24%  Similarity=0.367  Sum_probs=200.1

Q ss_pred             ccceeecccccccCceEEEEeEEcc---CCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKT---CGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~---~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      .++|++.+.||+|+||.||+|++..   ..+++.||||+++.....                           .....+.
T Consensus         6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~---------------------------~~~~~~~   58 (343)
T cd05103           6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH---------------------------SEHRALM   58 (343)
T ss_pred             hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCCh---------------------------HHHHHHH
Confidence            4789999999999999999998532   125688999998642211                           1124577


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeC-CeEEEEEeccCCCchHHHHHhc----------------------------
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQ-NGVHLILELCSGGELFDRIVAQ----------------------------  136 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~-~~~~lv~e~~~gg~L~~~l~~~----------------------------  136 (521)
                      +|+.++.++    .+||||+++++++... ..+++|||||+||+|.+++...                            
T Consensus        59 ~E~~~l~~l----~~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (343)
T cd05103          59 SELKILIHI----GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDL  134 (343)
T ss_pred             HHHHHHHhc----cCCccHhhhcceeecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhh
Confidence            899999887    4689999999987654 5689999999999999988642                            


Q ss_pred             ---------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEee
Q 009980          137 ---------------------------------------ERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLN  177 (521)
Q Consensus       137 ---------------------------------------~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~~~  177 (521)
                                                             ..++...+..++.|++.||.|||++||+||||||+||++  
T Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~--  212 (343)
T cd05103         135 KRRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILL--  212 (343)
T ss_pred             hhhccccccccccccccccCCCccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEE--
Confidence                                                   135777888999999999999999999999999999999  


Q ss_pred             CCCCCCEEEeecCCCccCCCCCC---cccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCCcHH-H
Q 009980          178 DREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQ-K  252 (521)
Q Consensus       178 ~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~-~  252 (521)
                       +.++.+||+|||++........   .....+++.|+|||.+.+..++.++||||+|+++|+|++ |..||....... .
T Consensus       213 -~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~  291 (343)
T cd05103         213 -SENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF  291 (343)
T ss_pred             -cCCCcEEEEecccccccccCcchhhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHH
Confidence             6778999999999875432211   112335677999999988889999999999999999997 999997755433 3


Q ss_pred             HHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          253 QQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       253 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      ...+..+.. ...+  ..+++++.+++.+||..||.+|||+.++++|
T Consensus       292 ~~~~~~~~~-~~~~--~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~  335 (343)
T cd05103         292 CRRLKEGTR-MRAP--DYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  335 (343)
T ss_pred             HHHHhccCC-CCCC--CCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            333333322 2111  3468899999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=100.00  E-value=2.4e-39  Score=314.23  Aligned_cols=252  Identities=26%  Similarity=0.383  Sum_probs=208.8

Q ss_pred             ccceeecccccccCceEEEEeEEcc---CCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKT---CGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~---~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      .++|++.+.||+|+||.||+|.+..   ..++..||+|++.....                           ......+.
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~---------------------------~~~~~~~~   56 (288)
T cd05050           4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS---------------------------ADMQADFQ   56 (288)
T ss_pred             hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcC---------------------------HHHHHHHH
Confidence            4689999999999999999998753   12567899999853211                           11234578


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC----------------------CCCHHH
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE----------------------RYMEVG  143 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~----------------------~~~~~~  143 (521)
                      +|+.+++++     +||||+++++++..+...|+||||+.+|+|.+++....                      .+++..
T Consensus        57 ~ei~~l~~l-----~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  131 (288)
T cd05050          57 REAALMAEF-----DHPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTE  131 (288)
T ss_pred             HHHHHHHhc-----CCCchheEEEEEcCCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHH
Confidence            899999998     99999999999999999999999999999999987432                      367888


Q ss_pred             HHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC---CcccccCCcccccccccccCC
Q 009980          144 AAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD---PVVGLFGSIDYVSPEALLQDR  220 (521)
Q Consensus       144 ~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~  220 (521)
                      +..++.|++.||.|||++|++||||||+||++   +.++.++|+|||++.......   ......+++.|+|||.+.+..
T Consensus       132 ~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  208 (288)
T cd05050         132 QLCIAKQVAAGMAYLSERKFVHRDLATRNCLV---GENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNR  208 (288)
T ss_pred             HHHHHHHHHHHHHHHHhCCeecccccHhheEe---cCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCC
Confidence            99999999999999999999999999999999   678889999999987543221   112223566799999998889


Q ss_pred             CCchhhhHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          221 ITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       221 ~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      ++.++|||||||++|+|++ |..||.+.+..+....+..+.....   ...++.++.+|+.+||+.+|.+|||+.++++
T Consensus       209 ~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~  284 (288)
T cd05050         209 YTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYYVRDGNVLSC---PDNCPLELYNLMRLCWSKLPSDRPSFASINR  284 (288)
T ss_pred             CCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCC---CCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence            9999999999999999998 8899988887777777766654321   2457899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=100.00  E-value=4.9e-39  Score=307.22  Aligned_cols=247  Identities=28%  Similarity=0.415  Sum_probs=204.6

Q ss_pred             cccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      ..++|++.+.||+|++|.||+|.+..   +..+|+|.+....                             .....+.+|
T Consensus         4 ~~~~~~~~~~ig~g~~~~v~~~~~~~---~~~~~lK~~~~~~-----------------------------~~~~~~~~E   51 (260)
T cd05069           4 PRESLRLDVKLGQGCFGEVWMGTWNG---TTKVAIKTLKPGT-----------------------------MMPEAFLQE   51 (260)
T ss_pred             ChHHeeeeeeecCcCCCeEEEEEEcC---CceEEEEEcccCC-----------------------------ccHHHHHHH
Confidence            34789999999999999999998864   3469999875321                             113457889


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ--ERYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      +.+++++     +||||+++++++. .+..|+||||+.+++|.+++...  ..+++..+..++.|++.||.|||+.|++|
T Consensus        52 ~~~l~~l-----~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H  125 (260)
T cd05069          52 AQIMKKL-----RHDKLVPLYAVVS-EEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIH  125 (260)
T ss_pred             HHHHHhC-----CCCCeeeEEEEEc-CCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEee
Confidence            9999998     9999999999875 45689999999999999998754  34789999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC--cccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CCC
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP--VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYP  242 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~  242 (521)
                      +||||+||++   +.++.++|+|||++........  .....++..|+|||...+..++.++||||+|+++|+|++ |.+
T Consensus       126 ~dl~~~Nill---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~  202 (260)
T cd05069         126 RDLRAANILV---GDNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRV  202 (260)
T ss_pred             cccCcceEEE---cCCCeEEECCCccceEccCCcccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCC
Confidence            9999999999   7788899999999975432221  122345678999999988889999999999999999999 999


Q ss_pred             CCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          243 PFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       243 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      ||.+....+....+..+.. .  ..+..++..+++++.+||.+||.+|||++++++
T Consensus       203 p~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  255 (260)
T cd05069         203 PYPGMVNREVLEQVERGYR-M--PCPQGCPESLHELMKLCWKKDPDERPTFEYIQS  255 (260)
T ss_pred             CCCCCCHHHHHHHHHcCCC-C--CCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence            9988877777666655422 1  123467899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=100.00  E-value=2.5e-40  Score=345.12  Aligned_cols=258  Identities=29%  Similarity=0.455  Sum_probs=209.8

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      +...+|+..+.||+||||.||+|+++-  +|+.||||.|+....                           ......+.+
T Consensus       476 RY~~DFEEL~lLGkGGFG~VvkVRNKl--DGr~YAIKKIpl~~s---------------------------~~~~skI~r  526 (1351)
T KOG1035|consen  476 RYLNDFEELELLGKGGFGSVVKVRNKL--DGREYAIKKIPLKAS---------------------------DKLYSKILR  526 (1351)
T ss_pred             hHhhhhHHHHHhcCCCCceEEEEeecc--cchhhhhhhccCchH---------------------------HHHHHHHHH
Confidence            466788999999999999999999999  889999999975431                           122345889


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEe-----------------------------------------------------
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYED-----------------------------------------------------  113 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~-----------------------------------------------------  113 (521)
                      |+..+.+|     +|||||+++..|..                                                     
T Consensus       527 EVk~LArL-----nHpNVVRYysAWVEs~~~~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~  601 (1351)
T KOG1035|consen  527 EVKLLARL-----NHPNVVRYYSAWVESTAELTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDK  601 (1351)
T ss_pred             HHHHHhhc-----CCcceeeeehhhhccCCccccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCcc
Confidence            99999999     99999999977521                                                     


Q ss_pred             ----------------------------------------------------------C--------CeEEEEEeccCCC
Q 009980          114 ----------------------------------------------------------Q--------NGVHLILELCSGG  127 (521)
Q Consensus       114 ----------------------------------------------------------~--------~~~~lv~e~~~gg  127 (521)
                                                                                .        ..+||-||||+..
T Consensus       602 sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~  681 (1351)
T KOG1035|consen  602 SSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKT  681 (1351)
T ss_pred             ccccccccccccccCCcccccccccccccccccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhh
Confidence                                                                      0        2478999999987


Q ss_pred             chHHHHHhcCCC-CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCC----------
Q 009980          128 ELFDRIVAQERY-MEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEG----------  196 (521)
Q Consensus       128 ~L~~~l~~~~~~-~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~----------  196 (521)
                      +|.+.+..+... -...++.+++||++||.|+|++||+||||||.||++   ++...|||+|||+|+...          
T Consensus       682 ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFL---d~~~~VKIGDFGLAt~~~~~~~~~d~~~  758 (1351)
T KOG1035|consen  682 LLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFL---DSRNSVKIGDFGLATDLKENLESIDQDL  758 (1351)
T ss_pred             HHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEE---cCCCCeeecccccchhhhhhhhhHhhcc
Confidence            777766665544 477899999999999999999999999999999999   788899999999997611          


Q ss_pred             ---------CCCCcccccCCcccccccccccCC---CCchhhhHHHHHHHHHHHhCCCCCCCCCc-HHHHHHHHcCCCCC
Q 009980          197 ---------YTDPVVGLFGSIDYVSPEALLQDR---ITSKSDMWSLGVILYILLSGYPPFIAQSN-RQKQQMIMAGEFSF  263 (521)
Q Consensus       197 ---------~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DiwslG~il~~ll~g~~pf~~~~~-~~~~~~i~~~~~~~  263 (521)
                               .....++.+||..|+|||++.+..   |+.|+|+|||||+++||+.   ||....+ ...+.++..+.++.
T Consensus       759 ~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~g~iP~  835 (1351)
T KOG1035|consen  759 SFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLRKGSIPE  835 (1351)
T ss_pred             CccccccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcccCCCCC
Confidence                     011345678999999999998654   9999999999999999985   6755433 33455666777776


Q ss_pred             chhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccC
Q 009980          264 YEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIG  304 (521)
Q Consensus       264 ~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~  304 (521)
                      +...+.+--+.-+.+|+.||+.||.+||||.|+|++.|+..
T Consensus       836 ~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s~llpp  876 (1351)
T KOG1035|consen  836 PADFFDPEHPEEASLIRWLLSHDPSKRPTATELLNSELLPP  876 (1351)
T ss_pred             CcccccccchHHHHHHHHHhcCCCccCCCHHHHhhccCCCc
Confidence            64445555566789999999999999999999999999975

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=100.00  E-value=4.2e-39  Score=310.93  Aligned_cols=249  Identities=26%  Similarity=0.403  Sum_probs=201.4

Q ss_pred             ccceeecccccccCceEEEEeEEccCCCcc----eEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCGETN----QVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALL   84 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~----~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (521)
                      .++|++.+.||+|+||+||+|....  +++    .+|+|.+.....                           ......+
T Consensus         6 ~~~~~~~~~lg~G~~~~vy~~~~~~--~~~~~~~~~~~k~~~~~~~---------------------------~~~~~~~   56 (279)
T cd05111           6 ETELRKLKLLGSGVFGTVHKGIWIP--EGDSIKIPVAIKTIQDRSG---------------------------RQTFQEI   56 (279)
T ss_pred             HhhceeccccCccCCcceEEEEEcC--CCCceeeEEEEeecccccc---------------------------hHHHHHH
Confidence            4689999999999999999999876  444    466666532110                           0112346


Q ss_pred             HHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 009980           85 TNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQANI  163 (521)
Q Consensus        85 ~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~al~~lH~~~i  163 (521)
                      ..|+..++++     +||||+++++++. ....++++||+.+|+|.+++.. .+.+++..+..++.||+.||.|||++|+
T Consensus        57 ~~~~~~l~~l-----~h~~iv~~~~~~~-~~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i  130 (279)
T cd05111          57 TDHMLAMGSL-----DHAYIVRLLGICP-GASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRM  130 (279)
T ss_pred             HHHHHHHhcC-----CCCCcceEEEEEC-CCccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            6677777777     9999999999875 4567899999999999999975 4578999999999999999999999999


Q ss_pred             eeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC---cccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-
Q 009980          164 VHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-  239 (521)
Q Consensus       164 ~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-  239 (521)
                      +||||||+||++   +.++.+||+|||+++.......   .....++..|+|||.+.+..++.++||||+||++|+|++ 
T Consensus       131 iH~dlkp~nili---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~  207 (279)
T cd05111         131 VHRNLAARNILL---KSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSY  207 (279)
T ss_pred             eccccCcceEEE---cCCCcEEEcCCccceeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcC
Confidence            999999999999   7788899999999976432221   123346778999999988889999999999999999998 


Q ss_pred             CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          240 GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       240 g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      |..||.+.........+..+......   ..++..+.+++.+|+..||.+|||+.++++
T Consensus       208 g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~c~~~~p~~Rps~~el~~  263 (279)
T cd05111         208 GAEPYAGMRPHEVPDLLEKGERLAQP---QICTIDVYMVMVKCWMIDENVRPTFKELAN  263 (279)
T ss_pred             CCCCCCCCCHHHHHHHHHCCCcCCCC---CCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            99999887776666656555433222   346788999999999999999999999876

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=100.00  E-value=3.7e-39  Score=307.48  Aligned_cols=249  Identities=31%  Similarity=0.468  Sum_probs=209.8

Q ss_pred             eeecccccccCceEEEEeEEccCC--CcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           12 YEVTDILGRGGFSVVRRGIKKTCG--ETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        12 Y~~~~~lG~G~~g~V~~a~~~~~~--~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      +++.+.||.|+||.||+|.+...+  .+..||+|++......                           .....+..|+.
T Consensus         1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~---------------------------~~~~~~~~e~~   53 (258)
T smart00219        1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADE---------------------------QQIEEFLREAR   53 (258)
T ss_pred             CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCCh---------------------------HHHHHHHHHHH
Confidence            357889999999999999998621  2388999998542211                           12456888999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCCeecc
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQER--YMEVGAAAVIRQIAEGLAALHQANIVHRD  167 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~--~~~~~~~~i~~qil~al~~lH~~~i~H~d  167 (521)
                      .++.+     +||||+++++++.+.+..|++|||++|++|.+++.....  +++..+..++.|++.||.|||++|++|+|
T Consensus        54 ~l~~l-----~~~~i~~~~~~~~~~~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~d  128 (258)
T smart00219       54 IMRKL-----DHPNIVKLLGVCTEEEPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRD  128 (258)
T ss_pred             HHHhc-----CCCchheEEEEEcCCCeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecc
Confidence            99998     999999999999999999999999999999999876554  89999999999999999999999999999


Q ss_pred             CCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcc--cccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CCCCC
Q 009980          168 LKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVV--GLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPF  244 (521)
Q Consensus       168 lkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~pf  244 (521)
                      |+|+||++   +.++.++|+|||++..........  ...+++.|+|||.+.+..++.++|+||+|+++|+|++ |.+||
T Consensus       129 l~~~nil~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~  205 (258)
T smart00219      129 LAARNCLV---GENLVVKISDFGLSRDLYDDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPY  205 (258)
T ss_pred             cccceEEE---ccCCeEEEcccCCceecccccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCC
Confidence            99999999   677889999999997654332111  1236789999999988889999999999999999998 89999


Q ss_pred             CCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          245 IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       245 ~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      ...+.......+..+......   ..++.++.+++.+||..||.+|||+.++++
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~  256 (258)
T smart00219      206 PGMSNEEVLEYLKKGYRLPKP---ENCPPEIYKLMLQCWAEDPEDRPTFSELVE  256 (258)
T ss_pred             CCCCHHHHHHHHhcCCCCCCC---CcCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence            888877777777766543322   348999999999999999999999999986

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=100.00  E-value=2.7e-39  Score=311.70  Aligned_cols=253  Identities=27%  Similarity=0.417  Sum_probs=212.0

Q ss_pred             cceeecccccccCceEEEEeEEccC---CCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTC---GETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      ++|++.+.||.|+||.||+|+.+.+   +..+.||+|.+.....                           ......+.+
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~---------------------------~~~~~~~~~   57 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKD---------------------------ENLQSEFRR   57 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccc---------------------------hHHHHHHHH
Confidence            6899999999999999999998642   2456799998753211                           012345788


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC---------CCCHHHHHHHHHHHHHHHHH
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE---------RYMEVGAAAVIRQIAEGLAA  157 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~---------~~~~~~~~~i~~qil~al~~  157 (521)
                      |+.+++++     +||||+++++++.+.+..|+||||+++|+|.+++....         .+++..+..++.|++.||.|
T Consensus        58 E~~~l~~l-----~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~  132 (275)
T cd05046          58 ELDMFRKL-----SHKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDH  132 (275)
T ss_pred             HHHHHHhc-----CCcceeeeEEEECCCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHH
Confidence            99999998     99999999999999999999999999999999998765         68999999999999999999


Q ss_pred             HHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC--CcccccCCcccccccccccCCCCchhhhHHHHHHHH
Q 009980          158 LHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD--PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY  235 (521)
Q Consensus       158 lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~  235 (521)
                      ||++||+||||||+||++   +..+.++++|||++.......  ......+++.|+|||.+.+..++.++||||||+++|
T Consensus       133 LH~~~i~H~dlkp~Nili---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~  209 (275)
T cd05046         133 LSNARFVHRDLAARNCLV---SSQREVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMW  209 (275)
T ss_pred             hhhcCcccCcCccceEEE---eCCCcEEEcccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHH
Confidence            999999999999999999   667889999999986432211  122335677899999998888899999999999999


Q ss_pred             HHHh-CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          236 ILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       236 ~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      +|++ |..||...........+..+...++.  ...++..+.+++.+||..+|.+|||+.+++.+
T Consensus       210 ~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~  272 (275)
T cd05046         210 EVFTQGELPFYGLSDEEVLNRLQAGKLELPV--PEGCPSRLYKLMTRCWAVNPKDRPSFSELVSA  272 (275)
T ss_pred             HHHhCCCCCccccchHHHHHHHHcCCcCCCC--CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence            9998 88999887777777777666554432  24578999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=100.00  E-value=3.4e-39  Score=313.49  Aligned_cols=250  Identities=25%  Similarity=0.368  Sum_probs=204.7

Q ss_pred             ceeecccccccCceEEEEeEEccCC---CcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980           11 EYEVTDILGRGGFSVVRRGIKKTCG---ETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus        11 ~Y~~~~~lG~G~~g~V~~a~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      +|++.+.||+|+||.||+|......   ....+|+|.+.....                           ......+.+|
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~---------------------------~~~~~~~~~E   53 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENAS---------------------------SSELRDLLSE   53 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCC---------------------------HHHHHHHHHH
Confidence            5889999999999999999875321   235689998753211                           0122457889


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc------------------------CCCCHHH
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ------------------------ERYMEVG  143 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~------------------------~~~~~~~  143 (521)
                      +.+++.+     .||||+++++.+...+..|+||||+.+++|.+++...                        ..+++..
T Consensus        54 ~~~l~~l-----~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  128 (290)
T cd05045          54 FNLLKQV-----NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGD  128 (290)
T ss_pred             HHHHhhC-----CCCCEeeEEEEEecCCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHH
Confidence            9999998     9999999999999999999999999999999988642                        2477889


Q ss_pred             HHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC---cccccCCcccccccccccCC
Q 009980          144 AAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALLQDR  220 (521)
Q Consensus       144 ~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~  220 (521)
                      +..++.|++.||.|||++|++||||||+||++   +.++.+||+|||+++.......   .....++..|+|||.+.+..
T Consensus       129 ~~~i~~~i~~~l~~LH~~~ivH~dikp~nill---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~  205 (290)
T cd05045         129 LISFAWQISRGMQYLAEMKLVHRDLAARNVLV---AEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHI  205 (290)
T ss_pred             HHHHHHHHHHHHHHHHHCCeehhhhhhheEEE---cCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCC
Confidence            99999999999999999999999999999999   6678899999999975432211   12234567899999998888


Q ss_pred             CCchhhhHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          221 ITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       221 ~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      ++.++||||||+++|+|++ |..||.+....+....+..+. ..+  ....++.++.+++.+||+.+|.+|||+.++++
T Consensus       206 ~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~  281 (290)
T cd05045         206 YTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTGY-RME--RPENCSEEMYNLMLTCWKQEPDKRPTFADISK  281 (290)
T ss_pred             cchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCC-CCC--CCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence            9999999999999999998 999998877777666555442 221  23568899999999999999999999999975

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=100.00  E-value=1e-39  Score=307.31  Aligned_cols=229  Identities=25%  Similarity=0.345  Sum_probs=189.0

Q ss_pred             cCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHHhhccCC
Q 009980           21 GGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSP  100 (521)
Q Consensus        21 G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~  100 (521)
                      |.+|.||+|+++.  +++.||+|.+.+...                                 ...|...+...     .
T Consensus         4 g~~~~v~~~~~~~--~~~~~~~K~i~~~~~---------------------------------~~~~~~~~~~~-----~   43 (237)
T cd05576           4 GVIDKVLLVMDTR--TQQTFILKGLRKSSE---------------------------------YSRERLTIIPH-----C   43 (237)
T ss_pred             cccceEEEEEEcc--CCcEEEEEeecchhh---------------------------------hhhHHHHHHhc-----C
Confidence            8999999999998  788999999864211                                 22333333333     7


Q ss_pred             CCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEeeCCC
Q 009980          101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRE  180 (521)
Q Consensus       101 hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~~~~~~  180 (521)
                      ||||+++++++.+.+.+|+||||+.||+|.+++.....+++..+..++.|++.||.|||++||+||||||+||++   +.
T Consensus        44 ~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~---~~  120 (237)
T cd05576          44 VPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILL---DD  120 (237)
T ss_pred             CCceeehhhheecCCeEEEEEecCCCCCHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE---cC
Confidence            999999999999999999999999999999999888889999999999999999999999999999999999999   77


Q ss_pred             CCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHcCC
Q 009980          181 DSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGE  260 (521)
Q Consensus       181 ~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~  260 (521)
                      ++.++++|||.+......  .....++..|+|||.+.+..++.++|+||+|+++|+|++|..|+......     + ...
T Consensus       121 ~~~~~l~df~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~-----~-~~~  192 (237)
T cd05576         121 RGHIQLTYFSRWSEVEDS--CDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG-----I-NTH  192 (237)
T ss_pred             CCCEEEecccchhccccc--cccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh-----c-ccc
Confidence            788999999987654322  22345677899999998888999999999999999999999987543211     0 000


Q ss_pred             CCCchhhhhccCHHHHHHHHHhccCCCCCCCCH-----HHHHcCCcc
Q 009980          261 FSFYEQTWKNISSSAKQLISSLLTVDPNRRPSA-----QELLNHPWV  302 (521)
Q Consensus       261 ~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~-----~~~l~h~~~  302 (521)
                      ...  .....+++.++++|.+||+.||++|||+     +++++||||
T Consensus       193 ~~~--~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~  237 (237)
T cd05576         193 TTL--NIPEWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF  237 (237)
T ss_pred             ccc--CCcccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence            011  1124578999999999999999999996     999999997

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-40  Score=302.02  Aligned_cols=261  Identities=22%  Similarity=0.401  Sum_probs=222.2

Q ss_pred             cccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      -.++|.++++||+|+|++|.++++++  +.+.||+|++++.-....                         ....-++.|
T Consensus       248 ~l~df~ll~vigrgsyakvl~~~~~~--t~qiyamkvvkkel~ndd-------------------------edidwvqte  300 (593)
T KOG0695|consen  248 GLQDFDLLRVIGRGSYAKVLLVRLKK--TDQIYAMKVVKKELVNDD-------------------------EDIDWVQTE  300 (593)
T ss_pred             ccccceeeeeecCcchhhhhheehcc--cceeeehhhHHHHhcCCc-------------------------ccchhHHhh
Confidence            45689999999999999999999998  889999999987644331                         112234555


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecc
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRD  167 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~d  167 (521)
                      -.+..+    .++||.+|.++.+|++++.+++|.||++||+|.=++.++..++|+.++.+...|+.||.|||++||+.||
T Consensus       301 k~vfe~----asn~pflvglhscfqtesrlffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrd  376 (593)
T KOG0695|consen  301 KHVFEQ----ASNNPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRD  376 (593)
T ss_pred             HHHHHh----ccCCCeEEehhhhhcccceEEEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeee
Confidence            555444    3699999999999999999999999999999988888889999999999999999999999999999999


Q ss_pred             CCCCcEEEeeCCCCCCEEEeecCCCcc-CCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCC
Q 009980          168 LKPENCLFLNDREDSPLKIMDFGLSSV-EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIA  246 (521)
Q Consensus       168 lkp~Nil~~~~~~~~~~kl~Dfg~a~~-~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~  246 (521)
                      ||.+|+|+   +..+.+||+|+|+++. ..+.+...+.||||.|+|||++.+..|+..+|.|+|||++++|+.|+.||.-
T Consensus       377 lkldnvll---daeghikltdygmcke~l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdi  453 (593)
T KOG0695|consen  377 LKLDNVLL---DAEGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDI  453 (593)
T ss_pred             ccccceEE---ccCCceeecccchhhcCCCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcce
Confidence            99999999   8999999999999985 3455566788999999999999999999999999999999999999999931


Q ss_pred             --------CCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCC------HHHHHcCCcccCCC
Q 009980          247 --------QSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPS------AQELLNHPWVIGDS  306 (521)
Q Consensus       247 --------~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t------~~~~l~h~~~~~~~  306 (521)
                              .++.-.++-|.......|    ..+|-.+..+++..|++||.+|..      ..++..||||....
T Consensus       454 vgm~n~d~ntedylfqvilekqirip----rslsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~id  523 (593)
T KOG0695|consen  454 VGMDNPDMNTEDYLFQVILEKQIRIP----RSLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSID  523 (593)
T ss_pred             ecCCCcccchhHHHHHHHhhhccccc----ceeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhCC
Confidence                    223344566666666655    457888889999999999999954      68999999997533

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=100.00  E-value=8.6e-41  Score=332.22  Aligned_cols=248  Identities=29%  Similarity=0.452  Sum_probs=199.7

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      .-|...+.||+|+||.||+++++.  +|+.||||.+++.....                           ..+..-+|++
T Consensus        13 y~W~~~e~LG~Ga~g~V~rgrnke--tG~~vAvK~~~~~~~~r---------------------------~~e~~~~Eie   63 (732)
T KOG4250|consen   13 YLWEMDERLGKGAFGNVYRGRNKE--TGRLVAVKTFNKESSLR---------------------------PRERWCREIE   63 (732)
T ss_pred             cceeehhhhcCCccceeeeecccc--cccchhHHhhhhhcccc---------------------------hHHHHHHHHH
Confidence            456778899999999999999999  89999999998754322                           2345778999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCC------eEEEEEeccCCCchHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQN------GVHLILELCSGGELFDRIVA---QERYMEVGAAAVIRQIAEGLAALHQ  160 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~------~~~lv~e~~~gg~L~~~l~~---~~~~~~~~~~~i~~qil~al~~lH~  160 (521)
                      +|+++     +|||||+++++=++..      ...+|||||.||+|...+..   ...++|.+...++..+..||.|||.
T Consensus        64 ilkKL-----nh~NIVk~f~iee~~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrE  138 (732)
T KOG4250|consen   64 ILKKL-----NHPNIVKLFDIEETKFLGLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRE  138 (732)
T ss_pred             HHHHc-----CchhhhhhcccCCccccCcccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHH
Confidence            99999     9999999999865443      56799999999999999874   3469999999999999999999999


Q ss_pred             CCCeeccCCCCcEEEeeCC-CCCCEEEeecCCCccCCCCCCcccccCCcccccccccc-cCCCCchhhhHHHHHHHHHHH
Q 009980          161 ANIVHRDLKPENCLFLNDR-EDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALL-QDRITSKSDMWSLGVILYILL  238 (521)
Q Consensus       161 ~~i~H~dlkp~Nil~~~~~-~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~~ll  238 (521)
                      +||+||||||.||++.... +....||+|||.|+.........+..||+.|++||++. ++.|+..+|.||+||++|++.
T Consensus       139 n~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~ca  218 (732)
T KOG4250|consen  139 NGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECA  218 (732)
T ss_pred             cCceeccCCCCcEEEeecCCCceEEeeecccccccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHh
Confidence            9999999999999985533 45568999999999988888888999999999999998 488999999999999999999


Q ss_pred             hCCCCCCCCCcH----HHHHHHHcCCC---------------CCc--hhhhhccCHH----HHHHHHHhccCCCCCCC
Q 009980          239 SGYPPFIAQSNR----QKQQMIMAGEF---------------SFY--EQTWKNISSS----AKQLISSLLTVDPNRRP  291 (521)
Q Consensus       239 ~g~~pf~~~~~~----~~~~~i~~~~~---------------~~~--~~~~~~~s~~----~~~li~~~l~~dp~~R~  291 (521)
                      ||..||......    ++...+.....               .+.  -+....+++.    +-..+..+|..+|.+|-
T Consensus       219 TG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~  296 (732)
T KOG4250|consen  219 TGELPFIPFGGPKNNKEIMWHIITKKPSGVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRG  296 (732)
T ss_pred             ccCCCCCcCCCccccchhhhhhhccCCCceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhC
Confidence            999999654333    23333322111               111  0111233443    34667888899999987

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=100.00  E-value=5.8e-39  Score=305.95  Aligned_cols=247  Identities=31%  Similarity=0.492  Sum_probs=208.0

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      .+|++.+.||.|+||.||+|.+.   .+..+|+|.+....                             .....+.+|+.
T Consensus         4 ~~~~~~~~ig~g~~g~v~~~~~~---~~~~~~~k~~~~~~-----------------------------~~~~~~~~e~~   51 (256)
T cd05112           4 SELTLVQEIGSGQFGLVWLGYWL---EKRKVAIKTIREGA-----------------------------MSEEDFIEEAQ   51 (256)
T ss_pred             hHeEEEeeecCcccceEEEEEEe---CCCeEEEEECCCCC-----------------------------CCHHHHHHHHH
Confidence            47999999999999999999876   35679999875321                             12345788999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQANIVHRDL  168 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~~~i~H~dl  168 (521)
                      +++++     .||||+++++++......|+||||+.|++|.+++... +.+++..+..++.|++.|+.|||+.|++|+||
T Consensus        52 ~l~~l-----~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl  126 (256)
T cd05112          52 VMMKL-----SHPKLVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDL  126 (256)
T ss_pred             HHHhC-----CCCCeeeEEEEEccCCceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccccc
Confidence            99998     9999999999999999999999999999999988754 56899999999999999999999999999999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCccCCCCCC--cccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CCCCCC
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSSVEGYTDP--VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFI  245 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~pf~  245 (521)
                      ||+||++   +.++.++|+|||.+........  .....++..|+|||.+.++.++.++|+||+|+++|+|++ |.+||.
T Consensus       127 ~p~ni~i---~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~  203 (256)
T cd05112         127 AARNCLV---GENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYE  203 (256)
T ss_pred             ccceEEE---cCCCeEEECCCcceeecccCcccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCC
Confidence            9999999   6778899999999875432211  112235678999999988889999999999999999998 999998


Q ss_pred             CCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          246 AQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       246 ~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      ..........+..+......   ...+..+.+|+.+||..+|++|||+.+++++
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~  254 (256)
T cd05112         204 NRSNSEVVETINAGFRLYKP---RLASQSVYELMQHCWKERPEDRPSFSLLLHQ  254 (256)
T ss_pred             cCCHHHHHHHHhCCCCCCCC---CCCCHHHHHHHHHHcccChhhCCCHHHHHHh
Confidence            88777777777655332221   3468899999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=100.00  E-value=4.5e-39  Score=318.95  Aligned_cols=261  Identities=23%  Similarity=0.339  Sum_probs=211.2

Q ss_pred             ccccccccceeecccccccCceEEEEeEEccCC-----CcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccc
Q 009980            3 QETRKLTDEYEVTDILGRGGFSVVRRGIKKTCG-----ETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQV   77 (521)
Q Consensus         3 ~~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (521)
                      +..+....+|++++.||+|+||.||+|++...+     ....||+|++.....                           
T Consensus         5 ~~~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~---------------------------   57 (334)
T cd05100           5 PKWELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDAT---------------------------   57 (334)
T ss_pred             cccccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccC---------------------------
Confidence            455666778999999999999999999864311     234689998753211                           


Q ss_pred             cccHHHHHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC----------------CCCH
Q 009980           78 SVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE----------------RYME  141 (521)
Q Consensus        78 ~~~~~~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~----------------~~~~  141 (521)
                      ......+.+|+.+++++    .+||||+++++++...+..|++|||+.+|+|.+++....                .++.
T Consensus        58 ~~~~~~~~~E~~~l~~l----~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~  133 (334)
T cd05100          58 DKDLSDLVSEMEMMKMI----GKHKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTF  133 (334)
T ss_pred             HHHHHHHHHHHHHHHhh----cCCCCeeeeeEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCH
Confidence            01234577899988887    369999999999999999999999999999999987532                3677


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC---cccccCCccccccccccc
Q 009980          142 VGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALLQ  218 (521)
Q Consensus       142 ~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~  218 (521)
                      ..+..++.|++.||.|||++|++||||||+||++   +.++.+||+|||+++.......   .....+++.|+|||++.+
T Consensus       134 ~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  210 (334)
T cd05100         134 KDLVSCAYQVARGMEYLASQKCIHRDLAARNVLV---TEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFD  210 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeeccccccceEEE---cCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhcc
Confidence            8889999999999999999999999999999999   6678899999999975432211   112234567999999998


Q ss_pred             CCCCchhhhHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHH
Q 009980          219 DRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELL  297 (521)
Q Consensus       219 ~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l  297 (521)
                      ..++.++||||||+++|+|++ |.+||.+.+..+....+..+....   ....++.++.+++.+||..+|.+|||+.+++
T Consensus       211 ~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~~p~~Rps~~ell  287 (334)
T cd05100         211 RVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGHRMD---KPANCTHELYMIMRECWHAVPSQRPTFKQLV  287 (334)
T ss_pred             CCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCC---CCCCCCHHHHHHHHHHcccChhhCcCHHHHH
Confidence            899999999999999999998 899998888777777766543221   1245788999999999999999999999999


Q ss_pred             cCC
Q 009980          298 NHP  300 (521)
Q Consensus       298 ~h~  300 (521)
                      .+.
T Consensus       288 ~~l  290 (334)
T cd05100         288 EDL  290 (334)
T ss_pred             HHH
Confidence            753

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=100.00  E-value=4.3e-39  Score=309.20  Aligned_cols=252  Identities=27%  Similarity=0.393  Sum_probs=207.0

Q ss_pred             ccceeecccccccCceEEEEeEEccCC-CcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCG-ETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      ..+|++.+.||+|+||.||+|..+..+ .+..||||++.....                           ......+..|
T Consensus         3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~---------------------------~~~~~~~~~e   55 (269)
T cd05065           3 VSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYT---------------------------EKQRRDFLSE   55 (269)
T ss_pred             hHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCC---------------------------HHHHHHHHHH
Confidence            357999999999999999999987632 234699999753211                           1123457889


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQANIVHR  166 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~al~~lH~~~i~H~  166 (521)
                      +.+++++     .||||+++++++..+...++||||+.|++|.+++.. .+.+++.++..++.|++.||.|||++|++|+
T Consensus        56 ~~~l~~l-----~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~  130 (269)
T cd05065          56 ASIMGQF-----DHPNIIHLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHR  130 (269)
T ss_pred             HHHHHhC-----CCcCcceEEEEECCCCceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeec
Confidence            9999998     999999999999999999999999999999998875 3568999999999999999999999999999


Q ss_pred             cCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCc---cccc---CCcccccccccccCCCCchhhhHHHHHHHHHHHh-
Q 009980          167 DLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPV---VGLF---GSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-  239 (521)
Q Consensus       167 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~---~~~~---gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-  239 (521)
                      ||||+||++   +.++.++|+|||++.........   ....   ++..|+|||.+.+..++.++||||+||++|++++ 
T Consensus       131 dl~p~nili---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~  207 (269)
T cd05065         131 DLAARNILV---NSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSY  207 (269)
T ss_pred             ccChheEEE---cCCCcEEECCCccccccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcC
Confidence            999999999   67788999999998754322111   1111   2457999999998899999999999999999886 


Q ss_pred             CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          240 GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       240 g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      |..||...+..+....+.... ..+  ....++..+.+++.+||..+|.+||++.+++.
T Consensus       208 g~~p~~~~~~~~~~~~i~~~~-~~~--~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  263 (269)
T cd05065         208 GERPYWDMSNQDVINAIEQDY-RLP--PPMDCPTALHQLMLDCWQKDRNARPKFGQIVS  263 (269)
T ss_pred             CCCCCCCCCHHHHHHHHHcCC-cCC--CcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            999998887777766665432 222  22467899999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=3.5e-39  Score=312.28  Aligned_cols=251  Identities=25%  Similarity=0.374  Sum_probs=197.4

Q ss_pred             ccce-eecccccccCceEEEEeEEcc--CCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            9 TDEY-EVTDILGRGGFSVVRRGIKKT--CGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         9 ~~~Y-~~~~~lG~G~~g~V~~a~~~~--~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      .++| ++.+.||+|+||+||++..+.  .+++..||+|++......                           .....+.
T Consensus         2 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~---------------------------~~~~~~~   54 (283)
T cd05080           2 HKRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQ---------------------------QNTSGWK   54 (283)
T ss_pred             ChhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccCh---------------------------HHHHHHH
Confidence            4566 999999999999998875421  236778999998642110                           1234577


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeC--CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQ--NGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANI  163 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~--~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i  163 (521)
                      +|+.+++++     +||||+++++++...  ..+|+||||+.+++|.+++.. ..+++..+..++.|++.||.|||++||
T Consensus        55 ~E~~~l~~l-----~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~-~~l~~~~~~~i~~~l~~~l~~lH~~~i  128 (283)
T cd05080          55 KEINILKTL-----YHENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPK-HKLNLAQLLLFAQQICEGMAYLHSQHY  128 (283)
T ss_pred             HHHHHHHhC-----CCCCEeeEEEEEecCCCceEEEEecCCCCCCHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            899999998     999999999987653  468999999999999998876 459999999999999999999999999


Q ss_pred             eeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC----cccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh
Q 009980          164 VHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP----VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS  239 (521)
Q Consensus       164 ~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~  239 (521)
                      +||||||+||++   +.++.++|+|||++........    .....++..|+|||.+.+..++.++||||||+++|+|++
T Consensus       129 ~H~dlkp~Nili---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~t  205 (283)
T cd05080         129 IHRDLAARNVLL---DNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLT  205 (283)
T ss_pred             eccccChheEEE---cCCCcEEEeecccccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHh
Confidence            999999999999   6778899999999976543221    112235677999999988889999999999999999999


Q ss_pred             CCCCCCCCCcHHH---------------HHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          240 GYPPFIAQSNRQK---------------QQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       240 g~~pf~~~~~~~~---------------~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      |..||........               ...+..+ ...  +....++..+.+++.+||..+|++|||+++++.
T Consensus       206 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~  276 (283)
T cd05080         206 HCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERG-MRL--PCPKNCPQEVYILMKNCWETEAKFRPTFRSLIP  276 (283)
T ss_pred             CCCCCCCCcchhhhhhcccccccchhhhhhhhhcC-CCC--CCCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence            9999865432110               0001111 111  112457899999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=100.00  E-value=5.8e-39  Score=308.16  Aligned_cols=252  Identities=29%  Similarity=0.389  Sum_probs=207.7

Q ss_pred             ccceeecccccccCceEEEEeEEccCC-CcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCG-ETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      .++|+..+.||+|+||.||+|+.+.++ ....+|+|.+.....                           ......+.+|
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~---------------------------~~~~~~~~~e   56 (268)
T cd05063           4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYT---------------------------EKQRQDFLSE   56 (268)
T ss_pred             hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCC---------------------------HHHHHHHHHH
Confidence            458899999999999999999987632 224799998754211                           0123457789


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQANIVHR  166 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~~~i~H~  166 (521)
                      +.+++++     +||||+++++++...+..|+||||+.+++|.+++... +.+++..+..++.|++.||.|||+.|++||
T Consensus        57 ~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~  131 (268)
T cd05063          57 ASIMGQF-----SHHNIIRLEGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHR  131 (268)
T ss_pred             HHHHhcC-----CCCCeeEEEEEEccCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecc
Confidence            9999888     9999999999999999999999999999999988753 578999999999999999999999999999


Q ss_pred             cCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCc--c--cccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CC
Q 009980          167 DLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPV--V--GLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GY  241 (521)
Q Consensus       167 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~--~--~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~  241 (521)
                      ||||+||++   +.++.++|+|||++.........  .  ....++.|+|||.+.+..++.++||||+||++|+|++ |.
T Consensus       132 dlkp~Nili---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~  208 (268)
T cd05063         132 DLAARNILV---NSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGE  208 (268)
T ss_pred             ccchhhEEE---cCCCcEEECCCccceecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCC
Confidence            999999999   67788999999998754322111  1  1123457999999988889999999999999999997 99


Q ss_pred             CCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          242 PPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       242 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      .||...+..+....+..+.. .+  ....++..+.+++.+||..+|++||++.++++
T Consensus       209 ~p~~~~~~~~~~~~i~~~~~-~~--~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~  262 (268)
T cd05063         209 RPYWDMSNHEVMKAINDGFR-LP--APMDCPSAVYQLMLQCWQQDRARRPRFVDIVN  262 (268)
T ss_pred             CCCCcCCHHHHHHHHhcCCC-CC--CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            99988887777777765432 11  22457899999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5e-40  Score=324.33  Aligned_cols=259  Identities=26%  Similarity=0.408  Sum_probs=216.0

Q ss_pred             ccccccceeecccccccCceEEEEeEEccCCC--cceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHH
Q 009980            5 TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGE--TNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDA   82 (521)
Q Consensus         5 ~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~--~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (521)
                      .+...++-.+.++||+|+||.||+|..+..+.  ...||||..+.....                         ......
T Consensus       152 Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~-------------------------~~~~~~  206 (474)
T KOG0194|consen  152 WELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSEL-------------------------TKEQIK  206 (474)
T ss_pred             cEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccc-------------------------cHHHHH
Confidence            44455666677999999999999999886322  123899998642111                         012345


Q ss_pred             HHHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC
Q 009980           83 LLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE-RYMEVGAAAVIRQIAEGLAALHQA  161 (521)
Q Consensus        83 ~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qil~al~~lH~~  161 (521)
                      .+.+|.++|+++     +|||||++|++......+|||||+|.||+|.+++.+.+ .++..+...++.+.+.||+|||++
T Consensus       207 e~m~EArvMr~l-----~H~NVVr~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k  281 (474)
T KOG0194|consen  207 EFMKEARVMRQL-----NHPNVVRFYGVAVLEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSK  281 (474)
T ss_pred             HHHHHHHHHHhC-----CCCCEEEEEEEEcCCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHC
Confidence            688999999999     99999999999999999999999999999999999887 499999999999999999999999


Q ss_pred             CCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcc-cccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-
Q 009980          162 NIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVV-GLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-  239 (521)
Q Consensus       162 ~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-  239 (521)
                      +++||||-..|+|+   ..+..+||+|||+|+....-.... ...-+..|+|||.+....|+.++||||+||++||+++ 
T Consensus       282 ~~IHRDIAARNcL~---~~~~~vKISDFGLs~~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~  358 (474)
T KOG0194|consen  282 NCIHRDIAARNCLY---SKKGVVKISDFGLSRAGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFEN  358 (474)
T ss_pred             CCcchhHhHHHhee---cCCCeEEeCccccccCCcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeecc
Confidence            99999999999999   666678999999998654111111 1224567999999999999999999999999999999 


Q ss_pred             CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          240 GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       240 g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      |..||.+....+....|....+..+.+  ...|.++..++.+|+..+|+.|||+.++.+
T Consensus       359 g~~Py~g~~~~~v~~kI~~~~~r~~~~--~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~  415 (474)
T KOG0194|consen  359 GAEPYPGMKNYEVKAKIVKNGYRMPIP--SKTPKELAKVMKQCWKKDPEDRPTMSTIKK  415 (474)
T ss_pred             CCCCCCCCCHHHHHHHHHhcCccCCCC--CCCHHHHHHHHHHhccCChhhccCHHHHHH
Confidence            899999999999999996655544332  357888999999999999999999998876

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=100.00  E-value=5.6e-39  Score=306.25  Aligned_cols=245  Identities=27%  Similarity=0.381  Sum_probs=203.6

Q ss_pred             ccccccCceEEEEeEEcc-CCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHH
Q 009980           16 DILGRGGFSVVRRGIKKT-CGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKI   94 (521)
Q Consensus        16 ~~lG~G~~g~V~~a~~~~-~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l   94 (521)
                      +.||+|++|.||+|.+.. .+....||||.+......                           .....+.+|+..++++
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~---------------------------~~~~~~~~e~~~l~~l   53 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS---------------------------DIMDDFLKEAAIMHSL   53 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH---------------------------HHHHHHHHHHHHHhhc
Confidence            478999999999999865 223347999998653220                           2245578899999998


Q ss_pred             hhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCc
Q 009980           95 VENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE--RYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPEN  172 (521)
Q Consensus        95 ~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~N  172 (521)
                           +||||+++++++.. ...++||||+++++|.+.+....  .+++..+..++.|++.||.|||++|++|+||+|+|
T Consensus        54 -----~h~~iv~~~~~~~~-~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~n  127 (257)
T cd05040          54 -----DHENLIRLYGVVLT-HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARN  127 (257)
T ss_pred             -----CCCCccceeEEEcC-CeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCccc
Confidence                 99999999999988 89999999999999999997754  68999999999999999999999999999999999


Q ss_pred             EEEeeCCCCCCEEEeecCCCccCCCCCC----cccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CCCCCCCC
Q 009980          173 CLFLNDREDSPLKIMDFGLSSVEGYTDP----VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQ  247 (521)
Q Consensus       173 il~~~~~~~~~~kl~Dfg~a~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~pf~~~  247 (521)
                      |++   +.++.+||+|||++........    .....++..|+|||.+.+..++.++||||+||++|+|++ |..||...
T Consensus       128 il~---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~  204 (257)
T cd05040         128 ILL---ASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGL  204 (257)
T ss_pred             EEE---ecCCEEEeccccccccccccccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCC
Confidence            999   6678999999999976543211    112346788999999988889999999999999999998 99999888


Q ss_pred             CcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          248 SNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       248 ~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      +..+....+........  ....+|..+.+++.+||..+|++|||+.++++
T Consensus       205 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~  253 (257)
T cd05040         205 SGSQILKKIDKEGERLE--RPEACPQDIYNVMLQCWAHNPADRPTFAALRE  253 (257)
T ss_pred             CHHHHHHHHHhcCCcCC--CCccCCHHHHHHHHHHCCCCcccCCCHHHHHH
Confidence            77777666664332222  12457899999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.2e-41  Score=354.58  Aligned_cols=260  Identities=25%  Similarity=0.419  Sum_probs=222.2

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      +++.-+|.-+..||.|.||.||.|.+..  +|...|+|-++-.....                          ..-+.+.
T Consensus      1231 snV~~rWqrg~~Ig~G~fG~VYtavN~~--tGellAvKEI~iq~~~~--------------------------k~~~~i~ 1282 (1509)
T KOG4645|consen 1231 SNVTFRWQRGNFIGGGTFGKVYTAVNLD--TGELLAVKEIKIQDSDH--------------------------KTFKLIA 1282 (1509)
T ss_pred             ccceeeeccccccCCcceeeeEEeecCC--ccchhhhhhhhcCcccc--------------------------ccCcchH
Confidence            4566688888999999999999999998  88889999987543321                          1123478


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      +|+.++..+     +|||+|+++++=...+.+||.||||.||+|.+.+...+-..|.....+..|++.|+.|||+.||||
T Consensus      1283 eEm~vlE~l-----nHpNlV~YyGVEvHRekv~IFMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVH 1357 (1509)
T KOG4645|consen 1283 EEMKVLEGL-----NHPNLVRYYGVEVHREKVYIFMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVH 1357 (1509)
T ss_pred             HHHHHHHhc-----cCccccccCceeecHHHHHHHHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCcee
Confidence            899999999     999999999999999999999999999999999998888889999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC-----CcccccCCcccccccccccC---CCCchhhhHHHHHHHHHH
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD-----PVVGLFGSIDYVSPEALLQD---RITSKSDMWSLGVILYIL  237 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~~l  237 (521)
                      |||||+||++   +.+|.+|++|||.|.....+.     ......|||-|||||++.+.   +...++|||||||++.||
T Consensus      1358 RDIK~aNI~L---d~~g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM 1434 (1509)
T KOG4645|consen 1358 RDIKPANILL---DFNGLIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEM 1434 (1509)
T ss_pred             cCCCccceee---ecCCcEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEe
Confidence            9999999999   888899999999998654332     23456899999999999864   456789999999999999


Q ss_pred             HhCCCCCCCCC-cHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccC
Q 009980          238 LSGYPPFIAQS-NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIG  304 (521)
Q Consensus       238 l~g~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~  304 (521)
                      +||+.||...+ +-.+...+..|..+..+   ..+|++.++||.+||..||.+|-++.|+|.|.|-+.
T Consensus      1435 ~tGkrPW~~~dne~aIMy~V~~gh~Pq~P---~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~~ 1499 (1509)
T KOG4645|consen 1435 ATGKRPWAELDNEWAIMYHVAAGHKPQIP---ERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGKS 1499 (1509)
T ss_pred             ecCCCchhhccchhHHHhHHhccCCCCCc---hhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhcccc
Confidence            99999996543 44556666666554333   449999999999999999999999999999999753

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=100.00  E-value=1.1e-38  Score=303.04  Aligned_cols=242  Identities=27%  Similarity=0.438  Sum_probs=200.2

Q ss_pred             ccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHHh
Q 009980           16 DILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIV   95 (521)
Q Consensus        16 ~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~   95 (521)
                      ++||+|+||.||+|...   .+..||+|.+.....                           ......+.+|+.+++++ 
T Consensus         1 ~~ig~g~~g~vy~~~~~---~~~~~a~K~~~~~~~---------------------------~~~~~~~~~e~~~l~~l-   49 (250)
T cd05085           1 ELLGKGNFGEVFKGTLK---DKTPVAVKTCKEDLP---------------------------QELKIKFLSEARILKQY-   49 (250)
T ss_pred             CccCCCCCceEEEEEec---CCcEEEEEecCCcCC---------------------------HHHHHHHHHHHHHHHhC-
Confidence            47999999999999864   467899999753211                           01223577899999998 


Q ss_pred             hccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q 009980           96 ENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCL  174 (521)
Q Consensus        96 ~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil  174 (521)
                          +||||+++++++...+..++||||++|++|.+++... ..+++..+..++.|++.||.|||++|++||||||+||+
T Consensus        50 ----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nil  125 (250)
T cd05085          50 ----DHPNIVKLIGVCTQRQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCL  125 (250)
T ss_pred             ----CCCCcCeEEEEEecCCccEEEEECCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEE
Confidence                9999999999999999999999999999999988653 46789999999999999999999999999999999999


Q ss_pred             EeeCCCCCCEEEeecCCCccCCCCCCc--ccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCCcHH
Q 009980          175 FLNDREDSPLKIMDFGLSSVEGYTDPV--VGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQ  251 (521)
Q Consensus       175 ~~~~~~~~~~kl~Dfg~a~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~  251 (521)
                      +   +.++.++|+|||++.........  ....+++.|+|||.+.+..++.++||||+|+++|++++ |..||.+.....
T Consensus       126 i---~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~  202 (250)
T cd05085         126 V---GENNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQ  202 (250)
T ss_pred             E---cCCCeEEECCCccceeccccccccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHH
Confidence            9   67788999999998754322111  11234567999999988889999999999999999998 999998887776


Q ss_pred             HHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          252 KQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       252 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      ....+..+...   .....++..+.+++.+||..+|++|||+.++++
T Consensus       203 ~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  246 (250)
T cd05085         203 AREQVEKGYRM---SCPQKCPDDVYKVMQRCWDYKPENRPKFSELQK  246 (250)
T ss_pred             HHHHHHcCCCC---CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence            66666554321   122458899999999999999999999999976

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=9.3e-39  Score=308.60  Aligned_cols=252  Identities=29%  Similarity=0.409  Sum_probs=208.2

Q ss_pred             cccceeecccccccCceEEEEeEEccCCC--cceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCGE--TNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~--~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      ..++|++.+.||+|+||.||+|.++.++.  ...||+|.+.....                           ......+.
T Consensus         5 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~---------------------------~~~~~~~~   57 (279)
T cd05057           5 KETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS---------------------------PKANKEIL   57 (279)
T ss_pred             CHHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC---------------------------HHHHHHHH
Confidence            34789999999999999999999876332  23689998754221                           12234578


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQANIV  164 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~~~i~  164 (521)
                      +|+.+++++     +||||+++++++.. ...++||||+.+|+|.+++... ..+++..+..++.|++.||.|||++|++
T Consensus        58 ~e~~~l~~l-----~h~~i~~~~~~~~~-~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~  131 (279)
T cd05057          58 DEAYVMASV-----DHPHVVRLLGICLS-SQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLV  131 (279)
T ss_pred             HHHHHHHhC-----CCCCcceEEEEEec-CceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEE
Confidence            899999998     99999999999987 7899999999999999998764 4689999999999999999999999999


Q ss_pred             eccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcc---cccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-C
Q 009980          165 HRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVV---GLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-G  240 (521)
Q Consensus       165 H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g  240 (521)
                      ||||||+||++   +.++.+||+|||.++.........   ...+++.|+|||.+....++.++|+||+|+++|++++ |
T Consensus       132 H~di~p~nil~---~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g  208 (279)
T cd05057         132 HRDLAARNVLV---KTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFG  208 (279)
T ss_pred             ecccCcceEEE---cCCCeEEECCCcccccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCC
Confidence            99999999999   677889999999997654322211   1223567999999988889999999999999999998 9


Q ss_pred             CCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          241 YPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       241 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      ..||.+....+....+..+.....   ....+..+.+++.+||..+|..|||+.++++
T Consensus       209 ~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~  263 (279)
T cd05057         209 AKPYEGIPAVEIPDLLEKGERLPQ---PPICTIDVYMVLVKCWMIDAESRPTFKELIN  263 (279)
T ss_pred             CCCCCCCCHHHHHHHHhCCCCCCC---CCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            999998887777777766543222   1346889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=100.00  E-value=7.3e-39  Score=307.83  Aligned_cols=251  Identities=27%  Similarity=0.372  Sum_probs=206.5

Q ss_pred             ccceeecccccccCceEEEEeEEccC-CCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTC-GETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      .++|.+.+.||+|+||.||+|.+... +....||||.......                           ......+.+|
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~---------------------------~~~~~~~~~e   57 (270)
T cd05056           5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTS---------------------------PSVREKFLQE   57 (270)
T ss_pred             hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCC---------------------------HHHHHHHHHH
Confidence            46799999999999999999998653 2345799998753211                           1123457889


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE-RYMEVGAAAVIRQIAEGLAALHQANIVHR  166 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qil~al~~lH~~~i~H~  166 (521)
                      +.+++++     .||||+++++++.+ +..|+||||+++++|.+++.... .+++..+..++.|++.||.|||+.|++||
T Consensus        58 ~~~l~~~-----~h~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~  131 (270)
T cd05056          58 AYIMRQF-----DHPHIVKLIGVITE-NPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHR  131 (270)
T ss_pred             HHHHHhC-----CCCchhceeEEEcC-CCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecc
Confidence            9999998     99999999998875 45789999999999999997644 58999999999999999999999999999


Q ss_pred             cCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCc--ccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CCCC
Q 009980          167 DLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPV--VGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPP  243 (521)
Q Consensus       167 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~p  243 (521)
                      ||||+||++   +..+.++|+|||++.........  ....+++.|+|||.+....++.++||||||+++|++++ |.+|
T Consensus       132 dl~p~nili---~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p  208 (270)
T cd05056         132 DIAARNVLV---SSPDCVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKP  208 (270)
T ss_pred             ccChheEEE---ecCCCeEEccCceeeecccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCC
Confidence            999999999   66788999999998754332211  12234567999999988889999999999999999986 9999


Q ss_pred             CCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          244 FIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       244 f~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      |.+.+..+....+..+....   .+..+|..+.+++.+|+..+|.+|||+.+++.
T Consensus       209 f~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~  260 (270)
T cd05056         209 FQGVKNNDVIGRIENGERLP---MPPNCPPTLYSLMTKCWAYDPSKRPRFTELKA  260 (270)
T ss_pred             CCCCCHHHHHHHHHcCCcCC---CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            98888777666666554322   23568999999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=100.00  E-value=2.7e-40  Score=285.69  Aligned_cols=254  Identities=27%  Similarity=0.449  Sum_probs=208.0

Q ss_pred             ccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEI   88 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   88 (521)
                      .++|++.+.+|+|.|+.|+.|++..  +++.++||+++.                               ...+.+.+|+
T Consensus        37 ~ddYeivrk~GRGKYSEVFeg~~~~--~~eK~ViKiLKP-------------------------------VkkkKIkREi   83 (338)
T KOG0668|consen   37 QDDYEIVRKVGRGKYSEVFEGINIT--NNEKCVIKILKP-------------------------------VKKKKIKREI   83 (338)
T ss_pred             cchHHHHHHHcCccHhhHhcccccC--CCceEEEeeech-------------------------------HHHHHHHHHH
Confidence            5789999999999999999999887  788899999864                               2346699999


Q ss_pred             HHHHHHhhccCCCCCccceeEEEEeC--CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 009980           89 LVMRKIVENVSPHPNVIDLYDVYEDQ--NGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHR  166 (521)
Q Consensus        89 ~~l~~l~~~~~~hpniv~~~~~~~~~--~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~  166 (521)
                      .+|+.|    +.||||++++++..++  ....||+||+...+...+.   +.++..+++.++.+++.||.||||+||+||
T Consensus        84 kIL~nL----~gg~NIi~L~DiV~Dp~SktpaLiFE~v~n~Dfk~ly---~tl~d~dIryY~~elLkALdyCHS~GImHR  156 (338)
T KOG0668|consen   84 KILQNL----RGGPNIIKLLDIVKDPESKTPSLIFEYVNNTDFKQLY---PTLTDYDIRYYIYELLKALDYCHSMGIMHR  156 (338)
T ss_pred             HHHHhc----cCCCCeeehhhhhcCccccCchhHhhhhccccHHHHh---hhhchhhHHHHHHHHHHHHhHHHhcCcccc
Confidence            999998    5799999999999776  4577999999886554433   568899999999999999999999999999


Q ss_pred             cCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCccccccccccc-CCCCchhhhHHHHHHHHHHHhCCCCC-
Q 009980          167 DLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQ-DRITSKSDMWSLGVILYILLSGYPPF-  244 (521)
Q Consensus       167 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~ll~g~~pf-  244 (521)
                      |+||.|+|+  +.....++|+|||+|...-+.......+.+.+|--||.+.. +.|+.+-|+||+||++..|+..+.|| 
T Consensus       157 DVKPhNvmI--dh~~rkLrlIDWGLAEFYHp~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFF  234 (338)
T KOG0668|consen  157 DVKPHNVMI--DHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF  234 (338)
T ss_pred             cCCcceeee--chhhceeeeeecchHhhcCCCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCccc
Confidence            999999999  34556799999999998877776666678889999999874 56899999999999999999988887 


Q ss_pred             CCCCcHHHHHHHHcC-------------CCCC-----------chhhhh---------ccCHHHHHHHHHhccCCCCCCC
Q 009980          245 IAQSNRQKQQMIMAG-------------EFSF-----------YEQTWK---------NISSSAKQLISSLLTVDPNRRP  291 (521)
Q Consensus       245 ~~~~~~~~~~~i~~~-------------~~~~-----------~~~~~~---------~~s~~~~~li~~~l~~dp~~R~  291 (521)
                      .+.++.+.+..|.+-             ....           ....|.         -+++++.+|+.++|..|..+|+
T Consensus       235 hG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRl  314 (338)
T KOG0668|consen  235 HGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERL  314 (338)
T ss_pred             CCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhcccccc
Confidence            445554444333220             1111           111221         1579999999999999999999


Q ss_pred             CHHHHHcCCcccC
Q 009980          292 SAQELLNHPWVIG  304 (521)
Q Consensus       292 t~~~~l~h~~~~~  304 (521)
                      ||.|++.||||..
T Consensus       315 TakEam~HpyF~~  327 (338)
T KOG0668|consen  315 TAKEAMAHPYFAP  327 (338)
T ss_pred             chHHHhcCchHHH
Confidence            9999999999963

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=100.00  E-value=7.6e-39  Score=311.92  Aligned_cols=255  Identities=27%  Similarity=0.336  Sum_probs=201.9

Q ss_pred             ccceeecccccccCceEEEEeEEcc--------------CCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCcccccccc
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKT--------------CGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTR   74 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~--------------~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (521)
                      .++|++.+.||+|+||.||+|.+..              .++...||+|++.....                        
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~------------------------   59 (296)
T cd05095           4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDAN------------------------   59 (296)
T ss_pred             hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCC------------------------
Confidence            4689999999999999999986542              12345689998753211                        


Q ss_pred             ccccccHHHHHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC-----------CCCHHH
Q 009980           75 KQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE-----------RYMEVG  143 (521)
Q Consensus        75 ~~~~~~~~~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-----------~~~~~~  143 (521)
                         ......+.+|+.+++.+     +||||+++++++...+..|+||||+.+++|.+++....           .+++..
T Consensus        60 ---~~~~~~~~~E~~~l~~l-----~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~  131 (296)
T cd05095          60 ---KNARNDFLKEIKIMSRL-----KDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYST  131 (296)
T ss_pred             ---HHHHHHHHHHHHHHHhC-----CCCCcceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHH
Confidence               11234578899999998     99999999999999999999999999999999987643           366778


Q ss_pred             HHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC---cccccCCcccccccccccCC
Q 009980          144 AAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALLQDR  220 (521)
Q Consensus       144 ~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~  220 (521)
                      +..++.|++.||.|||++|++||||||+||++   +.++.++|+|||+++.......   .....+++.|+|||...++.
T Consensus       132 ~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~  208 (296)
T cd05095         132 LIFMATQIASGMKYLSSLNFVHRDLATRNCLV---GKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGK  208 (296)
T ss_pred             HHHHHHHHHHHHHHHHHCCeecccCChheEEE---cCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCC
Confidence            99999999999999999999999999999999   6678899999999975432221   11223467899999988888


Q ss_pred             CCchhhhHHHHHHHHHHHh--CCCCCCCCCcHHHHHHHHc----CCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHH
Q 009980          221 ITSKSDMWSLGVILYILLS--GYPPFIAQSNRQKQQMIMA----GEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQ  294 (521)
Q Consensus       221 ~~~~~DiwslG~il~~ll~--g~~pf~~~~~~~~~~~i~~----~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~  294 (521)
                      ++.++|+|||||++|+|++  |..||...+..+.......    .......+....+++.+.+|+.+||..||.+|||+.
T Consensus       209 ~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~  288 (296)
T cd05095         209 FTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQ  288 (296)
T ss_pred             ccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHH
Confidence            9999999999999999998  7899977666554433211    000011111245788999999999999999999999


Q ss_pred             HHHc
Q 009980          295 ELLN  298 (521)
Q Consensus       295 ~~l~  298 (521)
                      ++++
T Consensus       289 ~i~~  292 (296)
T cd05095         289 EIHA  292 (296)
T ss_pred             HHHH
Confidence            9875

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=100.00  E-value=7.9e-39  Score=304.67  Aligned_cols=242  Identities=29%  Similarity=0.450  Sum_probs=203.3

Q ss_pred             ccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEI   88 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   88 (521)
                      .++|++.+.||+|+||.||++..    +++.||+|.+...                              .....+.+|+
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~----~~~~~~iK~~~~~------------------------------~~~~~~~~e~   50 (254)
T cd05083           5 LQKLTLGEIIGEGEFGAVLQGEY----TGQKVAVKNIKCD------------------------------VTAQAFLEET   50 (254)
T ss_pred             HHHceeeeeeccCCCCceEeccc----CCCceEEEeecCc------------------------------chHHHHHHHH
Confidence            36799999999999999999864    5678999997431                              1234578899


Q ss_pred             HHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 009980           89 LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE--RYMEVGAAAVIRQIAEGLAALHQANIVHR  166 (521)
Q Consensus        89 ~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~al~~lH~~~i~H~  166 (521)
                      .+++++     +||||+++++++..+ ..|+||||+.|++|.+++....  .+++..+..++.|++.||.|||++|++||
T Consensus        51 ~~l~~~-----~~~~i~~~~~~~~~~-~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~  124 (254)
T cd05083          51 AVMTKL-----HHKNLVRLLGVILHN-GLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHR  124 (254)
T ss_pred             HHHHhC-----CCCCcCeEEEEEcCC-CcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeecc
Confidence            999998     999999999998765 4799999999999999987643  47899999999999999999999999999


Q ss_pred             cCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CCCCCC
Q 009980          167 DLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFI  245 (521)
Q Consensus       167 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~pf~  245 (521)
                      ||||+||++   +.++.++|+|||++......  ......+..|+|||.+.+..++.++|+||+|+++|+|++ |.+||.
T Consensus       125 dl~p~nili---~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~  199 (254)
T cd05083         125 DLAARNILV---SEDGVAKVSDFGLARVGSMG--VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYP  199 (254)
T ss_pred             ccCcceEEE---cCCCcEEECCCccceecccc--CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCc
Confidence            999999999   67788999999998754321  122334667999999988889999999999999999998 999998


Q ss_pred             CCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          246 AQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       246 ~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      ..+..+....+..+....   ....+|..+.+++.+||..+|.+|||+.+++.
T Consensus       200 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  249 (254)
T cd05083         200 KMSLKEVKECVEKGYRME---PPEGCPADVYVLMTSCWETEPKKRPSFHKLRE  249 (254)
T ss_pred             cCCHHHHHHHHhCCCCCC---CCCcCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            888777776666553221   22568899999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=100.00  E-value=1.4e-38  Score=303.97  Aligned_cols=249  Identities=26%  Similarity=0.357  Sum_probs=206.5

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      +...++|++.+.||+|+||.||+|...   .+..+|+|.+....                             .....+.
T Consensus         2 ~~~~~~~~~~~~lg~g~~~~vy~~~~~---~~~~~~iK~~~~~~-----------------------------~~~~~~~   49 (260)
T cd05073           2 EIPRESLKLEKKLGAGQFGEVWMATYN---KHTKVAVKTMKPGS-----------------------------MSVEAFL   49 (260)
T ss_pred             cccccceeEEeEecCccceEEEEEEec---CCccEEEEecCCCh-----------------------------hHHHHHH
Confidence            346789999999999999999999865   34569999875311                             1234578


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ--ERYMEVGAAAVIRQIAEGLAALHQANI  163 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~al~~lH~~~i  163 (521)
                      +|+.+++++     +||||+++++++.. ...|++|||+++++|.+++...  ..++...+..++.|++.||.|||+.|+
T Consensus        50 ~e~~~l~~l-----~~~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i  123 (260)
T cd05073          50 AEANVMKTL-----QHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNY  123 (260)
T ss_pred             HHHHHHHhc-----CCCCcceEEEEEcC-CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            899999998     99999999999987 7789999999999999999763  357888899999999999999999999


Q ss_pred             eeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC--cccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-C
Q 009980          164 VHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP--VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-G  240 (521)
Q Consensus       164 ~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g  240 (521)
                      +|+||+|+||++   +..+.++|+|||.+........  .....++..|+|||.+....++.++|+|||||++|++++ |
T Consensus       124 ~H~dl~p~ni~i---~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g  200 (260)
T cd05073         124 IHRDLRAANILV---SASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYG  200 (260)
T ss_pred             cccccCcceEEE---cCCCcEEECCCcceeeccCCCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcC
Confidence            999999999999   7788999999999875432221  112235677999999988889999999999999999999 9


Q ss_pred             CCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          241 YPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       241 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      .+||.+.+.......+..+...   +.....+.++.+++.+||..+|++||++.+++.
T Consensus       201 ~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~  255 (260)
T cd05073         201 RIPYPGMSNPEVIRALERGYRM---PRPENCPEELYNIMMRCWKNRPEERPTFEYIQS  255 (260)
T ss_pred             CCCCCCCCHHHHHHHHhCCCCC---CCcccCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence            9999887777666666554321   223568899999999999999999999988875

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=100.00  E-value=1.7e-38  Score=305.00  Aligned_cols=261  Identities=26%  Similarity=0.438  Sum_probs=210.2

Q ss_pred             ceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHH
Q 009980           11 EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILV   90 (521)
Q Consensus        11 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   90 (521)
                      .|++.+.||+|+||.||+|.++.. .++.+|+|.+.........                  ..+........+.+|+.+
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~-~~~~~avk~~~~~~~~~~~------------------~~~~~~~~~~~~~~e~~~   61 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNN-GQNLLALKEINVHNPAFGK------------------DKRERDKSIGDIVSEVTI   61 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCC-CCceeeeeEeecccccccc------------------ccccchHHHHHHHHHHHH
Confidence            488999999999999999998752 4678999998654322100                  000111122335567776


Q ss_pred             HHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH-CCCee
Q 009980           91 MRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA----QERYMEVGAAAVIRQIAEGLAALHQ-ANIVH  165 (521)
Q Consensus        91 l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qil~al~~lH~-~~i~H  165 (521)
                      +.+.    .+||||+++++++..++..++||||++|++|.+++..    ...+++..++.++.|++.||.|||+ .|++|
T Consensus        62 l~~~----~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H  137 (269)
T cd08528          62 IKEQ----LRHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVH  137 (269)
T ss_pred             Hhhc----CCCCCeeeEEeeEccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceee
Confidence            6652    2899999999999999999999999999999888743    3568999999999999999999996 78999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCC
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFI  245 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~  245 (521)
                      +||+|.||++   +.++.++|+|||.+.............|+..|+|||.+.+..++.++|+||+|+++|+|++|++||.
T Consensus       138 ~dl~~~nil~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~  214 (269)
T cd08528         138 RDLTPNNIML---GEDDKVTITDFGLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFY  214 (269)
T ss_pred             cCCCHHHEEE---CCCCcEEEecccceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCccc
Confidence            9999999999   7778899999999987554433445578999999999998889999999999999999999999998


Q ss_pred             CCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          246 AQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       246 ~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      ..........+..+......  ...+++.+.+++.+||..||++|||+.++..+
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~  266 (269)
T cd08528         215 STNMLSLATKIVEAVYEPLP--EGMYSEDVTDVITSCLTPDAEARPDIIQVSAM  266 (269)
T ss_pred             ccCHHHHHHHHhhccCCcCC--cccCCHHHHHHHHHHCCCCCccCCCHHHHHHH
Confidence            87776666666655543322  23578999999999999999999999998753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=7.5e-39  Score=310.07  Aligned_cols=252  Identities=25%  Similarity=0.342  Sum_probs=199.0

Q ss_pred             cceeecccccccCceEEEEeEEcc--CCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKT--CGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~--~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      .-|++.+.||+|+||.||+|....  ..++..||+|.++.....                           .....+.+|
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~---------------------------~~~~~~~~e   56 (284)
T cd05079           4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGG---------------------------NHIADLKKE   56 (284)
T ss_pred             hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccH---------------------------HHHHHHHHH
Confidence            347899999999999999998532  226788999998542111                           123458899


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEeC--CeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYEDQ--NGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQANIV  164 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~~--~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~~~i~  164 (521)
                      +.+++++     .||||+++++++...  ...++||||++|++|.+++... ..+++..+..++.|++.||.|||++|++
T Consensus        57 ~~~l~~l-----~h~~i~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~  131 (284)
T cd05079          57 IEILRNL-----YHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYV  131 (284)
T ss_pred             HHHHHhC-----CCCCeeeeeeEEecCCCCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence            9999998     999999999998775  5789999999999999998764 3589999999999999999999999999


Q ss_pred             eccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC----cccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhC
Q 009980          165 HRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP----VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSG  240 (521)
Q Consensus       165 H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g  240 (521)
                      ||||||+||++   +.++.++|+|||+++.......    .....|+..|+|||.+.+..++.++||||+||++|+|+++
T Consensus       132 H~dlkp~Nil~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~  208 (284)
T cd05079         132 HRDLAARNVLV---ESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTY  208 (284)
T ss_pred             ecccchheEEE---cCCCCEEECCCccccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcC
Confidence            99999999999   6678899999999976543221    1234467789999999888899999999999999999998


Q ss_pred             CCCCCCCCc---------------HHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          241 YPPFIAQSN---------------RQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       241 ~~pf~~~~~---------------~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      ..|+.....               ......+..+..   .+.+..++..+.+|+.+||+.||.+|||+.+++++
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~  279 (284)
T cd05079         209 CDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKR---LPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEG  279 (284)
T ss_pred             CCCCccccchhhhhcccccccccHHHHHHHHHcCcc---CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence            776532211               111111122211   11235689999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=100.00  E-value=2.1e-38  Score=306.35  Aligned_cols=252  Identities=23%  Similarity=0.348  Sum_probs=207.0

Q ss_pred             ccceeecccccccCceEEEEeEEccCC--CcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCG--ETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~--~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      .++|++.+.||+|+||.||+|.+..++  .+..||+|.+.....                           ......+.+
T Consensus         5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~---------------------------~~~~~~~~~   57 (280)
T cd05043           5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHAS---------------------------EIQVTLLLQ   57 (280)
T ss_pred             hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCC---------------------------HHHHHHHHH
Confidence            578999999999999999999987522  367899998753211                           122355788


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEe-CCeEEEEEeccCCCchHHHHHhc--------CCCCHHHHHHHHHHHHHHHHH
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYED-QNGVHLILELCSGGELFDRIVAQ--------ERYMEVGAAAVIRQIAEGLAA  157 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~-~~~~~lv~e~~~gg~L~~~l~~~--------~~~~~~~~~~i~~qil~al~~  157 (521)
                      |+.+++++     +||||+++++++.. +...+++++|+.+++|.+++...        ..+++..+..++.|++.||.|
T Consensus        58 e~~~l~~l-----~h~ni~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~  132 (280)
T cd05043          58 ESCLLYGL-----SHQNILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSY  132 (280)
T ss_pred             HHHHHHhC-----CCCCCCeEEEEEecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHH
Confidence            99999998     99999999998765 57789999999999999988653        458899999999999999999


Q ss_pred             HHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCc---ccccCCcccccccccccCCCCchhhhHHHHHHH
Q 009980          158 LHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPV---VGLFGSIDYVSPEALLQDRITSKSDMWSLGVIL  234 (521)
Q Consensus       158 lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il  234 (521)
                      ||+++++||||||+||++   +.++.+||+|||+++........   ....++..|+|||.+.+..++.++||||+||++
T Consensus       133 LH~~~i~H~di~p~nil~---~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l  209 (280)
T cd05043         133 LHKRGVIHKDIAARNCVI---DEELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLL  209 (280)
T ss_pred             HHHCCEeecccCHhhEEE---cCCCcEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHH
Confidence            999999999999999999   67788999999999754322211   123456779999999888899999999999999


Q ss_pred             HHHHh-CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          235 YILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       235 ~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      |++++ |++||...+..+....+..+. .+.  ....+|+++.+++.+||..+|++|||+.++++
T Consensus       210 ~el~~~g~~p~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~  271 (280)
T cd05043         210 WELMTLGQTPYVEIDPFEMAAYLKDGY-RLA--QPINCPDELFAVMACCWALDPEERPSFSQLVQ  271 (280)
T ss_pred             HHHhcCCCCCcCcCCHHHHHHHHHcCC-CCC--CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            99999 999998877666665555442 222  22457899999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=100.00  E-value=2.1e-38  Score=304.48  Aligned_cols=247  Identities=26%  Similarity=0.363  Sum_probs=194.2

Q ss_pred             ccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHHh
Q 009980           16 DILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIV   95 (521)
Q Consensus        16 ~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~   95 (521)
                      +.||+|+||.||+|......++..+|+|.+......                           .....+.+|+.+++++ 
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~---------------------------~~~~~~~~E~~~l~~l-   52 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASV---------------------------QEQMKFLEEAQPYRSL-   52 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCCCh---------------------------HHHHHHHHHHHHHHhC-
Confidence            469999999999998765446678999987542210                           1234578899999998 


Q ss_pred             hccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCC
Q 009980           96 ENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE-----RYMEVGAAAVIRQIAEGLAALHQANIVHRDLKP  170 (521)
Q Consensus        96 ~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-----~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp  170 (521)
                          +||||+++++++.+...+++||||+++|+|.+++....     ..++..+..++.|++.||.|||++|++||||||
T Consensus        53 ----~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp  128 (269)
T cd05087          53 ----QHSNLLQCLGQCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLAL  128 (269)
T ss_pred             ----CCCCEeeEEEEEcCCCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCc
Confidence                99999999999999999999999999999999986432     356678889999999999999999999999999


Q ss_pred             CcEEEeeCCCCCCEEEeecCCCccCCCCCC---cccccCCcccccccccccC-------CCCchhhhHHHHHHHHHHHh-
Q 009980          171 ENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALLQD-------RITSKSDMWSLGVILYILLS-  239 (521)
Q Consensus       171 ~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~-------~~~~~~DiwslG~il~~ll~-  239 (521)
                      +||++   +..+.++|+|||++........   .....|++.|+|||++.+.       .++.++|+||+|+++|+|++ 
T Consensus       129 ~nil~---~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~  205 (269)
T cd05087         129 RNCLL---TADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFEL  205 (269)
T ss_pred             ceEEE---cCCCcEEECCccccccccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhC
Confidence            99999   6678899999999875432211   1234578889999998642       35789999999999999996 


Q ss_pred             CCCCCCCCCcHHHHHHHHc-CCCCCchhh-hhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          240 GYPPFIAQSNRQKQQMIMA-GEFSFYEQT-WKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       240 g~~pf~~~~~~~~~~~i~~-~~~~~~~~~-~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      |.+||......+....... .....+.+. ....++.+.+++.+|+ .+|++|||+++++.
T Consensus       206 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~  265 (269)
T cd05087         206 GSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHL  265 (269)
T ss_pred             CCCCCCCCChHHHHHHHhhcccCCCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence            9999987766555433322 222222221 1246788999999998 68999999999985

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=4.4e-39  Score=307.13  Aligned_cols=243  Identities=21%  Similarity=0.327  Sum_probs=191.0

Q ss_pred             ccccccCceEEEEeEEccCCC-----cceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHH
Q 009980           16 DILGRGGFSVVRRGIKKTCGE-----TNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILV   90 (521)
Q Consensus        16 ~~lG~G~~g~V~~a~~~~~~~-----~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   90 (521)
                      +.||+|+||.||+|.++..+.     ...||+|.+.....                            .....+.+|+.+
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~----------------------------~~~~~~~~e~~~   52 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHR----------------------------NYSESFFEAASM   52 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhH----------------------------HHHHHHHHHHHH
Confidence            479999999999999865321     23478887643211                            123456778888


Q ss_pred             HHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCC
Q 009980           91 MRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE-RYMEVGAAAVIRQIAEGLAALHQANIVHRDLK  169 (521)
Q Consensus        91 l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qil~al~~lH~~~i~H~dlk  169 (521)
                      ++.+     .||||+++++++..+...++||||+.+|+|.+++...+ .+++..+..++.||+.||.|||++||+|||||
T Consensus        53 l~~~-----~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlk  127 (258)
T cd05078          53 MSQL-----SHKHLVLNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVC  127 (258)
T ss_pred             HHhC-----CCCChhheeeEEEeCCCcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCc
Confidence            8888     99999999999999999999999999999999987654 58999999999999999999999999999999


Q ss_pred             CCcEEEeeCCC-----CCCEEEeecCCCccCCCCCCcccccCCccccccccccc-CCCCchhhhHHHHHHHHHHHhC-CC
Q 009980          170 PENCLFLNDRE-----DSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQ-DRITSKSDMWSLGVILYILLSG-YP  242 (521)
Q Consensus       170 p~Nil~~~~~~-----~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~ll~g-~~  242 (521)
                      |+||++..++.     .+.++++|||++......   ....+++.|+|||.+.+ ..++.++||||+|+++|+|++| .+
T Consensus       128 p~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~  204 (258)
T cd05078         128 AKNVLLIREEDRKTGNPPFIKLSDPGISITVLPK---EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDK  204 (258)
T ss_pred             cceEEEecccccccCCCceEEecccccccccCCc---hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCC
Confidence            99999954321     124799999998754332   23457889999999976 4578999999999999999998 46


Q ss_pred             CCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          243 PFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       243 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      ||...+..... .+.......+    ...+.++.+++.+||+.||++|||++++++.
T Consensus       205 ~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  256 (258)
T cd05078         205 PLSALDSQKKL-QFYEDRHQLP----APKWTELANLINQCMDYEPDFRPSFRAIIRD  256 (258)
T ss_pred             ChhhccHHHHH-HHHHccccCC----CCCcHHHHHHHHHHhccChhhCCCHHHHHHh
Confidence            66555444332 2333333333    2356789999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=100.00  E-value=3.4e-38  Score=302.96  Aligned_cols=247  Identities=26%  Similarity=0.373  Sum_probs=192.6

Q ss_pred             ccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHHh
Q 009980           16 DILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIV   95 (521)
Q Consensus        16 ~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~   95 (521)
                      +.||+|+||.||+|..........+|+|.+.....                           ......+.+|+..++.+ 
T Consensus         1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~---------------------------~~~~~~~~~e~~~~~~l-   52 (269)
T cd05042           1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASAT---------------------------PDEQLLFLQEVQPYREL-   52 (269)
T ss_pred             CcCCccCCceEEEEEEecCCCCeEEEEeecCccCC---------------------------hHHHHHHHHHHHHHHhC-
Confidence            46999999999999765433445688887643211                           01234577899999888 


Q ss_pred             hccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCC
Q 009980           96 ENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE-----RYMEVGAAAVIRQIAEGLAALHQANIVHRDLKP  170 (521)
Q Consensus        96 ~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-----~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp  170 (521)
                          +||||+++++.+.....+|+||||+++|+|.+++....     ..++..+..++.||+.||.|||++||+||||||
T Consensus        53 ----~h~nii~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp  128 (269)
T cd05042          53 ----NHPNVLQCLGQCIESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLAL  128 (269)
T ss_pred             ----CCCCcceEEEEECCCCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccH
Confidence                99999999999999999999999999999999987643     246778899999999999999999999999999


Q ss_pred             CcEEEeeCCCCCCEEEeecCCCccCCCCC---CcccccCCccccccccccc-------CCCCchhhhHHHHHHHHHHHh-
Q 009980          171 ENCLFLNDREDSPLKIMDFGLSSVEGYTD---PVVGLFGSIDYVSPEALLQ-------DRITSKSDMWSLGVILYILLS-  239 (521)
Q Consensus       171 ~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-------~~~~~~~DiwslG~il~~ll~-  239 (521)
                      +||++   +.++.+||+|||++.......   ......+++.|+|||++..       ..++.++||||+||++|+|++ 
T Consensus       129 ~Nill---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~  205 (269)
T cd05042         129 RNCQL---TADLSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTA  205 (269)
T ss_pred             hheEe---cCCCcEEEeccccccccccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhC
Confidence            99999   778899999999986532221   1122345678999998743       356789999999999999999 


Q ss_pred             CCCCCCCCCcHHHHHHHHcC-CCCCchh-hhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          240 GYPPFIAQSNRQKQQMIMAG-EFSFYEQ-TWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       240 g~~pf~~~~~~~~~~~i~~~-~~~~~~~-~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      |.+||......+....+... ...++.+ ....+++.+.+++..|+ .||++|||++++++
T Consensus       206 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~  265 (269)
T cd05042         206 ADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHE  265 (269)
T ss_pred             CCCCCCcCCHHHHHHHHhhccCccCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHH
Confidence            88899877666555544333 2232222 22457888999999998 59999999999986

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=100.00  E-value=3.1e-38  Score=308.63  Aligned_cols=252  Identities=27%  Similarity=0.399  Sum_probs=202.5

Q ss_pred             ccceeecccccccCceEEEEeEEccCCCc--ceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCGET--NQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~--~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      .++|++.+.||+|+||.||+|.+..++..  ..||+|.+.....                           ......+.+
T Consensus         6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~---------------------------~~~~~~~~~   58 (303)
T cd05110           6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTG---------------------------PKANVEFMD   58 (303)
T ss_pred             hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCC---------------------------HHHHHHHHH
Confidence            46889999999999999999998763221  2578888753211                           011234778


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE-RYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      |+.+++++     +||||+++++++... ..++++||+++|+|.+++.... .+++..+..++.|++.||.|||++||+|
T Consensus        59 e~~~~~~l-----~h~niv~~~~~~~~~-~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH  132 (303)
T cd05110          59 EALIMASM-----DHPHLVRLLGVCLSP-TIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVH  132 (303)
T ss_pred             HHHHHHhC-----CCCCcccEEEEEcCC-CceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeec
Confidence            99999888     999999999998754 4679999999999999987644 6899999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC---cccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CC
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GY  241 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~  241 (521)
                      |||||+||++   +.++.+||+|||+++.......   .....+++.|+|||.+.+..++.++|||||||++|+|++ |.
T Consensus       133 ~dikp~Nill---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~  209 (303)
T cd05110         133 RDLAARNVLV---KSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGG  209 (303)
T ss_pred             cccccceeee---cCCCceEEccccccccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCC
Confidence            9999999999   6677899999999986432221   122345778999999988889999999999999999997 99


Q ss_pred             CCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          242 PPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       242 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      .||.+.........+..+... +.  +..++..+.+++.+|+..+|++||++.+++..
T Consensus       210 ~p~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~  264 (303)
T cd05110         210 KPYDGIPTREIPDLLEKGERL-PQ--PPICTIDVYMVMVKCWMIDADSRPKFKELAAE  264 (303)
T ss_pred             CCCCCCCHHHHHHHHHCCCCC-CC--CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            999877665555555443322 21  24578899999999999999999999998863

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>PHA02882 putative serine/threonine kinase; Provisional

Probab=100.00  E-value=2.3e-38  Score=308.02  Aligned_cols=262  Identities=17%  Similarity=0.192  Sum_probs=190.1

Q ss_pred             ccccccceeecccccccCceEEEEeEEccCCC-cceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccc-cHH
Q 009980            5 TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGE-TNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSV-SDA   82 (521)
Q Consensus         5 ~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~   82 (521)
                      .+...++|++.+.||+|+||.||+|.+..++. +..+|+|+........                     ..+... ...
T Consensus         7 ~~i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~---------------------~~e~~~~~~~   65 (294)
T PHA02882          7 IDITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETI---------------------VMETLVYNNI   65 (294)
T ss_pred             eccCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCch---------------------hhHHHHHHhh
Confidence            34556899999999999999999999876211 5567777643211100                     000000 000


Q ss_pred             HHHHHHHHHHHHhhccCCCCCccceeEEEEeCC----eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 009980           83 LLTNEILVMRKIVENVSPHPNVIDLYDVYEDQN----GVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAAL  158 (521)
Q Consensus        83 ~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~----~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~l  158 (521)
                      .-..++..+..+  ....|+||+++++++....    ..+++++++.. ++.+.+......++..+..++.|++.||.||
T Consensus        66 ~~~~~~~~~~~~--~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~l  142 (294)
T PHA02882         66 YDIDKIALWKNI--HNIDHLGIPKYYGCGSFKRCRMYYRFILLEKLVE-NTKEIFKRIKCKNKKLIKNIMKDMLTTLEYI  142 (294)
T ss_pred             hhHHHHHHHHHh--ccCCCCCCCcEEEeeeEecCCceEEEEEEehhcc-CHHHHHHhhccCCHHHHHHHHHHHHHHHHHH
Confidence            001122222222  1228999999999876543    45788888744 6767666656678999999999999999999


Q ss_pred             HHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC--------CcccccCCcccccccccccCCCCchhhhHHH
Q 009980          159 HQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD--------PVVGLFGSIDYVSPEALLQDRITSKSDMWSL  230 (521)
Q Consensus       159 H~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl  230 (521)
                      |+++|+||||||+|||+   +.++.++|+|||+|+......        ......||+.|+|||++.+..++.++||||+
T Consensus       143 H~~~iiHrDiKp~Nill---~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSl  219 (294)
T PHA02882        143 HEHGISHGDIKPENIMV---DGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESL  219 (294)
T ss_pred             HhCCeecCCCCHHHEEE---cCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHH
Confidence            99999999999999999   677889999999997543211        1123469999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCCCCCCcH-HH--------HHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          231 GVILYILLSGYPPFIAQSNR-QK--------QQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       231 G~il~~ll~g~~pf~~~~~~-~~--------~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      ||++|+|++|.+||.+.+.. ..        ...+..+...     .++.++.+.+++..|+..+|++||++.++++
T Consensus       220 G~~l~el~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~  291 (294)
T PHA02882        220 GYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFIKRLHEGKIK-----IKNANKFIYDFIECVTKLSYEEKPDYDALIK  291 (294)
T ss_pred             HHHHHHHHhCCCCCCccccchHHHHHhHHHHHHHhhhhhhc-----cCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence            99999999999999876432 21        2222222222     2456899999999999999999999999875

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=100.00  E-value=5.1e-38  Score=298.52  Aligned_cols=242  Identities=30%  Similarity=0.449  Sum_probs=200.8

Q ss_pred             ccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHHh
Q 009980           16 DILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIV   95 (521)
Q Consensus        16 ~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~   95 (521)
                      +.||.|+||.||+|.+..   ++.||+|.+......                           .....+.+|+.+++++ 
T Consensus         1 ~~lg~g~~g~v~~~~~~~---~~~v~~K~~~~~~~~---------------------------~~~~~~~~e~~~l~~l-   49 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKG---NTEVAVKTCRSTLPP---------------------------DLKRKFLQEAEILKQY-   49 (251)
T ss_pred             CccccCCCceEEEEEEeC---CCcEEEEeccccCCH---------------------------HHHHHHHHHHHHHHhC-
Confidence            479999999999998863   678999987542210                           1234578899999998 


Q ss_pred             hccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q 009980           96 ENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCL  174 (521)
Q Consensus        96 ~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil  174 (521)
                          +||||+++++++......|+||||+.|++|.+++.. ...+++..+..++.|++.||.|||++|++||||+|+||+
T Consensus        50 ----~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nil  125 (251)
T cd05041          50 ----DHPNIVKLIGVCVQKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCL  125 (251)
T ss_pred             ----CCCCeEEEEEEEecCCCeEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEE
Confidence                999999999999999999999999999999999865 356889999999999999999999999999999999999


Q ss_pred             EeeCCCCCCEEEeecCCCccCCCCCCc---ccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCCcH
Q 009980          175 FLNDREDSPLKIMDFGLSSVEGYTDPV---VGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNR  250 (521)
Q Consensus       175 ~~~~~~~~~~kl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~  250 (521)
                      +   +.++.++|+|||++.........   ....++..|+|||.+.++.++.++|+||||+++|+|++ |..||......
T Consensus       126 i---~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~  202 (251)
T cd05041         126 V---GENNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQ  202 (251)
T ss_pred             E---cCCCcEEEeeccccccccCCcceeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHH
Confidence            9   77788999999998754321111   11223567999999988889999999999999999999 89999887776


Q ss_pred             HHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          251 QKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       251 ~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      .....+.... ..+  ....++..+.+++.+||..+|.+|||+.++++
T Consensus       203 ~~~~~~~~~~-~~~--~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~  247 (251)
T cd05041         203 QTRERIESGY-RMP--APQLCPEEIYRLMLQCWAYDPENRPSFSEIYN  247 (251)
T ss_pred             HHHHHHhcCC-CCC--CCccCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence            6666665442 111  12457899999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=3.2e-38  Score=301.79  Aligned_cols=243  Identities=20%  Similarity=0.290  Sum_probs=189.8

Q ss_pred             ccccccCceEEEEeEEccC----------CCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980           16 DILGRGGFSVVRRGIKKTC----------GETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus        16 ~~lG~G~~g~V~~a~~~~~----------~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      +.||+|+||.||+|.....          .....||+|.+.....                            .....+.
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~----------------------------~~~~~~~   52 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHR----------------------------DISLAFF   52 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhh----------------------------hHHHHHH
Confidence            4689999999999985321          1233588888643211                            1223577


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQANIV  164 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~al~~lH~~~i~  164 (521)
                      +|+.+++.+     +||||+++++++..+...++||||+.+|+|..++.. ...+++..+..++.||+.||.|||++||+
T Consensus        53 ~~~~~l~~l-----~hp~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iv  127 (262)
T cd05077          53 ETASMMRQV-----SHKHIVLLYGVCVRDVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLV  127 (262)
T ss_pred             HHHHHHHhC-----CCCCEeeEEEEEecCCCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeE
Confidence            788888888     999999999999999999999999999999888765 35689999999999999999999999999


Q ss_pred             eccCCCCcEEEeeCCC----CCCEEEeecCCCccCCCCCCcccccCCcccccccccc-cCCCCchhhhHHHHHHHHHHH-
Q 009980          165 HRDLKPENCLFLNDRE----DSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALL-QDRITSKSDMWSLGVILYILL-  238 (521)
Q Consensus       165 H~dlkp~Nil~~~~~~----~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~~ll-  238 (521)
                      ||||||+|||+..+..    ...++++|||++......   ....|++.|+|||.+. +..++.++||||+||++|+|+ 
T Consensus       128 H~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~  204 (262)
T cd05077         128 HGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLSR---QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICY  204 (262)
T ss_pred             CCCCCcccEEEecCCccCCCCceeEeCCCCCCccccCc---ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHh
Confidence            9999999999943211    123899999998754322   2345788899999886 467899999999999999997 


Q ss_pred             hCCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          239 SGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       239 ~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      +|..||......+.. ....+.....    ...+.++++|+.+||..||.+||++.+++++
T Consensus       205 ~~~~p~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~  260 (262)
T cd05077         205 NGEIPLKDKTLAEKE-RFYEGQCMLV----TPSCKELADLMTHCMNYDPNQRPFFRAIMRD  260 (262)
T ss_pred             CCCCCCCCcchhHHH-HHHhcCccCC----CCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence            588998766544432 2233332222    2246789999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=2.2e-39  Score=329.73  Aligned_cols=251  Identities=27%  Similarity=0.445  Sum_probs=215.7

Q ss_pred             cceeecccccccCceEEEEeEEccC---CCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTC---GETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      .+-++.+.||+|+||+||+|+...-   +....||||.++.....                           .....|++
T Consensus       486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~---------------------------~~~~dF~R  538 (774)
T KOG1026|consen  486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAEN---------------------------QARQDFRR  538 (774)
T ss_pred             hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccH---------------------------HHHHHHHH
Confidence            3455678999999999999986531   24467999999754321                           23567999


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC--------------CCCHHHHHHHHHHHH
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE--------------RYMEVGAAAVIRQIA  152 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--------------~~~~~~~~~i~~qil  152 (521)
                      |+.++..|     +|||||++++++..++.+|+|+|||..|+|.++|....              +++..+...|+.||+
T Consensus       539 EaeLla~l-----~H~nIVrLlGVC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIA  613 (774)
T KOG1026|consen  539 EAELLAEL-----QHPNIVRLLGVCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIA  613 (774)
T ss_pred             HHHHHHhc-----cCCCeEEEEEEEccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHH
Confidence            99999999     99999999999999999999999999999999996532              278899999999999


Q ss_pred             HHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC---CcccccCCcccccccccccCCCCchhhhHH
Q 009980          153 EGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD---PVVGLFGSIDYVSPEALLQDRITSKSDMWS  229 (521)
Q Consensus       153 ~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Diws  229 (521)
                      .|+.||-++.+|||||-..|.||   .++-.|||+|||+++..-..+   ......-+..|||||.+..++|+.++||||
T Consensus       614 aGM~YLs~~~FVHRDLATRNCLV---ge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs  690 (774)
T KOG1026|consen  614 AGMEYLSSHHFVHRDLATRNCLV---GENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWS  690 (774)
T ss_pred             HHHHHHHhCcccccchhhhhcee---ccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhh
Confidence            99999999999999999999999   788899999999998542221   111223466899999999999999999999


Q ss_pred             HHHHHHHHHh-CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          230 LGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       230 lG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      +||+|||+++ |+.||.+.++++..+.|.++.. ++  .+.++|.++.+|+..||+.+|.+|||+.+|-.
T Consensus       691 ~GVvLWEIFsyG~QPy~glSn~EVIe~i~~g~l-L~--~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~  757 (774)
T KOG1026|consen  691 FGVVLWEIFSYGKQPYYGLSNQEVIECIRAGQL-LS--CPENCPTEVYSLMLECWNENPKRRPSFKEIHS  757 (774)
T ss_pred             hhhhhhhhhccccCcccccchHHHHHHHHcCCc-cc--CCCCCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence            9999999999 9999999999999999999987 33  34789999999999999999999999998864

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=100.00  E-value=5.3e-38  Score=300.42  Aligned_cols=245  Identities=25%  Similarity=0.421  Sum_probs=195.4

Q ss_pred             ccccccCceEEEEeEEccC-CCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHH
Q 009980           16 DILGRGGFSVVRRGIKKTC-GETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKI   94 (521)
Q Consensus        16 ~~lG~G~~g~V~~a~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l   94 (521)
                      +.||+|+||.||+|.+... +....||||.+.....                           ......+.+|+.+++.+
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~---------------------------~~~~~~~~~e~~~l~~l   53 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITD---------------------------LEEVEQFLKEGIIMKDF   53 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCC---------------------------HHHHHHHHHHHHHHccC
Confidence            4689999999999987532 2446799998743110                           01224567888888888


Q ss_pred             hhccCCCCCccceeEEEE-eCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCc
Q 009980           95 VENVSPHPNVIDLYDVYE-DQNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPEN  172 (521)
Q Consensus        95 ~~~~~~hpniv~~~~~~~-~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~N  172 (521)
                           +||||+++++++. .++..++||||+.+|+|.+++... ...++..+..++.|++.||.|||+.|++||||||+|
T Consensus        54 -----~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~n  128 (262)
T cd05058          54 -----SHPNVLSLLGICLPSEGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARN  128 (262)
T ss_pred             -----CCCCcceEEEEeecCCCCcEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcce
Confidence                 9999999999765 456689999999999999998764 346778888999999999999999999999999999


Q ss_pred             EEEeeCCCCCCEEEeecCCCccCCCCC-----CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CCCCCCC
Q 009980          173 CLFLNDREDSPLKIMDFGLSSVEGYTD-----PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIA  246 (521)
Q Consensus       173 il~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~pf~~  246 (521)
                      |++   +.++.+||+|||+++......     ......+++.|+|||.+.+..++.++|||||||++|+|++ |.+||..
T Consensus       129 ili---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~  205 (262)
T cd05058         129 CML---DESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD  205 (262)
T ss_pred             EEE---cCCCcEEECCccccccccCCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCC
Confidence            999   677889999999987543211     1123346778999999988889999999999999999999 5777877


Q ss_pred             CCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          247 QSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       247 ~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      .+..+....+..+.....   ...+|+.+.+++.+||..+|++||++.+++.
T Consensus       206 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~  254 (262)
T cd05058         206 VDSFDITVYLLQGRRLLQ---PEYCPDPLYEVMLSCWHPKPEMRPTFSELVS  254 (262)
T ss_pred             CCHHHHHHHHhcCCCCCC---CCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            776666666655543222   1346889999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=100.00  E-value=2.1e-38  Score=304.36  Aligned_cols=248  Identities=29%  Similarity=0.451  Sum_probs=199.4

Q ss_pred             ccccccCceEEEEeEEccC----CCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHH
Q 009980           16 DILGRGGFSVVRRGIKKTC----GETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVM   91 (521)
Q Consensus        16 ~~lG~G~~g~V~~a~~~~~----~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l   91 (521)
                      +.||+|+||.||+|+.+..    ..+..+|||.+.+....                           .....+.+|+.++
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~---------------------------~~~~~~~~e~~~l   53 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATD---------------------------QEKKEFLKEAHLM   53 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhcccch---------------------------hhHHHHHHHHHHH
Confidence            4699999999999988641    12367999987542110                           1234577899999


Q ss_pred             HHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 009980           92 RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-------ERYMEVGAAAVIRQIAEGLAALHQANIV  164 (521)
Q Consensus        92 ~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-------~~~~~~~~~~i~~qil~al~~lH~~~i~  164 (521)
                      +.+     +||||+++++++...+..|+||||++|++|.+++...       ..+++..+..++.|++.||.|||+++++
T Consensus        54 ~~l-----~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~  128 (269)
T cd05044          54 SNF-----NHPNIVKLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFI  128 (269)
T ss_pred             Hhc-----CCCCeeeEeeeecCCCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcc
Confidence            998     9999999999999999999999999999999998642       3478899999999999999999999999


Q ss_pred             eccCCCCcEEEeeCC--CCCCEEEeecCCCccCCCCC---CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh
Q 009980          165 HRDLKPENCLFLNDR--EDSPLKIMDFGLSSVEGYTD---PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS  239 (521)
Q Consensus       165 H~dlkp~Nil~~~~~--~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~  239 (521)
                      |+||||+||++..+.  ....++|+|||++.......   ......+++.|+|||.+.+..++.++|||||||++|+|++
T Consensus       129 H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt  208 (269)
T cd05044         129 HRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILT  208 (269)
T ss_pred             cCCCChheEEEecCCCCCCcceEECCcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHH
Confidence            999999999994322  22379999999987543221   1122345778999999998899999999999999999998


Q ss_pred             -CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          240 -GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       240 -g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                       |..||...+..+....+..+...   ..+..+|..+.+++.+||..+|.+|||+.++++
T Consensus       209 ~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  265 (269)
T cd05044         209 LGQQPYPALNNQEVLQHVTAGGRL---QKPENCPDKIYQLMTNCWAQDPSERPTFDRIQE  265 (269)
T ss_pred             cCCCCCcccCHHHHHHHHhcCCcc---CCcccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence             99999887776666665543321   122457899999999999999999999999875

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=6e-38  Score=303.79  Aligned_cols=252  Identities=23%  Similarity=0.307  Sum_probs=197.2

Q ss_pred             ccceeecccccccCceEEEEeEEc--cCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKK--TCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      ..+|++.+.||+|+||.||+|..+  ...++..||+|.+.....                            .....+.+
T Consensus         3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~----------------------------~~~~~~~~   54 (284)
T cd05081           3 ERHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTA----------------------------EHLRDFER   54 (284)
T ss_pred             cccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCH----------------------------HHHHHHHH
Confidence            358999999999999999999853  223678899999854211                            12345788


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEe--CCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYED--QNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQANI  163 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~--~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~~~i  163 (521)
                      |+.+++++     +||||+++++++..  ...+++||||++|++|.+++... ..+++..+..++.|++.||.|||++||
T Consensus        55 e~~~l~~l-----~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i  129 (284)
T cd05081          55 EIEILKSL-----QHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRY  129 (284)
T ss_pred             HHHHHHhC-----CCCCeeEEEEEEccCCCCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            99999998     99999999998643  35789999999999999998764 468999999999999999999999999


Q ss_pred             eeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCc----ccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh
Q 009980          164 VHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPV----VGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS  239 (521)
Q Consensus       164 ~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~  239 (521)
                      +||||||+||++   +.++.++|+|||++.........    ....++..|+|||.+.+..++.++||||+||++|+|++
T Consensus       130 ~H~dlkp~nili---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~  206 (284)
T cd05081         130 VHRDLATRNILV---ESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT  206 (284)
T ss_pred             eeccCCHhhEEE---CCCCeEEECCCcccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhh
Confidence            999999999999   67788999999999865332211    11123456999999988889999999999999999999


Q ss_pred             CCCCCCCCCcHHH---------------HHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          240 GYPPFIAQSNRQK---------------QQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       240 g~~pf~~~~~~~~---------------~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      |..|+........               ...+......++  ....++.++.+|+.+||..+|++|||+.+++.
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05081         207 YSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLP--APPGCPAEIYAIMKECWNNDPSQRPSFSELAL  278 (284)
T ss_pred             cCCcCCCcchhhhhhcccccccccchHHHHHHHhcCCcCC--CCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            8877643322110               001111111111  12457899999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=3.1e-38  Score=303.88  Aligned_cols=242  Identities=21%  Similarity=0.270  Sum_probs=189.2

Q ss_pred             cccccCceEEEEeEEccC----------------------CCcceEEEEEeecCCCCCCCCCCCCCCCCCCCcccccccc
Q 009980           17 ILGRGGFSVVRRGIKKTC----------------------GETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTR   74 (521)
Q Consensus        17 ~lG~G~~g~V~~a~~~~~----------------------~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (521)
                      .||+|+||.||+|.....                      +....||+|++.....                        
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~------------------------   57 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHR------------------------   57 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHH------------------------
Confidence            699999999999985421                      1224578888743211                        


Q ss_pred             ccccccHHHHHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHH
Q 009980           75 KQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAE  153 (521)
Q Consensus        75 ~~~~~~~~~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~  153 (521)
                          .....+.+|+.+++++     +||||+++++++.++...|+||||++||+|..++.. .+.+++..+..++.||+.
T Consensus        58 ----~~~~~~~~~~~~~~~l-----~h~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~  128 (274)
T cd05076          58 ----DIALAFFETASLMSQV-----SHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLAS  128 (274)
T ss_pred             ----HHHHHHHHHHHHHhcC-----CCCCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence                1123466778888877     999999999999999999999999999999888865 467899999999999999


Q ss_pred             HHHHHHHCCCeeccCCCCcEEEeeC----CCCCCEEEeecCCCccCCCCCCcccccCCccccccccccc-CCCCchhhhH
Q 009980          154 GLAALHQANIVHRDLKPENCLFLND----REDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQ-DRITSKSDMW  228 (521)
Q Consensus       154 al~~lH~~~i~H~dlkp~Nil~~~~----~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Diw  228 (521)
                      ||.|||++||+||||||+||++...    .....+|++|||++......   ....+++.|+|||.+.+ ..++.++|||
T Consensus       129 ~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~---~~~~~~~~~~aPe~~~~~~~~~~~~Dv~  205 (274)
T cd05076         129 ALSYLEDKNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSR---EERVERIPWIAPECVPGGNSLSTAADKW  205 (274)
T ss_pred             HHHHHHcCCccCCCCCcccEEEeccCcccCccceeeecCCccccccccc---cccccCCcccCchhhcCCCCCCcHHHHH
Confidence            9999999999999999999999532    12335899999988643221   22357888999998865 5689999999


Q ss_pred             HHHHHHHHHH-hCCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          229 SLGVILYILL-SGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       229 slG~il~~ll-~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      ||||++|+|+ +|.+||......+...... .....+    ...++.+.++|.+||..+|++|||+.+++++
T Consensus       206 slG~~l~el~~~g~~p~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~li~~cl~~~p~~Rps~~~il~~  272 (274)
T cd05076         206 SFGTTLLEICFDGEVPLKERTPSEKERFYE-KKHRLP----EPSCKELATLISQCLTYEPTQRPSFRTILRD  272 (274)
T ss_pred             HHHHHHHHHHhCCCCCccccChHHHHHHHH-hccCCC----CCCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence            9999999984 7999998776555433322 222222    2346789999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=7.8e-40  Score=307.39  Aligned_cols=270  Identities=31%  Similarity=0.472  Sum_probs=218.3

Q ss_pred             ccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHH
Q 009980            5 TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALL   84 (521)
Q Consensus         5 ~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (521)
                      -..+.++|-++.+||+|||+.||+|.+..  .+++||||+-.......                    ..+. .-..+..
T Consensus       458 HptLn~RYLlLhLLGrGGFSEVyKAFDl~--EqRYvAvKIHqlNK~Wr--------------------dEKK-eNYhKHA  514 (775)
T KOG1151|consen  458 HPTLNDRYLLLHLLGRGGFSEVYKAFDLT--EQRYVAVKIHQLNKNWR--------------------DEKK-ENYHKHA  514 (775)
T ss_pred             CcchHHHHHHHHHhccccHHHHHHhcccc--hhheeeEeeehhccchh--------------------hHhh-hhHHHHH
Confidence            34678899999999999999999999988  88999999954332211                    1110 1122345


Q ss_pred             HHHHHHHHHHhhccCCCCCccceeEEEE-eCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--
Q 009980           85 TNEILVMRKIVENVSPHPNVIDLYDVYE-DQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQA--  161 (521)
Q Consensus        85 ~~E~~~l~~l~~~~~~hpniv~~~~~~~-~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~--  161 (521)
                      .+|.++.+.|     +||.||++|++|. +.+.+|-|+|||+|.+|-=++..+..++|.+++.|+-||+.||.||...  
T Consensus       515 cREyrIHKeL-----DHpRIVKlYDyfslDtdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikp  589 (775)
T KOG1151|consen  515 CREYRIHKEL-----DHPRIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKP  589 (775)
T ss_pred             HHHHhhhhcc-----CcceeeeeeeeeeeccccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCC
Confidence            6788888888     9999999999996 4567899999999999988888889999999999999999999999977  


Q ss_pred             CCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC--------cccccCCcccccccccccC----CCCchhhhHH
Q 009980          162 NIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP--------VVGLFGSIDYVSPEALLQD----RITSKSDMWS  229 (521)
Q Consensus       162 ~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~--------~~~~~gt~~y~aPE~~~~~----~~~~~~Diws  229 (521)
                      .|+|-||||.|||+.+...-|.+||+|||+++.......        .....||.+|+|||.+.-+    +.+.++||||
T Consensus       590 PIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWS  669 (775)
T KOG1151|consen  590 PIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWS  669 (775)
T ss_pred             CeeeeccCCccEEEecCcccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEe
Confidence            599999999999998877788999999999987643221        1234699999999998744    3577999999


Q ss_pred             HHHHHHHHHhCCCCCCCCCcH-HHHH--HH-HcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccC
Q 009980          230 LGVILYILLSGYPPFIAQSNR-QKQQ--MI-MAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIG  304 (521)
Q Consensus       230 lG~il~~ll~g~~pf~~~~~~-~~~~--~i-~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~  304 (521)
                      +|||+|.++.|+.||...... .+++  .| ......||..  +-+|+++++||++||++--+.|..+.++..||||..
T Consensus       670 vGVIFyQClYGrKPFGhnqsQQdILqeNTIlkAtEVqFP~K--PvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllP  746 (775)
T KOG1151|consen  670 VGVIFYQCLYGRKPFGHNQSQQDILQENTILKATEVQFPPK--PVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLP  746 (775)
T ss_pred             eehhhhhhhccCCCCCCchhHHHHHhhhchhcceeccCCCC--CccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccc
Confidence            999999999999999654332 2222  12 2334455544  458999999999999999999999999999999964

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=100.00  E-value=5.9e-38  Score=301.98  Aligned_cols=250  Identities=25%  Similarity=0.373  Sum_probs=202.0

Q ss_pred             eeecccccccCceEEEEeEEcc-CCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHH
Q 009980           12 YEVTDILGRGGFSVVRRGIKKT-CGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILV   90 (521)
Q Consensus        12 Y~~~~~lG~G~~g~V~~a~~~~-~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   90 (521)
                      |++.+.||+|+||.||+|..+. .++++.||||++.......                          .....+.+|+.+
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~--------------------------~~~~~~~~E~~~   54 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSS--------------------------SDIEEFLREAAC   54 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCCh--------------------------HHHHHHHHHHHH
Confidence            6788999999999999998764 2367899999986432111                          123457789999


Q ss_pred             HHHHhhccCCCCCccceeEEEEeCC------eEEEEEeccCCCchHHHHHhc------CCCCHHHHHHHHHHHHHHHHHH
Q 009980           91 MRKIVENVSPHPNVIDLYDVYEDQN------GVHLILELCSGGELFDRIVAQ------ERYMEVGAAAVIRQIAEGLAAL  158 (521)
Q Consensus        91 l~~l~~~~~~hpniv~~~~~~~~~~------~~~lv~e~~~gg~L~~~l~~~------~~~~~~~~~~i~~qil~al~~l  158 (521)
                      ++++     +||||+++++++....      ..++++||+.+|+|.+++...      ..++...+..++.|++.||.||
T Consensus        55 l~~l-----~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~l  129 (273)
T cd05074          55 MKEF-----DHPNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYL  129 (273)
T ss_pred             HhcC-----CCCCcceEEEEEccCCCCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9998     9999999999886542      347899999999998877532      2478899999999999999999


Q ss_pred             HHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC---cccccCCcccccccccccCCCCchhhhHHHHHHHH
Q 009980          159 HQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY  235 (521)
Q Consensus       159 H~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~  235 (521)
                      |++||+||||||+||++   +.++.+||+|||+++.......   .....+++.|++||.+....++.++|||||||++|
T Consensus       130 H~~~i~H~dikp~nili---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~  206 (273)
T cd05074         130 SSKNFIHRDLAARNCML---NENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMW  206 (273)
T ss_pred             HhCCEeecccchhhEEE---cCCCCEEECcccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHH
Confidence            99999999999999999   6778899999999986432221   12223567899999998888999999999999999


Q ss_pred             HHHh-CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          236 ILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       236 ~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      +|++ |.+||.+.+..+....+..+.....   ....++.+.+++.+||..+|++|||+.+++.
T Consensus       207 el~~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~  267 (273)
T cd05074         207 EIMTRGQTPYAGVENSEIYNYLIKGNRLKQ---PPDCLEDVYELMCQCWSPEPKCRPSFQHLRD  267 (273)
T ss_pred             HHhhCCCCCCCCCCHHHHHHHHHcCCcCCC---CCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            9999 9999988777766666665432211   1357889999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=100.00  E-value=7e-38  Score=326.62  Aligned_cols=258  Identities=20%  Similarity=0.282  Sum_probs=176.7

Q ss_pred             cccceeecccccccCceEEEEeEEccCCC----cceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCGE----TNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDAL   83 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~----~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (521)
                      -.++|++.+.||+|+||.||+|++..  +    +..||||.+.....                                 
T Consensus       130 ~~~~y~l~~~LG~G~FG~VYka~~~~--~~~~~~~~vAvK~~~~~~~---------------------------------  174 (566)
T PLN03225        130 KKDDFVLGKKLGEGAFGVVYKASLVN--KQSKKEGKYVLKKATEYGA---------------------------------  174 (566)
T ss_pred             ccCCeEEeEEEeeCCCeEEEEEEEcC--CccccCcEEEEEEecccch---------------------------------
Confidence            46799999999999999999999987  6    78899998753110                                 


Q ss_pred             HHHHHHHHHHHhhccCCCCCccceeEE------EEeCCeEEEEEeccCCCchHHHHHhcCC-------------------
Q 009980           84 LTNEILVMRKIVENVSPHPNVIDLYDV------YEDQNGVHLILELCSGGELFDRIVAQER-------------------  138 (521)
Q Consensus        84 ~~~E~~~l~~l~~~~~~hpniv~~~~~------~~~~~~~~lv~e~~~gg~L~~~l~~~~~-------------------  138 (521)
                        .|+.+..++...  .+.++..+...      ......+++||||+.+++|.+++.....                   
T Consensus       175 --~e~~~~e~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~  250 (566)
T PLN03225        175 --VEIWMNERVRRA--CPNSCADFVYGFLEPVSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGL  250 (566)
T ss_pred             --hHHHHHHHHHhh--chhhHHHHHHhhhcccccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccc
Confidence              111111111000  22233222222      2456679999999999999998865321                   


Q ss_pred             -CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCC--CCcccccCCcccccccc
Q 009980          139 -YMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYT--DPVVGLFGSIDYVSPEA  215 (521)
Q Consensus       139 -~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~gt~~y~aPE~  215 (521)
                       ..+..+..++.||+.||.|||++||+||||||+|||+.  ...+.+||+|||+|+.....  ......+||+.|+|||.
T Consensus       251 ~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NILl~--~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~  328 (566)
T PLN03225        251 ERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQNIIFS--EGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQ  328 (566)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHEEEe--CCCCcEEEEeCCCccccccccccCCcccccCCCccChHH
Confidence             12345678999999999999999999999999999992  23578999999999754322  22344578999999997


Q ss_pred             cccC----------------------CCCchhhhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHcCCCCCc---------
Q 009980          216 LLQD----------------------RITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFY---------  264 (521)
Q Consensus       216 ~~~~----------------------~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~---------  264 (521)
                      +...                      .++.++||||+||++|+|+++..|+... .......+........         
T Consensus       329 ~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~  407 (566)
T PLN03225        329 YIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSDSN-LIQFNRQLKRNDYDLVAWRKLVEPR  407 (566)
T ss_pred             hhccCCCCCCccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCCCchH-HHHHHHHHHhcCCcHHHHHHhhccc
Confidence            6422                      2344679999999999999977664321 1111111211111100         


Q ss_pred             --h------hhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCCC
Q 009980          265 --E------QTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSA  307 (521)
Q Consensus       265 --~------~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~~  307 (521)
                        .      ..+...+...++||.+||+.||.+|||+.++|+||||.+...
T Consensus       408 ~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~Hpff~~~~~  458 (566)
T PLN03225        408 ASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRISAKAALAHPYFDREGL  458 (566)
T ss_pred             cchhhhhhhhhccccchHHHHHHHHHccCCcccCCCHHHHhCCcCcCCCCc
Confidence              0      001112334569999999999999999999999999987544

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=7.5e-38  Score=298.76  Aligned_cols=240  Identities=21%  Similarity=0.289  Sum_probs=189.6

Q ss_pred             ccccccCceEEEEeEEccCCC--------cceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980           16 DILGRGGFSVVRRGIKKTCGE--------TNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus        16 ~~lG~G~~g~V~~a~~~~~~~--------~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      +.||+|+||.||+|.++..+.        ...+++|++....                             .....+.+|
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~-----------------------------~~~~~~~~e   51 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDH-----------------------------RDSLAFFET   51 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccch-----------------------------hhHHHHHHH
Confidence            469999999999999986221        1347777654211                             013457889


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE-RYMEVGAAAVIRQIAEGLAALHQANIVHR  166 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qil~al~~lH~~~i~H~  166 (521)
                      +.+++++     +||||+++++++.. ...++||||+.+|+|.+++...+ .++...+..++.||+.||.|||++||+||
T Consensus        52 ~~~l~~l-----~h~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~  125 (259)
T cd05037          52 ASLMSQL-----SHKHLVKLYGVCVR-DENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHG  125 (259)
T ss_pred             HHHHHcC-----CCcchhheeeEEec-CCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecc
Confidence            9999988     99999999999988 77899999999999999998766 78999999999999999999999999999


Q ss_pred             cCCCCcEEEeeCC----CCCCEEEeecCCCccCCCCCCcccccCCcccccccccccC--CCCchhhhHHHHHHHHHHHh-
Q 009980          167 DLKPENCLFLNDR----EDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQD--RITSKSDMWSLGVILYILLS-  239 (521)
Q Consensus       167 dlkp~Nil~~~~~----~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~~ll~-  239 (521)
                      ||||+||++..+.    ....+||+|||++.....   .....+++.|+|||.+.+.  .++.++||||+|+++|+|++ 
T Consensus       126 dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~  202 (259)
T cd05037         126 NVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLS---REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSN  202 (259)
T ss_pred             cCccceEEEecCccccCCceeEEeCCCCccccccc---ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhC
Confidence            9999999994322    112799999999986543   2233467789999999876  78999999999999999999 


Q ss_pred             CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          240 GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       240 g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      |..||...+..+......... ..+    ...+..+.+++.+||..+|.+|||+.++++
T Consensus       203 ~~~p~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  256 (259)
T cd05037         203 GEEPLSTLSSSEKERFYQDQH-RLP----MPDCAELANLINQCWTYDPTKRPSFRAILR  256 (259)
T ss_pred             CCCCcccCCchhHHHHHhcCC-CCC----CCCchHHHHHHHHHhccChhhCCCHHHHHH
Confidence            688887765444333332211 111    112378999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=100.00  E-value=1.5e-37  Score=298.39  Aligned_cols=247  Identities=21%  Similarity=0.331  Sum_probs=191.7

Q ss_pred             ccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHHh
Q 009980           16 DILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIV   95 (521)
Q Consensus        16 ~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~   95 (521)
                      +.||+|+||.||+|.....+....+++|.+.....                           ......+.+|+.+++.+ 
T Consensus         1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~---------------------------~~~~~~~~~e~~~~~~l-   52 (268)
T cd05086           1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANAS---------------------------SKEQNEFLQQGDPYRIL-   52 (268)
T ss_pred             CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCC---------------------------hHHHHHHHHHHHHHhcc-
Confidence            36999999999999865433344566776643211                           01234578888888888 


Q ss_pred             hccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCC
Q 009980           96 ENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ----ERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPE  171 (521)
Q Consensus        96 ~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~----~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~  171 (521)
                          +||||+++++.+.+....|+||||+++|+|.+++...    ...++..+..++.||+.||.|||+++++||||||+
T Consensus        53 ----~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~  128 (268)
T cd05086          53 ----QHPNILQCLGQCVEAIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALR  128 (268)
T ss_pred             ----CCcchhheEEEecCCCccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccc
Confidence                9999999999999999999999999999999998754    34567778899999999999999999999999999


Q ss_pred             cEEEeeCCCCCCEEEeecCCCccCCCC---CCcccccCCccccccccccc-------CCCCchhhhHHHHHHHHHHHh-C
Q 009980          172 NCLFLNDREDSPLKIMDFGLSSVEGYT---DPVVGLFGSIDYVSPEALLQ-------DRITSKSDMWSLGVILYILLS-G  240 (521)
Q Consensus       172 Nil~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DiwslG~il~~ll~-g  240 (521)
                      |||+   +.++.++|+|||++......   ......+|++.|+|||++..       ..++.++||||+||++|+|++ |
T Consensus       129 nil~---~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~  205 (268)
T cd05086         129 NCFL---TSDLTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENA  205 (268)
T ss_pred             eEEE---cCCccEEecccccccccCcchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCC
Confidence            9999   67788999999998642211   11234568889999998753       245778999999999999997 5


Q ss_pred             CCCCCCCCcHHHHHHHHcCC-CCCch-hhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          241 YPPFIAQSNRQKQQMIMAGE-FSFYE-QTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       241 ~~pf~~~~~~~~~~~i~~~~-~~~~~-~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      .+||...+..+....+..+. ..... .....+++.+.+++..|+ .+|++|||+.++++
T Consensus       206 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~  264 (268)
T cd05086         206 AQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHR  264 (268)
T ss_pred             CCCCCCCCHHHHHHHHHhhcccccCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence            78888777766666554432 22221 122347889999999999 68999999999975

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=100.00  E-value=3e-39  Score=308.93  Aligned_cols=266  Identities=24%  Similarity=0.374  Sum_probs=220.7

Q ss_pred             cccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHH
Q 009980            4 ETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDAL   83 (521)
Q Consensus         4 ~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (521)
                      .++.+..+|.+....|+|-||+|.+|.+..  .++.||||+|.....                             ..+.
T Consensus       426 igE~LD~RY~V~~~~GkGvFs~Vvra~D~~--r~~~vAiKIIRnNE~-----------------------------M~Kt  474 (752)
T KOG0670|consen  426 IGELLDSRYEVQGYTGKGVFSTVVRARDQA--RGQEVAIKIIRNNEV-----------------------------MHKT  474 (752)
T ss_pred             hhhhhcceeEEEeccccceeeeeeeccccC--CCCeeEEEEeecchH-----------------------------Hhhh
Confidence            467788999999999999999999999988  677999999975422                             2344


Q ss_pred             HHHHHHHHHHHhhccC-CCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH
Q 009980           84 LTNEILVMRKIVENVS-PHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE---RYMEVGAAAVIRQIAEGLAALH  159 (521)
Q Consensus        84 ~~~E~~~l~~l~~~~~-~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~---~~~~~~~~~i~~qil~al~~lH  159 (521)
                      -+.|+++|++|..+-. +--|+++++-.|...+++|||+|.+. .+|.+.+.+.+   .+....++.++.|++.||..|-
T Consensus       475 Gl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLClVFE~Ls-lNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK  553 (752)
T KOG0670|consen  475 GLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLCLVFEPLS-LNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLK  553 (752)
T ss_pred             hhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeEEEehhhh-chHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHH
Confidence            5789999999954322 33589999999999999999999985 48999998765   4888999999999999999999


Q ss_pred             HCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh
Q 009980          160 QANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS  239 (521)
Q Consensus       160 ~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~  239 (521)
                      ..||+|.||||+|||+  ......+||||||.|...+.. ..+++..+..|.|||++.+-+|+...|+||+||+||||.|
T Consensus       554 ~c~vlHaDIKPDNiLV--NE~k~iLKLCDfGSA~~~~en-eitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYt  630 (752)
T KOG0670|consen  554 KCGVLHADIKPDNILV--NESKNILKLCDFGSASFASEN-EITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYT  630 (752)
T ss_pred             hcCeeecccCccceEe--ccCcceeeeccCccccccccc-cccHHHHHHhccCcceeecCcccCCccceeeceeeEEeec
Confidence            9999999999999999  345678999999999877644 3445556778999999999999999999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHHcCCCCCchhhh-------------------------------------------------hc
Q 009980          240 GYPPFIAQSNRQKQQMIMAGEFSFYEQTW-------------------------------------------------KN  270 (521)
Q Consensus       240 g~~pf~~~~~~~~~~~i~~~~~~~~~~~~-------------------------------------------------~~  270 (521)
                      |+..|.+.++..++...+.-...+|....                                                 +.
T Consensus       631 GkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~  710 (752)
T KOG0670|consen  631 GKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQR  710 (752)
T ss_pred             cceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCC
Confidence            99999999998887765543333332111                                                 00


Q ss_pred             c-------CHHHHHHHHHhccCCCCCCCCHHHHHcCCcccC
Q 009980          271 I-------SSSAKQLISSLLTVDPNRRPSAQELLNHPWVIG  304 (521)
Q Consensus       271 ~-------s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~  304 (521)
                      +       -..+++|+.+||..||++|.|+.++|.||||+.
T Consensus       711 ~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~HpFi~~  751 (752)
T KOG0670|consen  711 LPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKHPFITE  751 (752)
T ss_pred             CCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcCCcccC
Confidence            1       134789999999999999999999999999964

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=4e-38  Score=319.06  Aligned_cols=259  Identities=29%  Similarity=0.487  Sum_probs=216.8

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      .-.+-|+|.++||.|.||.||+++++.  +++..|+|++....                             ..+..++.
T Consensus        16 dp~d~~ei~evig~Gtygkv~k~k~~~--~~~~aa~kI~~~~~-----------------------------d~deEiE~   64 (953)
T KOG0587|consen   16 DPADIFEIIEVIGNGTYGKVYKGRHVK--TGQLAAIKIMDPTE-----------------------------DEEEEIEL   64 (953)
T ss_pred             CCCCccEEEEEEeeccceeEEEEeeee--cCceeeeEeecCCc-----------------------------cccHHHHH
Confidence            446789999999999999999999999  77889999975422                             12334667


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEE-----eCCeEEEEEeccCCCchHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYE-----DQNGVHLILELCSGGELFDRIVA--QERYMEVGAAAVIRQIAEGLAALH  159 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~-----~~~~~~lv~e~~~gg~L~~~l~~--~~~~~~~~~~~i~~qil~al~~lH  159 (521)
                      |.++++.+    ++|||++.++++|.     .++.+|||||||.|||..|++..  ..++.|..++.|++.+|.|+.+||
T Consensus        65 eynil~~~----~~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH  140 (953)
T KOG0587|consen   65 EYNMLKKY----SHHPNVATFYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLH  140 (953)
T ss_pred             HHHHHHhc----cCCCCcceEEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHh
Confidence            77777766    69999999999985     35789999999999999999875  457889999999999999999999


Q ss_pred             HCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC-CcccccCCcccccccccccC-----CCCchhhhHHHHHH
Q 009980          160 QANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALLQD-----RITSKSDMWSLGVI  233 (521)
Q Consensus       160 ~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~-----~~~~~~DiwslG~i  233 (521)
                      .+.++|||||-.|||+   ..++.|||+|||.+....... ...+.+|||+|||||++...     .|+..+|+||||++
T Consensus       141 ~nkviHRDikG~NiLL---T~e~~VKLvDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGIT  217 (953)
T KOG0587|consen  141 NNKVIHRDIKGQNVLL---TENAEVKLVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGIT  217 (953)
T ss_pred             hcceeeecccCceEEE---eccCcEEEeeeeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccce
Confidence            9999999999999999   788999999999997655432 34566899999999999743     47789999999999


Q ss_pred             HHHHHhCCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccC
Q 009980          234 LYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIG  304 (521)
Q Consensus       234 l~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~  304 (521)
                      ..||.-|.||+.+..+...+-.|.+.. ++....|+..++++.+||..||.+|-.+||+..++|.|||+..
T Consensus       218 aIEladG~PPl~DmHPmraLF~IpRNP-PPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e  287 (953)
T KOG0587|consen  218 AIEMAEGAPPLCDMHPMRALFLIPRNP-PPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFITE  287 (953)
T ss_pred             eehhcCCCCCccCcchhhhhccCCCCC-CccccchhhHHHHHHHHHHHHHhhccccCcchhhhccCCcccc
Confidence            999999999998776655544443332 2223346778999999999999999999999999999999983

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=2e-37  Score=300.06  Aligned_cols=253  Identities=25%  Similarity=0.328  Sum_probs=202.1

Q ss_pred             ccceeecccccccCceEEEEeEEcc--CCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKT--CGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~--~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      .++|++.+.||+|+||.||+|+...  .+++..||||++......                           .....+.+
T Consensus         3 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~---------------------------~~~~~~~~   55 (284)
T cd05038           3 KRHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE---------------------------QHRSDFER   55 (284)
T ss_pred             hhhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch---------------------------HHHHHHHH
Confidence            3578899999999999999998653  235788999998643210                           12346889


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEe--CCeEEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCC
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYED--QNGVHLILELCSGGELFDRIVAQE-RYMEVGAAAVIRQIAEGLAALHQANI  163 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~--~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qil~al~~lH~~~i  163 (521)
                      |+.+++.+     .||||+++++++..  ....++||||+++++|.+++.... .+++..+..++.|++.||.|||++|+
T Consensus        56 ei~~l~~l-----~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i  130 (284)
T cd05038          56 EIEILRTL-----DHENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRY  130 (284)
T ss_pred             HHHHHHhC-----CCCChheEEeeeecCCCCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            99999998     99999999999887  568999999999999999997654 58999999999999999999999999


Q ss_pred             eeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCc----ccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh
Q 009980          164 VHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPV----VGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS  239 (521)
Q Consensus       164 ~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~  239 (521)
                      +|+||||+||++   +.++.++|+|||.+.........    ....++..|+|||.+.+..++.++||||+|+++|+|++
T Consensus       131 ~H~dl~p~nil~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~t  207 (284)
T cd05038         131 IHRDLAARNILV---ESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFT  207 (284)
T ss_pred             ecCCCCHHhEEE---cCCCCEEEcccccccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeec
Confidence            999999999999   67789999999999865422111    11234567999999988889999999999999999999


Q ss_pred             CCCCCCCCCcHH--------------HHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          240 GYPPFIAQSNRQ--------------KQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       240 g~~pf~~~~~~~--------------~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      |..|+.......              ............+  ....++.++.+++.+||..+|.+|||+.+++.
T Consensus       208 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05038         208 YGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLP--RPPSCPDEVYDLMKLCWEAEPQDRPSFADLIL  278 (284)
T ss_pred             cCCCcccccchhccccccccccccHHHHHHHHHcCCcCC--CCccCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence            999986543221              1111122222221  12456789999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.8e-37  Score=305.00  Aligned_cols=252  Identities=25%  Similarity=0.436  Sum_probs=198.7

Q ss_pred             cccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      ..++|.-...||+|+||.||+|....   +..||||.+......                           . ...+.+|
T Consensus        73 AT~~Fs~~~~ig~Ggfg~VYkG~l~~---~~~vAVK~~~~~~~~---------------------------~-~~eF~~E  121 (361)
T KOG1187|consen   73 ATNNFSESNLIGEGGFGTVYKGVLSD---GTVVAVKRLSSNSGQ---------------------------G-EREFLNE  121 (361)
T ss_pred             HHhCCchhcceecCCCeEEEEEEECC---CCEEEEEEecCCCCc---------------------------c-hhHHHHH
Confidence            34667777899999999999999874   488999977542211                           0 2349999


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEeCC-eEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC--
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYEDQN-GVHLILELCSGGELFDRIVAQE--RYMEVGAAAVIRQIAEGLAALHQAN--  162 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~~~-~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~al~~lH~~~--  162 (521)
                      +.++.++     +|||+|+++++|.+.+ ..+||+||++.|+|.+++....  .+++.....|+..++.||.|||...  
T Consensus       122 i~~ls~l-----~H~Nlv~LlGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~  196 (361)
T KOG1187|consen  122 VEILSRL-----RHPNLVKLLGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPP  196 (361)
T ss_pred             HHHHhcC-----CCcCcccEEEEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCC
Confidence            9999999     8999999999999998 5999999999999999998765  7899999999999999999999864  


Q ss_pred             -CeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCC-CCCcccc-cCCcccccccccccCCCCchhhhHHHHHHHHHHHh
Q 009980          163 -IVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGY-TDPVVGL-FGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS  239 (521)
Q Consensus       163 -i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~~-~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~  239 (521)
                       |+||||||+|||+   +.+...||+|||+|+.... ....... .||.+|+|||.+..+..+.++||||+||++.||+|
T Consensus       197 ~iiHrDiKssNILL---D~~~~aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElit  273 (361)
T KOG1187|consen  197 PIIHRDIKSSNILL---DEDFNAKLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELIT  273 (361)
T ss_pred             CEecCCCCHHHeeE---CCCCCEEccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHh
Confidence             9999999999999   8999999999999976543 3322333 79999999999988889999999999999999999


Q ss_pred             CCCCCCCCC---c---HHHH-HHHHcCCC-CCchhhh--hccC-----HHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          240 GYPPFIAQS---N---RQKQ-QMIMAGEF-SFYEQTW--KNIS-----SSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       240 g~~pf~~~~---~---~~~~-~~i~~~~~-~~~~~~~--~~~s-----~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      |+.|.....   .   .+.. ..+..+.. .+.++..  ...+     ..+..+..+|+..+|..||++.++++
T Consensus       274 gr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~  347 (361)
T KOG1187|consen  274 GRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVK  347 (361)
T ss_pred             CCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHH
Confidence            998876432   1   1111 11222211 1111111  1122     22557788999999999999999754

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-37  Score=327.40  Aligned_cols=251  Identities=29%  Similarity=0.449  Sum_probs=210.7

Q ss_pred             cceeecccccccCceEEEEeEEccCCC---cceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGE---TNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~---~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      ..-++.+.||+|+||.||.|.......   ...||||.+++...                           ......+.+
T Consensus       692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~---------------------------~~~~~~Fl~  744 (1025)
T KOG1095|consen  692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSS---------------------------EQEVSDFLK  744 (1025)
T ss_pred             hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCC---------------------------HHHHHHHHH
Confidence            455678899999999999999875321   23489998865322                           123456899


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHH
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-------ERYMEVGAAAVIRQIAEGLAALH  159 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-------~~~~~~~~~~i~~qil~al~~lH  159 (521)
                      |..+|+++     +|||||++++++-+....+|++|||.||+|..+|.+.       ..++..+...++.+|+.|+.||+
T Consensus       745 Ea~~m~~f-----~HpNiv~liGv~l~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe  819 (1025)
T KOG1095|consen  745 EALLMSKF-----DHPNIVSLIGVCLDSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLE  819 (1025)
T ss_pred             HHHHHhcC-----CCcceeeEEEeecCCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHH
Confidence            99999999     9999999999999999999999999999999999875       34889999999999999999999


Q ss_pred             HCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC---cccccCCcccccccccccCCCCchhhhHHHHHHHHH
Q 009980          160 QANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYI  236 (521)
Q Consensus       160 ~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~  236 (521)
                      ++++|||||...|+|+   +....+||+|||+|+..-..+-   .....-...|||||.+..+.++.++|||||||++||
T Consensus       820 ~~~fvHRDLAaRNCLL---~~~r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWE  896 (1025)
T KOG1095|consen  820 SKHFVHRDLAARNCLL---DERRVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWE  896 (1025)
T ss_pred             hCCCcCcchhhhheee---cccCcEEEcccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHH
Confidence            9999999999999999   6779999999999983211111   011112356999999999999999999999999999


Q ss_pred             HHh-CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          237 LLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       237 ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      ++| |..||.+.++.++......+. ..+  .+..+|..+.+++..||..+|++||++..+++
T Consensus       897 ifslG~~PY~~~~n~~v~~~~~~gg-RL~--~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~  956 (1025)
T KOG1095|consen  897 IFSLGATPYPSRSNFEVLLDVLEGG-RLD--PPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVE  956 (1025)
T ss_pred             HHhCCCCCCCCcchHHHHHHHHhCC-ccC--CCCCCChHHHHHHHHHccCChhhCccHHHHHh
Confidence            999 999999999999998666665 222  23679999999999999999999999999997

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=100.00  E-value=5.8e-39  Score=283.35  Aligned_cols=259  Identities=23%  Similarity=0.314  Sum_probs=208.3

Q ss_pred             eeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHH
Q 009980           12 YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVM   91 (521)
Q Consensus        12 Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l   91 (521)
                      .+-.+.||.|+||+|++-.++.  +|+..|||.++.....                           .+...+..|....
T Consensus        66 Lqdlg~iG~G~fG~V~KM~hk~--sg~~mAVKrIr~~n~~---------------------------keq~rll~e~d~~  116 (361)
T KOG1006|consen   66 LQDLGEIGNGAFGTVNKMLHKP--SGKLMAVKRIRSNNIE---------------------------KEQKRLLMEHDTV  116 (361)
T ss_pred             HHHHHHhcCCcchhhhhhhcCc--cCcEEEEEEeeeccch---------------------------HHHHHHHHHHHHH
Confidence            3345789999999999999998  8999999999754331                           2234566676665


Q ss_pred             HHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHH---H--HhcCCCCHHHHHHHHHHHHHHHHHHHHC-CCee
Q 009980           92 RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDR---I--VAQERYMEVGAAAVIRQIAEGLAALHQA-NIVH  165 (521)
Q Consensus        92 ~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~---l--~~~~~~~~~~~~~i~~qil~al~~lH~~-~i~H  165 (521)
                      .+-    .++||||++|+..-.++..||.||+|+- ||-.+   +  .+...++|.-...|....+.||.||... .|+|
T Consensus       117 mks----~~cp~IVkfyGa~F~EGdcWiCMELMd~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIH  191 (361)
T KOG1006|consen  117 MKS----SNCPNIVKFYGALFSEGDCWICMELMDI-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIH  191 (361)
T ss_pred             Hhh----cCCcHHHHHhhhhhcCCceeeeHHHHhh-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhh
Confidence            543    5999999999999999999999999954 55322   2  2456799999999999999999999765 8999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCccccccccccc--CCCCchhhhHHHHHHHHHHHhCCCC
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQ--DRITSKSDMWSLGVILYILLSGYPP  243 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~~ll~g~~p  243 (521)
                      ||+||+|||+   +..|.+||||||++.....+-..+.-.|-..|||||.+..  ..|+-++|+||||++|||+.||..|
T Consensus       192 RDvKPSNILl---dr~G~vKLCDFGIcGqLv~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fP  268 (361)
T KOG1006|consen  192 RDVKPSNILL---DRHGDVKLCDFGICGQLVDSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFP  268 (361)
T ss_pred             ccCChhheEE---ecCCCEeeecccchHhHHHHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCC
Confidence            9999999999   8899999999999986654444444467888999999963  3589999999999999999999999


Q ss_pred             CCCCC-cHHHHHHHHcCCCCCchhh--hhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCCC
Q 009980          244 FIAQS-NRQKQQMIMAGEFSFYEQT--WKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSA  307 (521)
Q Consensus       244 f~~~~-~~~~~~~i~~~~~~~~~~~--~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~~  307 (521)
                      +.+-+ .-+.+.++..|.++.....  .-++|..++.||..||.+|-+.||.+.+++++||+.....
T Consensus       269 yr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr~y~~  335 (361)
T KOG1006|consen  269 YRKWDSVFEQLCQVVIGDPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKFPFYRMYAV  335 (361)
T ss_pred             cchHHHHHHHHHHHHcCCCCeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhcCchhhhhhh
Confidence            97654 3455566677766543322  2348999999999999999999999999999999976543

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=100.00  E-value=3.1e-37  Score=300.85  Aligned_cols=245  Identities=28%  Similarity=0.402  Sum_probs=207.0

Q ss_pred             cccccccCceEEEEeEEccC--CCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHH
Q 009980           15 TDILGRGGFSVVRRGIKKTC--GETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMR   92 (521)
Q Consensus        15 ~~~lG~G~~g~V~~a~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   92 (521)
                      .+.||.|.||.||.|.....  +..-.||||..+......                           ....+..|..+|+
T Consensus       394 ~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d---------------------------~tekflqEa~iMr  446 (974)
T KOG4257|consen  394 KRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPD---------------------------DTEKFLQEASIMR  446 (974)
T ss_pred             HHhhcCCcccceeeeEecccccCcceeeeeehhccCCChh---------------------------hHHHHHHHHHHHH
Confidence            46799999999999987643  344569999987643321                           2456899999999


Q ss_pred             HHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCC
Q 009980           93 KIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPE  171 (521)
Q Consensus        93 ~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~  171 (521)
                      .+     +||||+++++++.+. ..|||||+++-|.|..++..+ .+++......++.||+.||.|||++.+|||||-..
T Consensus       447 nf-----dHphIikLIGv~~e~-P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaR  520 (974)
T KOG4257|consen  447 NF-----DHPHIIKLIGVCVEQ-PMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAAR  520 (974)
T ss_pred             hC-----CCcchhheeeeeecc-ceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhh
Confidence            99     999999999999754 589999999999999999865 46888899999999999999999999999999999


Q ss_pred             cEEEeeCCCCCCEEEeecCCCccCCCCCCcccccC--CcccccccccccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCC
Q 009980          172 NCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFG--SIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQS  248 (521)
Q Consensus       172 Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~g--t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~pf~~~~  248 (521)
                      |||+   .+...|||+|||+++......-.....|  +.-|||||.+....++.++|||-|||.+||++. |..||.+-.
T Consensus       521 NiLV---sSp~CVKLaDFGLSR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvk  597 (974)
T KOG4257|consen  521 NILV---SSPQCVKLADFGLSRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVK  597 (974)
T ss_pred             heee---cCcceeeecccchhhhccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCcccccc
Confidence            9999   6677899999999998765443333333  346999999999999999999999999999887 999999988


Q ss_pred             cHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          249 NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       249 ~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      +.+..-.+.+|...+   .++++|+.+..|+.+||..+|.+||++.++..
T Consensus       598 NsDVI~~iEnGeRlP---~P~nCPp~LYslmskcWayeP~kRPrftei~~  644 (974)
T KOG4257|consen  598 NSDVIGHIENGERLP---CPPNCPPALYSLMSKCWAYEPSKRPRFTEIKA  644 (974)
T ss_pred             ccceEEEecCCCCCC---CCCCCChHHHHHHHHHhccCcccCCcHHHHHH
Confidence            888777777776433   23679999999999999999999999887653

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-37  Score=282.30  Aligned_cols=259  Identities=28%  Similarity=0.419  Sum_probs=208.5

Q ss_pred             ccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHH
Q 009980            5 TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALL   84 (521)
Q Consensus         5 ~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (521)
                      .-.+..+|.-++.+|.|+- .|..|-+.-  .+++||+|.+......                          .......
T Consensus        12 ~ftv~~Ry~nL~p~~~g~~-~v~~a~D~v--~~~~v~ikk~~~pf~n--------------------------~~~akra   62 (369)
T KOG0665|consen   12 TFTVPKRYVNLKPIGSGAQ-IVVAAFDQV--LGRPVAIKKLSRPFQN--------------------------QTHAKRA   62 (369)
T ss_pred             ceeeeeeeeeecccCCCCc-eEEecchhh--ccCceehhhhcCcccc--------------------------Cccchhh
Confidence            3445678989999999998 788888887  7889999987542110                          1122345


Q ss_pred             HHHHHHHHHHhhccCCCCCccceeEEEEeC------CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 009980           85 TNEILVMRKIVENVSPHPNVIDLYDVYEDQ------NGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAAL  158 (521)
Q Consensus        85 ~~E~~~l~~l~~~~~~hpniv~~~~~~~~~------~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~l  158 (521)
                      .+|...+..+     .|+||++++.+|.-.      ..+|+|||++.. +|.+.+.  -.+.-..+..|+.|++.|++||
T Consensus        63 ~rel~l~~~v-----~~~nii~l~n~ftP~~~l~~~~e~y~v~e~m~~-nl~~vi~--~elDH~tis~i~yq~~~~ik~l  134 (369)
T KOG0665|consen   63 YRELKLMKCV-----NHKNIISLLNVFTPQKTLEEFQEVYLVMELMDA-NLCQVIL--MELDHETISYILYQMLCGIKHL  134 (369)
T ss_pred             hhhhhhhhhh-----cccceeeeeeccCccccHHHHHhHHHHHHhhhh-HHHHHHH--HhcchHHHHHHHHHHHHHHHHH
Confidence            7899999888     999999999999654      358999999966 8888777  3467788999999999999999


Q ss_pred             HHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHH
Q 009980          159 HQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILL  238 (521)
Q Consensus       159 H~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll  238 (521)
                      |+.||+||||||+||++   .....+||.|||+|+.....-..+..+.|.+|.|||++.+..|.+.+||||+||++.+|+
T Consensus       135 hs~~IihRdLkPsnivv---~~~~~lKi~dfg~ar~e~~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli  211 (369)
T KOG0665|consen  135 HSAGIIHRDLKPSNIVV---NSDCTLKILDFGLARTEDTDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELI  211 (369)
T ss_pred             HhcceeecccCccccee---cchhheeeccchhhcccCcccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHh
Confidence            99999999999999999   888999999999999876554567778999999999999999999999999999999999


Q ss_pred             hCCCCCCCCCcHHHHHHHHcCCCC-------------------------------Cchhhhh-------ccCHHHHHHHH
Q 009980          239 SGYPPFIAQSNRQKQQMIMAGEFS-------------------------------FYEQTWK-------NISSSAKQLIS  280 (521)
Q Consensus       239 ~g~~pf~~~~~~~~~~~i~~~~~~-------------------------------~~~~~~~-------~~s~~~~~li~  280 (521)
                      +|...|.|.+.-+...++......                               +++..|.       .-+..+++++.
T Consensus       212 ~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~  291 (369)
T KOG0665|consen  212 LGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLS  291 (369)
T ss_pred             hceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHH
Confidence            999999887654443333221111                               1111111       11345889999


Q ss_pred             HhccCCCCCCCCHHHHHcCCccc
Q 009980          281 SLLTVDPNRRPSAQELLNHPWVI  303 (521)
Q Consensus       281 ~~l~~dp~~R~t~~~~l~h~~~~  303 (521)
                      +||..||++|.|++++|+|||++
T Consensus       292 ~MLvi~pe~Risv~daL~HPY~~  314 (369)
T KOG0665|consen  292 KMLVIDPEKRISVDDALRHPYIK  314 (369)
T ss_pred             HhhccChhhcccHHHHhcCCeee
Confidence            99999999999999999999996

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.9e-36  Score=288.37  Aligned_cols=142  Identities=27%  Similarity=0.406  Sum_probs=119.3

Q ss_pred             cccccc-cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHH
Q 009980            4 ETRKLT-DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDA   82 (521)
Q Consensus         4 ~~~~~~-~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (521)
                      .+..|. .+|.+.++||.|-|++||+|.+..  ..+.||+|+.+....                             ...
T Consensus        71 IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq--~~r~VAlKVvKSAqh-----------------------------YtE  119 (590)
T KOG1290|consen   71 IGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQ--NKRYVALKVVKSAQH-----------------------------YTE  119 (590)
T ss_pred             ccccccCceEEEEEeccccccceeEEEeecc--CCeEEEEEEEehhhH-----------------------------HHH
Confidence            466778 899999999999999999999998  889999999864321                             123


Q ss_pred             HHHHHHHHHHHHhhccCCCC---CccceeEEEEe----CCeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHH
Q 009980           83 LLTNEILVMRKIVENVSPHP---NVIDLYDVYED----QNGVHLILELCSGGELFDRIVAQ--ERYMEVGAAAVIRQIAE  153 (521)
Q Consensus        83 ~~~~E~~~l~~l~~~~~~hp---niv~~~~~~~~----~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~  153 (521)
                      ....||.+|+++...-.+|+   +||+|++.|..    +.++|+|+|++ |.+|+.+|...  +.++...++.|++|||.
T Consensus       120 aAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~  198 (590)
T KOG1290|consen  120 AALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLT  198 (590)
T ss_pred             HHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHH
Confidence            46789999999855432344   69999999964    46899999999 77999999764  56999999999999999


Q ss_pred             HHHHHHHC-CCeeccCCCCcEEEee
Q 009980          154 GLAALHQA-NIVHRDLKPENCLFLN  177 (521)
Q Consensus       154 al~~lH~~-~i~H~dlkp~Nil~~~  177 (521)
                      ||.|||.+ ||+|.||||+|||++.
T Consensus       199 GLdYLH~ecgIIHTDlKPENvLl~~  223 (590)
T KOG1290|consen  199 GLDYLHRECGIIHTDLKPENVLLCS  223 (590)
T ss_pred             HHHHHHHhcCccccCCCcceeeeec
Confidence            99999976 9999999999999954

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=100.00  E-value=8.5e-36  Score=281.10  Aligned_cols=243  Identities=38%  Similarity=0.601  Sum_probs=206.7

Q ss_pred             CceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHHhhccCCC
Q 009980           22 GFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPH  101 (521)
Q Consensus        22 ~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~h  101 (521)
                      +||.||+|....  +++.+|+|++.......                           ....+.+|+..++++     +|
T Consensus         1 ~~g~v~~~~~~~--~~~~~~~k~~~~~~~~~---------------------------~~~~~~~e~~~~~~l-----~~   46 (244)
T smart00220        1 SFGKVYLARDKK--TGKLVAIKVIKKEKIKK---------------------------KRERILREISILKKL-----KH   46 (244)
T ss_pred             CceEEEEEEECC--CCcEEEEEEeccccccc---------------------------HHHHHHHHHHHHHhC-----CC
Confidence            589999999987  78899999986432210                           035688999999998     99


Q ss_pred             CCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEeeCCCC
Q 009980          102 PNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRED  181 (521)
Q Consensus       102 pniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~~~~~~~  181 (521)
                      |||+++++++......+++|||+.+++|.+++.....++...+..++.+++.++.|||+.|++|+||+|.||++   +.+
T Consensus        47 ~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~---~~~  123 (244)
T smart00220       47 PNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKKRGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILL---DED  123 (244)
T ss_pred             CcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEE---CCC
Confidence            99999999999999999999999999999999877668999999999999999999999999999999999999   667


Q ss_pred             CCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCC-CCcHHHHHHHHcCC
Q 009980          182 SPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIA-QSNRQKQQMIMAGE  260 (521)
Q Consensus       182 ~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~-~~~~~~~~~i~~~~  260 (521)
                      +.++|+|||.+.............+++.|+|||.+.+..++.++|+||+|+++|++++|..||.. .........+..+.
T Consensus       124 ~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~  203 (244)
T smart00220      124 GHVKLADFGLARQLDPGGLLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPK  203 (244)
T ss_pred             CcEEEccccceeeeccccccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccC
Confidence            89999999999876554444556789999999999888889999999999999999999999987 44455555555444


Q ss_pred             CCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcc
Q 009980          261 FSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV  302 (521)
Q Consensus       261 ~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~  302 (521)
                      ..... .+..++..+.+++.+||..+|++||++.++++||||
T Consensus       204 ~~~~~-~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~~~~  244 (244)
T smart00220      204 PPFPP-PEWKISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF  244 (244)
T ss_pred             CCCcc-ccccCCHHHHHHHHHHccCCchhccCHHHHhhCCCC
Confidence            43322 222278999999999999999999999999999997

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=100.00  E-value=5.1e-36  Score=304.78  Aligned_cols=280  Identities=22%  Similarity=0.278  Sum_probs=191.4

Q ss_pred             cccccceeecccccccCceEEEEeEEccC--------------CCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccc
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTC--------------GETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFF   71 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~--------------~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (521)
                      +.-.++|++.++||+|+||+||+|.....              ..++.||||.+.........              .+.
T Consensus       141 r~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~--------------~fl  206 (507)
T PLN03224        141 RWSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQ--------------DFL  206 (507)
T ss_pred             CccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHH--------------HHH
Confidence            34577999999999999999999975221              14467999998643211000              000


Q ss_pred             cccccccccHHHHHHHHHHHHHHhhccCCCCCccceeEEEEe--------CCeEEEEEeccCCCchHHHHHhcC------
Q 009980           72 PTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYED--------QNGVHLILELCSGGELFDRIVAQE------  137 (521)
Q Consensus        72 ~~~~~~~~~~~~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~--------~~~~~lv~e~~~gg~L~~~l~~~~------  137 (521)
                      ...............|+.++.++......|++++++++++..        .+..++||||+.+++|.+++....      
T Consensus       207 ~e~~~~~~~~e~~~vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~  286 (507)
T PLN03224        207 KTGTLAKGSAETGMVEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGC  286 (507)
T ss_pred             hhhhhhhcccchhHHHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcch
Confidence            000000011122445777777772211123344677777643        356899999999999998886321      


Q ss_pred             ------------------CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC
Q 009980          138 ------------------RYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD  199 (521)
Q Consensus       138 ------------------~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~  199 (521)
                                        .++...+..++.|++.||.|||+++|+||||||+||++   +.++.+||+|||++.......
T Consensus       287 L~e~l~~g~~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl---~~~~~~kL~DFGla~~~~~~~  363 (507)
T PLN03224        287 LEEFMMAGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLV---TVDGQVKIIDFGAAVDMCTGI  363 (507)
T ss_pred             HHHHHhcCCchhhhcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEE---CCCCcEEEEeCcCccccccCC
Confidence                              23456788899999999999999999999999999999   667889999999997543322


Q ss_pred             Cccc--ccCCcccccccccccCC--------------------CC--chhhhHHHHHHHHHHHhCCC-CCCCCCcH----
Q 009980          200 PVVG--LFGSIDYVSPEALLQDR--------------------IT--SKSDMWSLGVILYILLSGYP-PFIAQSNR----  250 (521)
Q Consensus       200 ~~~~--~~gt~~y~aPE~~~~~~--------------------~~--~~~DiwslG~il~~ll~g~~-pf~~~~~~----  250 (521)
                      ....  ..+|+.|+|||.+....                    |+  .+.|+||+||++|+|++|.. ||.+....    
T Consensus       364 ~~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~  443 (507)
T PLN03224        364 NFNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTEL  443 (507)
T ss_pred             ccCccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHH
Confidence            2222  23488999999886432                    12  24799999999999999876 76432111    


Q ss_pred             -------HHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCC---CCCCCHHHHHcCCcccC
Q 009980          251 -------QKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDP---NRRPSAQELLNHPWVIG  304 (521)
Q Consensus       251 -------~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp---~~R~t~~~~l~h~~~~~  304 (521)
                             ...+.+....+.+  ..|..+++.+++|+.+||..+|   .+|+|+.|+|+||||..
T Consensus       444 ~~~~~~~~~~r~~~~~~~~~--~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~  505 (507)
T PLN03224        444 RQYDNDLNRWRMYKGQKYDF--SLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLP  505 (507)
T ss_pred             hhccchHHHHHhhcccCCCc--ccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCC
Confidence                   1111122233333  3467789999999999999866   68999999999999964

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1e-36  Score=300.70  Aligned_cols=253  Identities=27%  Similarity=0.408  Sum_probs=213.7

Q ss_pred             cceeecccccccCceEEEEeEEccC-CCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTC-GETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEI   88 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   88 (521)
                      ++.++.+.||+|+||+|++|.++.. |+.-.||||+++......                           .-..|.+|+
T Consensus       110 e~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~---------------------------~mddflrEa  162 (1039)
T KOG0199|consen  110 EQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA---------------------------IMDDFLREA  162 (1039)
T ss_pred             HHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch---------------------------hHHHHHHHH
Confidence            3455678999999999999998763 344569999997533221                           234589999


Q ss_pred             HHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 009980           89 LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA--QERYMEVGAAAVIRQIAEGLAALHQANIVHR  166 (521)
Q Consensus        89 ~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~--~~~~~~~~~~~i~~qil~al~~lH~~~i~H~  166 (521)
                      .+|.+|     .|||++++|++..+ ..+-+|||++++|+|.+++.+  ...|.......++.||+.|+.||.++++|||
T Consensus       163 s~M~~L-----~H~hliRLyGvVl~-qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHR  236 (1039)
T KOG0199|consen  163 SHMLKL-----QHPHLIRLYGVVLD-QPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHR  236 (1039)
T ss_pred             HHHHhc-----cCcceeEEeeeecc-chhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhh
Confidence            999999     99999999999987 667899999999999999986  4568889999999999999999999999999


Q ss_pred             cCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccc----cCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CC
Q 009980          167 DLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGL----FGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GY  241 (521)
Q Consensus       167 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~----~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~  241 (521)
                      ||-..|+++   .....|||+|||+.+-..........    .-...|.|||.+....++.++|||++||++|||+| |.
T Consensus       237 DLAARNlll---asprtVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGE  313 (1039)
T KOG0199|consen  237 DLAARNLLL---ASPRTVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGE  313 (1039)
T ss_pred             hhhhhhhee---cccceeeeecccceeccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCC
Confidence            999999999   55678999999999876655443321    13456999999999999999999999999999999 89


Q ss_pred             CCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCc
Q 009980          242 PPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPW  301 (521)
Q Consensus       242 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~  301 (521)
                      .||.+....+++++|..+..-.   ..+.+|..+.+++..||..+|.+|||+..|...-+
T Consensus       314 ePW~G~~g~qIL~~iD~~erLp---RPk~csedIY~imk~cWah~paDRptFsair~~~~  370 (1039)
T KOG0199|consen  314 EPWVGCRGIQILKNIDAGERLP---RPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLV  370 (1039)
T ss_pred             CCCCCCCHHHHHHhccccccCC---CCCCChHHHHHHHHHhccCCccccccHHHHHHhHH
Confidence            9999999999999998665432   23668999999999999999999999999865433

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=100.00  E-value=2.9e-37  Score=311.40  Aligned_cols=249  Identities=36%  Similarity=0.526  Sum_probs=201.3

Q ss_pred             cccccccCceE-EEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHH
Q 009980           15 TDILGRGGFSV-VRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRK   93 (521)
Q Consensus        15 ~~~lG~G~~g~-V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~   93 (521)
                      .+++|.|+-|+ ||+|..    .++.||||.+-..                               ......+|+..|+.
T Consensus       514 ~eilG~Gs~Gt~Vf~G~y----e~R~VAVKrll~e-------------------------------~~~~A~rEi~lL~e  558 (903)
T KOG1027|consen  514 KEILGYGSNGTVVFRGVY----EGREVAVKRLLEE-------------------------------FFDFAQREIQLLQE  558 (903)
T ss_pred             HHHcccCCCCcEEEEEee----CCceehHHHHhhH-------------------------------hHHHHHHHHHHHHh
Confidence            46789999985 799988    5789999987431                               12346789988876


Q ss_pred             HhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHHCCCeeccCC
Q 009980           94 IVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQER----YMEVGAAAVIRQIAEGLAALHQANIVHRDLK  169 (521)
Q Consensus        94 l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~----~~~~~~~~i~~qil~al~~lH~~~i~H~dlk  169 (521)
                      -    ..|||||++|..=.++...||..|+|.. +|.+++...+.    ......+.++.|+++||++||+.+|||||||
T Consensus       559 S----D~H~NviRyyc~E~d~qF~YIalELC~~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLk  633 (903)
T KOG1027|consen  559 S----DEHPNVIRYYCSEQDRQFLYIALELCAC-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLK  633 (903)
T ss_pred             c----cCCCceEEEEeeccCCceEEEEehHhhh-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCC
Confidence            5    6999999999999999999999999966 99999987411    1114468889999999999999999999999


Q ss_pred             CCcEEEeeCC--CCCCEEEeecCCCccCCCCCC----cccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhC-CC
Q 009980          170 PENCLFLNDR--EDSPLKIMDFGLSSVEGYTDP----VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSG-YP  242 (521)
Q Consensus       170 p~Nil~~~~~--~~~~~kl~Dfg~a~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g-~~  242 (521)
                      |.|||+...+  ....++|+|||+|+.......    ..+..||-+|+|||++....-..++||+|+||++|+.++| .+
T Consensus       634 PQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~H  713 (903)
T KOG1027|consen  634 PQNILISVPSADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSH  713 (903)
T ss_pred             CceEEEEccCCCcceeEEecccccccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCcc
Confidence            9999996643  335689999999987654432    3455799999999999988888899999999999999885 99


Q ss_pred             CCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCC
Q 009980          243 PFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDS  306 (521)
Q Consensus       243 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~  306 (521)
                      ||...  .+...+|..+.+....-. +....++++||.+|+.++|..||+|.++|.||+|....
T Consensus       714 pFGd~--~~R~~NIl~~~~~L~~L~-~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW~~e  774 (903)
T KOG1027|consen  714 PFGDS--LERQANILTGNYTLVHLE-PLPDCEAKDLISRMLNPDPQLRPSATDVLNHPLFWDSE  774 (903)
T ss_pred             CCCch--HHhhhhhhcCccceeeec-cCchHHHHHHHHHhcCCCcccCCCHHHHhCCCccCChH
Confidence            99544  445567888877654321 11112899999999999999999999999999998654

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-37  Score=305.32  Aligned_cols=263  Identities=25%  Similarity=0.418  Sum_probs=226.8

Q ss_pred             ccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHH
Q 009980            5 TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALL   84 (521)
Q Consensus         5 ~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (521)
                      .++-.++|+....+|.|.||.||+|+++.  +++..|+|+++......                            -..+
T Consensus        10 rrnP~ddyellqrvgsgTygdvyKaRd~~--s~elaavkvVkLep~dd----------------------------~~~i   59 (829)
T KOG0576|consen   10 RRNPQDDYELLQRVGSGTYGDVYKARDKR--SGELAAVKVVKLEPGDD----------------------------FSGI   59 (829)
T ss_pred             hcCCccchhheeeecCCcccchhhhcccc--cCchhhheeeeccCCcc----------------------------cccc
Confidence            34778999999999999999999999998  88999999997644322                            2236


Q ss_pred             HHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 009980           85 TNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIV  164 (521)
Q Consensus        85 ~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~  164 (521)
                      +.|+-+++..     +|||||.+++.|......+|+||||.||+|.+.-.-.++++|.++...++..+.+|+|||++|=+
T Consensus        60 qqei~~~~dc-----~h~nivay~gsylr~dklwicMEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~  134 (829)
T KOG0576|consen   60 QQEIGMLRDC-----RHPNIVAYFGSYLRRDKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKI  134 (829)
T ss_pred             ccceeeeecC-----CCcChHHHHhhhhhhcCcEEEEEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcc
Confidence            7888888887     99999999999999999999999999999999888889999999999999999999999999999


Q ss_pred             eccCCCCcEEEeeCCCCCCEEEeecCCCccCCCC-CCcccccCCcccccccccc---cCCCCchhhhHHHHHHHHHHHhC
Q 009980          165 HRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYT-DPVVGLFGSIDYVSPEALL---QDRITSKSDMWSLGVILYILLSG  240 (521)
Q Consensus       165 H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~~ll~g  240 (521)
                      |||||-.||++   ...+.+|++|||.+...... ....+..|||+|||||+..   .+.|+..||+|++|++..++-.-
T Consensus       135 hRdiKGanill---td~gDvklaDfgvsaqitati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eL  211 (829)
T KOG0576|consen  135 HRDIKGANILL---TDEGDVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGEL  211 (829)
T ss_pred             cccccccceee---cccCceeecccCchhhhhhhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhc
Confidence            99999999999   77788999999998765432 2345678999999999864   56799999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHHcCCCCCchh-hhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCC
Q 009980          241 YPPFIAQSNRQKQQMIMAGEFSFYEQ-TWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGD  305 (521)
Q Consensus       241 ~~pf~~~~~~~~~~~i~~~~~~~~~~-~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~  305 (521)
                      ++|-....+........+..+.++.- .....++.+.+|++.+|.++|.+|||++.+|.|||+...
T Consensus       212 qpplfdlhpmr~l~LmTkS~~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~~  277 (829)
T KOG0576|consen  212 QPPLFDLHPMRALFLMTKSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQT  277 (829)
T ss_pred             CCcccccchHHHHHHhhccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhheeceeeccc
Confidence            99987777766666666666655432 223468899999999999999999999999999999765

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.5e-35  Score=288.72  Aligned_cols=242  Identities=28%  Similarity=0.431  Sum_probs=208.1

Q ss_pred             ecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHH
Q 009980           14 VTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRK   93 (521)
Q Consensus        14 ~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~   93 (521)
                      ...+||-|.||.||.+.+++  -.-.||||.++...                             ..-..|..|..+|+.
T Consensus       271 MkhKLGGGQYGeVYeGvWKk--yslTvAVKtLKEDt-----------------------------MeveEFLkEAAvMKe  319 (1157)
T KOG4278|consen  271 MKHKLGGGQYGEVYEGVWKK--YSLTVAVKTLKEDT-----------------------------MEVEEFLKEAAVMKE  319 (1157)
T ss_pred             eeeccCCCcccceeeeeeec--cceeeehhhhhhcc-----------------------------hhHHHHHHHHHHHHh
Confidence            34689999999999999998  55679999986432                             234568999999999


Q ss_pred             HhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCC
Q 009980           94 IVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE--RYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPE  171 (521)
Q Consensus        94 l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~  171 (521)
                      +     +|||+|+++++|..+..+|||+|||..|+|.+++.+..  .++......++.||.+|+.||..++++||||-..
T Consensus       320 i-----kHpNLVqLLGVCT~EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAAR  394 (1157)
T KOG4278|consen  320 I-----KHPNLVQLLGVCTHEPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAAR  394 (1157)
T ss_pred             h-----cCccHHHHhhhhccCCCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhh
Confidence            9     99999999999999999999999999999999998653  3666778888999999999999999999999999


Q ss_pred             cEEEeeCCCCCCEEEeecCCCccCCCCCCcccccC---CcccccccccccCCCCchhhhHHHHHHHHHHHh-CCCCCCCC
Q 009980          172 NCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFG---SIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQ  247 (521)
Q Consensus       172 Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~g---t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~pf~~~  247 (521)
                      |.|+   ..+..||++|||+++.+.. +..+...|   ..-|.|||.+..+.++.++|||+|||+|||+.| |-.||.+.
T Consensus       395 NCLV---gEnhiVKvADFGLsRlMtg-DTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGi  470 (1157)
T KOG4278|consen  395 NCLV---GENHIVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGI  470 (1157)
T ss_pred             hccc---cccceEEeeccchhhhhcC-CceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCc
Confidence            9999   8889999999999997642 22332223   456999999999999999999999999999998 89999999


Q ss_pred             CcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          248 SNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       248 ~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      +..+.+..+.++-   ....+.+|++.+.+|++.||+++|..||++.++-+
T Consensus       471 dlSqVY~LLEkgy---RM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHq  518 (1157)
T KOG4278|consen  471 DLSQVYGLLEKGY---RMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQ  518 (1157)
T ss_pred             cHHHHHHHHhccc---cccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHH
Confidence            8888887766652   33344789999999999999999999999998865

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.5e-37  Score=273.85  Aligned_cols=257  Identities=30%  Similarity=0.403  Sum_probs=209.0

Q ss_pred             ceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHH
Q 009980           11 EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILV   90 (521)
Q Consensus        11 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   90 (521)
                      +-+-.+.||.|+||+||.+.+.+  +++.||+|.+.....                          .-.+.+.+.+|+.+
T Consensus        54 Di~PDRPIGYGAFGVVWsVTDPR--dgrrvalkK~pnvfq--------------------------~L~s~krvFre~km  105 (449)
T KOG0664|consen   54 DIQPDRPIGYGAFGVVWSVTDPR--SGKRVALKKMPNVFQ--------------------------NLASCKRVFREIKM  105 (449)
T ss_pred             cCCCCCcccccceeEEEeccCCC--CccchhHhhcchHHH--------------------------HHHHHHHHHHHHHH
Confidence            34456899999999999999988  889999998864221                          12345668899999


Q ss_pred             HHHHhhccCCCCCccceeEEEEeCC-----eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           91 MRKIVENVSPHPNVIDLYDVYEDQN-----GVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        91 l~~l~~~~~~hpniv~~~~~~~~~~-----~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      +.-+     +|.|++..+++.+-..     .+|.|+|++.. +|...|.....++...++.++.||+.||+|||+.||.|
T Consensus       106 LcfF-----kHdNVLSaLDILQPph~dfFqEiYV~TELmQS-DLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILH  179 (449)
T KOG0664|consen  106 LSSF-----RHDNVLSLLDILQPANPSFFQELYVLTELMQS-DLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILH  179 (449)
T ss_pred             HHhh-----ccccHHHHHHhcCCCCchHHHHHHHHHHHHHh-hhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhh
Confidence            9998     9999999999887654     46789999865 89888888889999999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC--cccccCCcccccccccccC-CCCchhhhHHHHHHHHHHHhCCC
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP--VVGLFGSIDYVSPEALLQD-RITSKSDMWSLGVILYILLSGYP  242 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~~ll~g~~  242 (521)
                      |||||.|.|+   +++..+||||||+|+.....+.  .+..+.|.+|+|||++.+. .|+.++||||+|||+.||+..+.
T Consensus       180 RDIKPGNLLV---NSNCvLKICDFGLARvee~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrI  256 (449)
T KOG0664|consen  180 RDIKPGNLLV---NSNCILKICDFGLARTWDQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKI  256 (449)
T ss_pred             ccCCCccEEe---ccCceEEecccccccccchhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhh
Confidence            9999999999   8899999999999997654432  3344678999999998764 68999999999999999999999


Q ss_pred             CCCCCCcHHHHHHHHcCCC-----------------------CCch-hh-h-----hccCHHHHHHHHHhccCCCCCCCC
Q 009980          243 PFIAQSNRQKQQMIMAGEF-----------------------SFYE-QT-W-----KNISSSAKQLISSLLTVDPNRRPS  292 (521)
Q Consensus       243 pf~~~~~~~~~~~i~~~~~-----------------------~~~~-~~-~-----~~~s~~~~~li~~~l~~dp~~R~t  292 (521)
                      .|...++-+.++.|..-..                       ..+. +. +     ..-..+...++.+||..||++|.+
T Consensus       257 LFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris  336 (449)
T KOG0664|consen  257 LFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRIS  336 (449)
T ss_pred             hhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCccccc
Confidence            9988887776665543111                       1111 00 0     112345778999999999999999


Q ss_pred             HHHHHcCCcccC
Q 009980          293 AQELLNHPWVIG  304 (521)
Q Consensus       293 ~~~~l~h~~~~~  304 (521)
                      .++++.|+++-.
T Consensus       337 ~~~A~~~~~~~e  348 (449)
T KOG0664|consen  337 VEEALQHRYLEE  348 (449)
T ss_pred             Hhhhcccccccc
Confidence            999999999853

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-35  Score=287.01  Aligned_cols=252  Identities=24%  Similarity=0.332  Sum_probs=206.6

Q ss_pred             ccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEI   88 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   88 (521)
                      .+...++++||+|.||.|.+|.-.   .+..||||.++.....                           -.+..+.+|+
T Consensus       537 Rs~L~~~ekiGeGqFGEVhLCeve---g~lkVAVK~Lr~~a~~---------------------------~~r~~F~kEI  586 (807)
T KOG1094|consen  537 RSRLRFKEKIGEGQFGEVHLCEVE---GPLKVAVKILRPDATK---------------------------NARNDFLKEI  586 (807)
T ss_pred             hhheehhhhhcCcccceeEEEEec---CceEEEEeecCcccch---------------------------hHHHHHHHHH
Confidence            456778999999999999999875   3578999998754322                           1245699999


Q ss_pred             HHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 009980           89 LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE--RYMEVGAAAVIRQIAEGLAALHQANIVHR  166 (521)
Q Consensus        89 ~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~al~~lH~~~i~H~  166 (521)
                      ++|.+|     +||||+++++++..++.+++|+||++.|+|.+++.++.  .........|+.||++|++||.+.++|||
T Consensus       587 kiLsqL-----khPNIveLvGVC~~DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHr  661 (807)
T KOG1094|consen  587 KILSRL-----KHPNIVELLGVCVQDDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHR  661 (807)
T ss_pred             HHHhcc-----CCCCeeEEEeeeecCCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhc
Confidence            999999     99999999999999999999999999999999998873  33455677799999999999999999999


Q ss_pred             cCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC---cccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh--CC
Q 009980          167 DLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS--GY  241 (521)
Q Consensus       167 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~--g~  241 (521)
                      ||.+.|+|+   +.+.++||+|||+++..-....   ....+-+..|||||.+..++++.++|+|++|+++||+++  ..
T Consensus       662 d~a~rNcLv---~~e~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e  738 (807)
T KOG1094|consen  662 DLATRNCLV---DGEFTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCRE  738 (807)
T ss_pred             cccccceee---cCcccEEecCcccccccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhh
Confidence            999999999   8999999999999985322221   122234678999999999999999999999999999765  78


Q ss_pred             CCCCCCCcHHHHHHHHcCC----CCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          242 PPFIAQSNRQKQQMIMAGE----FSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       242 ~pf~~~~~~~~~~~i~~~~----~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      .||...+.++..++.-.-.    .......+.-++..+.+++.+|+..+-.+|||++++..
T Consensus       739 ~Py~~lt~e~vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~  799 (807)
T KOG1094|consen  739 QPYSQLTDEQVVENAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHL  799 (807)
T ss_pred             CchhhhhHHHHHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHH
Confidence            9998888877766543211    11111233568999999999999999999999999865

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-35  Score=297.10  Aligned_cols=250  Identities=29%  Similarity=0.403  Sum_probs=214.5

Q ss_pred             ceeecccccccCceEEEEeEEccCC-CcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           11 EYEVTDILGRGGFSVVRRGIKKTCG-ETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        11 ~Y~~~~~lG~G~~g~V~~a~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      .-.|.++||.|.||.||+|+.+..+ ....||||.++.....                           ..+..|..|..
T Consensus       630 ~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gyte---------------------------kqrrdFL~EAs  682 (996)
T KOG0196|consen  630 CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTE---------------------------KQRRDFLSEAS  682 (996)
T ss_pred             heEEEEEEecccccceecccccCCCCcceeEEEeeeccCccH---------------------------HHHhhhhhhhh
Confidence            4567889999999999999998643 2356999999643221                           22445899999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQANIVHRDL  168 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~~~i~H~dl  168 (521)
                      ||.++     +||||++|.++......+.||+|||++|+|-.+|..+ +.|+..+...+++-|+.|++||.+.|+|||||
T Consensus       683 IMGQF-----dHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDL  757 (996)
T KOG0196|consen  683 IMGQF-----DHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDL  757 (996)
T ss_pred             hcccC-----CCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhh
Confidence            99999     9999999999999999999999999999999999764 67999999999999999999999999999999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCccCCCCC-Cccccc-C--CcccccccccccCCCCchhhhHHHHHHHHHHHh-CCCC
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLF-G--SIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPP  243 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~-g--t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~p  243 (521)
                      .+.|||+   +++-.+|++|||+++...... ...+.. |  +..|.|||.+...+++.++||||+||++||.++ |..|
T Consensus       758 AARNILV---NsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERP  834 (996)
T KOG0196|consen  758 AARNILV---NSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP  834 (996)
T ss_pred             hhhheee---ccceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCc
Confidence            9999999   888999999999998653322 122222 2  467999999999999999999999999999887 9999


Q ss_pred             CCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          244 FIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       244 f~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      |++.++.+..+.|..+-.-++   +.++|..+..|+..||++|-.+||++.||+.
T Consensus       835 YWdmSNQdVIkaIe~gyRLPp---PmDCP~aL~qLMldCWqkdR~~RP~F~qiV~  886 (996)
T KOG0196|consen  835 YWDMSNQDVIKAIEQGYRLPP---PMDCPAALYQLMLDCWQKDRNRRPKFAQIVS  886 (996)
T ss_pred             ccccchHHHHHHHHhccCCCC---CCCCcHHHHHHHHHHHHHHhhcCCCHHHHHH
Confidence            999999999999988743222   2579999999999999999999999999987

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=100.00  E-value=4.8e-35  Score=283.64  Aligned_cols=209  Identities=29%  Similarity=0.520  Sum_probs=179.1

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      .+|...+.+|.|+||.|++|.++.  ....|+||.+.|......-               +...++     -..+-.||+
T Consensus       561 s~yttlq~lG~GAyGkV~lai~K~--n~~eVViK~I~KeRIL~Dt---------------WvrDrk-----LGtVp~EIq  618 (772)
T KOG1152|consen  561 SDYTTLQPLGEGAYGKVNLAIHKE--NNYEVVIKMIFKERILVDT---------------WVRDRK-----LGTVPSEIQ  618 (772)
T ss_pred             ccceeeeeccccccceEEEeeecc--cceEEEeeehhhhhhhhhh---------------hhcccc-----cCccchhHH
Confidence            469999999999999999999998  7889999999886543210               000000     122567999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEecc-CCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELC-SGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDL  168 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~-~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dl  168 (521)
                      ||..+.+.  .||||++++++|++++++||+||-- +|.+|+++|...++++|.++..|++|+..|+++||+.||+||||
T Consensus       619 Ila~l~~~--sH~NIlKlLdfFEddd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdi  696 (772)
T KOG1152|consen  619 ILATLNKH--SHENILKLLDFFEDDDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDI  696 (772)
T ss_pred             HHHHhhhc--CccchhhhhheeecCCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceeccc
Confidence            99999333  5999999999999999999999964 56799999999999999999999999999999999999999999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCC-CchhhhHHHHHHHHHHHhCCCCCCC
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRI-TSKSDMWSLGVILYILLSGYPPFIA  246 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~~ll~g~~pf~~  246 (521)
                      |-+|+.+   +.+|.+||+|||.|.... +.+.....||..|.|||++.+.+| +..-|||+||++||.++....||..
T Consensus       697 kdenviv---d~~g~~klidfgsaa~~k-sgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn  771 (772)
T KOG1152|consen  697 KDENVIV---DSNGFVKLIDFGSAAYTK-SGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN  771 (772)
T ss_pred             ccccEEE---ecCCeEEEeeccchhhhc-CCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence            9999999   899999999999997654 345566789999999999999888 6788999999999999999999864

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=100.00  E-value=4.7e-34  Score=321.45  Aligned_cols=241  Identities=24%  Similarity=0.319  Sum_probs=184.9

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ..|...+.||+|+||.||+|+++.  ++..||||.+.....                                ....|+.
T Consensus       690 ~~~~~~~~ig~G~~g~Vy~~~~~~--~~~~vavK~~~~~~~--------------------------------~~~~~~~  735 (968)
T PLN00113        690 SSLKEENVISRGKKGASYKGKSIK--NGMQFVVKEINDVNS--------------------------------IPSSEIA  735 (968)
T ss_pred             hhCCcccEEccCCCeeEEEEEECC--CCcEEEEEEccCCcc--------------------------------ccHHHHH
Confidence            456667789999999999999977  788999999853211                                1234678


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCCeec
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALH---QANIVHR  166 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH---~~~i~H~  166 (521)
                      .++++     +|||||++++++.+++..|+||||++||+|.+++.   .+++..+..++.|++.||+|||   +.+|+||
T Consensus       736 ~l~~l-----~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~---~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~  807 (968)
T PLN00113        736 DMGKL-----QHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLR---NLSWERRRKIAIGIAKALRFLHCRCSPAVVVG  807 (968)
T ss_pred             HHhhC-----CCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHh---cCCHHHHHHHHHHHHHHHHHhccCCCCCeecC
Confidence            88888     99999999999999999999999999999999985   3789999999999999999999   6699999


Q ss_pred             cCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCC
Q 009980          167 DLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIA  246 (521)
Q Consensus       167 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~  246 (521)
                      ||||+||++   +.....++. ||.+.....   .....||+.|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus       808 dlkp~Nil~---~~~~~~~~~-~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~  880 (968)
T PLN00113        808 NLSPEKIII---DGKDEPHLR-LSLPGLLCT---DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADA  880 (968)
T ss_pred             CCCHHhEEE---CCCCceEEE-ecccccccc---CCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCc
Confidence            999999999   555666664 665543221   1223688999999999998999999999999999999999999854


Q ss_pred             CCc--HHHH---HHHHcC---------CCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          247 QSN--RQKQ---QMIMAG---------EFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       247 ~~~--~~~~---~~i~~~---------~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      ...  ....   +.....         ..............++.+++.+||..||++|||+.++++.
T Consensus       881 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~  947 (968)
T PLN00113        881 EFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKT  947 (968)
T ss_pred             ccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHH
Confidence            221  1111   111000         0000000001123357789999999999999999999873

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=100.00  E-value=3.3e-34  Score=269.70  Aligned_cols=261  Identities=25%  Similarity=0.423  Sum_probs=202.0

Q ss_pred             cccccccceeecccccccCceEEEEeEEcc-CCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHH
Q 009980            4 ETRKLTDEYEVTDILGRGGFSVVRRGIKKT-CGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDA   82 (521)
Q Consensus         4 ~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~-~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (521)
                      ....+.+.|.++.+||.|.|++||+|.+.. .+..+.||+|.+.....                              -.
T Consensus        30 ~~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~------------------------------p~   79 (418)
T KOG1167|consen   30 DIPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS------------------------------PS   79 (418)
T ss_pred             hhhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC------------------------------ch
Confidence            355677889999999999999999998864 23567899999865432                              23


Q ss_pred             HHHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 009980           83 LLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQAN  162 (521)
Q Consensus        83 ~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~  162 (521)
                      .+.+|+++|..+    ..+.||+++.+++..++++.+||||++..+..++..   .++-.++..+++.++.||.++|.+|
T Consensus        80 ri~~El~~L~~~----gG~~ni~~~~~~~rnnd~v~ivlp~~~H~~f~~l~~---~l~~~~i~~Yl~~ll~Al~~~h~~G  152 (418)
T KOG1167|consen   80 RILNELEMLYRL----GGSDNIIKLNGCFRNNDQVAIVLPYFEHDRFRDLYR---SLSLAEIRWYLRNLLKALAHLHKNG  152 (418)
T ss_pred             HHHHHHHHHHHh----ccchhhhcchhhhccCCeeEEEecccCccCHHHHHh---cCCHHHHHHHHHHHHHHhhhhhccC
Confidence            488999999988    589999999999999999999999999887777664   3779999999999999999999999


Q ss_pred             CeeccCCCCcEEEeeCCCCCCEEEeecCCCccC-----------------CC-C-------------CC-----------
Q 009980          163 IVHRDLKPENCLFLNDREDSPLKIMDFGLSSVE-----------------GY-T-------------DP-----------  200 (521)
Q Consensus       163 i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~-----------------~~-~-------------~~-----------  200 (521)
                      |+||||||.|+++.  ...+.-.|+|||+|...                 .. .             .+           
T Consensus       153 IvHRDiKpsNFL~n--~~t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r  230 (418)
T KOG1167|consen  153 IVHRDIKPSNFLYN--RRTQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGR  230 (418)
T ss_pred             ccccCCCccccccc--cccCCceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCc
Confidence            99999999999994  35567899999998610                 00 0             00           


Q ss_pred             ---cccccCCcccccccccccCC-CCchhhhHHHHHHHHHHHhCCCCCCCCCcH--------------HHHHH-HHcCC-
Q 009980          201 ---VVGLFGSIDYVSPEALLQDR-ITSKSDMWSLGVILYILLSGYPPFIAQSNR--------------QKQQM-IMAGE-  260 (521)
Q Consensus       201 ---~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~~ll~g~~pf~~~~~~--------------~~~~~-i~~~~-  260 (521)
                         .....||++|.|||++...+ .+.++||||.|||+..++++..||......              ++.+. ...|. 
T Consensus       231 ~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~  310 (418)
T KOG1167|consen  231 PSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRI  310 (418)
T ss_pred             cceecccCCCCCCCchHHHhhccCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCce
Confidence               01235999999999987543 578999999999999999999998543321              00000 00011 


Q ss_pred             --------------------------CC-----Cchhhh-hccCHHHHHHHHHhccCCCCCCCCHHHHHcCCccc
Q 009980          261 --------------------------FS-----FYEQTW-KNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVI  303 (521)
Q Consensus       261 --------------------------~~-----~~~~~~-~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~  303 (521)
                                                .+     .....| ...+..+.+|+.+||..||.+|.|++++|+||||.
T Consensus       311 ~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~  385 (418)
T KOG1167|consen  311 LLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFD  385 (418)
T ss_pred             eeeccccccccHHHHhchhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCc
Confidence                                      00     000111 12355789999999999999999999999999997

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=100.00  E-value=1.5e-33  Score=240.28  Aligned_cols=214  Identities=23%  Similarity=0.323  Sum_probs=173.9

Q ss_pred             ccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEI   88 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   88 (521)
                      .++...+..||+|+||.|-+.++..  +|...|+|.++..-.                           +...+.+.+|+
T Consensus        45 ad~L~~i~elGrGayG~vekmrh~~--sg~imAvKri~~tvn---------------------------~q~q~r~L~dl   95 (282)
T KOG0984|consen   45 ADDLVGIEELGRGAYGVVEKMRHIQ--SGTIMAVKRIRATVN---------------------------SQEQKRLLMDL   95 (282)
T ss_pred             hhhhhhhhhhcCCccchhhheeecc--CCeEEEEeeehhhcC---------------------------hHHHHHHHHhh
Confidence            3445556789999999999999998  889999999864221                           12334567788


Q ss_pred             HHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHH----HHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CC
Q 009980           89 LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFD----RIVAQERYMEVGAAAVIRQIAEGLAALHQA-NI  163 (521)
Q Consensus        89 ~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~----~l~~~~~~~~~~~~~i~~qil~al~~lH~~-~i  163 (521)
                      .+..+.    ..+|.+|.+|+.+.....++|.||.+.- ||..    .+.+.+..+|.-+-+|+..++.||.|||++ .+
T Consensus        96 di~~r~----~~CPf~V~FyGa~~regdvwIcME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~v  170 (282)
T KOG0984|consen   96 DIIMRT----VDCPFTVHFYGALFREGDVWICMELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSV  170 (282)
T ss_pred             hhhccC----CCCCeEEEeehhhhccccEEEeHHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhh
Confidence            777665    4899999999999999999999999964 6643    345677899999999999999999999988 89


Q ss_pred             eeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCccccccccccc----CCCCchhhhHHHHHHHHHHHh
Q 009980          164 VHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQ----DRITSKSDMWSLGVILYILLS  239 (521)
Q Consensus       164 ~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~~ll~  239 (521)
                      +|||+||+|||+   +..|.+|+||||.+.....+-..+-..|-..|||||.+..    ..|+-++||||||+++.||.+
T Consensus       171 IHRDvKPsNiLI---n~~GqVKiCDFGIsG~L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~  247 (282)
T KOG0984|consen  171 IHRDVKPSNILI---NYDGQVKICDFGISGYLVDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAI  247 (282)
T ss_pred             hhccCCcceEEE---ccCCcEEEcccccceeehhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhh
Confidence            999999999999   8899999999999987654443333457778999999863    378999999999999999999


Q ss_pred             CCCCCCC-CCcHHHHHHHHcC
Q 009980          240 GYPPFIA-QSNRQKQQMIMAG  259 (521)
Q Consensus       240 g~~pf~~-~~~~~~~~~i~~~  259 (521)
                      ++.||.. .++-+.++++...
T Consensus       248 lr~PY~~w~tpF~qLkqvVee  268 (282)
T KOG0984|consen  248 LRFPYESWGTPFQQLKQVVEE  268 (282)
T ss_pred             ccccccccCCHHHHHHHHhcC
Confidence            9999954 4555666665544

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.3e-32  Score=288.08  Aligned_cols=251  Identities=25%  Similarity=0.426  Sum_probs=206.8

Q ss_pred             ceeecccccccCceEEEEeEEccCC-----CcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980           11 EYEVTDILGRGGFSVVRRGIKKTCG-----ETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus        11 ~Y~~~~~lG~G~~g~V~~a~~~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      +..+.+.||+|.||.|++|......     ....||||.++.....                           .....+.
T Consensus       297 ~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~---------------------------~~~~~~~  349 (609)
T KOG0200|consen  297 NLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS---------------------------SEKKDLM  349 (609)
T ss_pred             hccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc---------------------------HHHHHHH
Confidence            3356679999999999999755211     1457999998653321                           3356789


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC----------------CCCHHHHHHHHH
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE----------------RYMEVGAAAVIR  149 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~----------------~~~~~~~~~i~~  149 (521)
                      .|+.+|+.+    +.||||+.+.+++...+.+++|+|||..|+|.+++...+                .++..+...++.
T Consensus       350 ~El~~m~~~----g~H~niv~llG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~  425 (609)
T KOG0200|consen  350 SELNVLKEL----GKHPNIVNLLGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAY  425 (609)
T ss_pred             HHHHHHHHh----cCCcchhhheeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHH
Confidence            999999998    589999999999999999999999999999999998765                388999999999


Q ss_pred             HHHHHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcc--cccC--CcccccccccccCCCCchh
Q 009980          150 QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVV--GLFG--SIDYVSPEALLQDRITSKS  225 (521)
Q Consensus       150 qil~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~--~~~g--t~~y~aPE~~~~~~~~~~~  225 (521)
                      ||+.|+.||++++++||||-+.|||+   ..+..+||+|||+|+.........  ...|  ...|||||.+....|+.++
T Consensus       426 QIa~GMe~L~~~~~vHRDLAaRNVLi---~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kS  502 (609)
T KOG0200|consen  426 QIANGMEYLASVPCVHRDLAARNVLI---TKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKS  502 (609)
T ss_pred             HHHHHHHHHhhCCccchhhhhhhEEe---cCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccc
Confidence            99999999999999999999999999   777889999999998543322221  1223  2349999999999999999


Q ss_pred             hhHHHHHHHHHHHh-CCCCCCCCC-cHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          226 DMWSLGVILYILLS-GYPPFIAQS-NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       226 DiwslG~il~~ll~-g~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      ||||+||+|||++| |..||.+.. ..+..+.+..|....   .+..+++++.++++.||..+|++||++.++..
T Consensus       503 DVWSfGI~L~EifsLG~~PYp~~~~~~~l~~~l~~G~r~~---~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~  574 (609)
T KOG0200|consen  503 DVWSFGILLWEIFTLGGTPYPGIPPTEELLEFLKEGNRME---QPEHCSDEIYDLMKSCWNADPEDRPTFSECVE  574 (609)
T ss_pred             hhhHHHHHHHHHhhCCCCCCCCCCcHHHHHHHHhcCCCCC---CCCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence            99999999999999 899998855 556666666665422   22568999999999999999999999999875

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.9e-33  Score=249.22  Aligned_cols=259  Identities=24%  Similarity=0.375  Sum_probs=198.9

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      -.+.+.|.|.+.||+|.||.+-+|+|+.  ++..+|+|.+++...                             ..+.+.
T Consensus        20 v~l~d~y~I~k~lgeG~FgkIlL~eHr~--s~t~ivlKavp~p~t-----------------------------t~~dF~   68 (378)
T KOG1345|consen   20 VDLEDVYTINKQLGEGRFGKILLAEHRQ--SKTRIVLKAVPRPQT-----------------------------TQADFV   68 (378)
T ss_pred             cchhhhhhHHHHhcccceeeEEeeeccC--CceEEEeeccCcchh-----------------------------hHHHHH
Confidence            3577899999999999999999999998  788999999875321                             234477


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEE-EEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDV-YEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIV  164 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~-~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~  164 (521)
                      +|...--.|    +.|.||+.-|++ |++.+.+.++|||++-|+|.+-+... .+-|.....++.|+++|+.|+|++++|
T Consensus        69 rEfhY~~~L----s~H~hIi~tY~vaFqt~d~YvF~qE~aP~gdL~snv~~~-GigE~~~K~v~~ql~SAi~fMHsknlV  143 (378)
T KOG1345|consen   69 REFHYSFFL----SPHQHIIDTYEVAFQTSDAYVFVQEFAPRGDLRSNVEAA-GIGEANTKKVFAQLLSAIEFMHSKNLV  143 (378)
T ss_pred             HHhccceee----ccchhhhHHHHHHhhcCceEEEeeccCccchhhhhcCcc-cccHHHHHHHHHHHHHHHHHhhccchh
Confidence            776654433    689999988776 78888999999999999998877664 478999999999999999999999999


Q ss_pred             eccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccC-----CCCchhhhHHHHHHHHHHHh
Q 009980          165 HRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQD-----RITSKSDMWSLGVILYILLS  239 (521)
Q Consensus       165 H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DiwslG~il~~ll~  239 (521)
                      |||||.+|||+...+- ..+||||||.++..+..-...  --+..|.|||.+...     ..++.+|+|.+|+++|.++|
T Consensus       144 HRdlK~eNiLif~~df-~rvKlcDFG~t~k~g~tV~~~--~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~clt  220 (378)
T KOG1345|consen  144 HRDLKAENILIFDADF-YRVKLCDFGLTRKVGTTVKYL--EYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLT  220 (378)
T ss_pred             hcccccceEEEecCCc-cEEEeeecccccccCceehhh--hhhcccCCcHHHhhccccceEecccccchheeeeeeeeec
Confidence            9999999999976544 489999999998654332211  235568899876532     23678999999999999999


Q ss_pred             CCCCCCCCCcH----HHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCC---CCHHHHHcCCccc
Q 009980          240 GYPPFIAQSNR----QKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR---PSAQELLNHPWVI  303 (521)
Q Consensus       240 g~~pf~~~~~~----~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R---~t~~~~l~h~~~~  303 (521)
                      |.+||......    -...+...+.-+-.+..+..+|+.+..+.++-|..+|++|   -++.......|..
T Consensus       221 G~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w~E  291 (378)
T KOG1345|consen  221 GKFPWQKASIMDKPYWEWEQWLKRKNPALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLWKE  291 (378)
T ss_pred             CCCcchhhhccCchHHHHHHHhcccCccCchhhcccCHHHHHHHHHhcCCcccccchhHHHHHHHHHHHHH
Confidence            99999643221    1122223333333344567789999999999999999999   4455555555553

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.98  E-value=2.4e-32  Score=274.38  Aligned_cols=246  Identities=26%  Similarity=0.390  Sum_probs=206.9

Q ss_pred             ecccccccCceEEEEeEEccCC--CcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHH
Q 009980           14 VTDILGRGGFSVVRRGIKKTCG--ETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVM   91 (521)
Q Consensus        14 ~~~~lG~G~~g~V~~a~~~~~~--~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l   91 (521)
                      -.++||+|+||+||+|..-..+  -.-+||||++......                           .....+..|..+|
T Consensus       700 k~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~---------------------------~~s~e~LdeAl~m  752 (1177)
T KOG1025|consen  700 KDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSP---------------------------KASIELLDEALRM  752 (1177)
T ss_pred             hhceeccccceeEEeeeEecCCceecceeEEEEeeccCCc---------------------------hhhHHHHHHHHHH
Confidence            3578999999999999886532  2246899998654322                           2245688999999


Q ss_pred             HHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCC
Q 009980           92 RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKP  170 (521)
Q Consensus        92 ~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp  170 (521)
                      .++     +|||++++++++.... +-||++|+++|+|.|++..+ ..+-......|..||++|+.|||.++++||||-.
T Consensus       753 asl-----dHpnl~RLLgvc~~s~-~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaa  826 (1177)
T KOG1025|consen  753 ASL-----DHPNLLRLLGVCMLST-LQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAA  826 (1177)
T ss_pred             hcC-----CCchHHHHhhhcccch-HHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhh
Confidence            999     9999999999997666 78999999999999999864 5688899999999999999999999999999999


Q ss_pred             CcEEEeeCCCCCCEEEeecCCCccCCCCCCccc---ccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CCCCCCC
Q 009980          171 ENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVG---LFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIA  246 (521)
Q Consensus       171 ~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~---~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~pf~~  246 (521)
                      .|||+   ..-..+||.|||+|+..........   ..-.+.|||-|.+....|++++||||+||++||++| |..|+.+
T Consensus       827 RNVLV---ksP~hvkitdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~g  903 (1177)
T KOG1025|consen  827 RNVLV---KSPNHVKITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDG  903 (1177)
T ss_pred             hheee---cCCCeEEEEecchhhccCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCC
Confidence            99999   7778899999999987654332221   123567999999999999999999999999999999 9999999


Q ss_pred             CCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          247 QSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       247 ~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      ....++-..+..+.. .+.  ++.++.++.-++.+||..|+..||+++++..
T Consensus       904 i~~~eI~dlle~geR-Lsq--PpiCtiDVy~~mvkCwmid~~~rp~fkel~~  952 (1177)
T KOG1025|consen  904 IPAEEIPDLLEKGER-LSQ--PPICTIDVYMVMVKCWMIDADSRPTFKELAE  952 (1177)
T ss_pred             CCHHHhhHHHhcccc-CCC--CCCccHHHHHHHHHHhccCcccCccHHHHHH
Confidence            999998888877765 222  2568999999999999999999999988764

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=1.7e-31  Score=252.18  Aligned_cols=251  Identities=22%  Similarity=0.392  Sum_probs=190.5

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      +.+..+-.+.+.||+|.||.||+|..+    |..||||++..                               .++....
T Consensus       207 RTiarqI~L~e~IGkGRyGEVwrG~wr----Ge~VAVKiF~s-------------------------------rdE~SWf  251 (513)
T KOG2052|consen  207 RTIARQIVLQEIIGKGRFGEVWRGRWR----GEDVAVKIFSS-------------------------------RDERSWF  251 (513)
T ss_pred             HhhhheeEEEEEecCccccceeecccc----CCceEEEEecc-------------------------------cchhhhh
Confidence            345677888999999999999999884    67899999853                               2344567


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeC----CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQ----NGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQA  161 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~----~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~  161 (521)
                      +|.++.+-.+   .+|+||+.+++.-..+    .++|||++|-+.|||+|++.. ..++...+..++..+++||++||..
T Consensus       252 rEtEIYqTvm---LRHENILgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r-~tv~~~~ml~LalS~AsGLaHLH~e  327 (513)
T KOG2052|consen  252 RETEIYQTVM---LRHENILGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNR-NTVTTEGMLKLALSIASGLAHLHME  327 (513)
T ss_pred             hHHHHHHHHH---hccchhhhhhhccccCCCceEEEEEeeecccCCcHHHHHhh-ccCCHHHHHHHHHHHhhhHHHHHHH
Confidence            7777776653   2999999999876433    268999999999999999988 6799999999999999999999953


Q ss_pred             --------CCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC-----CcccccCCcccccccccccCC----C--C
Q 009980          162 --------NIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD-----PVVGLFGSIDYVSPEALLQDR----I--T  222 (521)
Q Consensus       162 --------~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~----~--~  222 (521)
                              .|.|||||..|||+   ..++.+-|+|+|+|.......     .....+||..|||||++...-    +  -
T Consensus       328 I~GTqgKPaIAHRDlKSKNILV---Kkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesy  404 (513)
T KOG2052|consen  328 IVGTQGKPAIAHRDLKSKNILV---KKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESY  404 (513)
T ss_pred             HhcCCCCchhhccccccccEEE---ccCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhh
Confidence                    49999999999999   889999999999997643321     234568999999999986431    1  1


Q ss_pred             chhhhHHHHHHHHHHHhC----------CCCCCCC-----CcHHHHHHHHcCCC-CCchhhhhccC--HHHHHHHHHhcc
Q 009980          223 SKSDMWSLGVILYILLSG----------YPPFIAQ-----SNRQKQQMIMAGEF-SFYEQTWKNIS--SSAKQLISSLLT  284 (521)
Q Consensus       223 ~~~DiwslG~il~~ll~g----------~~pf~~~-----~~~~~~~~i~~~~~-~~~~~~~~~~s--~~~~~li~~~l~  284 (521)
                      ..+||||+|.++||++..          ++||.+-     +.+++.+-+--..+ +..+..|...+  ..+..+++.||.
T Consensus       405 k~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~  484 (513)
T KOG2052|consen  405 KRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWY  484 (513)
T ss_pred             hHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhc
Confidence            368999999999998862          5788543     22333322211222 22334454432  235678999999


Q ss_pred             CCCCCCCCHHHHHc
Q 009980          285 VDPNRRPSAQELLN  298 (521)
Q Consensus       285 ~dp~~R~t~~~~l~  298 (521)
                      .||..|.||-.+-+
T Consensus       485 ~Np~aRltALriKK  498 (513)
T KOG2052|consen  485 ANPAARLTALRIKK  498 (513)
T ss_pred             CCchhhhHHHHHHH
Confidence            99999998865543

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.97  E-value=1.6e-31  Score=254.31  Aligned_cols=243  Identities=24%  Similarity=0.373  Sum_probs=186.4

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ...++.++||+|.||.||+|..    .++.||||+++..                               ..+.+.+|-.
T Consensus       210 ~pl~l~eli~~Grfg~V~KaqL----~~~~VAVKifp~~-------------------------------~kqs~~~Ek~  254 (534)
T KOG3653|consen  210 DPLQLLELIGRGRFGCVWKAQL----DNRLVAVKIFPEQ-------------------------------EKQSFQNEKN  254 (534)
T ss_pred             CchhhHHHhhcCccceeehhhc----cCceeEEEecCHH-------------------------------HHHHHHhHHH
Confidence            3455678999999999999987    4589999998642                               2344777777


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCC----eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC----
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQN----GVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQA----  161 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~----~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~----  161 (521)
                      +..-.   ...|+||++++..-+...    .++||++|-+.|+|.+++..+ .++..+...++..|+.||+|||+-    
T Consensus       255 Iy~lp---~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~kGsL~dyL~~n-tisw~~~cria~SmarGLa~LHee~p~~  330 (534)
T KOG3653|consen  255 IYSLP---GMKHENILQFIGAEKRGTADRMEYWLVTEFHPKGSLCDYLKAN-TISWNSLCRIAESMARGLAHLHEELPRG  330 (534)
T ss_pred             HHhcc---CccchhHHHhhchhccCCccccceeEEeeeccCCcHHHHHHhc-cccHHHHHHHHHHHHHHHHHhcccCCcC
Confidence            76554   238999999998866554    899999999999999999875 589999999999999999999963    


Q ss_pred             -----CCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC---cccccCCcccccccccccCC-CC-----chhhh
Q 009980          162 -----NIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALLQDR-IT-----SKSDM  227 (521)
Q Consensus       162 -----~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~-~~-----~~~Di  227 (521)
                           .|+|||||..|||+   .++.+.-|+|||+|....+..+   ....+||..|||||++.+.- ..     .+.||
T Consensus       331 d~~Kp~IaHRDlkSkNVLv---K~DlTccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~Dv  407 (534)
T KOG3653|consen  331 DHHKPPIAHRDLKSKNVLV---KNDLTCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDV  407 (534)
T ss_pred             CCCCCccccccccccceEE---ccCCcEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHH
Confidence                 59999999999999   8889999999999987665443   23468999999999997642 11     36899


Q ss_pred             HHHHHHHHHHHhCCC------------CCC-----CCCcHHHHHHHHcCCC-CCchhhhhc--cCHHHHHHHHHhccCCC
Q 009980          228 WSLGVILYILLSGYP------------PFI-----AQSNRQKQQMIMAGEF-SFYEQTWKN--ISSSAKQLISSLLTVDP  287 (521)
Q Consensus       228 wslG~il~~ll~g~~------------pf~-----~~~~~~~~~~i~~~~~-~~~~~~~~~--~s~~~~~li~~~l~~dp  287 (521)
                      ||+|.+|||+++...            ||.     ..+.+++...+.+... +.....|..  -...+++.+..||..||
T Consensus       408 YamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDa  487 (534)
T KOG3653|consen  408 YAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDA  487 (534)
T ss_pred             HHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCch
Confidence            999999999998533            332     1233344444443322 222233432  23457899999999999


Q ss_pred             CCCCCHH
Q 009980          288 NRRPSAQ  294 (521)
Q Consensus       288 ~~R~t~~  294 (521)
                      +.|.|+.
T Consensus       488 eARLTA~  494 (534)
T KOG3653|consen  488 EARLTAG  494 (534)
T ss_pred             hhhhhhH
Confidence            9999974

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.97  E-value=6.9e-30  Score=235.04  Aligned_cols=211  Identities=41%  Similarity=0.688  Sum_probs=183.4

Q ss_pred             ccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHHhhc
Q 009980           18 LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVEN   97 (521)
Q Consensus        18 lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~   97 (521)
                      ||+|++|.||++....  +++.+++|++......                           .....+.+|+..++.+   
T Consensus         1 l~~g~~~~v~~~~~~~--~~~~~~~K~~~~~~~~---------------------------~~~~~~~~e~~~~~~l---   48 (215)
T cd00180           1 LGEGGFGTVYLARDKK--TGKKVAIKIIKKEDSS---------------------------SLLEELLREIEILKKL---   48 (215)
T ss_pred             CCcCCceEEEEEEecC--CCcEEEEEEeccccch---------------------------hHHHHHHHHHHHHHhc---
Confidence            6899999999999976  6889999998643211                           0235688999999998   


Q ss_pred             cCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEe
Q 009980           98 VSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFL  176 (521)
Q Consensus        98 ~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~~  176 (521)
                        .||+|+++++++......+++||++.|++|.+++... ..++...+..++.+++.++.+||+.|++|+||+|.||++ 
T Consensus        49 --~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~-  125 (215)
T cd00180          49 --NHPNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILL-  125 (215)
T ss_pred             --CCCCeeeEeeeeecCCeEEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEE-
Confidence              8999999999999999999999999999999998775 578999999999999999999999999999999999999 


Q ss_pred             eCCC-CCCEEEeecCCCccCCCCC-CcccccCCcccccccccccC-CCCchhhhHHHHHHHHHHHhCCCCCCCCCcHHHH
Q 009980          177 NDRE-DSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALLQD-RITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQ  253 (521)
Q Consensus       177 ~~~~-~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~  253 (521)
                        +. .+.++|+|||.+....... ......+...|++||.+... .++.+.|+|++|++++++                
T Consensus       126 --~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l----------------  187 (215)
T cd00180         126 --DSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL----------------  187 (215)
T ss_pred             --eCCCCcEEEecCCceEEccCCcchhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH----------------
Confidence              55 6789999999997654332 12334578889999999876 788999999999999999                


Q ss_pred             HHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCC
Q 009980          254 QMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHP  300 (521)
Q Consensus       254 ~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~  300 (521)
                                         ..+.+++.+|+..+|.+||++.++++|+
T Consensus       188 -------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~~  215 (215)
T cd00180         188 -------------------PELKDLIRKMLQKDPEKRPSAKEILEHL  215 (215)
T ss_pred             -------------------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence                               5788999999999999999999999875

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.97  E-value=7.3e-30  Score=237.86  Aligned_cols=213  Identities=36%  Similarity=0.547  Sum_probs=180.8

Q ss_pred             eeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHH
Q 009980           12 YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVM   91 (521)
Q Consensus        12 Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l   91 (521)
                      |.+.+.||.|++|.||+|.+..  +++.+|+|.+......                           .....+.+|+..+
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~--~~~~~~iK~~~~~~~~---------------------------~~~~~~~~e~~~~   51 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKG--TGELVAVKVLKKEKTE---------------------------KQREEFLREIRIL   51 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcC--CCcEEEEEeeccccch---------------------------HHHHHHHHHHHHH
Confidence            6788999999999999999987  6789999998653211                           1245688899999


Q ss_pred             HHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCC
Q 009980           92 RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQER-YMEVGAAAVIRQIAEGLAALHQANIVHRDLKP  170 (521)
Q Consensus        92 ~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~-~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp  170 (521)
                      +++     +|||++++++++......++++|++.+++|.+++..... +++..+..++.+++.++.+||+.+++|+||+|
T Consensus        52 ~~~-----~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~  126 (225)
T smart00221       52 KKL-----KHPNIVKLYGVFEDPEPLYLVMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKP  126 (225)
T ss_pred             HhC-----CCCChhhheeeeecCCceEEEEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCH
Confidence            998     999999999999999999999999999999999987766 89999999999999999999999999999999


Q ss_pred             CcEEEeeCCCCCCEEEeecCCCccCCCCC--CcccccCCccccccccc-ccCCCCchhhhHHHHHHHHHHHhCCCCCCC-
Q 009980          171 ENCLFLNDREDSPLKIMDFGLSSVEGYTD--PVVGLFGSIDYVSPEAL-LQDRITSKSDMWSLGVILYILLSGYPPFIA-  246 (521)
Q Consensus       171 ~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~~ll~g~~pf~~-  246 (521)
                      .||++   +.++.++|+|||.+.......  ......++..|++||.+ ....++.++|+|++|+++|+|++|+.||.. 
T Consensus       127 ~ni~v---~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~  203 (225)
T smart00221      127 ENILL---GMDGLVKLADFGLARFIHRDLAALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSGE  203 (225)
T ss_pred             HHEEE---cCCCCEEEeeCceeeEecCcccccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCcccc
Confidence            99999   666899999999988654332  22345688899999998 666788899999999999999999999977 


Q ss_pred             CC-cHHHHHHHHcCCC
Q 009980          247 QS-NRQKQQMIMAGEF  261 (521)
Q Consensus       247 ~~-~~~~~~~i~~~~~  261 (521)
                      .. ...+.+.+..+..
T Consensus       204 ~~~~~~~~~~~~~~~~  219 (225)
T smart00221      204 GEFTSLLSDVWSFGVP  219 (225)
T ss_pred             chhHHHHHHHHhcCCc
Confidence            33 3456666666553

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.97  E-value=1.5e-30  Score=285.27  Aligned_cols=199  Identities=23%  Similarity=0.209  Sum_probs=150.8

Q ss_pred             CC-CCccceeEEE-------EeCCeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCC
Q 009980          100 PH-PNVIDLYDVY-------EDQNGVHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKP  170 (521)
Q Consensus       100 ~h-pniv~~~~~~-------~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp  170 (521)
                      .| +||++++++|       .....++.+||++ +++|.+++.. ...+++.++..+++||+.||.|||++||+||||||
T Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP  108 (793)
T PLN00181         30 SHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRP  108 (793)
T ss_pred             hHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCc
Confidence            56 6888888877       3334677888987 5699999965 34699999999999999999999999999999999


Q ss_pred             CcEEEee----------------CCCCCCEEEeecCCCccCCCC-----------------CCcccccCCcccccccccc
Q 009980          171 ENCLFLN----------------DREDSPLKIMDFGLSSVEGYT-----------------DPVVGLFGSIDYVSPEALL  217 (521)
Q Consensus       171 ~Nil~~~----------------~~~~~~~kl~Dfg~a~~~~~~-----------------~~~~~~~gt~~y~aPE~~~  217 (521)
                      +|||+..                .+..+.+|++|||+++.....                 ......+||+.|||||++.
T Consensus       109 ~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~  188 (793)
T PLN00181        109 SCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDN  188 (793)
T ss_pred             hhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhc
Confidence            9999942                123456788888887642110                 0011245899999999999


Q ss_pred             cCCCCchhhhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHH
Q 009980          218 QDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELL  297 (521)
Q Consensus       218 ~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l  297 (521)
                      +..|+.++|||||||++|||++|.+|+....  .....+.....  +.. +....+...+++.+||.++|.+|||+.++|
T Consensus       189 ~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~--~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~L~~~P~~Rps~~eil  263 (793)
T PLN00181        189 GSSSNCASDVYRLGVLLFELFCPVSSREEKS--RTMSSLRHRVL--PPQ-ILLNWPKEASFCLWLLHPEPSCRPSMSELL  263 (793)
T ss_pred             cCCCCchhhhhhHHHHHHHHhhCCCchhhHH--HHHHHHHHhhc--Chh-hhhcCHHHHHHHHHhCCCChhhCcChHHHh
Confidence            9999999999999999999999999875432  12222222111  111 112245677999999999999999999999


Q ss_pred             cCCcccC
Q 009980          298 NHPWVIG  304 (521)
Q Consensus       298 ~h~~~~~  304 (521)
                      +||||..
T Consensus       264 ~h~~~~~  270 (793)
T PLN00181        264 QSEFINE  270 (793)
T ss_pred             hchhhhh
Confidence            9999975

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.96  E-value=8e-30  Score=265.09  Aligned_cols=265  Identities=25%  Similarity=0.461  Sum_probs=202.4

Q ss_pred             cccce-eecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            8 LTDEY-EVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         8 ~~~~Y-~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      +.+.| ...+.+|.|++|.|+.+....  ....++.|.+... ....                    . ........+..
T Consensus       315 ~~~~y~~~~~~~g~ga~g~~~~~~~~~--~~~~~~~~~~r~~-~~~~--------------------~-s~~~~~~~i~s  370 (601)
T KOG0590|consen  315 FSEKYGKPGRVLGSGAYGSVRIAKRRS--DLKSFPEKEFRVR-VKPT--------------------E-SERKYNYNITS  370 (601)
T ss_pred             cccccCCccceeeecccCceEEEEecC--CCccchhhhhhcc-cCCc--------------------c-cHHHHhhhhhh
Confidence            34556 446789999999888887776  4455666654311 0000                    0 00001111445


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHR  166 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~  166 (521)
                      |.-+-..+     .|||++.....+.+...++-+||||++ +|+.++...+.++..++..+++|++.|++|+|+.||.||
T Consensus       371 E~~i~~~l-----~h~~~~e~l~~~~~~~~~~~~mE~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~Giahr  444 (601)
T KOG0590|consen  371 EFCIGSSL-----SHPNIIETLDIVQEIDGILQSMEYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHR  444 (601)
T ss_pred             heeecccc-----cCCchhhhHHHHhhcccchhhhhcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceec
Confidence            55555555     999998888887777666667999999 999999988899999999999999999999999999999


Q ss_pred             cCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC-----CcccccCCcccccccccccCCCCc-hhhhHHHHHHHHHHHhC
Q 009980          167 DLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD-----PVVGLFGSIDYVSPEALLQDRITS-KSDMWSLGVILYILLSG  240 (521)
Q Consensus       167 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~-~~DiwslG~il~~ll~g  240 (521)
                      |+||+|+++   ..++.+||+|||.+.......     .....+|+..|+|||++.+..|++ ..||||+|++++.|.+|
T Consensus       445 dlK~enll~---~~~g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~  521 (601)
T KOG0590|consen  445 DLKLENLLV---TENGILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILG  521 (601)
T ss_pred             cCccccEEE---ecCCceEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecC
Confidence            999999999   778899999999987543322     235678999999999999999975 68999999999999999


Q ss_pred             CCCCCCCCcHHHH--HHH---HcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCC
Q 009980          241 YPPFIAQSNRQKQ--QMI---MAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGD  305 (521)
Q Consensus       241 ~~pf~~~~~~~~~--~~i---~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~  305 (521)
                      +.||......+..  ...   ......-+...+..++...+.+|.+||++||.+|.|+++|++.+||+..
T Consensus       522 ~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i  591 (601)
T KOG0590|consen  522 RFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSI  591 (601)
T ss_pred             CCccccccccccchhhhccccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhhc
Confidence            9999765544322  111   1111222345567789999999999999999999999999999999754

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.96  E-value=1.6e-28  Score=219.96  Aligned_cols=162  Identities=23%  Similarity=0.250  Sum_probs=130.2

Q ss_pred             CchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCccccc
Q 009980          127 GELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF  205 (521)
Q Consensus       127 g~L~~~l~~-~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~  205 (521)
                      |+|.+++.. ...+++.+++.++.|++.||.|||+++      ||+||++   +.++.+|+  ||++.......    ..
T Consensus         1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~---~~~~~~~~--fG~~~~~~~~~----~~   65 (176)
T smart00750        1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILL---TWDGLLKL--DGSVAFKTPEQ----SR   65 (176)
T ss_pred             CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeE---cCccceee--ccceEeecccc----CC
Confidence            689999986 456999999999999999999999999      9999999   77788888  99987654322    26


Q ss_pred             CCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCc-HHHHHHHHcCCCCCc---hhhhhccCH--HHHHHH
Q 009980          206 GSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSN-RQKQQMIMAGEFSFY---EQTWKNISS--SAKQLI  279 (521)
Q Consensus       206 gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-~~~~~~i~~~~~~~~---~~~~~~~s~--~~~~li  279 (521)
                      ||+.|+|||++.+..|+.++||||+||++|+|++|++||..... ......+........   ......++.  .+++++
T Consensus        66 g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  145 (176)
T smart00750       66 VDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFM  145 (176)
T ss_pred             CcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHH
Confidence            89999999999999999999999999999999999999976543 223333332222110   111233444  699999


Q ss_pred             HHhccCCCCCCCCHHHHHcCCccc
Q 009980          280 SSLLTVDPNRRPSAQELLNHPWVI  303 (521)
Q Consensus       280 ~~~l~~dp~~R~t~~~~l~h~~~~  303 (521)
                      .+||..+|.+|||+.+++.|+|+.
T Consensus       146 ~~cl~~~p~~Rp~~~~ll~~~~~~  169 (176)
T smart00750      146 RVCASRLPQRREAANHYLAHCRAL  169 (176)
T ss_pred             HHHHhcccccccCHHHHHHHHHHH
Confidence            999999999999999999999975

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.95  E-value=9.4e-27  Score=228.39  Aligned_cols=257  Identities=21%  Similarity=0.254  Sum_probs=195.4

Q ss_pred             ceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHH
Q 009980           11 EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILV   90 (521)
Q Consensus        11 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   90 (521)
                      +|++.+.||+|+||.||.|.+...+ ...+|+|+........                            ...+..|+.+
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~-~~~~a~K~e~~~~~~~----------------------------~~~l~~E~~v   69 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEK-NKEYAKKLEKKELGSK----------------------------PSVLKIEIQV   69 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCC-CeeEEEEEEEecccCC----------------------------CccchhHHHH
Confidence            8999999999999999999998733 4679999976543221                            1136788888


Q ss_pred             HHHHhhccCCCCCccceeEEE-EeCCeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecc
Q 009980           91 MRKIVENVSPHPNVIDLYDVY-EDQNGVHLILELCSGGELFDRIVAQ--ERYMEVGAAAVIRQIAEGLAALHQANIVHRD  167 (521)
Q Consensus        91 l~~l~~~~~~hpniv~~~~~~-~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~al~~lH~~~i~H~d  167 (521)
                      +..+.. ....++++.+++.+ ..+...|+||+.+ |.+|.++....  +.++..++..|+.|++.+|.++|+.|++|||
T Consensus        70 l~~l~~-~~~~~~~~~~~~~G~~~~~~~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRD  147 (322)
T KOG1164|consen   70 LKKLEK-KNGPSHFPKLLDHGRSTEDFNFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRD  147 (322)
T ss_pred             HHHHhh-hcCCCCCCEEEEeccCCCceeEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCC
Confidence            888832 11347999999999 5888999999998 88999987544  5799999999999999999999999999999


Q ss_pred             CCCCcEEEeeCCCC--CCEEEeecCCCccCC--CCC--------C-cccccCCcccccccccccCCCCchhhhHHHHHHH
Q 009980          168 LKPENCLFLNDRED--SPLKIMDFGLSSVEG--YTD--------P-VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVIL  234 (521)
Q Consensus       168 lkp~Nil~~~~~~~--~~~kl~Dfg~a~~~~--~~~--------~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il  234 (521)
                      |||+|++++.....  ..+.|.|||+|+...  ...        . .....||..|.++....+...+++.|+||++.++
T Consensus       148 iKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l  227 (322)
T KOG1164|consen  148 IKPENFVVGQSSRSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYML  227 (322)
T ss_pred             cCHHHeeecCCCCcccceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHH
Confidence            99999999654322  579999999998321  111        1 1234599999999999999999999999999999


Q ss_pred             HHHHhCCCCCCCCCcHHHHHHHHcCCCCCchh-hhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          235 YILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQ-TWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       235 ~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~-~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      .+++.|..||.+.........+.......... .....+.++..+...+-..+...+|....+..
T Consensus       228 ~el~~g~LPW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~  292 (322)
T KOG1164|consen  228 LELLKGSLPWEALEMTDLKSKFEKDPRKLLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAE  292 (322)
T ss_pred             HHHhcCCCCCccccccchHHHHHHHhhhhccccccCCChHHHHHHHHHhhccCCcCCCCHHHHHH
Confidence            99999999997765433222222221111111 22334567777777777788888888777665

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.95  E-value=9.2e-28  Score=223.24  Aligned_cols=252  Identities=22%  Similarity=0.325  Sum_probs=201.3

Q ss_pred             ccceeecccccccCceEEEEeEEccCC---CcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCG---ETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      ..+++....+-+|.||.||.|+.+...   +.+.|-+|.++.....                           ..-..+.
T Consensus       283 r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~---------------------------iQv~~~L  335 (563)
T KOG1024|consen  283 RCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQ---------------------------IQVNLLL  335 (563)
T ss_pred             hhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccH---------------------------HHHHHHH
Confidence            456777788999999999999776421   3355777777543221                           2334566


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEE-eCCeEEEEEeccCCCchHHHHHhc--------CCCCHHHHHHHHHHHHHHHH
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYE-DQNGVHLILELCSGGELFDRIVAQ--------ERYMEVGAAAVIRQIAEGLA  156 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~-~~~~~~lv~e~~~gg~L~~~l~~~--------~~~~~~~~~~i~~qil~al~  156 (521)
                      .|--.+..+     .|||+..+.++.. +....+.++.+..-|+|..++...        ..++..+...++.|+..|+.
T Consensus       336 ~es~lly~~-----sH~nll~V~~V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~  410 (563)
T KOG1024|consen  336 QESMLLYGA-----SHPNLLSVLGVSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAME  410 (563)
T ss_pred             HHHHHHhcC-----cCCCccceeEEEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHH
Confidence            676666666     8999999999874 446778889999889999988722        24677788889999999999


Q ss_pred             HHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCc---ccccCCcccccccccccCCCCchhhhHHHHHH
Q 009980          157 ALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPV---VGLFGSIDYVSPEALLQDRITSKSDMWSLGVI  233 (521)
Q Consensus       157 ~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i  233 (521)
                      |||++||+|.||-..|.++   +..-.+||+|=.+++...+.+-.   ..--.+..|||||.+....|+.++|+|||||+
T Consensus       411 hlh~~~ViHkDiAaRNCvI---dd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVl  487 (563)
T KOG1024|consen  411 HLHNHGVIHKDIAARNCVI---DDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVL  487 (563)
T ss_pred             HHHhcCcccchhhhhccee---hhheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHH
Confidence            9999999999999999999   77789999999999865443311   11123456999999999999999999999999


Q ss_pred             HHHHHh-CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          234 LYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       234 l~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      +|||+| |+.|+..-++.++...+..|..-   ..+-++|.++..++.-||...|++||+++|+..
T Consensus       488 lWELmtlg~~PyaeIDPfEm~~ylkdGyRl---aQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~  550 (563)
T KOG1024|consen  488 LWELMTLGKLPYAEIDPFEMEHYLKDGYRL---AQPFNCPDELFTVMACCWALLPEERPSFSQLVI  550 (563)
T ss_pred             HHHHHhcCCCCccccCHHHHHHHHhcccee---cCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence            999999 99999999999998888877432   122579999999999999999999999999875

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.95  E-value=1.5e-26  Score=202.23  Aligned_cols=252  Identities=23%  Similarity=0.282  Sum_probs=200.4

Q ss_pred             cccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHH
Q 009980            4 ETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDAL   83 (521)
Q Consensus         4 ~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (521)
                      +.-...+.|.++++||.|+||.+|+|....  +|..||||+-.....                              ...
T Consensus         9 ~~~iv~gky~lvrkiGsGSFGdIy~~~~i~--~ge~VAiK~Es~~a~------------------------------hpq   56 (341)
T KOG1163|consen    9 EELIVGGKYKLVRKIGSGSFGDIYLGISIT--SGEEVAIKLESSKAK------------------------------HPQ   56 (341)
T ss_pred             hhheeccceEEEEeecCCchhheeeeeecc--CCceEEEEeecccCC------------------------------Ccc
Confidence            344567899999999999999999999988  889999999643221                              123


Q ss_pred             HHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 009980           84 LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIV-AQERYMEVGAAAVIRQIAEGLAALHQAN  162 (521)
Q Consensus        84 ~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~-~~~~~~~~~~~~i~~qil~al~~lH~~~  162 (521)
                      +..|..+.+.|    ...+.|+.+..++.+..+-.+||+++ |.+|.++.. ...+++..++..++-|++.-+.|+|.++
T Consensus        57 L~yEskvY~iL----~~g~GiP~i~~y~~e~~ynvlVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~  131 (341)
T KOG1163|consen   57 LLYESKVYRIL----QGGVGIPHIRHYGTEKDYNVLVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRN  131 (341)
T ss_pred             hhHHHHHHHHh----ccCCCCchhhhhccccccceeeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhc
Confidence            66677777776    46788999999999999999999998 889999886 3567999999999999999999999999


Q ss_pred             CeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC--------CcccccCCcccccccccccCCCCchhhhHHHHHHH
Q 009980          163 IVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD--------PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVIL  234 (521)
Q Consensus       163 i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il  234 (521)
                      ++||||||+|+|++-......+.++|||+|+......        ......||..|.+-....+...+...|+-|+|.+|
T Consensus       132 fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvL  211 (341)
T KOG1163|consen  132 FIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVL  211 (341)
T ss_pred             cccccCCccceeeccccccceEEEEeccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhccee
Confidence            9999999999999766666789999999998643221        12345699999988777777778899999999999


Q ss_pred             HHHHhCCCCCCCCCc---HHHHHHHHcCCCCCc-hhhhhccCHHHHHHHHHhccCCCCCCCC
Q 009980          235 YILLSGYPPFIAQSN---RQKQQMIMAGEFSFY-EQTWKNISSSAKQLISSLLTVDPNRRPS  292 (521)
Q Consensus       235 ~~ll~g~~pf~~~~~---~~~~~~i~~~~~~~~-~~~~~~~s~~~~~li~~~l~~dp~~R~t  292 (521)
                      .+..-|..||.+...   .+-++.|.....+.+ ....++.|.++.-.+.-|=..--++-|.
T Consensus       212 mYfnrG~LPWQglka~tk~QKyEkI~EkK~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pd  273 (341)
T KOG1163|consen  212 MYFNRGSLPWQGLKAATKKQKYEKISEKKMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPD  273 (341)
T ss_pred             eeeecCCCcccccchhhHHHHHHHHHHhhcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCc
Confidence            999999999987654   344555655554433 4556788999888888876554444444

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.95  E-value=2.4e-26  Score=209.79  Aligned_cols=249  Identities=20%  Similarity=0.293  Sum_probs=199.5

Q ss_pred             cccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      +.-.|+++++||+|+||+.+.|.+.-  ++++||||.-++.                              .....+..|
T Consensus        26 VG~hyrVGkKIGeGsFG~lf~G~Nl~--nne~VAIKfEPrk------------------------------S~APQLrdE   73 (449)
T KOG1165|consen   26 VGPHYRVGKKIGEGSFGVLFLGKNLY--NNEPVAIKFEPRK------------------------------SEAPQLRDE   73 (449)
T ss_pred             ecccceeccccccCcceeeecccccc--cCceEEEEecccc------------------------------CCcchHHHH
Confidence            45589999999999999999999998  8999999985432                              223458889


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQANIVHR  166 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~~~i~H~  166 (521)
                      .+..+.|    ...++|+.+|.+...+.+-.||||++ |.+|.|+..-+ .+|+...++.++.|++.-+.|+|++.+|.|
T Consensus        74 Yr~YKlL----~g~~GIP~vYYFGqeG~~NiLVidLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYR  148 (449)
T KOG1165|consen   74 YRTYKLL----GGTEGIPQVYYFGQEGKYNILVIDLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYR  148 (449)
T ss_pred             HHHHHHH----cCCCCCCceeeeccccchhhhhhhhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeec
Confidence            9999887    47899999999999999999999998 88999988754 569999999999999999999999999999


Q ss_pred             cCCCCcEEEeeCC--CCCCEEEeecCCCccCCCCC--------CcccccCCcccccccccccCCCCchhhhHHHHHHHHH
Q 009980          167 DLKPENCLFLNDR--EDSPLKIMDFGLSSVEGYTD--------PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYI  236 (521)
Q Consensus       167 dlkp~Nil~~~~~--~~~~~kl~Dfg~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~  236 (521)
                      ||||+|+|++...  ....+.|+|||+|+....+.        ...+..||..||+-....+...+...|+=|||-++.+
T Consensus       149 DIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmY  228 (449)
T KOG1165|consen  149 DIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMY  228 (449)
T ss_pred             ccCccceeecCCCCCCCceEEEEeccchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhh
Confidence            9999999996532  33569999999998654332        2345679999999998888889999999999999999


Q ss_pred             HHhCCCCCCCC---CcHHHHHHHHcCCC-CCchhhhhccCHHHHHHHHHhccCCCCCCCCH
Q 009980          237 LLSGYPPFIAQ---SNRQKQQMIMAGEF-SFYEQTWKNISSSAKQLISSLLTVDPNRRPSA  293 (521)
Q Consensus       237 ll~g~~pf~~~---~~~~~~~~i~~~~~-~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~  293 (521)
                      .|-|.+||.+.   +..+.++.|-.... ........++|.++..-+.-.=..+=.+-|..
T Consensus       229 FLRGsLPWQGLKA~tnK~kYeKIGe~Kr~T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDY  289 (449)
T KOG1165|consen  229 FLRGSLPWQGLKADTNKEKYEKIGETKRSTPIEVLCEGFPEEFATYLRYVRRLDFFETPDY  289 (449)
T ss_pred             hccCCCccccccCcchHHHHHHhccccccCCHHHHHhcCHHHHHHHHHHHHhcCcccCCCH
Confidence            99999999764   45556666654433 33344556677776655555444444455553

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.94  E-value=5.2e-25  Score=217.60  Aligned_cols=255  Identities=33%  Similarity=0.522  Sum_probs=205.9

Q ss_pred             eeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHH
Q 009980           12 YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVM   91 (521)
Q Consensus        12 Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l   91 (521)
                      |.+.+.||.|+||.||.+.+.     ..+|+|.+.......                         ......+.+|+.++
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~-----~~~~~k~~~~~~~~~-------------------------~~~~~~~~~e~~~~   51 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR-----KLVALKVLAKKLESK-------------------------SKEVERFLREIQIL   51 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec-----cEEEEEeechhhccc-------------------------hhHHHHHHHHHHHH
Confidence            788999999999999999886     568999987543321                         01245688889988


Q ss_pred             HHHhhccCCCC-CccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCCeecc
Q 009980           92 RKIVENVSPHP-NVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE---RYMEVGAAAVIRQIAEGLAALHQANIVHRD  167 (521)
Q Consensus        92 ~~l~~~~~~hp-niv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~---~~~~~~~~~i~~qil~al~~lH~~~i~H~d  167 (521)
                      ..+     .|+ +|+++.+.+......+++++++.|+++.+.+....   .+++..+..++.|++.++.|+|+.|++|||
T Consensus        52 ~~~-----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd  126 (384)
T COG0515          52 ASL-----NHPPNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRD  126 (384)
T ss_pred             HHc-----cCCcceeeEEEEEecCCEEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccC
Confidence            888     777 79999999988888999999999999997777664   799999999999999999999999999999


Q ss_pred             CCCCcEEEeeCCCCC-CEEEeecCCCccCCCCC-------CcccccCCccccccccccc---CCCCchhhhHHHHHHHHH
Q 009980          168 LKPENCLFLNDREDS-PLKIMDFGLSSVEGYTD-------PVVGLFGSIDYVSPEALLQ---DRITSKSDMWSLGVILYI  236 (521)
Q Consensus       168 lkp~Nil~~~~~~~~-~~kl~Dfg~a~~~~~~~-------~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwslG~il~~  236 (521)
                      +||+||++   +... .++++|||.+.......       ......||+.|+|||.+.+   ..+....|+||+|+++++
T Consensus       127 ~kp~nil~---~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~  203 (384)
T COG0515         127 IKPENILL---DRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYE  203 (384)
T ss_pred             CCHHHeee---cCCCCeEEEeccCcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHH
Confidence            99999999   5555 69999999997543322       2356679999999999987   578899999999999999


Q ss_pred             HHhCCCCCCCCCc----HHHHHHHHcCCCC-Cchhhhhcc----CHHHHHHHHHhccCCCCCCCCHHHHHcCCcccC
Q 009980          237 LLSGYPPFIAQSN----RQKQQMIMAGEFS-FYEQTWKNI----SSSAKQLISSLLTVDPNRRPSAQELLNHPWVIG  304 (521)
Q Consensus       237 ll~g~~pf~~~~~----~~~~~~i~~~~~~-~~~~~~~~~----s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~  304 (521)
                      +++|..||.....    ......+...... .........    ...+.+++.+++..+|..|.+..+...++|...
T Consensus       204 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~  280 (384)
T COG0515         204 LLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAH  280 (384)
T ss_pred             HHhCCCCCCCCCccccHHHHHHHHHhcCCcccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhchHhhC
Confidence            9999999877764    4444444444433 222111111    257899999999999999999999999876654

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.93  E-value=1.1e-25  Score=219.88  Aligned_cols=173  Identities=24%  Similarity=0.262  Sum_probs=131.3

Q ss_pred             ccccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHH
Q 009980            3 QETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDA   82 (521)
Q Consensus         3 ~~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (521)
                      .+.+.+.++|.+.+.||+|+||+||+|+++.. +++.||||.+.......                       .......
T Consensus        11 ~~~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~-~~~~vAiK~~~~~~~~~-----------------------~~~~~~~   66 (365)
T PRK09188         11 DQIPALSARFVETAVLKRDVFSTVERGYFAGD-PGTARAVRRRVSEVPWW-----------------------SKPLARH   66 (365)
T ss_pred             cccccccCCceEccEEeecCcEEEEEEEEcCC-CCeEEEEEEeccccccc-----------------------ccHHHHH
Confidence            45677889999999999999999999998752 45668999874221100                       0011234


Q ss_pred             HHHHHHHHHHHHhhccCCCCCccc-eeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Q 009980           83 LLTNEILVMRKIVENVSPHPNVID-LYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQA  161 (521)
Q Consensus        83 ~~~~E~~~l~~l~~~~~~hpniv~-~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~  161 (521)
                      .+.+|+.+++++     .||||++ +++    .+..|+|||||+|++|.. +..   ..   ...++.|++.||.|||++
T Consensus        67 ~~~~E~~iL~~L-----~h~~iv~~l~~----~~~~~LVmE~~~G~~L~~-~~~---~~---~~~~~~~i~~aL~~lH~~  130 (365)
T PRK09188         67 LAAREIRALKTV-----RGIGVVPQLLA----TGKDGLVRGWTEGVPLHL-ARP---HG---DPAWFRSAHRALRDLHRA  130 (365)
T ss_pred             HHHHHHHHHHhc-----cCCCCCcEEEE----cCCcEEEEEccCCCCHHH-hCc---cc---hHHHHHHHHHHHHHHHHC
Confidence            588999999999     9999985 443    246899999999999963 211   11   256889999999999999


Q ss_pred             CCeeccC-CCCcEEEeeCCCCCCEEEeecCCCccCCCCCC---------cccccCCccccccccccc
Q 009980          162 NIVHRDL-KPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---------VVGLFGSIDYVSPEALLQ  218 (521)
Q Consensus       162 ~i~H~dl-kp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---------~~~~~gt~~y~aPE~~~~  218 (521)
                      ||+|||| ||+|||+   +.++.+||+|||+|+.......         .....+++.|+|||.+..
T Consensus       131 gIiHrDL~KP~NILv---~~~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~  194 (365)
T PRK09188        131 GITHNDLAKPQNWLM---GPDGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTP  194 (365)
T ss_pred             CCeeCCCCCcceEEE---cCCCCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence            9999999 9999999   6667899999999986543221         134568888999998864

>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]

Probab=99.93  E-value=2.9e-25  Score=186.27  Aligned_cols=149  Identities=23%  Similarity=0.464  Sum_probs=139.0

Q ss_pred             hhccCCCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhcc-
Q 009980          353 LLGSHDLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLR-  430 (521)
Q Consensus       353 l~~~~~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~-  430 (521)
                      +.....++++++++|++.|..+|+|++| |+..||..+|+.+|.+++..++.++|..+|. +.|.|+|.+|+.+|.... 
T Consensus         8 ~~~~~~~t~~qi~~lkeaF~l~D~d~~G~I~~~el~~ilr~lg~~~s~~ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~~   86 (160)
T COG5126           8 LLTFTQLTEEQIQELKEAFQLFDRDSDGLIDRNELGKILRSLGFNPSEAEINKLFEEIDA-GNETVDFPEFLTVMSVKLK   86 (160)
T ss_pred             hhhcccCCHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHcCCCCcHHHHHHHHHhccC-CCCccCHHHHHHHHHHHhc
Confidence            4556779999999999999999999999 9999999999999999999999999999999 999999999999998744 


Q ss_pred             CCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhcCc
Q 009980          431 KSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDS  508 (521)
Q Consensus       431 ~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~~~  508 (521)
                      ...++++++++|+.||+|++|+|+.+|++.++..++..      .++++++.+++.+|.|+||.|+|++|++.+...+
T Consensus        87 ~~~~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~lge~------~~deev~~ll~~~d~d~dG~i~~~eF~~~~~~~~  158 (160)
T COG5126          87 RGDKEEELREAFKLFDKDHDGYISIGELRRVLKSLGER------LSDEEVEKLLKEYDEDGDGEIDYEEFKKLIKDSP  158 (160)
T ss_pred             cCCcHHHHHHHHHHhCCCCCceecHHHHHHHHHhhccc------CCHHHHHHHHHhcCCCCCceEeHHHHHHHHhccC
Confidence            66678999999999999999999999999999998876      7889999999999999999999999999887644

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.93  E-value=2.8e-27  Score=234.31  Aligned_cols=245  Identities=26%  Similarity=0.413  Sum_probs=203.8

Q ss_pred             cccccCceEEEEeEEccC-CCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHHh
Q 009980           17 ILGRGGFSVVRRGIKKTC-GETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIV   95 (521)
Q Consensus        17 ~lG~G~~g~V~~a~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~   95 (521)
                      ++|.|+||.|++++.... ..+..||+|+.++.......                          ......|-.++..+ 
T Consensus         1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~--------------------------~~~t~~er~il~~~-   53 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRD--------------------------RTHTKQERIILAFV-   53 (612)
T ss_pred             CCCcCCCcchHHHHHhccccccchhhhhccccccccccc--------------------------ccccccHHHHHhhc-
Confidence            479999999988754321 15678999998775433210                          00122344444444 


Q ss_pred             hccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q 009980           96 ENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLF  175 (521)
Q Consensus        96 ~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~  175 (521)
                         ..||.+++++..++.+...|+++++..||.|..++.....+.+...+.+...++-|+.++|+.||+|||+|++||++
T Consensus        54 ---~~~~f~v~lhyafqt~~kl~l~ld~~rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enill  130 (612)
T KOG0603|consen   54 ---HNTPFLVKLHYAFQTDGKLYLILDFLRGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLL  130 (612)
T ss_pred             ---cCCCceeeeeeeeccccchhHhhhhcccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceee
Confidence               36999999999999999999999999999999999998899999999999999999999999999999999999999


Q ss_pred             eeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCcHHHHHH
Q 009980          176 LNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQM  255 (521)
Q Consensus       176 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~  255 (521)
                         +..|.+++.|||+++........   |||..|||||++.  .+...+|.||+|+++++|+||..||.+    +....
T Consensus       131 ---d~~Ghi~~tdfglske~v~~~~~---cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~  198 (612)
T KOG0603|consen  131 ---LLEGHIKLTDFGLSKEAVKEKIA---CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKR  198 (612)
T ss_pred             ---cccCccccCCchhhhHhHhhhhc---ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch----HHHHH
Confidence               89999999999999865433322   8999999999997  678899999999999999999999987    77788


Q ss_pred             HHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCC-----HHHHHcCCcccCCCC
Q 009980          256 IMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPS-----AQELLNHPWVIGDSA  307 (521)
Q Consensus       256 i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t-----~~~~l~h~~~~~~~~  307 (521)
                      |....+..+.    .++..+++++..++..+|..|..     +.++++|++|+....
T Consensus       199 Il~~~~~~p~----~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i~~  251 (612)
T KOG0603|consen  199 ILKAELEMPR----ELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSIDW  251 (612)
T ss_pred             HhhhccCCch----hhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchheeeeH
Confidence            8887777764    46889999999999999999965     589999999986443

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.92  E-value=1.2e-24  Score=203.12  Aligned_cols=193  Identities=23%  Similarity=0.374  Sum_probs=147.3

Q ss_pred             CCCCCccceeEEEEe---------------------------CCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHH
Q 009980           99 SPHPNVIDLYDVYED---------------------------QNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI  151 (521)
Q Consensus        99 ~~hpniv~~~~~~~~---------------------------~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi  151 (521)
                      .+|||||++..+|.+                           +..+|+||..++. +|.+++..+ ..+....+-++.|+
T Consensus       273 a~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~-~~s~r~~~~~laQl  350 (598)
T KOG4158|consen  273 AKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTR-HRSYRTGRVILAQL  350 (598)
T ss_pred             CCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcC-CCchHHHHHHHHHH
Confidence            589999999988743                           3568999998865 999988764 46788899999999


Q ss_pred             HHHHHHHHHCCCeeccCCCCcEEEeeC-CCCCCEEEeecCCCccC-------CCCCCcccccCCcccccccccccCCC--
Q 009980          152 AEGLAALHQANIVHRDLKPENCLFLND-REDSPLKIMDFGLSSVE-------GYTDPVVGLFGSIDYVSPEALLQDRI--  221 (521)
Q Consensus       152 l~al~~lH~~~i~H~dlkp~Nil~~~~-~~~~~~kl~Dfg~a~~~-------~~~~~~~~~~gt~~y~aPE~~~~~~~--  221 (521)
                      ++|+.|||.+||.|||+|.+|||+.-+ +.-..+.++|||++--.       .+.+.....-|.-..||||+....+-  
T Consensus       351 LEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~  430 (598)
T KOG4158|consen  351 LEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPN  430 (598)
T ss_pred             HHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCCc
Confidence            999999999999999999999999543 44467899999987432       22223334457888999999874321  


Q ss_pred             ----CchhhhHHHHHHHHHHHhCCCCCCCCCcHHH-HHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHH
Q 009980          222 ----TSKSDMWSLGVILYILLSGYPPFIAQSNRQK-QQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL  296 (521)
Q Consensus       222 ----~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~  296 (521)
                          -.++|.|++|.+.||+++...||.+...... .......+.+.   ..+.+++.+++++..+|+.||++|+++.-+
T Consensus       431 avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qLPa---lp~~vpp~~rqlV~~lL~r~pskRvsp~iA  507 (598)
T KOG4158|consen  431 AVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQLPA---LPSRVPPVARQLVFDLLKRDPSKRVSPNIA  507 (598)
T ss_pred             eeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhhCCC---CcccCChHHHHHHHHHhcCCccccCCccHH
Confidence                2479999999999999999999987443221 11122222222   236689999999999999999999986433

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.92  E-value=1.9e-25  Score=231.72  Aligned_cols=226  Identities=24%  Similarity=0.387  Sum_probs=181.7

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      .....+|+.++.|-.|+||.||.++|+.  +.+.+|+|+ ++....                                ++
T Consensus        79 ~p~e~df~~IklisngAygavylvrh~~--trqrfa~ki-Nkq~li--------------------------------lR  123 (1205)
T KOG0606|consen   79 APSESDFNTIKLISNGAYGAVYLVRHKE--TRQRFAMKI-NKQNLI--------------------------------LR  123 (1205)
T ss_pred             CCCccccceeEeeccCCCCceeeeeccc--cccchhhcc-cccchh--------------------------------hh
Confidence            4567899999999999999999999998  778899954 332210                                11


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      +   ++..     ...|.+|                     |+-...+..-+.++...        +.+++|||+.||+|
T Consensus       124 n---ilt~-----a~npfvv---------------------gDc~tllk~~g~lPvdm--------vla~Eylh~ygivh  166 (1205)
T KOG0606|consen  124 N---ILTF-----AGNPFVV---------------------GDCATLLKNIGPLPVDM--------VLAVEYLHSYGIVH  166 (1205)
T ss_pred             c---cccc-----cCCccee---------------------chhhhhcccCCCCcchh--------hHHhHhhccCCeec
Confidence            1   1111     2566655                     34444555556666544        67899999999999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC----------------CcccccCCcccccccccccCCCCchhhhHH
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD----------------PVVGLFGSIDYVSPEALLQDRITSKSDMWS  229 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~~~~~~~~Diws  229 (521)
                      ||+||+|.++   ..-+.+|++|||+++...-..                .....||||.|+|||++..+.|+..+|+|+
T Consensus       167 rdlkpdnllI---T~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwa  243 (1205)
T KOG0606|consen  167 RDLKPDNLLI---TSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWA  243 (1205)
T ss_pred             CCCCCCccee---eecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHH
Confidence            9999999999   888999999999986521110                112458999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCC---CCHHHHHcCCcccCCC
Q 009980          230 LGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR---PSAQELLNHPWVIGDS  306 (521)
Q Consensus       230 lG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R---~t~~~~l~h~~~~~~~  306 (521)
                      +|+|+|+.+.|..||.+.+.++++..+......++... ..++++++++|.++|..+|..|   +.+-++.+|+||+.-.
T Consensus       244 mGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~d-ea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~LD  322 (1205)
T KOG0606|consen  244 MGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEED-EALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLLD  322 (1205)
T ss_pred             HHHHHHHHheeeeeccCCCHHHHHhhhhhhhccccccC-cCCCHHHHHHHHHHHHhChHhhcccchhhhhhhccceeecc
Confidence            99999999999999999999999999999988888774 5589999999999999999999   5677888999998654


Q ss_pred             C
Q 009980          307 A  307 (521)
Q Consensus       307 ~  307 (521)
                      .
T Consensus       323 w  323 (1205)
T KOG0606|consen  323 W  323 (1205)
T ss_pred             c
Confidence            4

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.91  E-value=3.3e-25  Score=230.12  Aligned_cols=247  Identities=21%  Similarity=0.305  Sum_probs=184.8

Q ss_pred             ceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHH
Q 009980           11 EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILV   90 (521)
Q Consensus        11 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   90 (521)
                      +|...+.||++.|=+|.+|+++.   |. |+||++-+....-+                         +  ..+.+++.-
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~e---G~-vVvKVFvk~~p~~s-------------------------L--~~~~qrL~~   72 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDRE---GL-VVVKVFVKQDPTIS-------------------------L--RPFKQRLEE   72 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCC---ce-EEEEEEeccCCCCC-------------------------c--hHHHHHHHH
Confidence            68889999999999999999874   54 99999976543221                         1  113333333


Q ss_pred             HHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCC
Q 009980           91 MRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKP  170 (521)
Q Consensus        91 l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp  170 (521)
                      ++.   .+.+|||++++.-+-+.+...|||-+|+.. +|+|++..++.+...+.+.|+.||+.||..||..||+|||||.
T Consensus        73 ik~---~l~~~pn~lPfqk~~~t~kAAylvRqyvkh-nLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKs  148 (1431)
T KOG1240|consen   73 IKF---ALMKAPNCLPFQKVLVTDKAAYLVRQYVKH-NLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKS  148 (1431)
T ss_pred             HHH---HhhcCCcccchHHHHHhhHHHHHHHHHHhh-hhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCcccccccc
Confidence            331   123899999999998889999999999966 9999999999999999999999999999999999999999999


Q ss_pred             CcEEEeeCCCCCCEEEeecCCCccC--CCCCC--cc----cccCCcccccccccccC----------C-CCchhhhHHHH
Q 009980          171 ENCLFLNDREDSPLKIMDFGLSSVE--GYTDP--VV----GLFGSIDYVSPEALLQD----------R-ITSKSDMWSLG  231 (521)
Q Consensus       171 ~Nil~~~~~~~~~~kl~Dfg~a~~~--~~~~~--~~----~~~gt~~y~aPE~~~~~----------~-~~~~~DiwslG  231 (521)
                      +|||+   .+-+++.|+||..-+..  .+.++  ..    +...-.+|+|||.+...          + .+++.||||+|
T Consensus       149 ENILi---TSWNW~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~G  225 (1431)
T KOG1240|consen  149 ENILI---TSWNWLYLTDFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAG  225 (1431)
T ss_pred             ceEEE---eeechhhhhcccccCCccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhh
Confidence            99999   78899999999866431  11111  11    11233569999988642          2 56789999999


Q ss_pred             HHHHHHHh-CCCCCCCCCcHHHHHHHHcCCCCCchhhhhc-cCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          232 VILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKN-ISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       232 ~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~-~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      |+++||++ |.|||.-.    .+-...++.-..+...... -+..++++|..|++.||++|.+|++.|+.
T Consensus       226 CViaELf~Eg~PlF~LS----QL~aYr~~~~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~  291 (1431)
T KOG1240|consen  226 CVIAELFLEGRPLFTLS----QLLAYRSGNADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQK  291 (1431)
T ss_pred             HHHHHHHhcCCCcccHH----HHHhHhccCccCHHHHHHhCcCccHHHHHHHHHccCchhccCHHHHHHh
Confidence            99999988 79998321    1112223321122222222 24478999999999999999999999975

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.90  E-value=8.6e-24  Score=191.90  Aligned_cols=180  Identities=18%  Similarity=0.180  Sum_probs=132.9

Q ss_pred             cccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      +.++|++.++||.|+||.||++..    ++..+|||++.......+.                   ..+.......+.+|
T Consensus        29 l~~~y~~~~~l~~~~f~~v~l~~~----~~~~~iiKvf~~~~~~~~~-------------------~~~~f~~g~~~e~E   85 (232)
T PRK10359         29 LSYNIKTIKVFRNIDDTKVSLIDT----DYGKYILKVFAPKVKRTER-------------------FLKSFVKGDYYENL   85 (232)
T ss_pred             hhCceEEEEEecCCCceEEEEEec----CCCcEEEEEechhcCchHH-------------------HHHhhhhhHHHHHH
Confidence            578999999999999999999654    3457999998654322110                   00000012336889


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEeC--------CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYEDQ--------NGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALH  159 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~~--------~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH  159 (521)
                      +..+.++     .||+|+.+.+++...        +..+|||||++|.+|.+..    .+++    ....+++.++..||
T Consensus        86 a~~l~rL-----~~~GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~----~~~~----~~~~~i~~~l~~lH  152 (232)
T PRK10359         86 IVQTDRV-----RSEGLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMP----EISE----DVKAKIKASIESLH  152 (232)
T ss_pred             HHHHHHH-----HHCCCCcceEeeeecccccccccCCeEEEEEEECCccHHHhh----hccH----HHHHHHHHHHHHHH
Confidence            9999999     999999999987644        3588999999999997763    2333    34669999999999


Q ss_pred             HCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHH
Q 009980          160 QANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILL  238 (521)
Q Consensus       160 ~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll  238 (521)
                      ..|++|||+||+||++   +.++ ++|+|||.+.........           ...+....|+.++|+||||+++..+.
T Consensus       153 ~~gi~H~Dikp~Nili---~~~g-i~liDfg~~~~~~e~~a~-----------d~~vler~y~~~~di~~lg~~~~~~~  216 (232)
T PRK10359        153 QHGMVSGDPHKGNFIV---SKNG-LRIIDLSGKRCTAQRKAK-----------DRIDLERHYGIKNEIKDLGYYLLIYK  216 (232)
T ss_pred             HcCCccCCCChHHEEE---eCCC-EEEEECCCcccccchhhH-----------HHHHHHhHhcccccccceeEeehHHH
Confidence            9999999999999999   4555 999999988754322111           11334456778999999999876553

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.90  E-value=3.2e-23  Score=186.47  Aligned_cols=162  Identities=15%  Similarity=0.123  Sum_probs=112.6

Q ss_pred             cccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccc----cccccccccHHHHHHHHHH
Q 009980           15 TDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFF----PTRKQVSVSDALLTNEILV   90 (521)
Q Consensus        15 ~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~E~~~   90 (521)
                      .+.||+|++|.||+|.+.   +|+.||||+++.........    ......  ...+    ...............|+.+
T Consensus         2 ~~~ig~G~~~~Vy~a~~~---~g~~vAvKv~~~~~~~~~~~----~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~E~~~   72 (190)
T cd05147           2 NGCISTGKEANVYHATTA---NGEERAIKIYKTSILVFKDR----DRYVSG--EFRFRHGYCKSNPRKMVRTWAEKEMRN   72 (190)
T ss_pred             CCccccccceEEEEEECC---CCCEEEEEEEEecccccccH----HHhhcC--CchhhccccCCCHHHHHHHHHHHHHHH
Confidence            578999999999999985   68899999998643211000    000000  0000    0000111122345679999


Q ss_pred             HHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHH-HHCCCeeccCC
Q 009980           91 MRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAAL-HQANIVHRDLK  169 (521)
Q Consensus        91 l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~l-H~~~i~H~dlk  169 (521)
                      +.++     .++++.....+.. .. .+|||||+.|+++.......+.+++..+..++.|++.+|.|+ |+.||+|||||
T Consensus        73 l~~l-----~~~~v~~p~~~~~-~~-~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlk  145 (190)
T cd05147          73 LKRL-----VTAGIPCPEPILL-KS-HVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLS  145 (190)
T ss_pred             HHHH-----HHCCCCCCcEEEe-cC-CEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence            9999     5666543333222 22 389999999988766555567899999999999999999999 79999999999


Q ss_pred             CCcEEEeeCCCCCCEEEeecCCCccCC
Q 009980          170 PENCLFLNDREDSPLKIMDFGLSSVEG  196 (521)
Q Consensus       170 p~Nil~~~~~~~~~~kl~Dfg~a~~~~  196 (521)
                      |+|||+   + ++.++|+|||+|....
T Consensus       146 P~NIli---~-~~~v~LiDFG~a~~~~  168 (190)
T cd05147         146 EYNLLY---H-DGKLYIIDVSQSVEHD  168 (190)
T ss_pred             HHHEEE---E-CCcEEEEEccccccCC
Confidence            999999   3 3679999999997543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]

Probab=99.90  E-value=1.3e-22  Score=175.51  Aligned_cols=142  Identities=27%  Similarity=0.465  Sum_probs=131.0

Q ss_pred             CCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCC----
Q 009980          359 LNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQ----  433 (521)
Q Consensus       359 ~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~----  433 (521)
                      ++..++.+++.+|+.+|.+++| |+..||..+++.+|..++..++..+++.+|.|++|.|++.||+.++.......    
T Consensus         2 ~~~~~~~el~~~F~~fD~d~~G~i~~~el~~~lr~lg~~~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~~~   81 (151)
T KOG0027|consen    2 LSEEQILELKEAFQLFDKDGDGKISVEELGAVLRSLGQNPTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTDEE   81 (151)
T ss_pred             CCHHHHHHHHHHHHHHCCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhccccccc
Confidence            4677889999999999999999 99999999999999999999999999999999999999999999998754332    


Q ss_pred             -cHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          434 -GDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       434 -~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                       ..++++.+|+.||.|++|+||.+||+.++..++.+      .+.++++.+++.+|.|+||.|+|+||+++|..
T Consensus        82 ~~~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg~~------~~~~e~~~mi~~~d~d~dg~i~f~ef~~~m~~  149 (151)
T KOG0027|consen   82 ASSEELKEAFRVFDKDGDGFISASELKKVLTSLGEK------LTDEECKEMIREVDVDGDGKVNFEEFVKMMSG  149 (151)
T ss_pred             ccHHHHHHHHHHHccCCCCcCcHHHHHHHHHHhCCc------CCHHHHHHHHHhcCCCCCCeEeHHHHHHHHhc
Confidence             24589999999999999999999999999999887      66789999999999999999999999999875

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.88  E-value=5.4e-22  Score=179.31  Aligned_cols=163  Identities=16%  Similarity=0.126  Sum_probs=115.0

Q ss_pred             ecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccc----cccccccHHHHHHHHH
Q 009980           14 VTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPT----RKQVSVSDALLTNEIL   89 (521)
Q Consensus        14 ~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~E~~   89 (521)
                      +.+.||+|++|.||+|.+.   +|+.||||+++..........   . ... . ...+..    .............|..
T Consensus         1 ~~~~ig~G~~~~Vy~a~~~---~g~~vavKv~~~~~~~~~~~~---~-~~~-~-~~~~~~~~~~~~~~~~~~~~~~~E~~   71 (190)
T cd05145           1 INGCISTGKEANVYHARTG---DGEELAVKIYKTSTLSFKDRD---K-YIE-G-DPRFRSRYSKSNPRKLVFAWAEKEFR   71 (190)
T ss_pred             CCceeecCCCcEEEEEEcC---CCCEEEEEEEEcCcceEeeHH---H-Hhc-C-CcccccccccCCHHHHHHHHHHHHHH
Confidence            4678999999999999876   578999999986522100000   0 000 0 000000    0000111233467999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeccC
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ-ANIVHRDL  168 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~-~~i~H~dl  168 (521)
                      .+.++     .|++|.....+....  .||||||++|+++.........+++.++..++.|++.++.++|+ +||+||||
T Consensus        72 ~l~~l-----~~~~i~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDl  144 (190)
T cd05145          72 NLKRL-----YEAGVPVPEPILLKK--NVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDL  144 (190)
T ss_pred             HHHHH-----HhCCCCCceEEEecC--CEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCC
Confidence            99999     788875555444332  48999999998665544455678899999999999999999999 99999999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCccCC
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSSVEG  196 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~  196 (521)
                      ||+||++   + ++.++|+|||+|+...
T Consensus       145 kP~NIll---~-~~~~~liDFG~a~~~~  168 (190)
T cd05145         145 SEYNILY---H-DGKPYIIDVSQAVELD  168 (190)
T ss_pred             ChhhEEE---E-CCCEEEEEcccceecC
Confidence            9999999   4 5789999999998654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.88  E-value=8.7e-23  Score=190.92  Aligned_cols=240  Identities=23%  Similarity=0.302  Sum_probs=146.0

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ..+..++.||.|++|.||.+.+..  +++.+|+|++.......                         ...-..+++|..
T Consensus        12 r~l~~~~~i~~g~~~~v~~v~d~~--t~~~~avkvf~~~~~~~-------------------------~~~~~~~~~e~l   64 (288)
T PF14531_consen   12 RTLVRGRIIGKGGFSIVFEVTDVE--TGEEFAVKVFLLPADAS-------------------------ANEYEQLKEEQL   64 (288)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETT--TTEEEEEEEEEESSTTH-------------------------TTHHHHHHHHHH
T ss_pred             eEEEEccccccCCceEEEEEEEcc--CCceEEEEEEecccccc-------------------------hHHHHHHHHHHH
Confidence            356678899999999999999998  89999999986433110                         011223344433


Q ss_pred             HHHHHhhc-----cCCCCCccceeEEEE---------eC---C-----eEEEEEeccCCCchHHHHH---hcCCC--CH-
Q 009980           90 VMRKIVEN-----VSPHPNVIDLYDVYE---------DQ---N-----GVHLILELCSGGELFDRIV---AQERY--ME-  141 (521)
Q Consensus        90 ~l~~l~~~-----~~~hpniv~~~~~~~---------~~---~-----~~~lv~e~~~gg~L~~~l~---~~~~~--~~-  141 (521)
                      ....+..-     ...|-.++..++...         ..   +     ..+++|+-+.+ +|.+.+.   .....  .. 
T Consensus        65 ~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~-dL~~~~~~l~~~~~~~~~l~  143 (288)
T PF14531_consen   65 AITLFPGVKNPKEAYRHLRFLVPLDLLRIPGKPPFFERGPGQSIYWVLNRFLLMPRAQG-DLQDLVEALFSRAQTHSPLA  143 (288)
T ss_dssp             GGGGSTT--SHHHHHHHH-B---SEEEEETTS-SEEEECETTEEEEEESEEEEEE--SE-EHHHHHHHHHHHTTTSHHHH
T ss_pred             HhhhhccCCCHHHHHHhceEEeeeEEEEEcCCCcceecCCCCccceeehhhhccchhhh-cHHHHHHHHhhcccccchhH
Confidence            22221000     001222333333322         11   1     23678888855 8877654   22222  11 


Q ss_pred             HHH-HHHHHHHHHHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccC-
Q 009980          142 VGA-AAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQD-  219 (521)
Q Consensus       142 ~~~-~~i~~qil~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-  219 (521)
                      ..+ ..+..|++..+++||+.|++|+||+|+|+++   +.+|.++|+||+.....+.....  ...+..|.|||..... 
T Consensus       144 ~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~~~nfll---~~~G~v~Lg~F~~~~r~g~~~~~--~~~~~~~~PPe~~~~~~  218 (288)
T PF14531_consen  144 FAARLSLTVQMIRLVANLHSYGLVHGDIKPENFLL---DQDGGVFLGDFSSLVRAGTRYRC--SEFPVAFTPPELESCAG  218 (288)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEE----TTS-EEE--GGGEEETTEEEEG--GGS-TTTS-HHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHhhcceEecccceeeEEE---cCCCCEEEcChHHHeecCceeec--cCCCcccCChhhhhhhc
Confidence            122 3455899999999999999999999999999   88899999999887665432222  3456779999977432 


Q ss_pred             -------CCCchhhhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCC
Q 009980          220 -------RITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR  290 (521)
Q Consensus       220 -------~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R  290 (521)
                             .++.+.|.|+||+++|.|.+|..||...........        .-....++|..++.||..+|..||.+|
T Consensus       219 ~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~--------~f~~C~~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  219 QFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPEW--------DFSRCRDMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             SCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGG--------GGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred             ccCcccceeeeccCHHHHHHHHHHHHHccCCCCCCCccccccc--------cchhcCCcCHHHHHHHHHHccCCcccC
Confidence                   478899999999999999999999976543321111        111223689999999999999999987

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.88  E-value=6.1e-22  Score=175.75  Aligned_cols=191  Identities=19%  Similarity=0.198  Sum_probs=139.7

Q ss_pred             eecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHH
Q 009980           13 EVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMR   92 (521)
Q Consensus        13 ~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   92 (521)
                      .+...|++|+||+|+++..    .+.+++.+.+.-.....                        .......+.+|+++|+
T Consensus         5 ~~~~~l~~~~f~~v~~~~~----~~~k~~~~~l~~~~~~~------------------------~~~~~~l~~rE~~iL~   56 (218)
T PRK12274          5 AVNEPLKSDTFGRILLVRG----GERKFVRRDLSAAPWWL------------------------RGVAWWLARREALALR   56 (218)
T ss_pred             ccceeecCCCcceEEEeec----CCceeeecccccchhhh------------------------hhHHHHHHHHHHHHHH
Confidence            3577899999999997755    35567766654221100                        0012235789999999


Q ss_pred             HHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC-CCC
Q 009980           93 KIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDL-KPE  171 (521)
Q Consensus        93 ~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dl-kp~  171 (521)
                      +|    .+||+|++++++    +..|++|||+.|.+|.+.+..       ....++.|++.+|.++|++||+|||| ||+
T Consensus        57 ~L----~~~~~vP~ll~~----~~~~lvmeyI~G~~L~~~~~~-------~~~~~~~qi~~~L~~lH~~GIvHrDL~kp~  121 (218)
T PRK12274         57 QL----DGLPRTPRLLHW----DGRHLDRSYLAGAAMYQRPPR-------GDLAYFRAARRLLQQLHRCGVAHNDLAKEA  121 (218)
T ss_pred             hc----CCCCCCCEEEEE----cCEEEEEeeecCccHHhhhhh-------hhHHHHHHHHHHHHHHHHCcCccCCCCCcc
Confidence            98    356889999886    457999999999998654321       12357889999999999999999999 799


Q ss_pred             cEEEeeCCCCCCEEEeecCCCccCCCCCCc--------------ccccCCcccccccccccC-CCC-chhhhHHHHHHHH
Q 009980          172 NCLFLNDREDSPLKIMDFGLSSVEGYTDPV--------------VGLFGSIDYVSPEALLQD-RIT-SKSDMWSLGVILY  235 (521)
Q Consensus       172 Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~--------------~~~~gt~~y~aPE~~~~~-~~~-~~~DiwslG~il~  235 (521)
                      |||+   +.++.++|+|||+|.........              .....++.|++|+...-- ..+ ...+.++.|+-+|
T Consensus       122 NILv---~~~g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~  198 (218)
T PRK12274        122 NWLV---QEDGSPAVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVY  198 (218)
T ss_pred             eEEE---cCCCCEEEEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHH
Confidence            9999   66778999999999865443321              011257788888754321 233 5679999999999


Q ss_pred             HHHhCCCCCCCCCc
Q 009980          236 ILLSGYPPFIAQSN  249 (521)
Q Consensus       236 ~ll~g~~pf~~~~~  249 (521)
                      .++|+..|+.+.++
T Consensus       199 ~~~~~~~~~~~~~~  212 (218)
T PRK12274        199 RFVTRRVLHWEDNE  212 (218)
T ss_pred             HHHhccCCccccCC
Confidence            99999999876543

>PRK10345 hypothetical protein; Provisional

Probab=99.86  E-value=7.1e-21  Score=172.61  Aligned_cols=143  Identities=20%  Similarity=0.190  Sum_probs=108.8

Q ss_pred             ecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHH
Q 009980           14 VTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRK   93 (521)
Q Consensus        14 ~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~   93 (521)
                      -.+.||+|+||.||.  ++.  ++.. +||++.....                            .....+.+|+.+++.
T Consensus         6 ~~~~LG~G~~~~Vy~--hp~--~~~k-~IKv~~~~~~----------------------------~~~~~~~rEi~~l~~   52 (210)
T PRK10345          6 EQSPLGTGRHRKCYA--HPE--DAQR-CIKIVYHRGD----------------------------GGDKEIRRELKYYAH   52 (210)
T ss_pred             CcceecCCCceEEEE--CCC--CcCe-EEEEEecccc----------------------------chHHHHHHHHHHHHH
Confidence            357899999999995  665  4444 7998864221                            123458999999999


Q ss_pred             HhhccCCCCCccceeEEEEeCC---eEE-EEEec--cCCCchHHHHHhcCCCCHHHHHHHHHHHHHHH-HHHHHCCCeec
Q 009980           94 IVENVSPHPNVIDLYDVYEDQN---GVH-LILEL--CSGGELFDRIVAQERYMEVGAAAVIRQIAEGL-AALHQANIVHR  166 (521)
Q Consensus        94 l~~~~~~hpniv~~~~~~~~~~---~~~-lv~e~--~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al-~~lH~~~i~H~  166 (521)
                      +......||||++++++++++.   .++ +||||  +.+|+|.+++.. +.+++.  ..++.|++.++ .|||+++|+||
T Consensus        53 L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~e~~G~~~~tL~~~l~~-~~~~e~--~~~~~~~L~~l~~yLh~~~Ivhr  129 (210)
T PRK10345         53 LSRRLIDWSGIPRYYGTVETDCGTGYVYDVIADFDGKPSITLTEFAEQ-CRYEED--VAQLRQLLKKLKRYLLDNRIVTM  129 (210)
T ss_pred             hhccCCCCcccceeeEEEEeCCCCeEEEEEEecCCCCcchhHHHHHHc-ccccHh--HHHHHHHHHHHHHHHHHCCEeec
Confidence            8443346899999999999874   434 78999  557999999966 456666  35678888777 99999999999


Q ss_pred             cCCCCcEEEeeCC-CCCCEEEeecCCC
Q 009980          167 DLKPENCLFLNDR-EDSPLKIMDFGLS  192 (521)
Q Consensus       167 dlkp~Nil~~~~~-~~~~~kl~Dfg~a  192 (521)
                      ||||+|||+...+ ....++|+||+.+
T Consensus       130 DlKp~NILl~~~~~~~~~~~LiDg~G~  156 (210)
T PRK10345        130 ELKPQNILCQRISESEVIPVVCDNIGE  156 (210)
T ss_pred             CCCHHHEEEeccCCCCCcEEEEECCCC
Confidence            9999999995432 3458999995544

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.85  E-value=2.2e-21  Score=205.82  Aligned_cols=202  Identities=20%  Similarity=0.214  Sum_probs=163.1

Q ss_pred             ccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHH
Q 009980            5 TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALL   84 (521)
Q Consensus         5 ~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (521)
                      .+.-...|.|.+.||+|+||+||+|.+..   ++.||+|+=+......                               +
T Consensus       693 ~~~~~~~~~I~~e~G~g~y~~vy~a~~~~---~~~~alK~e~P~~~WE-------------------------------f  738 (974)
T KOG1166|consen  693 FEVGGEKFCISKEIGEGSYGSVYVATHSN---GKLVALKVEKPPNPWE-------------------------------F  738 (974)
T ss_pred             eeecceeEEEEeeeccccceEEEEeecCC---CcEEEEEeecCCCcee-------------------------------e
Confidence            34456789999999999999999999874   8899999964322110                               1


Q ss_pred             HHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 009980           85 TNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIV  164 (521)
Q Consensus        85 ~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~  164 (521)
                      .--.+++.+|.  ..--|.|..+...+.-.+..++|+||.+.|+|.+++...+.+++.-+..+..|||..+..||..+||
T Consensus       739 YI~~q~~~RLk--~~~~~~~~~~~~a~~~~~~S~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~II  816 (974)
T KOG1166|consen  739 YICLQVMERLK--PQMLPSIMHISSAHVFQNASVLVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMGII  816 (974)
T ss_pred             eehHHHHHhhc--hhhhcchHHHHHHHccCCcceeeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhccee
Confidence            11123334441  1124677788888888888999999999999999999888899999999999999999999999999


Q ss_pred             eccCCCCcEEEee----CCCCCCEEEeecCCCccC---CCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHH
Q 009980          165 HRDLKPENCLFLN----DREDSPLKIMDFGLSSVE---GYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYIL  237 (521)
Q Consensus       165 H~dlkp~Nil~~~----~~~~~~~kl~Dfg~a~~~---~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l  237 (521)
                      |+||||+|+|+..    +.....++|+|||.|...   .........++|-.+-.+|+..+.+|+..+|.|.|+.++|.|
T Consensus       817 HgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~m  896 (974)
T KOG1166|consen  817 HGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVM  896 (974)
T ss_pred             cccCCcceeEeecccCCCCcccceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHH
Confidence            9999999999943    233556999999998642   233345667889999999999999999999999999999999


Q ss_pred             HhCCC
Q 009980          238 LSGYP  242 (521)
Q Consensus       238 l~g~~  242 (521)
                      |.|+.
T Consensus       897 LFG~y  901 (974)
T KOG1166|consen  897 LFGKY  901 (974)
T ss_pred             HHHHH
Confidence            99864

>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]

Probab=99.83  E-value=1.6e-19  Score=147.25  Aligned_cols=145  Identities=17%  Similarity=0.357  Sum_probs=136.1

Q ss_pred             cCCCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhh-ccCCC
Q 009980          356 SHDLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSS-LRKSQ  433 (521)
Q Consensus       356 ~~~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~-~~~~~  433 (521)
                      ...+++++.++++..|..||.+++| |+.+||..+++.+|..+..+++.++....|+++.|.|+|++|+..+.. ++...
T Consensus        24 ~~~l~~~q~q~i~e~f~lfd~~~~g~iD~~EL~vAmralGFE~~k~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~e~d  103 (172)
T KOG0028|consen   24 KSELTEEQKQEIKEAFELFDPDMAGKIDVEELKVAMRALGFEPKKEEILKLLADVDKEGSGKITFEDFRRVMTVKLGERD  103 (172)
T ss_pred             CccccHHHHhhHHHHHHhhccCCCCcccHHHHHHHHHHcCCCcchHHHHHHHHhhhhccCceechHHHHHHHHHHHhccC
Confidence            3556788889999999999999999 999999999999999999999999999999999999999999999776 66667


Q ss_pred             cHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          434 GDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       434 ~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      +.++++.+|+.+|.|++|.|+..+|+.+...+++.      ++++++.+++.++|.|+||-|+-+||.++|+.
T Consensus       104 t~eEi~~afrl~D~D~~Gkis~~~lkrvakeLgen------ltD~El~eMIeEAd~d~dgevneeEF~~imk~  170 (172)
T KOG0028|consen  104 TKEEIKKAFRLFDDDKTGKISQRNLKRVAKELGEN------LTDEELMEMIEEADRDGDGEVNEEEFIRIMKK  170 (172)
T ss_pred             cHHHHHHHHHcccccCCCCcCHHHHHHHHHHhCcc------ccHHHHHHHHHHhcccccccccHHHHHHHHhc
Confidence            89999999999999999999999999999999987      88899999999999999999999999999875

>PTZ00183 centrin; Provisional

Probab=99.83  E-value=2.4e-19  Score=157.32  Aligned_cols=147  Identities=18%  Similarity=0.360  Sum_probs=132.2

Q ss_pred             CCCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhc-cCCCc
Q 009980          357 HDLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSL-RKSQG  434 (521)
Q Consensus       357 ~~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~-~~~~~  434 (521)
                      ..+++.++.++...|..+|.+++| |+..||..+++.+|...+...+..+|+.+|.+++|.|+|+||+.++... .....
T Consensus         9 ~~~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~   88 (158)
T PTZ00183          9 PGLTEDQKKEIREAFDLFDTDGSGTIDPKELKVAMRSLGFEPKKEEIKQMIADVDKDGSGKIDFEEFLDIMTKKLGERDP   88 (158)
T ss_pred             CCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHhcCCCc
Confidence            457899999999999999999999 9999999999999887777889999999999999999999999987653 34456


Q ss_pred             HHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhcCcc
Q 009980          435 DDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDSS  509 (521)
Q Consensus       435 ~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~~~~  509 (521)
                      ++.++.+|+.+|.+++|+|+.+||..++...+..      ++++++..+|..+|.|++|.|+|+||..++...|.
T Consensus        89 ~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~------l~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~  157 (158)
T PTZ00183         89 REEILKAFRLFDDDKTGKISLKNLKRVAKELGET------ITDEELQEMIDEADRNGDGEISEEEFYRIMKKTNL  157 (158)
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCC------CCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhcccC
Confidence            6789999999999999999999999999887654      67778999999999999999999999999987653

>smart00090 RIO RIO-like kinase

Probab=99.83  E-value=5.5e-20  Score=171.12  Aligned_cols=165  Identities=17%  Similarity=0.111  Sum_probs=115.7

Q ss_pred             ceeecccccccCceEEEEeE-EccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccc----cccccccHHHHH
Q 009980           11 EYEVTDILGRGGFSVVRRGI-KKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPT----RKQVSVSDALLT   85 (521)
Q Consensus        11 ~Y~~~~~lG~G~~g~V~~a~-~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~   85 (521)
                      .|.+.+.||+|++|.||+|. +..  +++.||||+++.........        .....+....    ..........+.
T Consensus        29 ~~~i~~~Lg~G~~g~Vy~a~~~~~--~g~~vaiK~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~   98 (237)
T smart00090       29 LSAIGGCISTGKEANVYHALDFDG--SGKERAVKIYRTGTLEFKRR--------DRYVDGDFRFKYRKINPRKLVRLWAE   98 (237)
T ss_pred             hHHhCCeeccCcceeEEEEEecCC--CCcEEEEEEEEcCcceecch--------hhhcccchhhccCCCCHHHHHHHHHH
Confidence            58899999999999999998 555  78899999997543211000        0000000000    000001123467


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC-Ce
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQAN-IV  164 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~-i~  164 (521)
                      .|+.++.++..   .+..++++++.   . ..++||||+.|++|.........+....+..++.|++.++.+||+.| |+
T Consensus        99 ~E~~~L~~L~~---~~i~~p~~~~~---~-~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~ii  171 (237)
T smart00090       99 KEFRNLQRLYE---AGVPVPKPIAW---R-RNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGELV  171 (237)
T ss_pred             HHHHHHHHHHh---cCCCCCeeeEe---c-CceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCEE
Confidence            89999999921   12334444442   2 35899999999888776555566777788899999999999999999 99


Q ss_pred             eccCCCCcEEEeeCCCCCCEEEeecCCCccCC
Q 009980          165 HRDLKPENCLFLNDREDSPLKIMDFGLSSVEG  196 (521)
Q Consensus       165 H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~  196 (521)
                      ||||||+||++   + .+.++|+|||.|....
T Consensus       172 H~Dikp~NIli---~-~~~i~LiDFg~a~~~~  199 (237)
T smart00090      172 HGDLSEYNILV---H-DGKVVIIDVSQSVELD  199 (237)
T ss_pred             eCCCChhhEEE---E-CCCEEEEEChhhhccC
Confidence            99999999999   4 6789999999987543

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.82  E-value=5e-22  Score=206.96  Aligned_cols=262  Identities=27%  Similarity=0.444  Sum_probs=206.4

Q ss_pred             ccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEI   88 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   88 (521)
                      ...|.+.+.||+|+|+.|-.+..... ....+|+|.+.......                          ........|.
T Consensus        19 ~~~~~~~~~ig~gs~~~~~~~~~~~~-~~~~~a~~~~s~~~~~~--------------------------~~~~~i~~e~   71 (601)
T KOG0590|consen   19 NSQYKLSRSIGKGSFSSSALASNSRD-PESSSATKPISIPPKSE--------------------------DSSEHIDTET   71 (601)
T ss_pred             cccccccccccccccchhhhhhhcCC-CcceeeccCCCCCCCcc--------------------------chhhhcCccc
Confidence            56799999999999999998877542 34556777665432110                          0111233455


Q ss_pred             HHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHH-HhcC-CCCHHHHHHHHHHHHHHHHHHH-HCCCee
Q 009980           89 LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRI-VAQE-RYMEVGAAAVIRQIAEGLAALH-QANIVH  165 (521)
Q Consensus        89 ~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l-~~~~-~~~~~~~~~i~~qil~al~~lH-~~~i~H  165 (521)
                      .+-+.+    .+|+|++.+++.....+..+++++|..|+++++-+ .... ..+...+..++.|+..++.|+| ..++.|
T Consensus        72 ~~~~~~----s~h~n~~~~~~~~~~~~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h  147 (601)
T KOG0590|consen   72 DIQKKL----SKHSNTVHMIEPSSSPRSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTH  147 (601)
T ss_pred             cccccc----cccccccccCCccCCCcccccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCccccccc
Confidence            555555    24999999999999999999999999999999988 5544 6788899999999999999999 999999


Q ss_pred             ccCCCCcEEEeeCCCCC-CEEEeecCCCccCCC-CC---CcccccC-CcccccccccccC-CCCchhhhHHHHHHHHHHH
Q 009980          166 RDLKPENCLFLNDREDS-PLKIMDFGLSSVEGY-TD---PVVGLFG-SIDYVSPEALLQD-RITSKSDMWSLGVILYILL  238 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~-~~kl~Dfg~a~~~~~-~~---~~~~~~g-t~~y~aPE~~~~~-~~~~~~DiwslG~il~~ll  238 (521)
                      ||+||+|.++   +..+ .+++.|||+|..... ..   .....+| ++.|+|||...+. ...+..|+||+|+++.-++
T Consensus       148 ~~ikP~n~~l---~~s~~~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~  224 (601)
T KOG0590|consen  148 RDIKPSNSLL---DESGSALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAML  224 (601)
T ss_pred             CCCCCccchh---ccCCCcccCCCchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccc
Confidence            9999999999   5666 899999999986554 22   2344578 9999999999875 4478899999999999999


Q ss_pred             hCCCCCCCCCcHHHH-HHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccC
Q 009980          239 SGYPPFIAQSNRQKQ-QMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIG  304 (521)
Q Consensus       239 ~g~~pf~~~~~~~~~-~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~  304 (521)
                      +|..||......... .........+....|..++....+++.+++..+|..|.+.+++-.+||+..
T Consensus       225 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~  291 (601)
T KOG0590|consen  225 TGELPWDFPSRKDGRYSSWKSNKGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS  291 (601)
T ss_pred             cCCCCccccccccccceeecccccccccCccccCChhhhhcccccccCCchhccccccccccccccc
Confidence            999999765544322 112222223345568889999999999999999999999999999999987

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.82  E-value=1.4e-20  Score=167.67  Aligned_cols=239  Identities=23%  Similarity=0.308  Sum_probs=182.3

Q ss_pred             eecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHH
Q 009980           13 EVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMR   92 (521)
Q Consensus        13 ~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   92 (521)
                      .+..+|.....|..|+++..    +..+++|+++.......                         . ...+..|.-.++
T Consensus       193 nl~tkl~e~hsgelwrgrwq----gndivakil~vr~~t~r-------------------------i-srdfneefp~lr  242 (448)
T KOG0195|consen  193 NLITKLAESHSGELWRGRWQ----GNDIVAKILNVREVTAR-------------------------I-SRDFNEEFPALR  242 (448)
T ss_pred             hhhhhhccCCCccccccccc----Ccchhhhhhhhhhcchh-------------------------h-cchhhhhCccee
Confidence            44567888889999999885    34577888765433221                         1 123677888887


Q ss_pred             HHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCC--CeeccC
Q 009980           93 KIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQER--YMEVGAAAVIRQIAEGLAALHQAN--IVHRDL  168 (521)
Q Consensus        93 ~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~--~~~~~~~~i~~qil~al~~lH~~~--i~H~dl  168 (521)
                      -+     .||||+.+++.+..+.+..+|..|++-|+|+..+.....  ....++..++..++.|++|||+..  |.---|
T Consensus       243 if-----shpnilpvlgacnsppnlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~l  317 (448)
T KOG0195|consen  243 IF-----SHPNILPVLGACNSPPNLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYL  317 (448)
T ss_pred             ee-----cCCchhhhhhhccCCCCceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhc
Confidence            77     999999999999999999999999999999999987654  456789999999999999999985  444457


Q ss_pred             CCCcEEEeeCCCCC--CEEEeecCCCccCCCCCCcccccCCcccccccccccCCCC---chhhhHHHHHHHHHHHhCCCC
Q 009980          169 KPENCLFLNDREDS--PLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRIT---SKSDMWSLGVILYILLSGYPP  243 (521)
Q Consensus       169 kp~Nil~~~~~~~~--~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~---~~~DiwslG~il~~ll~g~~p  243 (521)
                      ....+++   +.+-  .+-.+|-.++...      ....-.|.||+||.++..+-+   .++|+||+++++|||.|...|
T Consensus       318 ns~hvmi---dedltarismad~kfsfqe------~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevp  388 (448)
T KOG0195|consen  318 NSKHVMI---DEDLTARISMADTKFSFQE------VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVP  388 (448)
T ss_pred             ccceEEe---cchhhhheecccceeeeec------cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccc
Confidence            8888888   4443  4445554443321      122346789999999876643   579999999999999999999


Q ss_pred             CCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHH
Q 009980          244 FIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELL  297 (521)
Q Consensus       244 f~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l  297 (521)
                      |...++.+.--+|.-..+.  ...++++|+.+..|+.-|+..||.+||.+..+.
T Consensus       389 fadlspmecgmkialeglr--v~ippgis~hm~klm~icmnedpgkrpkfdmiv  440 (448)
T KOG0195|consen  389 FADLSPMECGMKIALEGLR--VHIPPGISRHMNKLMNICMNEDPGKRPKFDMIV  440 (448)
T ss_pred             cccCCchhhhhhhhhcccc--ccCCCCccHHHHHHHHHHhcCCCCcCCCcceeh
Confidence            9988887765555433322  223367999999999999999999999887654

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.81  E-value=9.3e-21  Score=184.68  Aligned_cols=176  Identities=28%  Similarity=0.429  Sum_probs=137.1

Q ss_pred             CeEEEEEeccCCCchHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCC
Q 009980          115 NGVHLILELCSGGELFDRIVAQE---RYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGL  191 (521)
Q Consensus       115 ~~~~lv~e~~~gg~L~~~l~~~~---~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~  191 (521)
                      .++||.|++|...+|.+++..+.   ..+...+..++.|+..|+.|   +|.+|+|+||.||++   ..+..+||.|||+
T Consensus       329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~---~~d~q~kIgDFgl  402 (516)
T KOG1033|consen  329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFF---SDDDQLKIGDFGL  402 (516)
T ss_pred             cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhcccccccc---ccchhhhhhhhhh
Confidence            36889999999999999997543   35677899999999999999   999999999999999   4555799999999


Q ss_pred             CccCCCCC-------CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCc-HHHHHHHHcCCCCC
Q 009980          192 SSVEGYTD-------PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSN-RQKQQMIMAGEFSF  263 (521)
Q Consensus       192 a~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-~~~~~~i~~~~~~~  263 (521)
                      ........       ..+...||+.||+||.+.++.|+.++||||||+||++|+.   +|..... ......+..+.+  
T Consensus       403 ~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~---~f~T~~er~~t~~d~r~g~i--  477 (516)
T KOG1033|consen  403 VTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI---QFSTQFERIATLTDIRDGII--  477 (516)
T ss_pred             eeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH---HhccHHHHHHhhhhhhcCCC--
Confidence            87544332       3455679999999999999999999999999999999997   3322111 112233344443  


Q ss_pred             chhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcc
Q 009980          264 YEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV  302 (521)
Q Consensus       264 ~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~  302 (521)
                      ++..+.+.| .-..|+.+||.+.|.+||++.+.--|+|+
T Consensus       478 p~~~~~d~p-~e~~ll~~lls~~p~~RP~~~~~~~~~~~  515 (516)
T KOG1033|consen  478 PPEFLQDYP-EEYTLLQQLLSPSPEERPSAIEVALHEFL  515 (516)
T ss_pred             ChHHhhcCc-HHHHHHHHhcCCCcccCchHHHHhhhhhc
Confidence            333334443 44599999999999999988887778775

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.81  E-value=4.8e-19  Score=163.41  Aligned_cols=144  Identities=20%  Similarity=0.250  Sum_probs=114.1

Q ss_pred             cccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHH
Q 009980           15 TDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKI   94 (521)
Q Consensus        15 ~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l   94 (521)
                      .+.||+|++|.||+|..    .+..+++|+........+                    ..........+.+|+.++..+
T Consensus         1 ~~~l~~G~~~~vy~~~~----~~~~~~vK~~~~~~~~~~--------------------~~~~~~~~~~~~~E~~~l~~l   56 (211)
T PRK14879          1 MKLIKRGAEAEIYLGDF----LGIKAVIKWRIPKRYRHP--------------------ELDERIRRERTRREARIMSRA   56 (211)
T ss_pred             CcccccCceEEEEEEee----CCCceEEEEeCCcCCcCh--------------------HHHHHHHHHHHHHHHHHHHHH
Confidence            36799999999999987    456799998653221110                    000112234577899999998


Q ss_pred             hhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEE
Q 009980           95 VENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCL  174 (521)
Q Consensus        95 ~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil  174 (521)
                           .|++|+....++.+.+..++||||++|++|.+.+.....    ....++.+++.+|.++|+.|++|||++|.||+
T Consensus        57 -----~~~~i~~p~~~~~~~~~~~lv~e~~~G~~L~~~~~~~~~----~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil  127 (211)
T PRK14879         57 -----RKAGVNVPAVYFVDPENFIIVMEYIEGEPLKDLINSNGM----EELELSREIGRLVGKLHSAGIIHGDLTTSNMI  127 (211)
T ss_pred             -----HHCCCCCCeEEEEeCCCCEEEEEEeCCcCHHHHHHhccH----HHHHHHHHHHHHHHHHHhCCcccCCCCcccEE
Confidence                 889988877777788889999999999999998865432    88899999999999999999999999999999


Q ss_pred             EeeCCCCCCEEEeecCCCccC
Q 009980          175 FLNDREDSPLKIMDFGLSSVE  195 (521)
Q Consensus       175 ~~~~~~~~~~kl~Dfg~a~~~  195 (521)
                      +   + .+.++|+|||.+...
T Consensus       128 ~---~-~~~~~liDf~~a~~~  144 (211)
T PRK14879        128 L---S-GGKIYLIDFGLAEFS  144 (211)
T ss_pred             E---E-CCCEEEEECCcccCC
Confidence            9   3 678999999998753

>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]

Probab=99.81  E-value=3.3e-19  Score=155.50  Aligned_cols=163  Identities=33%  Similarity=0.583  Sum_probs=135.9

Q ss_pred             HHHhhhccCCCCHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHhcCC-CCCcchHHHHHHHHcCCCCcceeHHHHHHHHh
Q 009980          349 KLKNLLGSHDLNEEEIQNLRIHFRTICANGDNATLSEFEEVLKAMNM-SSLVPLAPRIFDLFDNNRDGTVDMREILCGFS  427 (521)
Q Consensus       349 ~l~~l~~~~~~~~~~~~~l~~~F~~~D~~~~gi~~~el~~~l~~~~~-~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~  427 (521)
                      .+.++...+.++++++..+++-|..-+++| -++.++|+.++..++. ......+..+|+.||.|+||.|+|.||+.+++
T Consensus        13 ~~e~l~~~t~f~~~ei~~~Yr~Fk~~cP~G-~~~~~~F~~i~~~~fp~gd~~~y~~~vF~~fD~~~dg~i~F~Efi~als   91 (193)
T KOG0044|consen   13 SLEQLVQQTKFSKKEIQQWYRGFKNECPSG-RLTLEEFREIYASFFPDGDASKYAELVFRTFDKNKDGTIDFLEFICALS   91 (193)
T ss_pred             HHHHHHHhcCCCHHHHHHHHHHhcccCCCC-ccCHHHHHHHHHHHCCCCCHHHHHHHHHHHhcccCCCCcCHHHHHHHHH
Confidence            356666678899999999999998866543 2899999999999865 33445778999999999999999999999999


Q ss_pred             hccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhC----CCCCC-CCCCCChhHHHHHHHHhcCCCCcceeHHHHHH
Q 009980          428 SLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRAL----PDDCL-PVDITEPGKLDEIFDLMDANNDGKVTFDEFRA  502 (521)
Q Consensus       428 ~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~----~~~~~-~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~  502 (521)
                      .......++.++.+|+.||.|++|+||.+|+..++...    +.... ..+...++.+..+|+.+|.|+||.||++||..
T Consensus        92 ~~~rGt~eekl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~~~~~~~~~~v~~if~k~D~n~Dg~lT~eef~~  171 (193)
T KOG0044|consen   92 LTSRGTLEEKLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALPEDEETPEERVDKIFSKMDKNKDGKLTLEEFIE  171 (193)
T ss_pred             HHcCCcHHHHhhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCCcccccHHHHHHHHHHHcCCCCCCcccHHHHHH
Confidence            98888999999999999999999999999999888653    22111 12234567899999999999999999999999


Q ss_pred             HHhcCccHHH
Q 009980          503 AMQRDSSLQD  512 (521)
Q Consensus       503 ~~~~~~~~~~  512 (521)
                      .+...+.+.+
T Consensus       172 ~~~~d~~i~~  181 (193)
T KOG0044|consen  172 GCKADPSILR  181 (193)
T ss_pred             HhhhCHHHHH
Confidence            9998887653

>PTZ00184 calmodulin; Provisional

Probab=99.80  E-value=1.4e-18  Score=150.90  Aligned_cols=142  Identities=22%  Similarity=0.454  Sum_probs=127.6

Q ss_pred             CCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhc-cCCCcH
Q 009980          358 DLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSL-RKSQGD  435 (521)
Q Consensus       358 ~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~-~~~~~~  435 (521)
                      .++++++.+++..|..+|.+++| |+.+||..++..++..+..+.+..+|+.+|.+++|.|+|+||+.++... ......
T Consensus         4 ~~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~~~~~   83 (149)
T PTZ00184          4 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTLMARKMKDTDSE   83 (149)
T ss_pred             ccCHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCcCcHHHHHHHHHHhccCCcHH
Confidence            47888999999999999999999 9999999999999888888899999999999999999999999988764 334556


Q ss_pred             HHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHh
Q 009980          436 DALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQ  505 (521)
Q Consensus       436 ~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~  505 (521)
                      +.+..+|+.+|.+++|+|+.+||..++...+..      .+.+++..+|..+|.+++|.|+|+||..++.
T Consensus        84 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~------~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~  147 (149)
T PTZ00184         84 EEIKEAFKVFDRDGNGFISAAELRHVMTNLGEK------LTDEEVDEMIREADVDGDGQINYEEFVKMMM  147 (149)
T ss_pred             HHHHHHHHhhCCCCCCeEeHHHHHHHHHHHCCC------CCHHHHHHHHHhcCCCCCCcCcHHHHHHHHh
Confidence            789999999999999999999999999886543      5667899999999999999999999999875

>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]

Probab=99.78  E-value=7.1e-18  Score=136.43  Aligned_cols=140  Identities=15%  Similarity=0.321  Sum_probs=129.6

Q ss_pred             CCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhh-ccCCCcHH
Q 009980          359 LNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSS-LRKSQGDD  436 (521)
Q Consensus       359 ~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~-~~~~~~~~  436 (521)
                      +++.+++++++.|..+|.|+|| |+.++|+..|.++|...+++++..+++.    ..|-|+|.-|+.++.. +....+++
T Consensus        26 f~q~QIqEfKEAF~~mDqnrDG~IdkeDL~d~~aSlGk~~~d~elDaM~~E----a~gPINft~FLTmfGekL~gtdpe~  101 (171)
T KOG0031|consen   26 FDQSQIQEFKEAFNLMDQNRDGFIDKEDLRDMLASLGKIASDEELDAMMKE----APGPINFTVFLTMFGEKLNGTDPEE  101 (171)
T ss_pred             hhHHHHHHHHHHHHHHhccCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHh----CCCCeeHHHHHHHHHHHhcCCCHHH
Confidence            7889999999999999999999 9999999999999999999999999976    5789999999999987 55556788


Q ss_pred             HHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhcCc
Q 009980          437 ALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDS  508 (521)
Q Consensus       437 ~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~~~  508 (521)
                      .+..+|+.||.+++|.|..+.|+++|...++.      .++++++.+|+.+-.|..|.|+|.+|..+++.++
T Consensus       102 ~I~~AF~~FD~~~~G~I~~d~lre~Ltt~gDr------~~~eEV~~m~r~~p~d~~G~~dy~~~~~~ithG~  167 (171)
T KOG0031|consen  102 VILNAFKTFDDEGSGKIDEDYLRELLTTMGDR------FTDEEVDEMYREAPIDKKGNFDYKAFTYIITHGE  167 (171)
T ss_pred             HHHHHHHhcCccCCCccCHHHHHHHHHHhccc------CCHHHHHHHHHhCCcccCCceeHHHHHHHHHccc
Confidence            89999999999999999999999999998876      7889999999999999999999999999998654

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.78  E-value=2e-18  Score=157.74  Aligned_cols=139  Identities=23%  Similarity=0.314  Sum_probs=106.9

Q ss_pred             cccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHHhh
Q 009980           17 ILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVE   96 (521)
Q Consensus        17 ~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~   96 (521)
                      .||+|++|.||+|..    .+..+++|..........                    ..........+.+|+.++..+  
T Consensus         1 ~ig~G~~~~vy~~~~----~~~~~viK~~~~~~~~~~--------------------~~~~~~~~~~~~~E~~~l~~l--   54 (199)
T TIGR03724         1 LIAKGAEAIIYLGDF----LGLKAVIKERVPKSYRHP--------------------ELDERIRRERTRNEARLLSRA--   54 (199)
T ss_pred             CCCCCceEEEEEeec----CCccEEEEEecCCcCcCc--------------------hHHHHHHHHHHHHHHHHHHHH--
Confidence            489999999999984    467899999653221110                    000112234577899999998  


Q ss_pred             ccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEe
Q 009980           97 NVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFL  176 (521)
Q Consensus        97 ~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~~  176 (521)
                         .|+++....-++...+..++||||++|++|.+.+.....       .++.|++.+|.+||+.|++|+|++|.||++ 
T Consensus        55 ---~~~~i~~p~~~~~~~~~~~lv~e~~~g~~l~~~~~~~~~-------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~-  123 (199)
T TIGR03724        55 ---RKAGVNTPVVYDVDPDNKTIVMEYIEGKPLKDVIEEGND-------ELLREIGRLVGKLHKAGIVHGDLTTSNIIV-  123 (199)
T ss_pred             ---HHCCCCCCEEEEEECCCCEEEEEEECCccHHHHHhhcHH-------HHHHHHHHHHHHHHHCCeecCCCCcceEEE-
Confidence               777766555555667778999999999999887754321       789999999999999999999999999999 


Q ss_pred             eCCCCCCEEEeecCCCccC
Q 009980          177 NDREDSPLKIMDFGLSSVE  195 (521)
Q Consensus       177 ~~~~~~~~kl~Dfg~a~~~  195 (521)
                        + .+.++++|||++...
T Consensus       124 --~-~~~~~liDfg~a~~~  139 (199)
T TIGR03724       124 --R-DDKLYLIDFGLGKYS  139 (199)
T ss_pred             --E-CCcEEEEECCCCcCC
Confidence              4 678999999998764

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]

Probab=99.78  E-value=3.8e-18  Score=149.10  Aligned_cols=150  Identities=31%  Similarity=0.567  Sum_probs=126.0

Q ss_pred             CCHHHHHHHHHHHHhhhcC-CCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcc-eeHHHHHHHHhhccCCCcH
Q 009980          359 LNEEEIQNLRIHFRTICAN-GDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGT-VDMREILCGFSSLRKSQGD  435 (521)
Q Consensus       359 ~~~~~~~~l~~~F~~~D~~-~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~-I~~~ef~~~~~~~~~~~~~  435 (521)
                      ++..|+..|...|.++|.+ ++| ++.+||..+.. +.   .++...+++..||.+++|. |+|++|+..+.........
T Consensus        27 fs~~EI~~L~~rF~kl~~~~~~g~lt~eef~~i~~-~~---~Np~~~rI~~~f~~~~~~~~v~F~~Fv~~ls~f~~~~~~  102 (187)
T KOG0034|consen   27 FSANEIERLYERFKKLDRNNGDGYLTKEEFLSIPE-LA---LNPLADRIIDRFDTDGNGDPVDFEEFVRLLSVFSPKASK  102 (187)
T ss_pred             cCHHHHHHHHHHHHHhccccccCccCHHHHHHHHH-Hh---cCcHHHHHHHHHhccCCCCccCHHHHHHHHhhhcCCccH
Confidence            7889999999999999999 889 99999998872 22   2467889999999999998 9999999999987666554


Q ss_pred             -HHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCC-CCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhcCccHHH
Q 009980          436 -DALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLP-VDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDSSLQD  512 (521)
Q Consensus       436 -~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~-~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~~~~~~~  512 (521)
                       ++++.+|+.||.+++|+|+.+|+..++..+...... .+..-++.++.+|.++|.|+||+|+|+||++++.+.|.+.+
T Consensus       103 ~~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~~~~~~~e~~~~i~d~t~~e~D~d~DG~IsfeEf~~~v~~~P~~~~  181 (187)
T KOG0034|consen  103 REKLRFAFRVYDLDGDGFISREELKQILRMMVGENDDMSDEQLEDIVDKTFEEADTDGDGKISFEEFCKVVEKQPDLLE  181 (187)
T ss_pred             HHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHcCccHHH
Confidence             499999999999999999999999999876443221 01122345788999999999999999999999999887654

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.75  E-value=1.3e-17  Score=152.01  Aligned_cols=156  Identities=20%  Similarity=0.211  Sum_probs=109.5

Q ss_pred             ceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccc---cccccccHHHHHHH
Q 009980           11 EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPT---RKQVSVSDALLTNE   87 (521)
Q Consensus        11 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~E   87 (521)
                      .|.+.+.||+|+||.||+|..+   +++.||||+++........ ..        ....+...   .............|
T Consensus        16 ~~~~~~~i~~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~-~~--------~~~~~~~~~~~~~~~~~~~~~~~~E   83 (198)
T cd05144          16 VESLGNQIGVGKESDVYLALDP---DGNPVALKFHRLGRTSFRK-VK--------RKRDYLGDRKHASWLYLSRLAAQKE   83 (198)
T ss_pred             hhhcCCccccCcceEEEEEEcC---CCCEEEEEEEecccchhhh-hc--------chHHHHhccccchhHHHhHHHHHHH
Confidence            3888999999999999999875   6789999998753211000 00        00000000   00011122346778


Q ss_pred             HHHHHHHhhccCCCC--CccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           88 ILVMRKIVENVSPHP--NVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        88 ~~~l~~l~~~~~~hp--niv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      +.++.++     .|+  .++..++    ....++||||++|++|.....      ......++.+++.++.++|+.||+|
T Consensus        84 ~~~l~~l-----~~~~i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~------~~~~~~~~~~i~~~l~~lh~~gi~H  148 (198)
T cd05144          84 FAALKAL-----YEEGFPVPKPID----WNRHAVVMEYIDGVELYRVRV------LEDPEEVLDEILEEIVKAYKHGIIH  148 (198)
T ss_pred             HHHHHHH-----HHcCCCCCceee----cCCceEEEEEeCCcchhhccc------cccHHHHHHHHHHHHHHHHHCCCCc
Confidence            9999888     566  3444443    245689999999999865432      1456678899999999999999999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCC
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEG  196 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~  196 (521)
                      |||||+||++   +.++.++|+|||.+....
T Consensus       149 ~Dl~p~Nill---~~~~~~~liDfg~~~~~~  176 (198)
T cd05144         149 GDLSEFNILV---DDDEKIYIIDWPQMVSTD  176 (198)
T ss_pred             CCCCcccEEE---cCCCcEEEEECCccccCC
Confidence            9999999999   667899999999996544

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.74  E-value=9.2e-18  Score=167.13  Aligned_cols=196  Identities=27%  Similarity=0.392  Sum_probs=156.2

Q ss_pred             CCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCC-eeccCCCCcEEEee
Q 009980          100 PHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQANI-VHRDLKPENCLFLN  177 (521)
Q Consensus       100 ~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~al~~lH~~~i-~H~dlkp~Nil~~~  177 (521)
                      .|.|+.++++...++...++|.+||..|+|.|.+.. .-.+..--...+++.|+.||.|+|+..| .|+.+++.|.++  
T Consensus         5 ~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nClv--   82 (484)
T KOG1023|consen    5 DHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNCLV--   82 (484)
T ss_pred             chhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeecccccee--
Confidence            899999999999999999999999999999999987 3457777788899999999999999876 999999999999  


Q ss_pred             CCCCCCEEEeecCCCccCCCC---CCcccccCCcccccccccccCC-------CCchhhhHHHHHHHHHHHhCCCCCCCC
Q 009980          178 DREDSPLKIMDFGLSSVEGYT---DPVVGLFGSIDYVSPEALLQDR-------ITSKSDMWSLGVILYILLSGYPPFIAQ  247 (521)
Q Consensus       178 ~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~-------~~~~~DiwslG~il~~ll~g~~pf~~~  247 (521)
                       +....+||+|||+.......   .......-...|.|||.+....       .+.++|+||+|+++|++++...||...
T Consensus        83 -d~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~  161 (484)
T KOG1023|consen   83 -DSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLR  161 (484)
T ss_pred             -eeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccccc
Confidence             88999999999998765320   1111112344699999987642       356799999999999999999999653


Q ss_pred             C----cHHHHHHHHc-CCCCCchhhh--hccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          248 S----NRQKQQMIMA-GEFSFYEQTW--KNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       248 ~----~~~~~~~i~~-~~~~~~~~~~--~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      .    ..++...+.. +...+.+..+  ..+++++..++..|+..+|..||+++++-.
T Consensus       162 ~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~  219 (484)
T KOG1023|consen  162 NLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRS  219 (484)
T ss_pred             cccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHh
Confidence            2    2345555666 3333332222  246678999999999999999999999876

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.73  E-value=3e-17  Score=172.07  Aligned_cols=145  Identities=23%  Similarity=0.335  Sum_probs=111.4

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ..|...+.||+|+||+||+|....    ..+++|..........                    ..........+.+|+.
T Consensus       333 ~~~~~~~~iG~G~~g~Vy~~~~~~----~~~v~k~~~~~~~~~~--------------------~~~~~~~~~~~~~E~~  388 (535)
T PRK09605        333 RRKIPDHLIGKGAEADIKKGEYLG----RDAVIKERVPKGYRHP--------------------ELDERLRTERTRAEAR  388 (535)
T ss_pred             cccCccceeccCCcEEEEEEeecC----ccceeEEEecccccch--------------------hHHHHHHHHHHHHHHH
Confidence            345567899999999999998743    3455555322111000                    0001122345788999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCC
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLK  169 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlk  169 (521)
                      +++++     .|++|+....++.+....++||||++|++|.+++.        ....++.|++.+|.|||+.|++|||||
T Consensus       389 ~l~~l-----~~~~i~~p~~~~~~~~~~~lv~E~~~g~~L~~~l~--------~~~~~~~~i~~~L~~lH~~giiHrDlk  455 (535)
T PRK09605        389 LLSEA-----RRAGVPTPVIYDVDPEEKTIVMEYIGGKDLKDVLE--------GNPELVRKVGEIVAKLHKAGIVHGDLT  455 (535)
T ss_pred             HHHhh-----cccCCCeeEEEEEeCCCCEEEEEecCCCcHHHHHH--------HHHHHHHHHHHHHHHHHhCCCccCCCC
Confidence            99999     89999988887777778899999999999998775        456789999999999999999999999


Q ss_pred             CCcEEEeeCCCCCCEEEeecCCCccC
Q 009980          170 PENCLFLNDREDSPLKIMDFGLSSVE  195 (521)
Q Consensus       170 p~Nil~~~~~~~~~~kl~Dfg~a~~~  195 (521)
                      |+||++    .++.++|+|||+|+..
T Consensus       456 p~NILl----~~~~~~liDFGla~~~  477 (535)
T PRK09605        456 TSNFIV----RDDRLYLIDFGLGKYS  477 (535)
T ss_pred             hHHEEE----ECCcEEEEeCcccccC
Confidence            999999    2467999999999764

>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]

Probab=99.72  E-value=8.3e-17  Score=128.04  Aligned_cols=141  Identities=14%  Similarity=0.293  Sum_probs=126.0

Q ss_pred             CCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCC--CCcceeHHHHHHHHhhccCC--
Q 009980          358 DLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNN--RDGTVDMREILCGFSSLRKS--  432 (521)
Q Consensus       358 ~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~--~~g~I~~~ef~~~~~~~~~~--  432 (521)
                      .++++++.+++++|..||..+|| |+..+...+|+.+|.+|++.++.+....++++  +-..|+|++|+.++..+...  
T Consensus         4 ~~~~d~~~e~ke~F~lfD~~gD~ki~~~q~gdvlRalG~nPT~aeV~k~l~~~~~~~~~~~rl~FE~fLpm~q~vaknk~   83 (152)
T KOG0030|consen    4 AFTPDQMEEFKEAFLLFDRTGDGKISGSQVGDVLRALGQNPTNAEVLKVLGQPKRREMNVKRLDFEEFLPMYQQVAKNKD   83 (152)
T ss_pred             ccCcchHHHHHHHHHHHhccCcccccHHHHHHHHHHhcCCCcHHHHHHHHcCcccchhhhhhhhHHHHHHHHHHHHhccc
Confidence            46788889999999999999999 99999999999999999999999999988877  45789999999998876543  


Q ss_pred             -CcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHh
Q 009980          433 -QGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQ  505 (521)
Q Consensus       433 -~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~  505 (521)
                       .+-++...-++.||++++|.|...|++++|..+|+.      +++++++.++.-.. |.+|.|+|+.|++.+.
T Consensus        84 q~t~edfvegLrvFDkeg~G~i~~aeLRhvLttlGek------l~eeEVe~Llag~e-D~nG~i~YE~fVk~i~  150 (152)
T KOG0030|consen   84 QGTYEDFVEGLRVFDKEGNGTIMGAELRHVLTTLGEK------LTEEEVEELLAGQE-DSNGCINYEAFVKHIM  150 (152)
T ss_pred             cCcHHHHHHHHHhhcccCCcceeHHHHHHHHHHHHhh------ccHHHHHHHHcccc-ccCCcCcHHHHHHHHh
Confidence             455778888999999999999999999999999987      88889999997765 7889999999998764

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.70  E-value=1.1e-16  Score=144.64  Aligned_cols=161  Identities=22%  Similarity=0.208  Sum_probs=101.6

Q ss_pred             ecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCcccccccccc---ccccHHHHHHHHHH
Q 009980           14 VTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQ---VSVSDALLTNEILV   90 (521)
Q Consensus        14 ~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~E~~~   90 (521)
                      +.+.||+|+||.||+|.+.   +++.||||++...........   ....    .........   ..........|...
T Consensus         1 ~~~~lg~G~~g~Vy~a~~~---~~~~vavKv~~~~~~~~~~~~---~~~~----~~~~~~~~~~~~~~~~~~~~~~e~~~   70 (187)
T cd05119           1 VGGPIGTGKEADVYLALDG---DGEPVAVKIYRTGRTSFKKRK---RYRT----GDYRFGRKKSNWRYLSRLWAEKEFRN   70 (187)
T ss_pred             CCcccccccceeEEEEECC---CCCEEEEEEEecCccchhhhh---hhhH----HHHHhccCCcchhhhhhHHHHHHHHH
Confidence            3578999999999999875   578899999875432110000   0000    000000000   00111123456777


Q ss_pred             HHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeccCC
Q 009980           91 MRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ-ANIVHRDLK  169 (521)
Q Consensus        91 l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~-~~i~H~dlk  169 (521)
                      +.++..   .+..+++++.+    ...++||||++|+.+........... .++..++.+++.++.++|+ .||+|||||
T Consensus        71 l~~l~~---~~~~~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~~~-~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~  142 (187)
T cd05119          71 LKRLYE---AGVPVPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVRLL-EDPEELYDQILELMRKLYREAGLVHGDLS  142 (187)
T ss_pred             HHHHHH---cCCCCCceEec----CCCEEEEEEeCCCCccChhhhhhhhc-ccHHHHHHHHHHHHHHHhhccCcCcCCCC
Confidence            777621   22335555543    23589999999954432111111111 6788999999999999999 999999999


Q ss_pred             CCcEEEeeCCCCCCEEEeecCCCccCC
Q 009980          170 PENCLFLNDREDSPLKIMDFGLSSVEG  196 (521)
Q Consensus       170 p~Nil~~~~~~~~~~kl~Dfg~a~~~~  196 (521)
                      |+||++   + ++.++|+|||.|....
T Consensus       143 p~Nili---~-~~~~~liDfg~a~~~~  165 (187)
T cd05119         143 EYNILV---D-DGKVYIIDVPQAVEID  165 (187)
T ss_pred             hhhEEE---E-CCcEEEEECccccccc
Confidence            999999   4 7789999999997543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.66  E-value=1.8e-15  Score=141.23  Aligned_cols=147  Identities=16%  Similarity=0.187  Sum_probs=104.6

Q ss_pred             cccc-ccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCcccccccc-ccccccHHHHHHHHHHHHH
Q 009980           16 DILG-RGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTR-KQVSVSDALLTNEILVMRK   93 (521)
Q Consensus        16 ~~lG-~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~E~~~l~~   93 (521)
                      ..|| .|+.|+||.+...    +..+|||.+.+...-...                .... .........+.+|+.++.+
T Consensus        37 ~~lg~~~g~gtv~~v~~~----~~~~vlk~~~r~~~i~kv----------------~~~~~~~~~~~~~r~~rE~~ll~~   96 (239)
T PRK01723         37 RVVGSAKGRGTTWFVQTP----GVNWVLRHYRRGGLIGKL----------------SKDRYLFTGLERTRAFAEFRLLAQ   96 (239)
T ss_pred             ceeecCCCCccEEEEEeC----CceEEEEEeeEcchHHhh----------------hhhcccccchhhhHHHHHHHHHHH
Confidence            4587 8889999988763    567999998653221000                0000 0001234557889999999


Q ss_pred             HhhccCCCCCc--cceeEEEEeC-Ce---EEEEEeccCC-CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 009980           94 IVENVSPHPNV--IDLYDVYEDQ-NG---VHLILELCSG-GELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHR  166 (521)
Q Consensus        94 l~~~~~~hpni--v~~~~~~~~~-~~---~~lv~e~~~g-g~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~  166 (521)
                      |     .|++|  ++.+++.... ..   .++|||+++| .+|.+++.. ..+++..    +.|++.+|.+||++||+||
T Consensus        97 L-----~~~gi~vP~pl~~~~~~~~~~~~~~lV~e~l~G~~~L~~~l~~-~~l~~~~----~~~i~~~l~~lH~~GI~Hr  166 (239)
T PRK01723         97 L-----YEAGLPVPRPIAARVVRHGLFYRADILIERIEGARDLVALLQE-APLSEEQ----WQAIGQLIARFHDAGVYHA  166 (239)
T ss_pred             H-----HhCCCCCceeEeeeeeecCcceeeeEEEEecCCCCCHHHHHhc-CCCCHHH----HHHHHHHHHHHHHCCCCCC
Confidence            9     77764  6777764433 22   3599999998 688877754 4566543    5789999999999999999


Q ss_pred             cCCCCcEEEeeCCCCCCEEEeecCCCccC
Q 009980          167 DLKPENCLFLNDREDSPLKIMDFGLSSVE  195 (521)
Q Consensus       167 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~  195 (521)
                      ||||.|||+   +.++.++|+|||.+...
T Consensus       167 Dlkp~NILv---~~~~~v~LIDfg~~~~~  192 (239)
T PRK01723        167 DLNAHNILL---DPDGKFWLIDFDRGELR  192 (239)
T ss_pred             CCCchhEEE---cCCCCEEEEECCCcccC
Confidence            999999999   55668999999988753

>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]

Probab=99.65  E-value=1.5e-15  Score=131.31  Aligned_cols=121  Identities=22%  Similarity=0.388  Sum_probs=107.8

Q ss_pred             chHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhH
Q 009980          400 PLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGK  479 (521)
Q Consensus       400 ~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~  479 (521)
                      .++.++|+.||.|++|.|+-.|+..+++.++..+++.++..+++.+|.|++|.|+++||..++........... ...++
T Consensus         8 ~el~~~F~~fD~d~~G~i~~~el~~~lr~lg~~~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~~~-~~~~e   86 (151)
T KOG0027|consen    8 LELKEAFQLFDKDGDGKISVEELGAVLRSLGQNPTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTDEE-ASSEE   86 (151)
T ss_pred             HHHHHHHHHHCCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhccccccc-ccHHH
Confidence            46788999999999999999999999999999999999999999999999999999999999987654321111 23458


Q ss_pred             HHHHHHHhcCCCCcceeHHHHHHHHhc-CccHHHHHHHhhhhC
Q 009980          480 LDEIFDLMDANNDGKVTFDEFRAAMQR-DSSLQDVVLSSLRQQ  521 (521)
Q Consensus       480 ~~~~f~~~D~~~dG~I~~~Ef~~~~~~-~~~~~~~~~~~~~~~  521 (521)
                      +.++|+.+|+|+||+|+.+||+.+|+. ++.++.++++.|+++
T Consensus        87 l~eaF~~fD~d~~G~Is~~el~~~l~~lg~~~~~~e~~~mi~~  129 (151)
T KOG0027|consen   87 LKEAFRVFDKDGDGFISASELKKVLTSLGEKLTDEECKEMIRE  129 (151)
T ss_pred             HHHHHHHHccCCCCcCcHHHHHHHHHHhCCcCCHHHHHHHHHh
Confidence            999999999999999999999999999 999999999999864

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.64  E-value=6e-17  Score=169.19  Aligned_cols=265  Identities=25%  Similarity=0.354  Sum_probs=206.4

Q ss_pred             cccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      -.+.+.+.+.+-+|+++.++.+....  ++...++|+..+.........                         .....+
T Consensus       802 S~d~~~i~~p~qS~sp~ss~p~~pa~--sgh~~~~~v~~~ap~i~~~~~-------------------------~s~r~~  854 (1205)
T KOG0606|consen  802 SPDGFEITKPSQSGSPSSSFPASPAG--SGHTRPSKVHGLAPKIRTNDY-------------------------ESIRSK  854 (1205)
T ss_pred             CCccceecccccCCCCcccccCCccc--cccccchhhhccchhhccccc-------------------------cccCCc
Confidence            45677788899999999999987766  566677776544322111000                         000011


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecc
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRD  167 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~d  167 (521)
                      -.++-     ...||.++.....+......+++++|+.|++|...+...+..+++-++..+..+..+++|||+..+.|+|
T Consensus       855 s~~~i-----~p~~P~v~~~~~s~~~rsP~~L~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~  929 (1205)
T KOG0606|consen  855 SNILI-----TPRSPAVVRSFPSFPCRSPLPLVGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSLRKHRD  929 (1205)
T ss_pred             cCccc-----cCCCCceecccCCCCCCCCcchhhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccchhhccc
Confidence            11110     0156777766666667788999999999999999999888888889999999999999999999999999


Q ss_pred             CCCCcEEEeeCCCCCCEEEeecCCCccCC----------CC----------------------CCcccccCCcccccccc
Q 009980          168 LKPENCLFLNDREDSPLKIMDFGLSSVEG----------YT----------------------DPVVGLFGSIDYVSPEA  215 (521)
Q Consensus       168 lkp~Nil~~~~~~~~~~kl~Dfg~a~~~~----------~~----------------------~~~~~~~gt~~y~aPE~  215 (521)
                      ++|.|++.   ...+..++.|||......          ..                      .......||+.|.+||.
T Consensus       930 ~~p~~~l~---~~~gh~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~ 1006 (1205)
T KOG0606|consen  930 LKPDSLLI---AYDGHRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEI 1006 (1205)
T ss_pred             ccccchhh---cccCCcccCccccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcc
Confidence            99999998   777889999998332110          00                      01223469999999999


Q ss_pred             cccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHH-
Q 009980          216 LLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQ-  294 (521)
Q Consensus       216 ~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~-  294 (521)
                      ..+...+..+|+|+.|+++++.++|.+||...+.....++|..+..+++.-. ...+.++++++.++|..+|.+|..+. 
T Consensus      1007 ~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~~f~ni~~~~~~~p~g~-~~~s~~aq~~~~~ll~~~~~qr~~a~~ 1085 (1205)
T KOG0606|consen 1007 LLGRRHGSAADWWSSGVCLFEVLTGIPPFNAETPQQIFENILNRDIPWPEGP-EEGSYEAQDLINRLLTEEPTQRLGAKG 1085 (1205)
T ss_pred             cccccCCCcchhhhhhhhhhhhhcCCCCCCCcchhhhhhccccCCCCCCCCc-cccChhhhhhhhhhhccCchhccCccc
Confidence            9999999999999999999999999999999999999999999888776533 45789999999999999999998877 


Q ss_pred             --HHHcCCcccCCCCc
Q 009980          295 --ELLNHPWVIGDSAK  308 (521)
Q Consensus       295 --~~l~h~~~~~~~~~  308 (521)
                        +.-.||+|+.....
T Consensus      1086 ~~e~k~~~~~~~~~~~ 1101 (1205)
T KOG0606|consen 1086 AAEVKGHPFFQDVDWE 1101 (1205)
T ss_pred             ccccccCCccCCCCcc
Confidence              88899999876543

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.63  E-value=1.6e-15  Score=131.84  Aligned_cols=132  Identities=23%  Similarity=0.225  Sum_probs=109.2

Q ss_pred             ecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHH
Q 009980           14 VTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRK   93 (521)
Q Consensus        14 ~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~   93 (521)
                      +.+.||.|.++.||++...    +..+++|.......                              ...+..|+.+++.
T Consensus         2 ~~~~i~~g~~~~v~~~~~~----~~~~~iK~~~~~~~------------------------------~~~~~~e~~~~~~   47 (155)
T cd05120           2 SIKLLKGGLTNRVYLLGTK----DEDYVLKINPSREK------------------------------GADREREVAILQL   47 (155)
T ss_pred             cceecccccccceEEEEec----CCeEEEEecCCCCc------------------------------hhHHHHHHHHHHH
Confidence            4678999999999999874    35799999753211                              2347889999999


Q ss_pred             HhhccCCC--CCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccC
Q 009980           94 IVENVSPH--PNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQA---NIVHRDL  168 (521)
Q Consensus        94 l~~~~~~h--pniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~---~i~H~dl  168 (521)
                      +     .|  +++++++.++...+..+++|||+.|+++...       +......++.+++.++.++|..   +++|+|+
T Consensus        48 l-----~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~~~~-------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl  115 (155)
T cd05120          48 L-----ARKGLPVPKVLASGESDGWSYLLMEWIEGETLDEV-------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDL  115 (155)
T ss_pred             H-----HHcCCCCCeEEEEcCCCCccEEEEEecCCeecccC-------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCC
Confidence            8     44  6899999988888899999999999877543       5567778899999999999985   7999999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCcc
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSSV  194 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~~  194 (521)
                      +|+||++   +..+.++++|||.+..
T Consensus       116 ~~~Nil~---~~~~~~~l~Df~~~~~  138 (155)
T cd05120         116 HPGNILV---DDGKILGIIDWEYAGY  138 (155)
T ss_pred             CcceEEE---ECCcEEEEEecccccC
Confidence            9999999   4567899999998875

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]

Probab=99.62  E-value=2.5e-15  Score=122.87  Aligned_cols=116  Identities=20%  Similarity=0.352  Sum_probs=106.6

Q ss_pred             chHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHh-CCCCCCCCCCCChh
Q 009980          400 PLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRA-LPDDCLPVDITEPG  478 (521)
Q Consensus       400 ~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~-~~~~~~~~~~~~~~  478 (521)
                      .+++..|..||.+++|.|+++|+..+++.++.....+++..+..-+|++++|.|++++|+..+.. ++..      .+.+
T Consensus        33 q~i~e~f~lfd~~~~g~iD~~EL~vAmralGFE~~k~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~e~------dt~e  106 (172)
T KOG0028|consen   33 QEIKEAFELFDPDMAGKIDVEELKVAMRALGFEPKKEEILKLLADVDKEGSGKITFEDFRRVMTVKLGER------DTKE  106 (172)
T ss_pred             hhHHHHHHhhccCCCCcccHHHHHHHHHHcCCCcchHHHHHHHHhhhhccCceechHHHHHHHHHHHhcc------CcHH
Confidence            47788999999999999999999999999999999999999999999999999999999998764 3333      3677


Q ss_pred             HHHHHHHHhcCCCCcceeHHHHHHHHhc-CccHHHHHHHhhhhC
Q 009980          479 KLDEIFDLMDANNDGKVTFDEFRAAMQR-DSSLQDVVLSSLRQQ  521 (521)
Q Consensus       479 ~~~~~f~~~D~~~dG~I~~~Ef~~~~~~-~~~~~~~~~~~~~~~  521 (521)
                      ++..+|+.+|.|++|+|++.+|+.++.. +++++++++.+||.+
T Consensus       107 Ei~~afrl~D~D~~Gkis~~~lkrvakeLgenltD~El~eMIeE  150 (172)
T KOG0028|consen  107 EIKKAFRLFDDDKTGKISQRNLKRVAKELGENLTDEELMEMIEE  150 (172)
T ss_pred             HHHHHHHcccccCCCCcCHHHHHHHHHHhCccccHHHHHHHHHH
Confidence            9999999999999999999999999999 999999999999864

>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]

Probab=99.62  E-value=4.4e-15  Score=125.04  Aligned_cols=115  Identities=22%  Similarity=0.336  Sum_probs=105.5

Q ss_pred             hHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHH
Q 009980          401 LAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKL  480 (521)
Q Consensus       401 ~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~  480 (521)
                      +++++|+.+|+|++|.|++.++..+++.++..+++..+..+|..+|. +.|.|++.+|..++......     ..+++++
T Consensus        21 ~lkeaF~l~D~d~~G~I~~~el~~ilr~lg~~~s~~ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~~~-----~~~~Eel   94 (160)
T COG5126          21 ELKEAFQLFDRDSDGLIDRNELGKILRSLGFNPSEAEINKLFEEIDA-GNETVDFPEFLTVMSVKLKR-----GDKEEEL   94 (160)
T ss_pred             HHHHHHHHhCcCCCCCCcHHHHHHHHHHcCCCCcHHHHHHHHHhccC-CCCccCHHHHHHHHHHHhcc-----CCcHHHH
Confidence            56789999999999999999999999999999999999999999999 99999999999999864322     1457799


Q ss_pred             HHHHHHhcCCCCcceeHHHHHHHHhc-CccHHHHHHHhhhhC
Q 009980          481 DEIFDLMDANNDGKVTFDEFRAAMQR-DSSLQDVVLSSLRQQ  521 (521)
Q Consensus       481 ~~~f~~~D~~~dG~I~~~Ef~~~~~~-~~~~~~~~~~~~~~~  521 (521)
                      ..+|+.+|+|+||+|+..|++.+++. ++.+++++++.|+++
T Consensus        95 ~~aF~~fD~d~dG~Is~~eL~~vl~~lge~~~deev~~ll~~  136 (160)
T COG5126          95 REAFKLFDKDHDGYISIGELRRVLKSLGERLSDEEVEKLLKE  136 (160)
T ss_pred             HHHHHHhCCCCCceecHHHHHHHHHhhcccCCHHHHHHHHHh
Confidence            99999999999999999999999999 999999999999864

>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]

Probab=99.62  E-value=1.1e-14  Score=136.96  Aligned_cols=146  Identities=23%  Similarity=0.355  Sum_probs=128.6

Q ss_pred             CCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCC-CCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHH
Q 009980          359 LNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMS-SLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDD  436 (521)
Q Consensus       359 ~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~-~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~  436 (521)
                      .+++.-.+++.+|+.+|.+++| ++..++...+..+... +..+.+..+|+..|.|.||.++|.||...+..     .+.
T Consensus         8 ~~~er~~r~~~lf~~lD~~~~g~~d~~~l~k~~~~l~~~~~~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~~-----~E~   82 (463)
T KOG0036|consen    8 TDEERDIRIRCLFKELDSKNDGQVDLDQLEKGLEKLDHPKPNYEAAKMLFSAMDANRDGRVDYSEFKRYLDN-----KEL   82 (463)
T ss_pred             CcHHHHHHHHHHHHHhccCCCCceeHHHHHHHHHhcCCCCCchHHHHHHHHhcccCcCCcccHHHHHHHHHH-----hHH
Confidence            4555566889999999999999 9999999999998766 55567789999999999999999999998863     466


Q ss_pred             HHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhcCccHHHHHHH
Q 009980          437 ALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDSSLQDVVLS  516 (521)
Q Consensus       437 ~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~~~~~~~~~~~  516 (521)
                      ++..+|+.+|.++||.|+.+|+...+..++.+      ++++++..+|+.+|+++++.|+++||.+.+..+|   +.+++
T Consensus        83 ~l~~~F~~iD~~hdG~i~~~Ei~~~l~~~gi~------l~de~~~k~~e~~d~~g~~~I~~~e~rd~~ll~p---~s~i~  153 (463)
T KOG0036|consen   83 ELYRIFQSIDLEHDGKIDPNEIWRYLKDLGIQ------LSDEKAAKFFEHMDKDGKATIDLEEWRDHLLLYP---ESDLE  153 (463)
T ss_pred             HHHHHHhhhccccCCccCHHHHHHHHHHhCCc------cCHHHHHHHHHHhccCCCeeeccHHHHhhhhcCC---hhHHH
Confidence            89999999999999999999999999998876      7788999999999999999999999999999877   44555


Q ss_pred             hh
Q 009980          517 SL  518 (521)
Q Consensus       517 ~~  518 (521)
                      .+
T Consensus       154 di  155 (463)
T KOG0036|consen  154 DI  155 (463)
T ss_pred             HH
Confidence            54

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.61  E-value=6.8e-16  Score=153.85  Aligned_cols=257  Identities=24%  Similarity=0.226  Sum_probs=192.5

Q ss_pred             ccccceeecccccc--cCceEEEEeEE--ccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHH
Q 009980            7 KLTDEYEVTDILGR--GGFSVVRRGIK--KTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDA   82 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~--G~~g~V~~a~~--~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (521)
                      .+...+.+.+.+|.  |.+|.||.+.+  +.  ++..+|+|.-+.-.....                          ...
T Consensus       111 ~~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~--s~~~~a~k~s~~p~s~p~--------------------------~~~  162 (524)
T KOG0601|consen  111 FFDQRFPISSRTGSLPGSKGSVFKSRCTNSE--SPHKFAVKKSKIPFSPPL--------------------------DSK  162 (524)
T ss_pred             hhhhhcccccccccCCCCCceeecccCCccc--CCcccccccccCCCCCcc--------------------------ccc
Confidence            34556677888999  99999999998  65  778899987432111100                          011


Q ss_pred             HHHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCC-CCHHHHHHHHHHHHH----HHHH
Q 009980           83 LLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQER-YMEVGAAAVIRQIAE----GLAA  157 (521)
Q Consensus        83 ~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~-~~~~~~~~i~~qil~----al~~  157 (521)
                      .-.+|.....++    ..|+|.++.+..++..+..|+-+|+|. .+|.++...... +++..++..+.+...    ||.+
T Consensus       163 ~k~~~~~s~~~i----~~~~~~v~~~~~~e~~~~lfiqtE~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~  237 (524)
T KOG0601|consen  163 RKLREFLSHHKI----DSHENPVRDSPAWEGSGILFIQTELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSH  237 (524)
T ss_pred             cccchhhccccc----CccccccccCcccccCCcceeeecccc-chhHHhhhcccccCCchhhhhHHhhhhhcccccccc
Confidence            123344444444    489999999999999999999999995 688777765544 889999999999999    9999


Q ss_pred             HHHCCCeeccCCCCcEEEeeCCCC-CCEEEeecCCCccCCCCCCc------ccccCCcccccccccccCCCCchhhhHHH
Q 009980          158 LHQANIVHRDLKPENCLFLNDRED-SPLKIMDFGLSSVEGYTDPV------VGLFGSIDYVSPEALLQDRITSKSDMWSL  230 (521)
Q Consensus       158 lH~~~i~H~dlkp~Nil~~~~~~~-~~~kl~Dfg~a~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~Diwsl  230 (521)
                      +|+.+++|-|+||.||+.   ..+ ...+++|||+..........      ....|...|++||... +-++...|++++
T Consensus       238 ~hs~~~~~~~~kp~~i~~---~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl  313 (524)
T KOG0601|consen  238 LHSNNIVHDDLKPANIFT---TSDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSL  313 (524)
T ss_pred             cCCCcccccccchhheec---ccccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcch
Confidence            999999999999999999   555 77999999998765543311      1225778899999885 568999999999


Q ss_pred             HHHHHHHHhCCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCccc
Q 009980          231 GVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVI  303 (521)
Q Consensus       231 G~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~  303 (521)
                      |.+..+..+|..++...-.....+ +..+  ..+.......+..+...+..|+..+|-.|++++.+++|+++.
T Consensus       314 ~ev~l~~~l~~~~~~~g~~~~W~~-~r~~--~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~  383 (524)
T KOG0601|consen  314 GEVILEAILGSHLPSVGKNSSWSQ-LRQG--YIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIH  383 (524)
T ss_pred             hhhhHhhHhhcccccCCCCCCccc-cccc--cCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhcccccc
Confidence            999888888776664441111110 1111  134444556778888899999999999999999999999986

>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.60  E-value=1.7e-14  Score=124.98  Aligned_cols=139  Identities=21%  Similarity=0.328  Sum_probs=121.4

Q ss_pred             HHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCC-CCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHH
Q 009980          364 IQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMS-SLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLC  441 (521)
Q Consensus       364 ~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~-~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~  441 (521)
                      ...+...|...|.|+.| |+.+|++.+|...+.+ .+.+-++.+...||.+++|+|+++||..++..+.      .++.+
T Consensus        56 ~~~~~~~f~~vD~d~sg~i~~~eLq~aLsn~~~~~Fs~~TcrlmI~mfd~~~~G~i~f~EF~~Lw~~i~------~Wr~v  129 (221)
T KOG0037|consen   56 FPQLAGWFQSVDRDRSGRILAKELQQALSNGTWSPFSIETCRLMISMFDRDNSGTIGFKEFKALWKYIN------QWRNV  129 (221)
T ss_pred             cHHHHHHHHhhCccccccccHHHHHHHhhcCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHH------HHHHH
Confidence            45678889999999999 9999999999866443 3456788999999999999999999999987653      59999


Q ss_pred             hHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhcCccHHHHH
Q 009980          442 FQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDSSLQDVV  514 (521)
Q Consensus       442 f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~~~~~~~~~  514 (521)
                      |+.||+|++|.|+..||+.++..+|..      ++++-.+.+++.+|.-++|.|.|++|+.++..-..+|+-+
T Consensus       130 F~~~D~D~SG~I~~sEL~~Al~~~Gy~------Lspq~~~~lv~kyd~~~~g~i~FD~FI~ccv~L~~lt~~F  196 (221)
T KOG0037|consen  130 FRTYDRDRSGTIDSSELRQALTQLGYR------LSPQFYNLLVRKYDRFGGGRIDFDDFIQCCVVLQRLTEAF  196 (221)
T ss_pred             HHhcccCCCCcccHHHHHHHHHHcCcC------CCHHHHHHHHHHhccccCCceeHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999886      7888899999999988899999999999998755555443

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=99.55  E-value=2.5e-14  Score=145.09  Aligned_cols=172  Identities=20%  Similarity=0.171  Sum_probs=105.0

Q ss_pred             cccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCC---------CCCCCCCCC---ccccccccccccccHH
Q 009980           15 TDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFP---------GSRGSSSSS---QIGFFPTRKQVSVSDA   82 (521)
Q Consensus        15 ~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~---------~~~~~~~~~---~~~~~~~~~~~~~~~~   82 (521)
                      .+.||.|++|.||+|+.+   +|+.||||+.+......-....         ..+......   ...........-..+-
T Consensus       122 ~~plasaSigQVh~A~l~---~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~El  198 (437)
T TIGR01982       122 EKPLAAASIAQVHRARLV---DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRREL  198 (437)
T ss_pred             CcceeeeehhheEEEEec---CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHH
Confidence            367999999999999986   5789999998543110000000         000000000   0000000000001122


Q ss_pred             HHHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHH-HHHHHHH
Q 009980           83 LLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAE-GLAALHQ  160 (521)
Q Consensus        83 ~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~-al~~lH~  160 (521)
                      .+.+|...+.++...+.++|+|.-..-+....+..+|||||++|++|.+..... ...   ....++.+++. .+..+|.
T Consensus       199 df~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~---~~~~ia~~~~~~~l~ql~~  275 (437)
T TIGR01982       199 DLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGL---DRKALAENLARSFLNQVLR  275 (437)
T ss_pred             CHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCC---CHHHHHHHHHHHHHHHHHh
Confidence            366778888888666666676532222233344578999999999998876432 112   23345555555 4678899


Q ss_pred             CCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccC
Q 009980          161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVE  195 (521)
Q Consensus       161 ~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~  195 (521)
                      .|++|+|+||.||++   ..++.++++|||++...
T Consensus       276 ~g~~H~D~hPgNilv---~~~g~i~liDfG~~~~l  307 (437)
T TIGR01982       276 DGFFHADLHPGNIFV---LKDGKIIALDFGIVGRL  307 (437)
T ss_pred             CCceeCCCCcccEEE---CCCCcEEEEeCCCeeEC
Confidence            999999999999999   66788999999998654

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=99.54  E-value=1.9e-13  Score=121.66  Aligned_cols=166  Identities=14%  Similarity=0.138  Sum_probs=107.6

Q ss_pred             ecccccccCceEEEEeEEccC----CCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHH----H
Q 009980           14 VTDILGRGGFSVVRRGIKKTC----GETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALL----T   85 (521)
Q Consensus        14 ~~~~lG~G~~g~V~~a~~~~~----~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~   85 (521)
                      +...||.|.-+.||.|.....    ..+..+|||+.+.....-    .+.........  .+............+    +
T Consensus         1 ~~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~F----k~~~~y~~~~~--rf~~~~~k~~~~~~~~~wa~   74 (197)
T cd05146           1 INGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEF----KNRDKYIKDDY--RFKDRFSKLNPRKIIRMWAE   74 (197)
T ss_pred             CCCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeE----cChhhhccCCc--ccccCcCCCCHHHHHHHHHH
Confidence            356899999999999986531    124789999987432211    00000000000  000000001112333    4


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHH-HHCCCe
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAAL-HQANIV  164 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~l-H~~~i~  164 (521)
                      +|.+.|.++...-   -++++++++    ...+|||||+.|+.+.....+...+++.++..+..+++.+|..| |..||+
T Consensus        75 kE~r~L~rl~~~G---v~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~glV  147 (197)
T cd05146          75 KEMHNLKRMQKAG---IPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKECNLV  147 (197)
T ss_pred             HHHHHHHHHHHcC---CCCCeEEEe----cCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhCCee
Confidence            8999999995532   345555554    45689999997754533223334566777888899999999999 899999


Q ss_pred             eccCCCCcEEEeeCCCCCCEEEeecCCCccCC
Q 009980          165 HRDLKPENCLFLNDREDSPLKIMDFGLSSVEG  196 (521)
Q Consensus       165 H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~  196 (521)
                      |+||+|.||++.    ++.+.|+|||.|....
T Consensus       148 HGDLs~~NIL~~----~~~v~iIDF~qav~~~  175 (197)
T cd05146         148 HADLSEYNMLWH----DGKVWFIDVSQSVEPT  175 (197)
T ss_pred             cCCCCHHHEEEE----CCcEEEEECCCceeCC
Confidence            999999999992    4679999999887543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.52  E-value=2.1e-14  Score=132.06  Aligned_cols=195  Identities=21%  Similarity=0.234  Sum_probs=141.9

Q ss_pred             CCCCccceeEEEEeC-----CeEEEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC--CCeeccC
Q 009980          100 PHPNVIDLYDVYEDQ-----NGVHLILELCSGGELFDRIVA----QERYMEVGAAAVIRQIAEGLAALHQA--NIVHRDL  168 (521)
Q Consensus       100 ~hpniv~~~~~~~~~-----~~~~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qil~al~~lH~~--~i~H~dl  168 (521)
                      .|.|||+++.+|.+.     ....+++||+..|++..++.+    ...++.....+|+.||+.||.|||+.  -|+|+++
T Consensus       125 vHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Ppiihgnl  204 (458)
T KOG1266|consen  125 VHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNL  204 (458)
T ss_pred             HHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCc
Confidence            799999999998654     458899999999999998864    34688999999999999999999998  4999999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCccCC-----CCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCC
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSSVEG-----YTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPP  243 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~-----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~p  243 (521)
                      ..+.|++   ..++.+|+.---......     .........|.++|.|||.=.....+.++|||++|....+|..|..-
T Consensus       205 Tc~tifi---q~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailEiq  281 (458)
T KOG1266|consen  205 TCDTIFI---QHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILEIQ  281 (458)
T ss_pred             chhheee---cCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHheec
Confidence            9999999   677778875322211100     00011123467889999966555667789999999999999887653


Q ss_pred             -CCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccC
Q 009980          244 -FIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIG  304 (521)
Q Consensus       244 -f~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~  304 (521)
                       -.+.+..+....+.+..+....       .--+.++.+||+..|..||++..++.||.+..
T Consensus       282 ~tnseS~~~~ee~ia~~i~~len-------~lqr~~i~kcl~~eP~~rp~ar~llfHpllfe  336 (458)
T KOG1266|consen  282 STNSESKVEVEENIANVIIGLEN-------GLQRGSITKCLEGEPNGRPDARLLLFHPLLFE  336 (458)
T ss_pred             cCCCcceeehhhhhhhheeeccC-------ccccCcCcccccCCCCCCcchhhhhcCceeee
Confidence             2333332333333332222111       11247899999999999999999999998753

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=99.50  E-value=9.1e-14  Score=142.42  Aligned_cols=181  Identities=18%  Similarity=0.207  Sum_probs=107.8

Q ss_pred             CccccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCC---------------CCCCCCCCCCCCC
Q 009980            2 GQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTP---------------YGFPGSRGSSSSS   66 (521)
Q Consensus         2 ~~~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~---------------~~~~~~~~~~~~~   66 (521)
                      |+..+.+...|+. +.||+|++|.||+|+.+.  +|+.||||+.++.....-               .-.+..+..   .
T Consensus       112 G~~~~~~F~~fd~-~PlasaSiaQVh~A~l~~--~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l---~  185 (537)
T PRK04750        112 GGPVEEWFDDFDI-KPLASASIAQVHFARLKD--NGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRL---K  185 (537)
T ss_pred             CCCHHHHHHhcCh-hhhcCCCccEEEEEEECC--CCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccC---C
Confidence            3444555567776 899999999999999986  689999999975321000               000000000   0


Q ss_pred             ccccccccccccccHHHHHHHHHHHHHHhhccCCCCCccceeEEEE-eCCeEEEEEeccCCCchHHH--HHhcC----CC
Q 009980           67 QIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYE-DQNGVHLILELCSGGELFDR--IVAQE----RY  139 (521)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~hpniv~~~~~~~-~~~~~~lv~e~~~gg~L~~~--l~~~~----~~  139 (521)
                      ......+....-..+-.+.+|...+.++.....+.+ .+.+-.+|. -....+|||||+.|+++.+.  +...+    .+
T Consensus       186 ~~~~v~e~~~~l~~ElD~~~Ea~N~~~~~~~f~~~~-~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~l  264 (537)
T PRK04750        186 PREVVAEFEKTLHDELDLMREAANASQLRRNFEDSD-MLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLL  264 (537)
T ss_pred             HHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHccCCC-CeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHH
Confidence            000000000111112235566666666654443333 333333332 25567899999999999764  33333    25


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEeeCC-CCCCEEEeecCCCccCC
Q 009980          140 MEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDR-EDSPLKIMDFGLSSVEG  196 (521)
Q Consensus       140 ~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~~~~~-~~~~~kl~Dfg~a~~~~  196 (521)
                      .+..+..++.|++       ..|++|+|+||.||++..+. ..+.++++|||++...+
T Consensus       265 a~~~v~~~~~Qif-------~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~  315 (537)
T PRK04750        265 AERGVEVFFTQVF-------RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN  315 (537)
T ss_pred             HHHHHHHHHHHHH-------hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence            5555666666664       58999999999999993321 12389999999987653

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=99.48  E-value=8.9e-12  Score=125.84  Aligned_cols=184  Identities=18%  Similarity=0.287  Sum_probs=133.5

Q ss_pred             ceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHH
Q 009980           11 EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILV   90 (521)
Q Consensus        11 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   90 (521)
                      -|++ ...+-++.+..-.|..+.  ++.+|.|........                            .......+-+..
T Consensus        14 pY~l-e~~~~~~~a~~~~~t~k~--~~~~vsVF~~~~~~~----------------------------~~~~~~~~A~k~   62 (690)
T KOG1243|consen   14 PYDL-EETAFSSEALWPDGTRKA--DGGPVSVFVYKRSNG----------------------------EVTELAKRAVKR   62 (690)
T ss_pred             Cccc-ccccCCCcccccccceec--cCCceEEEEEeCCCc----------------------------hhhHHHHHHHHH
Confidence            3555 445555555322355555  778899998865322                            112345667778


Q ss_pred             HHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HCCCeeccCC
Q 009980           91 MRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALH-QANIVHRDLK  169 (521)
Q Consensus        91 l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH-~~~i~H~dlk  169 (521)
                      |+.+     +||||+++++.++..+..|||+|-+.  .|..++.+.   +...+...+.||+.||.||| ..+++|++|.
T Consensus        63 lKtl-----RHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l---~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~  132 (690)
T KOG1243|consen   63 LKTL-----RHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKEL---GKEEVCLGLFQILAALSFLNDDCNLVHGNVC  132 (690)
T ss_pred             hhhc-----cCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHh---HHHHHHHHHHHHHHHHHHHhccCCeeeccEe
Confidence            8888     99999999999999999999999985  466666653   47888899999999999998 5689999999


Q ss_pred             CCcEEEeeCCCCCCEEEeecCCCccCCCCCC-cccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhC
Q 009980          170 PENCLFLNDREDSPLKIMDFGLSSVEGYTDP-VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSG  240 (521)
Q Consensus       170 p~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g  240 (521)
                      ...|++   +..|..||++|..+........ .....---.|..|+.+...  .-..|.|.|||++++++.|
T Consensus       133 ~~SVfV---n~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~s--~~s~D~~~Lg~li~el~ng  199 (690)
T KOG1243|consen  133 KDSVFV---NESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDPS--EWSIDSWGLGCLIEELFNG  199 (690)
T ss_pred             eeeEEE---cCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcCcc--ccchhhhhHHHHHHHHhCc
Confidence            999999   8889999999988754332221 1111112236667655322  2456999999999999999

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.46  E-value=4.1e-14  Score=141.24  Aligned_cols=258  Identities=24%  Similarity=0.247  Sum_probs=187.6

Q ss_pred             ccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHH
Q 009980            5 TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALL   84 (521)
Q Consensus         5 ~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (521)
                      +.....++..+..||.|.|+.|+.+..+. ..+..|++|...+.....                          ..+..-
T Consensus       260 ~s~~~~df~~v~~i~~~~~~~~~~~~~r~-~~~~~Y~~ke~~~~l~~~--------------------------~~di~s  312 (524)
T KOG0601|consen  260 TSCKLTDFGLVSKISDGNFSSVFKVSKRP-EGDCIYAAKELLNGLATF--------------------------ASDIFS  312 (524)
T ss_pred             ceeecCCcceeEEccCCccccceeeeecC-CCCceEeChhhhccccch--------------------------Hhhhcc
Confidence            34456678889999999999999987542 256778998875432221                          111123


Q ss_pred             HHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 009980           85 TNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIV  164 (521)
Q Consensus        85 ~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~  164 (521)
                      ..|+.+...+    .-|+++++.+..|....+.|+=-|||+|+++...+.....+.+...+.+..|++.++.++|++.++
T Consensus       313 l~ev~l~~~l----~~~~~~~g~~~~W~~~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~  388 (524)
T KOG0601|consen  313 LGEVILEAIL----GSHLPSVGKNSSWSQLRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFV  388 (524)
T ss_pred             hhhhhHhhHh----hcccccCCCCCCccccccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhhh
Confidence            4566666555    479999999999988888899999999999887775556688889999999999999999999999


Q ss_pred             eccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCccc-ccccccccCCCCchhhhHHHHHHHHHHHhCCCC
Q 009980          165 HRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDY-VSPEALLQDRITSKSDMWSLGVILYILLSGYPP  243 (521)
Q Consensus       165 H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y-~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~p  243 (521)
                      |+|++|+||++.+++  +..++.|||.++....... ....++..| .+|.......+..+.|++|||..+.+..+|.+.
T Consensus       389 ~~d~~psni~i~~~~--~~~~~~~~~~~t~~~~~~~-~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~l  465 (524)
T KOG0601|consen  389 HLDVKPSNILISNDG--FFSKLGDFGCWTRLAFSSG-VFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPL  465 (524)
T ss_pred             cccccccceeeccch--hhhhccccccccccceecc-cccccccccccchhhccccccccccccccccccccccccCccc
Confidence            999999999995433  7889999999875322111 111123334 355555566778999999999999999998764


Q ss_pred             CCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCccc
Q 009980          244 FIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVI  303 (521)
Q Consensus       244 f~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~  303 (521)
                      -.....   ...|..+..+..    .+.+.++..+...++..++..||.+.++..|+-+.
T Consensus       466 s~~~~~---~~~i~~~~~p~~----~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~  518 (524)
T KOG0601|consen  466 SESGVQ---SLTIRSGDTPNL----PGLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFY  518 (524)
T ss_pred             Cccccc---ceeeecccccCC----CchHHhhhhhhhhhcCCccccchhhhhhcccchhh
Confidence            332221   222333433222    33457788899999999999999999998887553

>PTZ00183 centrin; Provisional

Probab=99.42  E-value=1.6e-12  Score=113.89  Aligned_cols=115  Identities=22%  Similarity=0.362  Sum_probs=99.9

Q ss_pred             hHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHH
Q 009980          401 LAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKL  480 (521)
Q Consensus       401 ~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~  480 (521)
                      .+..+|..+|.+++|.|++.||..++..++.......+..+|+.+|.+++|.|+++||..++......     ...++.+
T Consensus        18 ~~~~~F~~~D~~~~G~i~~~e~~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~-----~~~~~~l   92 (158)
T PTZ00183         18 EIREAFDLFDTDGSGTIDPKELKVAMRSLGFEPKKEEIKQMIADVDKDGSGKIDFEEFLDIMTKKLGE-----RDPREEI   92 (158)
T ss_pred             HHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHhcC-----CCcHHHH
Confidence            56778999999999999999999999888766778889999999999999999999999987653211     1345689


Q ss_pred             HHHHHHhcCCCCcceeHHHHHHHHhc-CccHHHHHHHhhhh
Q 009980          481 DEIFDLMDANNDGKVTFDEFRAAMQR-DSSLQDVVLSSLRQ  520 (521)
Q Consensus       481 ~~~f~~~D~~~dG~I~~~Ef~~~~~~-~~~~~~~~~~~~~~  520 (521)
                      ..+|+.+|.+++|.|+.+||..++.. ++.+++.++..++.
T Consensus        93 ~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~l~~~~~~~~~~  133 (158)
T PTZ00183         93 LKAFRLFDDDKTGKISLKNLKRVAKELGETITDEELQEMID  133 (158)
T ss_pred             HHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence            99999999999999999999999988 78889999888774

>KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only]

Probab=99.41  E-value=2.1e-12  Score=103.58  Aligned_cols=157  Identities=19%  Similarity=0.369  Sum_probs=121.1

Q ss_pred             HHHHHhhhccCCCCHHHHHHHHHHHHhhhcCCCC------------CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCC
Q 009980          347 TKKLKNLLGSHDLNEEEIQNLRIHFRTICANGDN------------ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRD  414 (521)
Q Consensus       347 ~~~l~~l~~~~~~~~~~~~~l~~~F~~~D~~~~g------------i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~  414 (521)
                      .+++.++.....++.+++-++...|..+.++--.            +..+ +..-+..+.   ..+.-+++...|..||+
T Consensus        10 ~eqLd~YQDCTFFtrKdIlrl~~Rf~~L~P~lVP~~~~~~~~~~v~vp~e-~i~kMPELk---enpfk~ri~e~FSeDG~   85 (189)
T KOG0038|consen   10 EEQLDEYQDCTFFTRKDILRLHKRFYELAPHLVPTDMTGNRPPIVKVPFE-LIEKMPELK---ENPFKRRICEVFSEDGR   85 (189)
T ss_pred             HHHHhhhcccccccHHHHHHHHHHHHHhCcccccccccCCCCCceeecHH-HHhhChhhh---cChHHHHHHHHhccCCC
Confidence            4567888888899999999999999888655321            1222 222222222   23456788888899999


Q ss_pred             cceeHHHHHHHHhhccCC-CcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhH----HHHHHHHhcC
Q 009980          415 GTVDMREILCGFSSLRKS-QGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGK----LDEIFDLMDA  489 (521)
Q Consensus       415 g~I~~~ef~~~~~~~~~~-~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~----~~~~f~~~D~  489 (521)
                      |.++|++|+.+++-+... +.+-++..+|+.+|-|+|++|..+++...+..+....     +++++    .+.++.+.|.
T Consensus        86 GnlsfddFlDmfSV~sE~APrdlK~~YAFkIYDfd~D~~i~~~DL~~~l~~lTr~e-----Ls~eEv~~i~ekvieEAD~  160 (189)
T KOG0038|consen   86 GNLSFDDFLDMFSVFSEMAPRDLKAKYAFKIYDFDGDEFIGHDDLEKTLTSLTRDE-----LSDEEVELICEKVIEEADL  160 (189)
T ss_pred             CcccHHHHHHHHHHHHhhChHHhhhhheeEEeecCCCCcccHHHHHHHHHHHhhcc-----CCHHHHHHHHHHHHHHhcC
Confidence            999999999999876544 4455788999999999999999999999998876542     44444    5667888999


Q ss_pred             CCCcceeHHHHHHHHhcCccHHH
Q 009980          490 NNDGKVTFDEFRAAMQRDSSLQD  512 (521)
Q Consensus       490 ~~dG~I~~~Ef~~~~~~~~~~~~  512 (521)
                      ||||++++.||.+++.+.|++..
T Consensus       161 DgDgkl~~~eFe~~i~raPDFls  183 (189)
T KOG0038|consen  161 DGDGKLSFAEFEHVILRAPDFLS  183 (189)
T ss_pred             CCCCcccHHHHHHHHHhCcchHh
Confidence            99999999999999999887653

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.40  E-value=2.4e-12  Score=114.27  Aligned_cols=128  Identities=21%  Similarity=0.203  Sum_probs=93.5

Q ss_pred             cccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHH
Q 009980           15 TDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKI   94 (521)
Q Consensus        15 ~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l   94 (521)
                      .+.|+.|.++.||++...    +..|++|+......                             ....+..|..+++.+
T Consensus         3 ~~~l~~G~~~~vy~~~~~----~~~~~lK~~~~~~~-----------------------------~~~~~~~E~~~l~~l   49 (170)
T cd05151           3 ISPLKGGMTNKNYRVEVA----NKKYVVRIPGNGTE-----------------------------LLINRENEAENSKLA   49 (170)
T ss_pred             eeecCCcccCceEEEEEC----CeEEEEEeCCCCcc-----------------------------cccCHHHHHHHHHHH
Confidence            467899999999999863    56799999743211                             011257889999888


Q ss_pred             hhccCCCCC-ccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCC-----eeccC
Q 009980           95 VENVSPHPN-VIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANI-----VHRDL  168 (521)
Q Consensus        95 ~~~~~~hpn-iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i-----~H~dl  168 (521)
                           .+.+ +++++.+..  ...++||||++|.++.+.        ......++.+++.+|..||+.++     +|+|+
T Consensus        50 -----~~~~~~P~~~~~~~--~~~~lv~e~i~G~~l~~~--------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~  114 (170)
T cd05151          50 -----AEAGIGPKLYYFDP--ETGVLITEFIEGSELLTE--------DFSDPENLEKIAKLLKKLHSSPLPDLVPCHNDL  114 (170)
T ss_pred             -----HHhCCCCceEEEeC--CCCeEEEEecCCCccccc--------cccCHHHHHHHHHHHHHHhCCCCCCceeecCCC
Confidence                 3333 445555433  345799999999887543        11123457899999999999985     99999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCcc
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSSV  194 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~~  194 (521)
                      +|.||++   + ++.++++|||.+..
T Consensus       115 ~~~Nil~---~-~~~~~liDf~~a~~  136 (170)
T cd05151         115 LPGNFLL---D-DGRLWLIDWEYAGM  136 (170)
T ss_pred             CcCcEEE---E-CCeEEEEecccccC
Confidence            9999999   3 45799999998764

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]

Probab=99.39  E-value=1.7e-12  Score=103.72  Aligned_cols=118  Identities=14%  Similarity=0.152  Sum_probs=106.7

Q ss_pred             chHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccC--CCcceeHHHHHHHHHhCCCCCCCCCCCCh
Q 009980          400 PLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDID--RSGCITKEEVASMLRALPDDCLPVDITEP  477 (521)
Q Consensus       400 ~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d--~~G~I~~~e~~~~l~~~~~~~~~~~~~~~  477 (521)
                      ++.+++|..||..+||+|++...-.+++.++.++++.++.++...++++  +--.|++++|..++..+..+...   .+-
T Consensus        11 ~e~ke~F~lfD~~gD~ki~~~q~gdvlRalG~nPT~aeV~k~l~~~~~~~~~~~rl~FE~fLpm~q~vaknk~q---~t~   87 (152)
T KOG0030|consen   11 EEFKEAFLLFDRTGDGKISGSQVGDVLRALGQNPTNAEVLKVLGQPKRREMNVKRLDFEEFLPMYQQVAKNKDQ---GTY   87 (152)
T ss_pred             HHHHHHHHHHhccCcccccHHHHHHHHHHhcCCCcHHHHHHHHcCcccchhhhhhhhHHHHHHHHHHHHhcccc---CcH
Confidence            6889999999999999999999999999999999999999999999987  56799999999999887654322   455


Q ss_pred             hHHHHHHHHhcCCCCcceeHHHHHHHHhc-CccHHHHHHHhhhh
Q 009980          478 GKLDEIFDLMDANNDGKVTFDEFRAAMQR-DSSLQDVVLSSLRQ  520 (521)
Q Consensus       478 ~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~-~~~~~~~~~~~~~~  520 (521)
                      +++.+-++.||++++|.|...|+++++.+ ++.+++++++.+++
T Consensus        88 edfvegLrvFDkeg~G~i~~aeLRhvLttlGekl~eeEVe~Lla  131 (152)
T KOG0030|consen   88 EDFVEGLRVFDKEGNGTIMGAELRHVLTTLGEKLTEEEVEELLA  131 (152)
T ss_pred             HHHHHHHHhhcccCCcceeHHHHHHHHHHHHhhccHHHHHHHHc
Confidence            68888999999999999999999999999 99999999998875

>PTZ00184 calmodulin; Provisional

Probab=99.38  E-value=4e-12  Score=110.14  Aligned_cols=115  Identities=23%  Similarity=0.361  Sum_probs=99.1

Q ss_pred             hHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHH
Q 009980          401 LAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKL  480 (521)
Q Consensus       401 ~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~  480 (521)
                      .+...|..+|.+++|.|+++||..++...+.....+.+..+|+.+|.+++|.|+++||..++......     ....+.+
T Consensus        12 ~~~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~-----~~~~~~~   86 (149)
T PTZ00184         12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTLMARKMKD-----TDSEEEI   86 (149)
T ss_pred             HHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCcCcHHHHHHHHHHhccC-----CcHHHHH
Confidence            45678999999999999999999999887777778899999999999999999999999988754321     1234578


Q ss_pred             HHHHHHhcCCCCcceeHHHHHHHHhc-CccHHHHHHHhhhh
Q 009980          481 DEIFDLMDANNDGKVTFDEFRAAMQR-DSSLQDVVLSSLRQ  520 (521)
Q Consensus       481 ~~~f~~~D~~~dG~I~~~Ef~~~~~~-~~~~~~~~~~~~~~  520 (521)
                      ..+|+.+|.|++|.|+.+||..++.. +..++.++++.++.
T Consensus        87 ~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~  127 (149)
T PTZ00184         87 KEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIR  127 (149)
T ss_pred             HHHHHhhCCCCCCeEeHHHHHHHHHHHCCCCCHHHHHHHHH
Confidence            99999999999999999999999988 77788888888764

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=99.36  E-value=4.7e-10  Score=110.02  Aligned_cols=211  Identities=18%  Similarity=0.232  Sum_probs=150.0

Q ss_pred             ceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHHhhccCCCC
Q 009980           23 FSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHP  102 (521)
Q Consensus        23 ~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~hp  102 (521)
                      -.+.|+|....  +|..|++|.++-.....+                            .....-+++.+++     .|+
T Consensus       289 ~~Ttyk~~s~~--DG~~YvLkRlhg~r~~~~----------------------------nk~t~lve~wkkl-----~h~  333 (655)
T KOG3741|consen  289 SITTYKATSNV--DGNAYVLKRLHGDRDQST----------------------------NKDTSLVEAWKKL-----CHT  333 (655)
T ss_pred             cceeEeeeecc--CCceeeeeeeccccccCc----------------------------ccchHHHHHHHHh-----ccC
Confidence            34679999988  788999999843222111                            1123446778888     999


Q ss_pred             CccceeEEEEe----CCeEEEEEeccCC-CchHHHHHh---------------cCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 009980          103 NVIDLYDVYED----QNGVHLILELCSG-GELFDRIVA---------------QERYMEVGAAAVIRQIAEGLAALHQAN  162 (521)
Q Consensus       103 niv~~~~~~~~----~~~~~lv~e~~~g-g~L~~~l~~---------------~~~~~~~~~~~i~~qil~al~~lH~~~  162 (521)
                      |||++.++|..    +..+++|++|.++ ++|.+....               +...+|..+|.++.|+..||.++|+.|
T Consensus       334 NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssG  413 (655)
T KOG3741|consen  334 NVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSG  413 (655)
T ss_pred             ceeehhhhhhhhccCcceEEEEEecCCCCchHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcC
Confidence            99999999973    4578999999886 677775532               234678999999999999999999999


Q ss_pred             CeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCC
Q 009980          163 IVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYP  242 (521)
Q Consensus       163 i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~  242 (521)
                      +.-+-|.|.+|++   .++..++|...|.........      +       +.+.   -..+-|.-.||.++..|.||..
T Consensus       414 LAck~L~~~kIlv---~G~~RIriS~C~i~Dvl~~d~------~-------~~le---~~Qq~D~~~lG~ll~aLAt~~~  474 (655)
T KOG3741|consen  414 LACKTLDLKKILV---TGKMRIRISGCGIMDVLQEDP------T-------EPLE---SQQQNDLRDLGLLLLALATGTE  474 (655)
T ss_pred             ceeecccHhHeEe---eCcceEEEecccceeeecCCC------C-------cchh---HHhhhhHHHHHHHHHHHhhccc
Confidence            9999999999999   555567777666554432211      0       1121   1235699999999999999854


Q ss_pred             C-CCCCCcHHH-HHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          243 P-FIAQSNRQK-QQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       243 p-f~~~~~~~~-~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      - +......+. ...|           -..+|.+++++|.-+...++.+ -++.+++.|
T Consensus       475 ns~~~d~~~~s~~~~I-----------~~~yS~D~rn~v~yl~s~~~~~-ksI~~llp~  521 (655)
T KOG3741|consen  475 NSNRTDSTQSSHLTRI-----------TTTYSTDLRNVVEYLESLNFRE-KSIQDLLPM  521 (655)
T ss_pred             ccccccchHHHHHHHh-----------hhhhhHHHHHHHHHHHhcCccc-ccHHHHHHH
Confidence            3 211111111 1111           1457889999999999988876 778888764

>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.35  E-value=2.1e-11  Score=105.96  Aligned_cols=137  Identities=20%  Similarity=0.329  Sum_probs=115.1

Q ss_pred             HHhhhccCCCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhh
Q 009980          350 LKNLLGSHDLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSS  428 (521)
Q Consensus       350 l~~l~~~~~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~  428 (521)
                      +++.+.+...++-.++..+.+-.+||.+.+| |...||+...+.+      ..-+.+|+.+|+|++|.|+..|+..++..
T Consensus        79 Lq~aLsn~~~~~Fs~~TcrlmI~mfd~~~~G~i~f~EF~~Lw~~i------~~Wr~vF~~~D~D~SG~I~~sEL~~Al~~  152 (221)
T KOG0037|consen   79 LQQALSNGTWSPFSIETCRLMISMFDRDNSGTIGFKEFKALWKYI------NQWRNVFRTYDRDRSGTIDSSELRQALTQ  152 (221)
T ss_pred             HHHHhhcCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHH------HHHHHHHHhcccCCCCcccHHHHHHHHHH
Confidence            3344333334444555667778889999999 9999999999876      46788999999999999999999999999


Q ss_pred             ccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcc--eeHHHHHHHH
Q 009980          429 LRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGK--VTFDEFRAAM  504 (521)
Q Consensus       429 ~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~--I~~~Ef~~~~  504 (521)
                      ++...+.+-...++++||..++|.|.+++|..++..+.            .+-++|+..|++.+|.  |+|++|..+.
T Consensus       153 ~Gy~Lspq~~~~lv~kyd~~~~g~i~FD~FI~ccv~L~------------~lt~~Fr~~D~~q~G~i~~~y~dfl~~t  218 (221)
T KOG0037|consen  153 LGYRLSPQFYNLLVRKYDRFGGGRIDFDDFIQCCVVLQ------------RLTEAFRRRDTAQQGSITISYDDFLQMT  218 (221)
T ss_pred             cCcCCCHHHHHHHHHHhccccCCceeHHHHHHHHHHHH------------HHHHHHHHhccccceeEEEeHHHHHHHh
Confidence            99999999999999999988899999999999887642            4678999999999996  6799998764

>PLN02964 phosphatidylserine decarboxylase

Probab=99.35  E-value=5.7e-12  Score=130.10  Aligned_cols=104  Identities=17%  Similarity=0.267  Sum_probs=95.4

Q ss_pred             CCCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcC-CCCCcch---HHHHHHHHcCCCCcceeHHHHHHHHhhccC
Q 009980          357 HDLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMN-MSSLVPL---APRIFDLFDNNRDGTVDMREILCGFSSLRK  431 (521)
Q Consensus       357 ~~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~-~~~~~~~---~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~  431 (521)
                      ..++.+|++++++.|+.+|+|++| +    +..+++.+| ..++..+   +.++|+.+|.|++|.|+++||+.++..++.
T Consensus       135 t~f~~kqi~elkeaF~lfD~dgdG~i----Lg~ilrslG~~~pte~e~~fi~~mf~~~D~DgdG~IdfdEFl~lL~~lg~  210 (644)
T PLN02964        135 FDFVTQEPESACESFDLLDPSSSNKV----VGSIFVSCSIEDPVETERSFARRILAIVDYDEDGQLSFSEFSDLIKAFGN  210 (644)
T ss_pred             hhccHHHHHHHHHHHHHHCCCCCCcC----HHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhcc
Confidence            557888999999999999999999 6    888999999 5777765   799999999999999999999999998877


Q ss_pred             CCcHHHHHHHhHhhccCCCcceeHHHHHHHHHh
Q 009980          432 SQGDDALRLCFQMYDIDRSGCITKEEVASMLRA  464 (521)
Q Consensus       432 ~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~  464 (521)
                      ..+++++..+|+.||.|++|+|+.+||..++..
T Consensus       211 ~~seEEL~eaFk~fDkDgdG~Is~dEL~~vL~~  243 (644)
T PLN02964        211 LVAANKKEELFKAADLNGDGVVTIDELAALLAL  243 (644)
T ss_pred             CCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence            778889999999999999999999999999987

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.29  E-value=6.2e-11  Score=101.74  Aligned_cols=140  Identities=19%  Similarity=0.243  Sum_probs=98.2

Q ss_pred             ccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHHh
Q 009980           16 DILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIV   95 (521)
Q Consensus        16 ~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~   95 (521)
                      ..+++|+-+.+|.+...    +.++++|.=.+.....                   +. -...+....-.+|..++.++.
T Consensus         2 ~~i~~GAEa~i~~~~~~----g~~av~K~Ri~K~YR~-------------------p~-LD~klrr~Rt~~Earil~~a~   57 (204)
T COG3642           2 DLIKQGAEAIIYLTDFL----GLPAVVKERIPKRYRH-------------------PE-LDEKLRRERTRREARILAKAR   57 (204)
T ss_pred             chhhCCcceeEEeeecc----CcceEEEeecCcccCC-------------------hH-HHHHHHHHHHHHHHHHHHHHH
Confidence            46889999999999553    4457777632221111                   00 012234455677999998883


Q ss_pred             hccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q 009980           96 ENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLF  175 (521)
Q Consensus        96 ~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~  175 (521)
                      .     -.|....=+..+++...|+|||++|..|.+.+...       ...+++.+=.-+.-||..||+|+||.++||++
T Consensus        58 ~-----~GV~~P~v~dvD~~~~~I~me~I~G~~lkd~l~~~-------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl  125 (204)
T COG3642          58 E-----AGVPVPIVYDVDPDNGLIVMEYIEGELLKDALEEA-------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIIL  125 (204)
T ss_pred             H-----cCCCCCeEEEEcCCCCEEEEEEeCChhHHHHHHhc-------chHHHHHHHHHHHHHHhcCeecCCCccceEEE
Confidence            3     34444444556677778999999998888888765       24566667777788999999999999999999


Q ss_pred             eeCCCCCCEEEeecCCCccC
Q 009980          176 LNDREDSPLKIMDFGLSSVE  195 (521)
Q Consensus       176 ~~~~~~~~~kl~Dfg~a~~~  195 (521)
                          .++.+.++|||++...
T Consensus       126 ----~~~~i~~IDfGLg~~s  141 (204)
T COG3642         126 ----SGGRIYFIDFGLGEFS  141 (204)
T ss_pred             ----eCCcEEEEECCccccc
Confidence                3344999999999754

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.28  E-value=6e-11  Score=101.22  Aligned_cols=153  Identities=24%  Similarity=0.312  Sum_probs=111.1

Q ss_pred             ecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHH
Q 009980           14 VTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRK   93 (521)
Q Consensus        14 ~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~   93 (521)
                      ....|-+|+-+.|+++..    .|+.+.||.=......           +        |. -...+......+|.+.+.+
T Consensus        11 ~l~likQGAEArv~~~~~----~Ge~~iIK~Rf~K~YR-----------H--------P~-LD~kLtr~Rt~~Ear~l~k   66 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSF----SGEAAIIKERFSKRYR-----------H--------PA-LDQKLTRKRTKQEARLLAK   66 (229)
T ss_pred             cceeeeccceeeEeeecc----CCceeEEeeccccccc-----------c--------hH-HHHHHHHHHHHHHHHHHHH
Confidence            467788999999999977    5677888863221111           0        01 1223455667889999999


Q ss_pred             HhhccCCCCCccceeEEEEeCCeEEEEEeccCC-CchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCC
Q 009980           94 IVENVSPHPNVIDLYDVYEDQNGVHLILELCSG-GELFDRIVAQE--RYMEVGAAAVIRQIAEGLAALHQANIVHRDLKP  170 (521)
Q Consensus        94 l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~g-g~L~~~l~~~~--~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp  170 (521)
                      +...     .|.-..=++.+...-.|+|||++| .++.+++....  .........++++|=..+.-||..+|+|+||..
T Consensus        67 ~~~~-----GI~~P~l~~~D~~~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTT  141 (229)
T KOG3087|consen   67 CRAL-----GIPAPRLIFIDTYGGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTT  141 (229)
T ss_pred             HHHh-----CCCCceEEEEecCCCeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccc
Confidence            8433     444334456677777899999988 46777776532  233334478899999999999999999999999


Q ss_pred             CcEEEeeCCCCCCEEEeecCCCccC
Q 009980          171 ENCLFLNDREDSPLKIMDFGLSSVE  195 (521)
Q Consensus       171 ~Nil~~~~~~~~~~kl~Dfg~a~~~  195 (521)
                      +||++..++....+.++|||++...
T Consensus       142 SNill~~~~~~~~~~lIdfgls~~s  166 (229)
T KOG3087|consen  142 SNILLRSDGNQITPILIDFGLSSVS  166 (229)
T ss_pred             cceEEecCCCcCceEEEeecchhcc
Confidence            9999987777777899999998654

>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.27  E-value=1.8e-11  Score=112.54  Aligned_cols=134  Identities=19%  Similarity=0.308  Sum_probs=104.0

Q ss_pred             HHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCC-CcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcH-----
Q 009980          363 EIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSS-LVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGD-----  435 (521)
Q Consensus       363 ~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~-~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~-----  435 (521)
                      .+.+-.+.|+.-|.|+|| ++++||..+|.--...- ..-.+.+.+..+|+|+||+|+++||+.-+.......++     
T Consensus       161 m~~rDe~rFk~AD~d~dg~lt~EEF~aFLHPEe~p~M~~iVi~Etl~d~Dkn~DG~I~~eEfigd~~~~~~~~~epeWv~  240 (325)
T KOG4223|consen  161 MIARDEERFKAADQDGDGSLTLEEFTAFLHPEEHPHMKDIVIAETLEDIDKNGDGKISLEEFIGDLYSHEGNEEEPEWVL  240 (325)
T ss_pred             HHHHHHHHHhhcccCCCCcccHHHHHhccChhhcchHHHHHHHHHHhhcccCCCCceeHHHHHhHHhhccCCCCCccccc
Confidence            445567889999999999 99999999986432211 12356788899999999999999999988764432211     


Q ss_pred             HHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHH
Q 009980          436 DALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRA  502 (521)
Q Consensus       436 ~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~  502 (521)
                      .+-.+.|...|+|+||+++.+|++.++......      ..+.+..-++-+.|.|+||++|++|...
T Consensus       241 ~Ere~F~~~~DknkDG~L~~dEl~~WI~P~~~d------~A~~EA~hL~~eaD~dkD~kLs~eEIl~  301 (325)
T KOG4223|consen  241 TEREQFFEFRDKNKDGKLDGDELLDWILPSEQD------HAKAEARHLLHEADEDKDGKLSKEEILE  301 (325)
T ss_pred             ccHHHHHHHhhcCCCCccCHHHHhcccCCCCcc------HHHHHHHHHhhhhccCccccccHHHHhh
Confidence            234467788899999999999999877543222      4556888999999999999999999876

>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.25  E-value=2.5e-11  Score=111.71  Aligned_cols=139  Identities=23%  Similarity=0.290  Sum_probs=109.0

Q ss_pred             HHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccC------CC--
Q 009980          363 EIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRK------SQ--  433 (521)
Q Consensus       363 ~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~------~~--  433 (521)
                      ...++..++.++|.++|| ++..|+..+...........+..+-+...|.|.||.|+|+|++..+.....      ..  
T Consensus        75 ~~~rl~~l~~~iD~~~Dgfv~~~El~~wi~~s~k~~v~~~~~~~~~~~d~~~Dg~i~~eey~~~~~~~~~~~~~~~d~e~  154 (325)
T KOG4223|consen   75 SQERLGKLVPKIDSDSDGFVTESELKAWIMQSQKKYVVEEAARRWDEYDKNKDGFITWEEYLPQTYGRVDLPDEFPDEED  154 (325)
T ss_pred             hHHHHHHHHhhhcCCCCCceeHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccceeeHHHhhhhhhhcccCccccccchh
Confidence            445688899999999999 999999999877654444567788889999999999999999998775311      00  


Q ss_pred             cH------HHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          434 GD------DALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       434 ~~------~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      .+      ..-+.-|+..|.|++|.+|.+||..++..-..     ..+.+-.+.+.+..+|+|+||+|+++||+.-|-.
T Consensus       155 ~~~~~km~~rDe~rFk~AD~d~dg~lt~EEF~aFLHPEe~-----p~M~~iVi~Etl~d~Dkn~DG~I~~eEfigd~~~  228 (325)
T KOG4223|consen  155 NEEYKKMIARDEERFKAADQDGDGSLTLEEFTAFLHPEEH-----PHMKDIVIAETLEDIDKNGDGKISLEEFIGDLYS  228 (325)
T ss_pred             cHHHHHHHHHHHHHHhhcccCCCCcccHHHHHhccChhhc-----chHHHHHHHHHHhhcccCCCCceeHHHHHhHHhh
Confidence            00      11345799999999999999999988853211     1244456788899999999999999999997766

>PLN02964 phosphatidylserine decarboxylase

Probab=99.19  E-value=6.3e-11  Score=122.46  Aligned_cols=97  Identities=27%  Similarity=0.374  Sum_probs=84.0

Q ss_pred             chHHHHHHHHcCCCCcceeHHHHHHHHhhcc-CCCcHHH---HHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCC
Q 009980          400 PLAPRIFDLFDNNRDGTVDMREILCGFSSLR-KSQGDDA---LRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDIT  475 (521)
Q Consensus       400 ~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~-~~~~~~~---l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~  475 (521)
                      +++.++|..+|+|++|.+    +..++..++ ..+++++   ++.+|+.+|.|++|.|+++||..++..++..      .
T Consensus       143 ~elkeaF~lfD~dgdG~i----Lg~ilrslG~~~pte~e~~fi~~mf~~~D~DgdG~IdfdEFl~lL~~lg~~------~  212 (644)
T PLN02964        143 ESACESFDLLDPSSSNKV----VGSIFVSCSIEDPVETERSFARRILAIVDYDEDGQLSFSEFSDLIKAFGNL------V  212 (644)
T ss_pred             HHHHHHHHHHCCCCCCcC----HHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhccC------C
Confidence            567889999999999997    556666677 4666665   8999999999999999999999999876543      4


Q ss_pred             ChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          476 EPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       476 ~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      +++++..+|+.+|+|+||+|+++||+++|..
T Consensus       213 seEEL~eaFk~fDkDgdG~Is~dEL~~vL~~  243 (644)
T PLN02964        213 AANKKEELFKAADLNGDGVVTIDELAALLAL  243 (644)
T ss_pred             CHHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence            6778999999999999999999999999887

>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E

Probab=99.18  E-value=9.5e-11  Score=85.85  Aligned_cols=66  Identities=36%  Similarity=0.612  Sum_probs=54.3

Q ss_pred             HHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHH
Q 009980          437 ALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAM  504 (521)
Q Consensus       437 ~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~  504 (521)
                      +++.+|+.+|.|++|+|+.+||..++..++....  ....++.++.+|+.+|+|+||.|+++||..+|
T Consensus         1 ~l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~--~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~   66 (66)
T PF13499_consen    1 RLKEAFKKFDKDGDGYISKEELRRALKHLGRDMS--DEESDEMIDQIFREFDTDGDGRISFDEFLNFM   66 (66)
T ss_dssp             HHHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHST--HHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred             CHHHHHHHHcCCccCCCCHHHHHHHHHHhccccc--HHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence            4789999999999999999999999998765311  01233467777999999999999999999876

...

>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13

Probab=99.14  E-value=1.2e-10  Score=89.35  Aligned_cols=65  Identities=25%  Similarity=0.406  Sum_probs=58.3

Q ss_pred             HHHHHHhHhhcc-CCCcceeHHHHHHHHHh-CCCCCCCCCCCCh-hHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          436 DALRLCFQMYDI-DRSGCITKEEVASMLRA-LPDDCLPVDITEP-GKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       436 ~~l~~~f~~~D~-d~~G~I~~~e~~~~l~~-~~~~~~~~~~~~~-~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      ..+..+|+.||+ +++|+|+.+||+.++.. ++..      +++ ++++.+++.+|.|+||.|+|+||..+|..
T Consensus         8 ~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~------ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~   75 (89)
T cd05022           8 ETLVSNFHKASVKGGKESLTASEFQELLTQQLPHL------LKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGE   75 (89)
T ss_pred             HHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhh------ccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence            358899999999 99999999999999998 7654      455 78999999999999999999999998875

S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=99.14  E-value=4e-10  Score=104.57  Aligned_cols=145  Identities=22%  Similarity=0.274  Sum_probs=103.7

Q ss_pred             ccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHHh
Q 009980           16 DILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIV   95 (521)
Q Consensus        16 ~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~   95 (521)
                      +.||.|..+.||++...   .+..+++|+.......                           .....+..|..+++.+.
T Consensus         4 ~~l~~G~~n~~~~v~~~---~g~~~ilK~~~~~~~~---------------------------~~~~~~~~E~~~~~~l~   53 (223)
T cd05154           4 RQLSGGQSNLTYLLTAG---GGRRLVLRRPPPGALL---------------------------PSAHDVAREYRVLRALA   53 (223)
T ss_pred             eecCCCccceEEEEEec---CCcceEEEeCCCcccC---------------------------cccccHHHHHHHHHHhh
Confidence            57899999999999874   3578999997542210                           01224788999998882


Q ss_pred             hccCCCCCccceeEEEEeC---CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH------------
Q 009980           96 ENVSPHPNVIDLYDVYEDQ---NGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ------------  160 (521)
Q Consensus        96 ~~~~~hpniv~~~~~~~~~---~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~------------  160 (521)
                      .   .+.++++++.+....   +..++||||++|.++.+.+.. ..+++.....++.+++.+|..||+            
T Consensus        54 ~---~~~~vp~~~~~~~~~~~~~~~~~v~e~i~G~~l~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~  129 (223)
T cd05154          54 G---TGVPVPKVLALCEDPSVLGTPFYVMERVDGRVLRDRLLR-PELSPEERRALARALADTLAALHSVDPAAVGLGDLG  129 (223)
T ss_pred             C---CCCCCCCEEEECCCCCccCCceEEEEEeCCEecCCCCCC-CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccC
Confidence            2   134567777776654   367899999999888765432 356777777778888888888773            


Q ss_pred             --------------------------------------------CCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccC
Q 009980          161 --------------------------------------------ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVE  195 (521)
Q Consensus       161 --------------------------------------------~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~  195 (521)
                                                                  ..++|+|++|.||++..+ ..+.+.|+||+.+...
T Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~-~~~~~~iID~e~~~~g  207 (223)
T cd05154         130 RPGGYLERQVARWRRQYDASRTDEPPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPD-EPRVVAVLDWELATLG  207 (223)
T ss_pred             CCCchHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCC-CCcEEEEEeccccccC
Confidence                                                        236899999999999321 1456899999988653

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]

Probab=99.11  E-value=7.9e-10  Score=90.15  Aligned_cols=112  Identities=21%  Similarity=0.296  Sum_probs=98.4

Q ss_pred             hHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHH
Q 009980          401 LAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKL  480 (521)
Q Consensus       401 ~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~  480 (521)
                      +.+++|..+|.|+||.|+-+++...+.+++...+++++..+++.    ..|-|++--|..++......     ..+++.+
T Consensus        33 EfKEAF~~mDqnrDG~IdkeDL~d~~aSlGk~~~d~elDaM~~E----a~gPINft~FLTmfGekL~g-----tdpe~~I  103 (171)
T KOG0031|consen   33 EFKEAFNLMDQNRDGFIDKEDLRDMLASLGKIASDEELDAMMKE----APGPINFTVFLTMFGEKLNG-----TDPEEVI  103 (171)
T ss_pred             HHHHHHHHHhccCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHh----CCCCeeHHHHHHHHHHHhcC-----CCHHHHH
Confidence            55678999999999999999999999999999999999998874    67999999999988753221     1457789


Q ss_pred             HHHHHHhcCCCCcceeHHHHHHHHhc-CccHHHHHHHhhhhC
Q 009980          481 DEIFDLMDANNDGKVTFDEFRAAMQR-DSSLQDVVLSSLRQQ  521 (521)
Q Consensus       481 ~~~f~~~D~~~dG~I~~~Ef~~~~~~-~~~~~~~~~~~~~~~  521 (521)
                      ..+|+.||.+++|+|.-+.+++++.+ +..+++++++.|+++
T Consensus       104 ~~AF~~FD~~~~G~I~~d~lre~Ltt~gDr~~~eEV~~m~r~  145 (171)
T KOG0031|consen  104 LNAFKTFDDEGSGKIDEDYLRELLTTMGDRFTDEEVDEMYRE  145 (171)
T ss_pred             HHHHHhcCccCCCccCHHHHHHHHHHhcccCCHHHHHHHHHh
Confidence            99999999999999999999999998 999999999998763

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.09  E-value=8.7e-11  Score=119.26  Aligned_cols=153  Identities=24%  Similarity=0.380  Sum_probs=113.6

Q ss_pred             HHHHHHHHHHHC-CCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC---------cc-cccCCccccccccccc
Q 009980          150 QIAEGLAALHQA-NIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---------VV-GLFGSIDYVSPEALLQ  218 (521)
Q Consensus       150 qil~al~~lH~~-~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---------~~-~~~gt~~y~aPE~~~~  218 (521)
                      ++..|+.|+|.. ++||++|.|++|.+   +.++..||+.|+++........         .. -..-...|.|||.+.+
T Consensus       107 ~v~dgl~flh~sAk~VH~ni~p~~i~~---na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~  183 (700)
T KOG2137|consen  107 NVADGLAFLHRSAKVVHGNIQPEAIVV---NANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG  183 (700)
T ss_pred             cccchhhhhccCcceeecccchhheee---ccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence            344899999966 89999999999999   8899999999998865433110         11 1124567999999998


Q ss_pred             CCCCchhhhHHHHHHHHHHH-hCCCCCCCCCcHHHHHHHHcCCCCCc-hhhhhccCHHHHHHHHHhccCCCCCCCCHHHH
Q 009980          219 DRITSKSDMWSLGVILYILL-SGYPPFIAQSNRQKQQMIMAGEFSFY-EQTWKNISSSAKQLISSLLTVDPNRRPSAQEL  296 (521)
Q Consensus       219 ~~~~~~~DiwslG~il~~ll-~g~~pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~  296 (521)
                      ...+.++|++|+|+++|.+. .|+.-+.+.+....... ........ ...-.++|+++++=+.++|..++.-||++..+
T Consensus       184 ~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~-~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~~~l  262 (700)
T KOG2137|consen  184 TTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSF-SRNLLNAGAFGYSNNLPSELRESLKKLLNGDSAVRPTLDLL  262 (700)
T ss_pred             ccccccccceeeeeEEEEEecCCcchhhccCCcchhhh-hhcccccccccccccCcHHHHHHHHHHhcCCcccCcchhhh
Confidence            77889999999999999998 56666655443322221 11111111 11125799999999999999999999999999


Q ss_pred             HcCCcccCCC
Q 009980          297 LNHPWVIGDS  306 (521)
Q Consensus       297 l~h~~~~~~~  306 (521)
                      +..|||....
T Consensus       263 ~~~~ff~D~~  272 (700)
T KOG2137|consen  263 LSIPFFSDPG  272 (700)
T ss_pred             hcccccCCch
Confidence            9999998654

>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]

Probab=99.06  E-value=7.6e-10  Score=97.06  Aligned_cols=100  Identities=23%  Similarity=0.287  Sum_probs=84.0

Q ss_pred             HHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhcc---C--------C
Q 009980          365 QNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLR---K--------S  432 (521)
Q Consensus       365 ~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~---~--------~  432 (521)
                      .-...+|+.+|.|++| |+..||..+|..+-....++.++-+|+.+|.|++|.|+++|++.++..+.   .        .
T Consensus        64 ~y~~~vF~~fD~~~dg~i~F~Efi~als~~~rGt~eekl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~~~~~  143 (193)
T KOG0044|consen   64 KYAELVFRTFDKNKDGTIDFLEFICALSLTSRGTLEEKLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALPEDEE  143 (193)
T ss_pred             HHHHHHHHHhcccCCCCcCHHHHHHHHHHHcCCcHHHHhhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCCcccc
Confidence            3456789999999999 99999988888776666677888899999999999999999998876632   1        1


Q ss_pred             CcHHHHHHHhHhhccCCCcceeHHHHHHHHHh
Q 009980          433 QGDDALRLCFQMYDIDRSGCITKEEVASMLRA  464 (521)
Q Consensus       433 ~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~  464 (521)
                      ..++.+..+|+.+|.|+||.||.+||......
T Consensus       144 ~~~~~v~~if~k~D~n~Dg~lT~eef~~~~~~  175 (193)
T KOG0044|consen  144 TPEERVDKIFSKMDKNKDGKLTLEEFIEGCKA  175 (193)
T ss_pred             cHHHHHHHHHHHcCCCCCCcccHHHHHHHhhh
Confidence            24567889999999999999999999987754

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=99.03  E-value=1e-08  Score=98.33  Aligned_cols=177  Identities=19%  Similarity=0.251  Sum_probs=123.2

Q ss_pred             eEEEEEeccCCCch-HHHHH---hcCC---CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEee
Q 009980          116 GVHLILELCSGGEL-FDRIV---AQER---YMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMD  188 (521)
Q Consensus       116 ~~~lv~e~~~gg~L-~~~l~---~~~~---~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~D  188 (521)
                      .+-+.|..+.|..= .++..   ++.+   .....+....+.++.|.+.||..|.+-+|+.++|+|+   ...+.|.|+|
T Consensus        84 ~iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lV---sd~~~V~LVd  160 (637)
T COG4248          84 VIGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLV---SDDSKVVLVD  160 (637)
T ss_pred             eeEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceee---ecCceEEEEc
Confidence            37789999988532 22221   2223   4456688888999999999999999999999999999   5667788888


Q ss_pred             cCCCccCCCCCCcccccCCcccccccccc-----cCCCCchhhhHHHHHHHHHHHhC-CCCCCCCCc-----HHHHHHHH
Q 009980          189 FGLSSVEGYTDPVVGLFGSIDYVSPEALL-----QDRITSKSDMWSLGVILYILLSG-YPPFIAQSN-----RQKQQMIM  257 (521)
Q Consensus       189 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslG~il~~ll~g-~~pf~~~~~-----~~~~~~i~  257 (521)
                      -..-..........-.+|.+.|.+||...     +-.-+...|.|.||+++++++.| ++||.+...     .-....|.
T Consensus       161 sDsfqi~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia  240 (637)
T COG4248         161 SDSFQINANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIA  240 (637)
T ss_pred             ccceeeccCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhh
Confidence            54332222222233346899999999765     23346688999999999999886 999965321     11112344


Q ss_pred             cCCCCC------------chhhhhccCHHHHHHHHHhccC--CCCCCCCHHH
Q 009980          258 AGEFSF------------YEQTWKNISSSAKQLISSLLTV--DPNRRPSAQE  295 (521)
Q Consensus       258 ~~~~~~------------~~~~~~~~s~~~~~li~~~l~~--dp~~R~t~~~  295 (521)
                      .+.+.+            ....|.-+++.+..+..+|+..  ++.-|||++.
T Consensus       241 ~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~a  292 (637)
T COG4248         241 HGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKA  292 (637)
T ss_pred             cceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHH
Confidence            443322            2234677899999999999864  4678999754

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=99.02  E-value=7.9e-10  Score=98.26  Aligned_cols=154  Identities=20%  Similarity=0.201  Sum_probs=84.0

Q ss_pred             EEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHHhhccCCCCCc
Q 009980           25 VVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNV  104 (521)
Q Consensus        25 ~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~hpni  104 (521)
                      .||.|...   .+..+|||+.+.....-.. ...-+.......... ..............+|.+.|.++...   --++
T Consensus         1 ~Vy~~~~~---~~~~~a~K~~r~~~~~Fk~-~~~y~~~~~r~~~~~-~~~~~~~~~~~~~~~E~~~L~~l~~~---Gv~v   72 (188)
T PF01163_consen    1 DVYHAIDP---DGEEVAVKIYRTGRTSFKR-RKKYRDYDYRFKKYR-HKSSWRYLIREWAKKEFRNLKRLYEA---GVPV   72 (188)
T ss_dssp             EEEEEEEC---TTEEEEEEEE-S---SS-H-HHHHTTTSTTSTTC---G--CHHHHHHHHHHHHHHHHHCCCT---T-SS
T ss_pred             CEEEEECC---CCCEEEEEEeccCceEEEE-eeeeecccchhcccc-cccCHHHHHHHHHHHHHHHHHHHHHC---CccC
Confidence            38999876   5779999998753221100 000000000000000 00112223445677899999998221   1246


Q ss_pred             cceeEEEEeCCeEEEEEeccC--CCchHHHHHhcCCCCHHHHHHHHHHHHHHHHH-HHHCCCeeccCCCCcEEEeeCCCC
Q 009980          105 IDLYDVYEDQNGVHLILELCS--GGELFDRIVAQERYMEVGAAAVIRQIAEGLAA-LHQANIVHRDLKPENCLFLNDRED  181 (521)
Q Consensus       105 v~~~~~~~~~~~~~lv~e~~~--gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~-lH~~~i~H~dlkp~Nil~~~~~~~  181 (521)
                      ++++++.  .  .+|||||+.  |..+.. +... .++......++.+++..+.. +|..||+|+||.+.||++   .. 
T Consensus        73 P~p~~~~--~--~~ivME~I~~~G~~~~~-l~~~-~~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv---~~-  142 (188)
T PF01163_consen   73 PKPYDYN--R--NVIVMEYIGEDGVPLPR-LKDV-DLSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILV---DD-  142 (188)
T ss_dssp             --EEEEE--T--TEEEEE--EETTEEGGC-HHHC-GGGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEE---ET-
T ss_pred             CcEEEEe--C--CEEEEEecCCCccchhh-HHhc-cccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEe---ec-
Confidence            6666542  2  369999998  655543 3321 22245667788888885555 579999999999999999   33 


Q ss_pred             CCEEEeecCCCccCC
Q 009980          182 SPLKIMDFGLSSVEG  196 (521)
Q Consensus       182 ~~~kl~Dfg~a~~~~  196 (521)
                      +.+.++|||.|....
T Consensus       143 ~~~~iIDf~qav~~~  157 (188)
T PF01163_consen  143 GKVYIIDFGQAVDSS  157 (188)
T ss_dssp             TCEEE--GTTEEETT
T ss_pred             ceEEEEecCcceecC
Confidence            389999999887543

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13

Probab=99.01  E-value=1.2e-09  Score=83.91  Aligned_cols=68  Identities=22%  Similarity=0.256  Sum_probs=59.5

Q ss_pred             HHHHHHHHHHHhhhc-CCCC-CCHHHHHHHHHh-cCCCCCc-chHHHHHHHHcCCCCcceeHHHHHHHHhhc
Q 009980          362 EEIQNLRIHFRTICA-NGDN-ATLSEFEEVLKA-MNMSSLV-PLAPRIFDLFDNNRDGTVDMREILCGFSSL  429 (521)
Q Consensus       362 ~~~~~l~~~F~~~D~-~~~g-i~~~el~~~l~~-~~~~~~~-~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~  429 (521)
                      ..+..+..+|+.||. +++| |+..||+.+++. +|...+. ++++++++.+|.|+||.|+|+||+.++..+
T Consensus         5 ~ai~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~l   76 (89)
T cd05022           5 KAIETLVSNFHKASVKGGKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGEL   76 (89)
T ss_pred             HHHHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence            456778999999999 8889 999999999998 8876666 789999999999999999999999887654

S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=99.01  E-value=1.6e-08  Score=95.56  Aligned_cols=108  Identities=19%  Similarity=0.114  Sum_probs=81.9

Q ss_pred             HHHHHHHHHHHhhccCCCCCccceeEEEEe-----CCeEEEEEeccCCC-chHHHHHh--cCCCCHHHHHHHHHHHHHHH
Q 009980           84 LTNEILVMRKIVENVSPHPNVIDLYDVYED-----QNGVHLILELCSGG-ELFDRIVA--QERYMEVGAAAVIRQIAEGL  155 (521)
Q Consensus        84 ~~~E~~~l~~l~~~~~~hpniv~~~~~~~~-----~~~~~lv~e~~~gg-~L~~~l~~--~~~~~~~~~~~i~~qil~al  155 (521)
                      ..+|...+.+|...--..|   .++.+++.     ....+||||+++|. +|.+++..  ....++.....++.++...+
T Consensus        75 a~rE~~~l~~L~~~GIptP---~pVa~~e~~~~~~~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i  151 (268)
T PRK15123         75 ADREWRAIHRLHEVGVDTM---TGVAFGERGSNPATRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMV  151 (268)
T ss_pred             HHHHHHHHHHHHHcCCCCC---CeeEEEEecCCCccceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHH
Confidence            6789999988854433334   33444433     23578999999886 78888753  34566778889999999999


Q ss_pred             HHHHHCCCeeccCCCCcEEEeeC----CCCCCEEEeecCCCcc
Q 009980          156 AALHQANIVHRDLKPENCLFLND----REDSPLKIMDFGLSSV  194 (521)
Q Consensus       156 ~~lH~~~i~H~dlkp~Nil~~~~----~~~~~~kl~Dfg~a~~  194 (521)
                      .-||..||+|+|++|.|||+..+    .....+.++||+.+..
T Consensus       152 ~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~  194 (268)
T PRK15123        152 RDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQI  194 (268)
T ss_pred             HHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCcccc
Confidence            99999999999999999999431    2356799999998753

>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B

Probab=99.00  E-value=1.5e-09  Score=83.63  Aligned_cols=65  Identities=25%  Similarity=0.427  Sum_probs=57.2

Q ss_pred             HHHHHHhHhhc-cCCCc-ceeHHHHHHHHHh-----CCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          436 DALRLCFQMYD-IDRSG-CITKEEVASMLRA-----LPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       436 ~~l~~~f~~~D-~d~~G-~I~~~e~~~~l~~-----~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      ..++.+|+.|| +|++| +|+.+||+.++..     ++..      .++++++.+++.+|.|+||.|+|+||..++..
T Consensus         8 ~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~------~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~~   79 (88)
T cd05027           8 VALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEI------KEQEVVDKVMETLDSDGDGECDFQEFMAFVAM   79 (88)
T ss_pred             HHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCC------CCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            35889999998 79999 6999999999998     6554      46678999999999999999999999998764

S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i

>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E

Probab=98.97  E-value=1.3e-09  Score=79.71  Aligned_cols=60  Identities=23%  Similarity=0.443  Sum_probs=32.4

Q ss_pred             HHHHHHHHcCCCCcceeHHHHHHHHhhccCCC----cHHHHHHHhHhhccCCCcceeHHHHHHH
Q 009980          402 APRIFDLFDNNRDGTVDMREILCGFSSLRKSQ----GDDALRLCFQMYDIDRSGCITKEEVASM  461 (521)
Q Consensus       402 ~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~----~~~~l~~~f~~~D~d~~G~I~~~e~~~~  461 (521)
                      ++++|+.+|.|++|.|+.+||..++..++...    ..+.+..+|+.+|.|++|.|+++||..+
T Consensus         2 l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~   65 (66)
T PF13499_consen    2 LKEAFKKFDKDGDGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNF   65 (66)
T ss_dssp             HHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHH
T ss_pred             HHHHHHHHcCCccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhcc
Confidence            34555555555555555555555555544322    2233444466666666666666666554

...

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=98.95  E-value=9.9e-09  Score=93.70  Aligned_cols=155  Identities=22%  Similarity=0.263  Sum_probs=106.5

Q ss_pred             eeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccc---cccHHHHHHHH
Q 009980           12 YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQV---SVSDALLTNEI   88 (521)
Q Consensus        12 Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~E~   88 (521)
                      +.++..||-|.-|.||.|.+.   .+.++|||.=+- +..+-.        -......+....++.   ..++...++|.
T Consensus        93 e~iG~~IGvGKEsdVY~~~~~---~g~~~~vKfHR~-GrtsFr--------kvk~~R~y~~~~~h~sWl~~sRl~A~rEf  160 (304)
T COG0478          93 EAIGTKIGVGKESDVYVAIDP---KGRKVAVKFHRL-GRTSFR--------KVKRNRDYLADKEHGSWLYVSRLAAEREF  160 (304)
T ss_pred             HhhccccccCccceEEEEECC---CCCEEEEEEeec-Cchhhh--------hhcchhhhhccccCcchhhhHHHHHHHHH
Confidence            456789999999999999987   588999997432 111100        001111222222222   24556678899


Q ss_pred             HHHHHHhhccCCC-CCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecc
Q 009980           89 LVMRKIVENVSPH-PNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRD  167 (521)
Q Consensus        89 ~~l~~l~~~~~~h-pniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~d  167 (521)
                      .+|.+|.    .+ -.+++.+++    +...+||||++|-.|...     ++....+..++..|+.-+.-+-..||+|+|
T Consensus       161 ~~L~~L~----~~G~~VP~P~~~----nRHaVvMe~ieG~eL~~~-----r~~~en~~~il~~il~~~~~~~~~GiVHGD  227 (304)
T COG0478         161 EALQRLY----PEGVKVPKPIAW----NRHAVVMEYIEGVELYRL-----RLDVENPDEILDKILEEVRKAYRRGIVHGD  227 (304)
T ss_pred             HHHHHhh----hcCCCCCCcccc----ccceeeeehcccceeecc-----cCcccCHHHHHHHHHHHHHHHHHcCccccC
Confidence            9999982    11 246666553    456799999999777532     224556667777777777777799999999


Q ss_pred             CCCCcEEEeeCCCCCCEEEeecCCCcc
Q 009980          168 LKPENCLFLNDREDSPLKIMDFGLSSV  194 (521)
Q Consensus       168 lkp~Nil~~~~~~~~~~kl~Dfg~a~~  194 (521)
                      +++-||++   +.++.+.++||-.+..
T Consensus       228 lSefNIlV---~~dg~~~vIDwPQ~v~  251 (304)
T COG0478         228 LSEFNILV---TEDGDIVVIDWPQAVP  251 (304)
T ss_pred             CchheEEE---ecCCCEEEEeCccccc
Confidence            99999999   7788899999976654

>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z

Probab=98.91  E-value=3.3e-09  Score=82.97  Aligned_cols=70  Identities=27%  Similarity=0.433  Sum_probs=55.5

Q ss_pred             HHHHHHhHhhc-cCCCc-ceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          436 DALRLCFQMYD-IDRSG-CITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       436 ~~l~~~f~~~D-~d~~G-~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      ..+..+|..|| +|++| +|+.+||+.++.......... ..++.+++.+++.+|.|+||.|+|+||..+|..
T Consensus        10 ~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~-~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~   81 (93)
T cd05026          10 DTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSS-QKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAA   81 (93)
T ss_pred             HHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhccc-ccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            35778899999 78998 599999999997632111111 135568999999999999999999999999875

S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.90  E-value=4e-08  Score=89.80  Aligned_cols=111  Identities=23%  Similarity=0.226  Sum_probs=86.6

Q ss_pred             HHHHHHHHHHHHHHhhccCCCCCccceeEEEEeC----CeEEEEEeccCCC-chHHHHHhcCCCCHHHHHHHHHHHHHHH
Q 009980           81 DALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQ----NGVHLILELCSGG-ELFDRIVAQERYMEVGAAAVIRQIAEGL  155 (521)
Q Consensus        81 ~~~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~----~~~~lv~e~~~gg-~L~~~l~~~~~~~~~~~~~i~~qil~al  155 (521)
                      .....+|...+.+|...--   .+++.+.+.+..    ...++|+|+++|. +|.+.+......+......++.++...+
T Consensus        55 ~~ra~~E~~~~~~L~~~Gi---~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i  131 (206)
T PF06293_consen   55 RSRAKREWRNLQRLREAGI---PTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLI  131 (206)
T ss_pred             chHHHHHHHHHHHHHHcCC---CCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHH
Confidence            3457789998888854322   345555555543    2468999999984 7888887755577888899999999999


Q ss_pred             HHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCcc
Q 009980          156 AALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV  194 (521)
Q Consensus       156 ~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~  194 (521)
                      .-||.+||+|+|++|.|||+..++....+.++||+-++.
T Consensus       132 ~~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~  170 (206)
T PF06293_consen  132 AKLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF  170 (206)
T ss_pred             HHHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence            999999999999999999995544445899999997765

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>PRK09902 hypothetical protein; Provisional

Probab=98.87  E-value=1.7e-07  Score=83.86  Aligned_cols=145  Identities=14%  Similarity=0.118  Sum_probs=102.0

Q ss_pred             ccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHHhhc
Q 009980           18 LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVEN   97 (521)
Q Consensus        18 lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~   97 (521)
                      -|+||.|.|+.....    |+.|-+|.....-..+..                      ...-+..+.+|+..+.+|...
T Consensus        26 ~~rgG~SgV~r~~~~----g~~~ylKrq~nhl~~s~r----------------------~P~g~ptf~rE~~~L~~L~~~   79 (216)
T PRK09902         26 YRRNGMSGVQCVERN----GKKLYVKRMTHHLFHSVR----------------------YPFGRPTIVREVAVIKELERA   79 (216)
T ss_pred             cCCCCcceEEEEEeC----CcEEEEEeccCccccccc----------------------CCCCchHHHHHHHHHHHHHHc
Confidence            467999999987663    446888886432222110                      012356799999999999654


Q ss_pred             cCCCCCccceeEEE--EeC--CeEEEEEeccCC-CchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCC
Q 009980           98 VSPHPNVIDLYDVY--EDQ--NGVHLILELCSG-GELFDRIVAQ--ERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKP  170 (521)
Q Consensus        98 ~~~hpniv~~~~~~--~~~--~~~~lv~e~~~g-g~L~~~l~~~--~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp  170 (521)
                      -..   ++++...-  ..+  -..+||+|-+.| .+|.+++...  .+.++.....++.++..++.-||..|+.|+|+-+
T Consensus        80 GvP---VP~pvf~~~~k~~~~~rA~LVTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~  156 (216)
T PRK09902         80 GVI---VPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYV  156 (216)
T ss_pred             CCC---CCccceeeeeccCCceEEEEEEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCH
Confidence            323   44444221  122  246799998865 5787777553  3457778889999999999999999999999999


Q ss_pred             CcEEEeeCCCCCC--EEEeecCCCcc
Q 009980          171 ENCLFLNDREDSP--LKIMDFGLSSV  194 (521)
Q Consensus       171 ~Nil~~~~~~~~~--~kl~Dfg~a~~  194 (521)
                      .||++   +..+.  +.++||.-++.
T Consensus       157 khIll---~~~g~~~v~lIDlEk~r~  179 (216)
T PRK09902        157 RHIYV---KTEGKAEAGFLDLEKSRR  179 (216)
T ss_pred             hheee---cCCCCeeEEEEEhhccch
Confidence            99999   33334  99999987654

>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]

Probab=98.86  E-value=1.6e-08  Score=95.96  Aligned_cols=109  Identities=23%  Similarity=0.371  Sum_probs=96.6

Q ss_pred             hHHHHHHHHcCCCCcceeHHHHHHHHhhccCC-CcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhH
Q 009980          401 LAPRIFDLFDNNRDGTVDMREILCGFSSLRKS-QGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGK  479 (521)
Q Consensus       401 ~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~-~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~  479 (521)
                      .++.+|+.+|.+++|.++..+....+..+... ...+-.+.+|+..|.|.||.++++||++.+..           .+.+
T Consensus        15 r~~~lf~~lD~~~~g~~d~~~l~k~~~~l~~~~~~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~~-----------~E~~   83 (463)
T KOG0036|consen   15 RIRCLFKELDSKNDGQVDLDQLEKGLEKLDHPKPNYEAAKMLFSAMDANRDGRVDYSEFKRYLDN-----------KELE   83 (463)
T ss_pred             HHHHHHHHhccCCCCceeHHHHHHHHHhcCCCCCchHHHHHHHHhcccCcCCcccHHHHHHHHHH-----------hHHH
Confidence            56789999999999999999999888876544 66778899999999999999999999999874           3457


Q ss_pred             HHHHHHHhcCCCCcceeHHHHHHHHhc-CccHHHHHHHhhhh
Q 009980          480 LDEIFDLMDANNDGKVTFDEFRAAMQR-DSSLQDVVLSSLRQ  520 (521)
Q Consensus       480 ~~~~f~~~D~~~dG~I~~~Ef~~~~~~-~~~~~~~~~~~~~~  520 (521)
                      +..+|..+|.|.||.|+.+|+.+.++. +-++++++.+.++.
T Consensus        84 l~~~F~~iD~~hdG~i~~~Ei~~~l~~~gi~l~de~~~k~~e  125 (463)
T KOG0036|consen   84 LYRIFQSIDLEHDGKIDPNEIWRYLKDLGIQLSDEKAAKFFE  125 (463)
T ss_pred             HHHHHhhhccccCCccCHHHHHHHHHHhCCccCHHHHHHHHH
Confidence            889999999999999999999999999 88899998877653

>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10

Probab=98.85  E-value=9.2e-09  Score=80.92  Aligned_cols=71  Identities=30%  Similarity=0.498  Sum_probs=56.9

Q ss_pred             HHHHHHhHhhcc-CC-CcceeHHHHHHHHHh-CCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhcCc
Q 009980          436 DALRLCFQMYDI-DR-SGCITKEEVASMLRA-LPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDS  508 (521)
Q Consensus       436 ~~l~~~f~~~D~-d~-~G~I~~~e~~~~l~~-~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~~~  508 (521)
                      ..++.+|+.||. |+ +|+|+.+||..++.. .+.. ... ..++++++.+++.+|.|++|.|+|+||..+|....
T Consensus         8 ~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~-lg~-~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~~~   81 (94)
T cd05031           8 ESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEF-LKN-QKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVAGLS   81 (94)
T ss_pred             HHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHH-hhc-cccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHH
Confidence            468899999997 97 799999999999875 2210 000 14567899999999999999999999999987633

S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.

>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B

Probab=98.84  E-value=1.2e-08  Score=78.60  Aligned_cols=67  Identities=18%  Similarity=0.335  Sum_probs=51.8

Q ss_pred             HHHHHHHHHHHhhh-cCCCC--CCHHHHHHHHHh-----cCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhh
Q 009980          362 EEIQNLRIHFRTIC-ANGDN--ATLSEFEEVLKA-----MNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSS  428 (521)
Q Consensus       362 ~~~~~l~~~F~~~D-~~~~g--i~~~el~~~l~~-----~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~  428 (521)
                      .-+..+.++|+.|| .+|+|  |+.+||+.+|+.     +|...+.+++.++++.+|.|++|.|+|+||+.++..
T Consensus         5 ~~~~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~~   79 (88)
T cd05027           5 KAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAM   79 (88)
T ss_pred             HHHHHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            34566788888887 67777  788888888887     677777777888888888888888888888777654

S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i

>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6

Probab=98.83  E-value=1.4e-08  Score=78.24  Aligned_cols=64  Identities=17%  Similarity=0.398  Sum_probs=55.7

Q ss_pred             HHHHHhHhhcc-CC-CcceeHHHHHHHHHh---CCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          437 ALRLCFQMYDI-DR-SGCITKEEVASMLRA---LPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       437 ~l~~~f~~~D~-d~-~G~I~~~e~~~~l~~---~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      .+-.+|..||. |+ +|+|+.+||+.++..   ++.+      .++++++++|+.+|.|+||.|+|+||..+|..
T Consensus        11 ~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k------~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~   79 (88)
T cd05029          11 LLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSK------LQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGA   79 (88)
T ss_pred             HHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCC------CCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHH
Confidence            46788999998 67 899999999999963   4544      57789999999999999999999999998865

S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact

>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]

Probab=98.83  E-value=2.8e-08  Score=94.70  Aligned_cols=138  Identities=22%  Similarity=0.341  Sum_probs=101.3

Q ss_pred             HHHHHHHHhhhcCCCC-CCHHHHHHHHHhc-CCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhcc------CC----
Q 009980          365 QNLRIHFRTICANGDN-ATLSEFEEVLKAM-NMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLR------KS----  432 (521)
Q Consensus       365 ~~l~~~F~~~D~~~~g-i~~~el~~~l~~~-~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~------~~----  432 (521)
                      .+|.+.|+.+|..+.| |+...+..++... |.+..-..+..  +....+.||.+.|.+-+..+..-.      ..    
T Consensus       464 sdL~~eF~~~D~~ksG~lsis~Wa~~mE~i~~L~LPWr~L~~--kla~~s~d~~v~Y~~~~~~l~~e~~~~ea~~slvet  541 (631)
T KOG0377|consen  464 SDLEDEFRKYDPKKSGKLSISHWAKCMENITGLNLPWRLLRP--KLANGSDDGKVEYKSTLDNLDTEVILEEAGSSLVET  541 (631)
T ss_pred             hHHHHHHHhcChhhcCeeeHHHHHHHHHHHhcCCCcHHHhhh--hccCCCcCcceehHhHHHHhhhhhHHHHHHhHHHHH
Confidence            5678899999999999 9999999988874 44433222222  223456678888887666543211      00    


Q ss_pred             --CcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          433 --QGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       433 --~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                        .....+..+|+.+|.|++|.||.+||+.++.-++... +. ..+++++.++-+.+|.|+||+|++.||.++++-
T Consensus       542 LYr~ks~LetiF~~iD~D~SG~isldEF~~a~~l~~sh~-~~-~i~~~~i~~la~~mD~NkDG~IDlNEfLeAFrl  615 (631)
T KOG0377|consen  542 LYRNKSSLETIFNIIDADNSGEISLDEFRTAWKLLSSHM-NG-AISDDEILELARSMDLNKDGKIDLNEFLEAFRL  615 (631)
T ss_pred             HHhchhhHHHHHHHhccCCCCceeHHHHHHHHHHHHhhc-CC-CcCHHHHHHHHHhhccCCCCcccHHHHHHHHhh
Confidence              1234578899999999999999999999887654321 11 256678999999999999999999999999875

>smart00027 EH Eps15 homology domain

Probab=98.82  E-value=1.4e-08  Score=80.32  Aligned_cols=68  Identities=22%  Similarity=0.302  Sum_probs=58.3

Q ss_pred             CCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhh
Q 009980          359 LNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSS  428 (521)
Q Consensus       359 ~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~  428 (521)
                      ++++++..++.+|..+|.+++| |+.+|+..+++..+  .+.+++.++|+.+|.+++|.|+|+||+.++..
T Consensus         4 ls~~~~~~l~~~F~~~D~d~~G~Is~~el~~~l~~~~--~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~   72 (96)
T smart00027        4 ISPEDKAKYEQIFRSLDKNQDGTVTGAQAKPILLKSG--LPQTLLAKIWNLADIDNDGELDKDEFALAMHL   72 (96)
T ss_pred             CCHHHHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            5778888999999999999999 99999999998865  35678889999999999999999999887754

Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.

>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1

Probab=98.80  E-value=2.1e-08  Score=78.56  Aligned_cols=70  Identities=26%  Similarity=0.419  Sum_probs=57.0

Q ss_pred             HHHHHHHhHhhc-cCCCc-ceeHHHHHHHHHh-CCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          435 DDALRLCFQMYD-IDRSG-CITKEEVASMLRA-LPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       435 ~~~l~~~f~~~D-~d~~G-~I~~~e~~~~l~~-~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      .+.++.+|+.|| +|++| .|+.+||+.++.. ++.. ... ..++++++.+|+.+|.|++|.|+|+||..++..
T Consensus         8 ~~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~-~~~-~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~   80 (92)
T cd05025           8 METLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDF-LDA-QKDADAVDKIMKELDENGDGEVDFQEFVVLVAA   80 (92)
T ss_pred             HHHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHH-ccC-CCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence            356899999997 99999 5999999999975 4321 000 135678999999999999999999999998875

S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=98.79  E-value=5.5e-10  Score=112.22  Aligned_cols=242  Identities=19%  Similarity=0.228  Sum_probs=166.8

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      .-|.....+++|+++++++++...  +. ....+++...                                 -...-+++
T Consensus       242 kws~~fh~fvK~altknpKkRpta--ek-lL~h~fvs~~---------------------------------l~~rl~~e  285 (829)
T KOG0576|consen  242 KWSEFFHNFVKGALTKNPKKRPTA--EK-LLQHPFVSQT---------------------------------LSRRLAIE  285 (829)
T ss_pred             cchHHHHHHHHHHhcCCCccCCCh--hh-heeceeeccc---------------------------------hhhHHHHH
Confidence            345556678999999999887764  32 2335554211                                 12455788


Q ss_pred             HHHHHhhccCCCCC-ccceeEEEEeCCeEEEEEeccCCC-chHH-HHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 009980           90 VMRKIVENVSPHPN-VIDLYDVYEDQNGVHLILELCSGG-ELFD-RIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHR  166 (521)
Q Consensus        90 ~l~~l~~~~~~hpn-iv~~~~~~~~~~~~~lv~e~~~gg-~L~~-~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~  166 (521)
                      +|.++     +||| .+..++-++.+...+++|+++.++ +-.. .-...-.+-+-+...+.+.-..+++++|+.-=+|+
T Consensus       286 LLdK~-----n~P~~~v~~~~d~~~E~~~~i~~~i~s~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~  360 (829)
T KOG0576|consen  286 LLDKV-----NNPNPVVRYLEDYDGEDYLWIPMRICSTGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSSYKVHR  360 (829)
T ss_pred             HHHHc-----cCCCCcccccccCCcccccchhhhhhcCCccccccCChhhHhhhhhhhhhhhhhhcccccccccccccCc
Confidence            88888     9999 777777777888999999999887 2211 11111224445566677778889999999877888


Q ss_pred             cCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCC
Q 009980          167 DLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIA  246 (521)
Q Consensus       167 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~  246 (521)
                      |    ||+.    ..+..+..||+.+.............+|+.++|||+...+.+....|.|++|+-..++.-|-+|-..
T Consensus       361 d----~~l~----s~~~~~~~~~~v~~~L~~~~~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~~  432 (829)
T KOG0576|consen  361 D----NILG----SEEEVKLLDFAVPPQLTRTMKPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRSS  432 (829)
T ss_pred             c----cccc----cccccccccccCCcccCcccccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCCC
Confidence            8    8876    4577899999998776655555667899999999999999999999999999877778778777543


Q ss_pred             CCcHHHHHHHHcCC--CCCch-hhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccC
Q 009980          247 QSNRQKQQMIMAGE--FSFYE-QTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIG  304 (521)
Q Consensus       247 ~~~~~~~~~i~~~~--~~~~~-~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~  304 (521)
                      ...  ....+-.+.  ..... ..|....  -.++...|+...|..|++...++.|.+|.+
T Consensus       433 P~~--~~~~~g~~p~s~~L~~~~aw~~~~--~~~~~~~~~~g~P~~pkv~mgacfsKvfng  489 (829)
T KOG0576|consen  433 PPA--VLPMIGNGPNSPMLTDKSAWSPVF--HRDFPAPCLNGLPPTPKVHMGACFSKVFNG  489 (829)
T ss_pred             Ccc--ccCCCCCCCCccccchhhhcCccc--ccCCcccccCCCCCCCcchhhHHHHHHhcc
Confidence            111  110010000  00111 1222111  125788899999999999999998887764

>smart00027 EH Eps15 homology domain

Probab=98.75  E-value=3.6e-08  Score=77.95  Aligned_cols=63  Identities=27%  Similarity=0.405  Sum_probs=56.2

Q ss_pred             HHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          436 DALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       436 ~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      ..++.+|+.+|.|++|.|+.+|+..++...+        .+++++..+|+.+|.+++|.|+|+||..+|..
T Consensus        10 ~~l~~~F~~~D~d~~G~Is~~el~~~l~~~~--------~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~   72 (96)
T smart00027       10 AKYEQIFRSLDKNQDGTVTGAQAKPILLKSG--------LPQTLLAKIWNLADIDNDGELDKDEFALAMHL   72 (96)
T ss_pred             HHHHHHHHHhCCCCCCeEeHHHHHHHHHHcC--------CCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            5688999999999999999999999998753        35668999999999999999999999997754

Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.

>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6

Probab=98.75  E-value=3.7e-08  Score=75.84  Aligned_cols=69  Identities=19%  Similarity=0.327  Sum_probs=58.7

Q ss_pred             HHHHHHHHHHHHhhhc-CC-CC-CCHHHHHHHHHh---cCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhc
Q 009980          361 EEEIQNLRIHFRTICA-NG-DN-ATLSEFEEVLKA---MNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSL  429 (521)
Q Consensus       361 ~~~~~~l~~~F~~~D~-~~-~g-i~~~el~~~l~~---~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~  429 (521)
                      ++.+..+-.+|.+||. || +| |+.+||+.++..   +|...+.+++.++++.+|.|++|.|+|+||+..+..+
T Consensus         6 e~~~~~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~l   80 (88)
T cd05029           6 DQAIGLLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGAL   80 (88)
T ss_pred             HHHHHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHH
Confidence            4556778899999998 67 67 999999999963   6888888899999999999999999999999877653

S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact

>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction

Probab=98.75  E-value=3e-08  Score=72.73  Aligned_cols=60  Identities=32%  Similarity=0.459  Sum_probs=53.4

Q ss_pred             HHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          439 RLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       439 ~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      +.+|+.+|.|++|.|+.+|+..++...+        .+++++..+|+.+|.+++|.|+|+||..++..
T Consensus         2 ~~~F~~~D~~~~G~i~~~el~~~l~~~g--------~~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~   61 (67)
T cd00052           2 DQIFRSLDPDGDGLISGDEARPFLGKSG--------LPRSVLAQIWDLADTDKDGKLDKEEFAIAMHL   61 (67)
T ss_pred             hHHHHHhCCCCCCcCcHHHHHHHHHHcC--------CCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence            4689999999999999999999998754        25568999999999999999999999998764

The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.

>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z

Probab=98.74  E-value=3.8e-08  Score=76.99  Aligned_cols=68  Identities=24%  Similarity=0.379  Sum_probs=51.9

Q ss_pred             HHHHHHHHHHHhhh-cCCCC--CCHHHHHHHHHh-c----CCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhc
Q 009980          362 EEIQNLRIHFRTIC-ANGDN--ATLSEFEEVLKA-M----NMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSL  429 (521)
Q Consensus       362 ~~~~~l~~~F~~~D-~~~~g--i~~~el~~~l~~-~----~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~  429 (521)
                      .-+..+.++|..|| .||+|  |+.+||+.+++. +    ....+..++.++++.+|.|+||.|+|+||+.++..+
T Consensus         7 ~a~~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l   82 (93)
T cd05026           7 GAMDTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAAL   82 (93)
T ss_pred             HHHHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence            44567788899998 67775  899999888866 2    223345578888888898888999999988877654

S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac

>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11

Probab=98.74  E-value=2.8e-08  Score=76.61  Aligned_cols=70  Identities=26%  Similarity=0.422  Sum_probs=55.7

Q ss_pred             HHHHHHhHh-hccCCCc-ceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          436 DALRLCFQM-YDIDRSG-CITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       436 ~~l~~~f~~-~D~d~~G-~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      ..+..+|+. +|++++| +|+.+||+.++....+.... ....+.+++.+++.+|.|+||.|+|+||..+|..
T Consensus         9 ~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~-~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~   80 (89)
T cd05023           9 ESLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTK-NQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGG   80 (89)
T ss_pred             HHHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhc-CCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHH
Confidence            357889999 7888876 99999999999875321111 1134568999999999999999999999998865

S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S

>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10

Probab=98.73  E-value=3.6e-08  Score=77.54  Aligned_cols=67  Identities=21%  Similarity=0.403  Sum_probs=55.0

Q ss_pred             HHHHHHHHHHhhhc-CC-CC-CCHHHHHHHHHh-----cCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhc
Q 009980          363 EIQNLRIHFRTICA-NG-DN-ATLSEFEEVLKA-----MNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSL  429 (521)
Q Consensus       363 ~~~~l~~~F~~~D~-~~-~g-i~~~el~~~l~~-----~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~  429 (521)
                      .+..+..+|..+|. |+ +| |+.+||..+|+.     +|...+.+++..+++.+|.|++|.|+|+||+.++...
T Consensus         6 ~~~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~~   80 (94)
T cd05031           6 AMESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVAGL   80 (94)
T ss_pred             HHHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            34668888999987 87 58 999999998886     4556677888999999999999999999998877654

S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.

>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP)

Probab=98.70  E-value=4e-08  Score=79.41  Aligned_cols=63  Identities=21%  Similarity=0.388  Sum_probs=54.0

Q ss_pred             cHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          434 GDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       434 ~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      ....+..+|..+|.|+||+|+.+|+..+.  +.        ..+..+..+|..+|.|+||.||++||..++..
T Consensus        46 ~~~~l~w~F~~lD~d~DG~Ls~~EL~~~~--l~--------~~e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl~~  108 (116)
T cd00252          46 CKDPVGWMFNQLDGNYDGKLSHHELAPIR--LD--------PNEHCIKPFFESCDLDKDGSISLDEWCYCFIK  108 (116)
T ss_pred             HHHHHHHHHHHHCCCCCCcCCHHHHHHHH--cc--------chHHHHHHHHHHHCCCCCCCCCHHHHHHHHhC
Confidence            34678999999999999999999999876  22        23457889999999999999999999999844

SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	521
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		4e-62
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		5e-61
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		2e-56
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		3e-56
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		9e-56
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		1e-55
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		1e-55
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		1e-55
3soa_A	444	Full-Length Human Camkii Length = 444		7e-55
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		8e-55
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		4e-54
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		6e-54
2w4o_A	349	Crystal Structure Of Human Camk4 In Complex With 4-		1e-53
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		3e-53
2vz6_A	313	Structure Of Human Calcium Calmodulin Dependent Pro		3e-53
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		1e-52
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		2e-52
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		2e-52
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		8e-52
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		8e-52
2jam_B	304	Crystal Structure Of Human Calmodulin-Dependent Pro		2e-51
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		4e-51
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		1e-49
3kk8_A	284	Camkii Substrate Complex A Length = 284		2e-47
3kk9_A	282	Camkii Substrate Complex B Length = 282		2e-47
3kl8_A	269	Camkiintide Inhibitor Complex Length = 269		2e-47
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		7e-46
3f3z_A	277	Crystal Structure Of Cryptosporidium Parvum Calcium		1e-45
2qg5_A	294	Cryptosporidium Parvum Calcium Dependent Protein Ki		1e-45
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		3e-45
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		7e-45
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		8e-44
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		1e-43
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		1e-43
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		1e-43
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		1e-43
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		2e-43
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		2e-43
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		2e-43
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		2e-43
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		2e-43
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		2e-43
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		3e-43
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		3e-43
3bhy_A	283	Crystal Structure Of Human Death Associated Protein		3e-43
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		5e-43
1yrp_A	278	Catalytic Domain Of Human Zip Kinase Phosphorylated		5e-43
2j90_A	304	Crystal Structure Of Human Zip Kinase In Complex Wi		9e-43
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		1e-42
2ya9_A	361	Crystal Structure Of The Autoinhibited Form Of Mous		2e-42
2a27_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		1e-41
1z9x_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		2e-41
1wmk_A	321	Human Death-Associated Kinase Drp-1, Mutant S308d D		5e-41
2a2a_A	321	High-resolution Crystallographic Analysis Of The Au		8e-41
3c0g_A	351	Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len		8e-41
3tac_A	361	Crystal Structure Of The Liprin-AlphaCASK COMPLEX L		9e-41
3kn5_A	325	Crystal Structure Of The C-Terminal Kinase Domain O		9e-41
1zws_A	288	Crystal Structure Of The Catalytic Domain Of Human		2e-40
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		4e-40
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		7e-40
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		2e-39
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		4e-39
2ycf_A	322	Crystal Structure Of Checkpoint Kinase 2 In Complex		5e-39
2ycr_A	323	Crystal Structure Of Checkpoint Kinase 2 In Complex		5e-39
2w0j_A	323	Crystal Structure Of Chk2 In Complex With Nsc 10955		5e-39
2xk9_A	322	Structural Analysis Of Checkpoint Kinase 2 (Chk2) I		6e-39
2cn5_A	329	Crystal Structure Of Human Chk2 In Complex With Adp		6e-39
3lm0_A	327	Crystal Structure Of Human SerineTHREONINE KINASE 1		7e-39
1kob_A	387	Twitchin Kinase Fragment (Aplysia), Autoregulated P		1e-38
3i6w_A	443	Structure And Activation Mechanism Of The Chk2 Dna-		2e-38
3i6u_A	419	Structure And Activation Mechanism Of The Chk2 Dna-		2e-38
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		6e-38
2qr8_A	342	2.0a X-ray Structure Of C-terminal Kinase Domain Of		1e-37
2wnt_A	330	Crystal Structure Of The Human Ribosomal Protein S6		3e-37
3rny_A	346	Crystal Structure Of Human Rsk1 C-Terminal Kinase D		3e-37
2qr7_A	342	2.0a X-Ray Structure Of C-Terminal Kinase Domain Of		9e-37
3r1n_A	317	Mk3 Kinase Bound To Compound 5b Length = 317		3e-36
3ka0_A	320	Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4		3e-36
3fhr_A	336	High Resolution Crystal Structure Of Mitogen-Activa		4e-36
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		4e-36
1kwp_A	400	Crystal Structure Of Mapkap2 Length = 400		5e-36
2onl_C	406	Crystal Structure Of The P38a-Mapkap Kinase 2 Heter		5e-36
2oza_A	356	Structure Of P38alpha Complex Length = 356		5e-36
3r2y_A	319	Mk2 Kinase Bound To Compound 1 Length = 319		6e-36
2p3g_X	327	Crystal Structure Of A Pyrrolopyridine Inhibitor Bo		6e-36
3fpm_A	325	Crystal Structure Of A Squarate Inhibitor Bound To		6e-36
2pzy_A	324	Structure Of Mk2 Complexed With Compound 76 Length		6e-36
3r2b_A	318	Mk2 Kinase Bound To Compound 5b Length = 318		6e-36
3gok_A	334	Binding Site Mapping Of Protein Ligands Length = 33		6e-36
2jbo_A	326	Protein Kinase Mk2 In Complex With An Inhibitor (Cr		7e-36
1tki_A	321	Autoinhibited Serine Kinase Domain Of The Giant Mus		8e-36
1koa_A	491	Twitchin Kinase Fragment (C.Elegans), Autoregulated		1e-35
3uto_A	573	Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-		2e-35
2hw6_A	307	Crystal Structure Of Mnk1 Catalytic Domain Length =		3e-35
2y7j_A	365	Structure Of Human Phosphorylase Kinase, Gamma 2 Le		3e-35
1nxk_A	400	Crystal Structure Of Staurosporine Bound To Map Kap		1e-33
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		2e-33
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		3e-33
2ac5_A	316	Structure Of Human Mnk2 Kinase Domain Mutant D228g		1e-32
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		1e-32
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		2e-32
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		2e-32
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		2e-32
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		2e-32
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		2e-32
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		2e-32
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		2e-32
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		3e-32
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		3e-32
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		3e-32
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		3e-32
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		3e-32
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		3e-32
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		3e-32
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		3e-32
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		4e-32
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		4e-32
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		4e-32
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		5e-32
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		5e-32
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		6e-32
2ac3_A	316	Structure Of Human Mnk2 Kinase Domain Length = 316		8e-32
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		8e-32
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		8e-32
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		8e-32
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		9e-32
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		1e-31
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		1e-31
3kga_A	299	Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexe		4e-31
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		1e-30
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		3e-30
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		4e-30
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		4e-30
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		4e-30
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		5e-30
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		5e-30
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		3e-29
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		4e-29
1y8g_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		4e-29
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		5e-29
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		6e-28
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		6e-28
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		7e-28
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		3e-27
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		4e-26
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		4e-26
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		8e-26
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		9e-26
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		9e-26
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		9e-26
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		9e-26
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		1e-25
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		1e-25
3uc4_A	362	The Crystal Structure Of Snf1-Related Kinase 2.6 Le		1e-25
3udb_A	317	Crystal Structure Of Snrk2.6 Length = 317		1e-25
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		1e-25
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		1e-25
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		2e-25
3ujg_A	361	Crystal Structure Of Snrk2.6 In Complex With Hab1 L		2e-25
4af3_A	292	Human Aurora B Kinase In Complex With Incenp And Vx		8e-25
3uc3_A	361	The Crystal Structure Of Snf1-Related Kinase 2.3 Le		1e-24
3hko_A	345	Crystal Structure Of A Cdpk Kinase Domain From Cryp		1e-24
3zut_A	362	The Structure Of Ost1 (D160a) Kinase Length = 362		1e-24
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		2e-24
3zuu_A	362	The Structure Of Ost1 (D160a, S175d) Kinase In Comp		2e-24
4ft3_A	279	Crystal Structure Of The Chk1 Length = 279		2e-24
4fsu_A	279	Crystal Structure Of The Chk1 Length = 279		3e-24
4fsn_A	278	Crystal Structure Of The Chk1 Length = 278		3e-24
4fsm_A	279	Crystal Structure Of The Chk1 Length = 279		3e-24
4fsw_A	279	Crystal Structure Of The Chk1 Length = 279		3e-24
2x8e_A	276	Discovery Of A Novel Class Of Triazolones As Checkp		3e-24
2br1_A	297	Structure-Based Design Of Novel Chk1 Inhibitors: In		4e-24
1ia8_A	289	The 1.7 A Crystal Structure Of Human Cell Cycle Che		4e-24
1zlt_A	295	Crystal Structure Of Chk1 Complexed With A Hymenald		4e-24
4fsy_A	279	Crystal Structure Of The Chk1 Length = 279		4e-24
4fsz_A	279	Crystal Structure Of The Chk1 Length = 279		4e-24
3ot3_A	273	X-Ray Crystal Structure Of Compound 22k Bound To Hu		4e-24
2r0u_A	323	Crystal Structure Of Chek1 In Complex With Inhibito		4e-24
2hog_A	322	Crystal Structure Of Chek1 In Complex With Inhibito		4e-24
2ydj_A	276	Discovery Of Checkpoint Kinase Inhibitor Azd7762 By		4e-24
3jvr_A	271	Characterization Of The Chk1 Allosteric Inhibitor B		4e-24
1zys_A	273	Co-Crystal Structure Of Checkpoint Kinase Chk1 With		4e-24
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		5e-24
4fst_A	269	Crystal Structure Of The Chk1 Length = 269		5e-24
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		5e-24
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		5e-24
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		5e-24
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		6e-24
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		7e-24
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		8e-24
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		3e-23
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		3e-23
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		4e-23
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		5e-23
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		5e-23
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		5e-23
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		5e-23
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		5e-23
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		5e-23
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		6e-23
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		6e-23
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		6e-23
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		6e-23
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		6e-23
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		6e-23
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		6e-23
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		7e-23
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		7e-23
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		7e-23
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		7e-23
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		7e-23
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		7e-23
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		7e-23
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		7e-23
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		7e-23
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		7e-23
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		8e-23
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		8e-23
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		8e-23
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		8e-23
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		9e-23
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		9e-23
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		9e-23
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		9e-23
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		9e-23
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		9e-23
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		1e-22
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		1e-22
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		1e-22
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		1e-22
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		1e-22
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		1e-22
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		1e-22
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		1e-22
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		1e-22
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		1e-22
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		1e-22
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		1e-22
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		1e-22
4ae9_A	343	Structure And Function Of The Human Sperm-specific		1e-22
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		1e-22
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		1e-22
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		1e-22
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		1e-22
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		1e-22
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		1e-22
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		1e-22
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		1e-22
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		1e-22
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		1e-22
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		1e-22
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		1e-22
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		1e-22
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		1e-22
4ae6_A	343	Structure And Function Of The Human Sperm-specific		2e-22
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		2e-22
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		2e-22
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		2e-22
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		2e-22
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		2e-22
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		2e-22
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		3e-22
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		3e-22
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		5e-22
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		6e-22
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		6e-22
2j2i_B	312	Crystal Structure Of The Humab Pim1 In Complex With		7e-22
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		7e-22
3jpv_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		7e-22
3cxw_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		7e-22
2bil_B	313	The Human Protein Kinase Pim1 In Complex With Its C		7e-22
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		8e-22
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		8e-22
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		9e-22
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		1e-21
4alv_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		1e-21
1xws_A	313	Crystal Structure Of The Human Pim1 Kinase Domain L		1e-21
1xqz_A	300	Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolut		1e-21
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		1e-21
2xj0_A	301	Protein Kinase Pim-1 In Complex With Fragment-4 Fro		1e-21
3a99_A	320	Structure Of Pim-1 Kinase Crystallized In The Prese		1e-21
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		2e-21
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		2e-21
3g51_A	325	Structural Diversity Of The Active Conformation Of		2e-21
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		2e-21
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		2e-21
3ma3_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		2e-21
2bik_B	313	Human Pim1 Phosphorylated On Ser261 Length = 313		2e-21
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		2e-21
3cy3_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		2e-21
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		3e-21
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		3e-21
4fie_A	423	Full-Length Human Pak4 Length = 423		4e-21
2xiy_A	301	Protein Kinase Pim-1 In Complex With Fragment-2 Fro		4e-21
3f2a_A	300	Crystal Structure Of Human Pim-1 In Complex With Da		4e-21
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		5e-21
3dcv_A	328	Crystal Structure Of Human Pim1 Kinase Complexed Wi		5e-21
2obj_A	333	Crystal Structure Of Human Pim-1 Kinase In Complex		5e-21
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		6e-21
2xix_A	301	Protein Kinase Pim-1 In Complex With Fragment-1 Fro		6e-21
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		6e-21
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		6e-21
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		6e-21
1yxs_A	293	Crystal Structure Of Kinase Pim1 With P123m Mutatio		6e-21
3p23_A	432	Crystal Structure Of The Human Kinase And Rnase Dom		9e-21
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		9e-21
3jxw_A	294	Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-		9e-21
2iwi_A	312	Crystal Structure Of The Human Pim2 In Complex With		9e-21
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		9e-21
1ywv_A	293	Crystal Structures Of Proto-Oncogene Kinase Pim1: A		9e-21
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		1e-20
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		1e-20
3r00_A	299	The Discovery Of Novel Benzofuran-2-Carboxylic Acid		1e-20
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		1e-20
3uix_A	298	Crystal Structure Of Pim1 Kinase In Complex With Sm		1e-20
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		1e-20
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		1e-20
4dtk_A	276	Novel And Selective Pan-Pim Kinase Inhibitor Length		1e-20
4as0_A	273	Cyclometalated Phthalimides As Protein Kinase Inhib		2e-20
3c4e_A	273	Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7		3e-20
4a7c_A	308	Crystal Structure Of Pim1 Kinase With Etp46546 Leng		4e-20
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		4e-20
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		5e-20
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		5e-20
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		5e-20
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		5e-20
2zv2_A	298	Crystal Structure Of Human CalciumCALMODULIN-Depend		6e-20
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		7e-20
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		1e-19
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		1e-19
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		1e-19
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		1e-19
1yhs_A	273	Crystal Structure Of Pim-1 Bound To Staurosporine L		2e-19
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		2e-19
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		4e-19
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		7e-19
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		7e-19
3dls_A	335	Crystal Structure Of Human Pas Kinase Bound To Adp		2e-18
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		3e-18
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		4e-18
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		6e-18
3txo_A	353	Pkc Eta Kinase In Complex With A Naphthyridine Leng		7e-18
3sdj_A	448	Structure Of Rnase-Inactive Point Mutant Of Oligome		7e-18
3fbv_A	448	Crystal Structure Of The Oligomer Formed By The Kin		7e-18
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		8e-18
4agu_A	311	Crystal Structure Of The Human Cdkl1 Kinase Domain		1e-17
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		1e-17
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		1e-17
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		1e-17
3a7f_A	303	Human Mst3 Kinase Length = 303		2e-17
2rio_A	434	Structure Of The Dual Enzyme Ire1 Reveals The Basis		2e-17
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		2e-17
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		2e-17
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		2e-17
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		3e-17
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		3e-17
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		3e-17
3lj0_A	434	Ire1 Complexed With Adp And Quercetin Length = 434		3e-17
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		4e-17
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		5e-17
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		5e-17
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		5e-17
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		6e-17
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		6e-17
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		7e-17
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		8e-17
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		8e-17
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		1e-16
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		1e-16
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		1e-16
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		1e-16
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		1e-16
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		1e-16
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		1e-16
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		1e-16
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		1e-16
4h58_A	275	Braf In Complex With Compound 3 Length = 275		2e-16
4alu_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		2e-16
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		2e-16
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		2e-16
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		2e-16
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		3e-16
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		3e-16
2esm_A	415	Crystal Structure Of Rock 1 Bound To Fasudil Length		3e-16
3v8s_A	410	Human Rho-Associated Protein Kinase 1 (Rock 1) In C		3e-16
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		3e-16
2v55_A	406	Mechanism Of Multi-site Phosphorylation From A Rock		3e-16
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		3e-16
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		3e-16
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		4e-16
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		4e-16
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		5e-16
3qa8_A	676	Crystal Structure Of Inhibitor Of Kappa B Kinase Be		5e-16
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		5e-16
3rzf_A	677	Crystal Structure Of Inhibitor Of Kappab Kinase Bet		5e-16
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		5e-16
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		5e-16
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		6e-16
1bjf_A	193	Crystal Structure Of Recombinant Bovine Neurocalcin		6e-16
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		6e-16
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		8e-16
4aw2_A	437	Crystal Structure Of Cdc42 Binding Protein Kinase A		1e-15
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		1e-15
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		1e-15
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		1e-15
2f2u_A	402	Crystal Structure Of The Rho-Kinase Kinase Domain L		2e-15
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		2e-15
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		2e-15
3t8o_A	543	Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu		2e-15
3c4w_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		2e-15
3qc9_A	543	Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4		2e-15
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		2e-15
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		2e-15
3c4x_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		2e-15
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		2e-15
3vul_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		2e-15
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		2e-15
3vum_A	370	Crystal Structure Of A Cysteine-deficient Mutant M7		2e-15
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		3e-15
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		3e-15
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		3e-15
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		3e-15
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		4e-15
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		4e-15
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		4e-15
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		4e-15
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		4e-15
2l2e_A	190	Solution Nmr Structure Of Myristoylated Ncs1p In Ap		4e-15
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		4e-15
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		4e-15
3npc_A	364	Crystal Structure Of Jnk2 Complexed With Birb796 Le		4e-15
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		4e-15
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		5e-15
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		5e-15
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		5e-15
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		5e-15
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		5e-15
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		5e-15
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		5e-15
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		5e-15
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		5e-15
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		5e-15
3hec_A	348	P38 In Complex With Imatinib Length = 348		5e-15
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		5e-15
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		5e-15
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		5e-15
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		5e-15
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		5e-15
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		5e-15
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		5e-15
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		5e-15
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		5e-15
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		5e-15
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		6e-15
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		6e-15
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		6e-15
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		6e-15
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		6e-15
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		6e-15
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		6e-15
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		6e-15
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		6e-15
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		6e-15
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		6e-15
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		6e-15
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		6e-15
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		6e-15
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		6e-15
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		6e-15
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		6e-15
4ewq_A	383	Human P38 Alpha Mapk In Complex With A Pyridazine B		7e-15
3vuk_A	370	Crystal Structure Of A Cysteine-deficient Mutant M5		7e-15
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		7e-15
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		7e-15
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		7e-15
3e7o_A	360	Crystal Structure Of Jnk2 Length = 360		7e-15
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		7e-15
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		7e-15
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		7e-15
2oza_B	366	Structure Of P38alpha Complex Length = 366		7e-15
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		7e-15
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		8e-15
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		8e-15
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		8e-15
1mp8_A	281	Crystal Structure Of Focal Adhesion Kinase (Fak) Le		8e-15
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		8e-15
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		8e-15
4ebw_A	304	Structure Of Focal Adhesion Kinase Catalytic Domain		8e-15
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		8e-15
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		8e-15
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		8e-15
2i6l_A	320	Crystal Structure Of Human Mitogen Activated Protei		8e-15
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		8e-15
2j0j_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		8e-15
2jkm_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		8e-15
2j0l_A	276	Crystal Structure Of A The Active Conformation Of T		9e-15
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		9e-15
2etm_A	281	Crystal Structure Of Focal Adhesion Kinase Domain C		9e-15
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		9e-15
2j0m_B	276	Crystal Structure A Two-Chain Complex Between The F		9e-15
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		9e-15
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		9e-15
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		9e-15
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		9e-15
3pxk_A	282	Focal Adhesion Kinase Catalytic Domain In Complex W		9e-15
3vui_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		1e-14
3zh8_A	349	A Novel Small Molecule Apkc Inhibitor Length = 349		1e-14
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		1e-14
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		1e-14
3bz3_A	276	Crystal Structure Analysis Of Focal Adhesion Kinase		1e-14
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		1e-14
4fr4_A	384	Crystal Structure Of Human SerineTHREONINE-Protein		1e-14
3a8w_A	345	Crystal Structure Of Pkciota Kinase Domain Length =		1e-14
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		1e-14
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		1e-14
2xs0_A	386	Linear Binding Motifs For Jnk And For Calcineurin A		1e-14
2puu_A	348	Crystal Structure Of P38 Complex With 1-(5-Tert-But		1e-14
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		1e-14
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		1e-14
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		1e-14
1zy4_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		1e-14
2jkk_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		1e-14
3mh2_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		1e-14
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		1e-14
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		1e-14
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		2e-14
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		2e-14
2j0k_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		2e-14
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		2e-14
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		2e-14
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		2e-14
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		2e-14
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		2e-14
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		3e-14
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		3e-14
3qfv_A	415	Mrck Beta In Complex With Tpca-1 Length = 415		3e-14
1jpa_A	312	Crystal Structure Of Unphosphorylated Ephb2 Recepto		3e-14
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		3e-14
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		3e-14
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		3e-14
3vuh_A	370	Crystal Structure Of A Cysteine-deficient Mutant M3		3e-14
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		3e-14
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		3e-14
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		3e-14
3tku_A	433	Mrck Beta In Complex With Fasudil Length = 433		3e-14
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		3e-14
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		3e-14
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		3e-14
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		3e-14
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		3e-14
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		3e-14
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		4e-14
2xrw_A	371	Linear Binding Motifs For Jnk And For Calcineurin A		4e-14
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		4e-14
3o8p_A	360	Conformational Plasticity Of P38 Map Kinase Dfg Mot		4e-14
3vug_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		4e-14
2b9f_A	353	Crystal Structure Of Non-Phosphorylated Fus3 Length		4e-14
3elj_A	369	Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine		4e-14
1ukh_A	369	Structural Basis For The Selective Inhibition Of Jn		4e-14
3vud_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		4e-14
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		4e-14
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		4e-14
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		4e-14
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		4e-14
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		4e-14
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		4e-14
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		4e-14
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		5e-14
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		5e-14
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		5e-14
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		5e-14
2b9h_A	353	Crystal Structure Of Fus3 With A Docking Motif From		5e-14
3pze_A	358	Jnk1 In Complex With Inhibitor Length = 358		5e-14
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		5e-14
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		5e-14
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		5e-14
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		5e-14
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		5e-14
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		5e-14
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		5e-14
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		5e-14
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		6e-14
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		6e-14
3gi3_A	360	Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana		6e-14
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		6e-14
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		6e-14
3ttj_A	464	Crystal Structure Of Jnk3 Complexed With Cc-359, A		6e-14
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		7e-14
3mh0_A	360	Mutagenesis Of P38 Map Kinase Eshtablishes Key Role		7e-14
2zmc_A	390	Crystal Structure Of Human Mitotic Checkpoint Kinas		7e-14
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		7e-14
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		7e-14
3kvx_A	364	Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le		7e-14
3hmn_A	342	Crystal Structure Of Human Mps1 Catalytic Domain In		7e-14
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		8e-14
3mh3_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		8e-14
2r9s_A	356	C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu		8e-14
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		8e-14
3fi3_A	364	Crystal Structure Of Jnk3 With Indazole Inhibitor,		8e-14
2zmd_A	390	Crystal Structure Of Human Mps1 Catalytic Domain T6		8e-14
3mh1_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		8e-14
3v3v_A	379	Structural And Functional Analysis Of Quercetagetin		9e-14
2o0u_A	364	Crystal Structure Of Human Jnk3 Complexed With N-{3		9e-14
2exc_X	356	Inhibitor Complex Of Jnk3 Length = 356		9e-14
1pmn_A	364	Crystal Structure Of Jnk3 In Complex With An Imidaz		9e-14
2ok1_A	365	Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3		9e-14
3ptg_A	363	Design And Synthesis Of A Novel, Orally Efficacious		9e-14
4h36_A	356	Crystal Structure Of Jnk3 In Complex With Atf2 Pept		9e-14
3oxi_A	362	Design And Synthesis Of Disubstituted Thiophene And		9e-14
1jnk_A	423	The C-Jun N-Terminal Kinase (Jnk3s) Complexed With		1e-13
3fi2_A	353	Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib		1e-13
2b1p_A	355	Inhibitor Complex Of Jnk3 Length = 355		1e-13
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		1e-13
1zyc_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		1e-13
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		1e-13
3fv8_A	355	Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le		1e-13
2r2i_A	198	Myristoylated Guanylate Cyclase Activating Protein-		1e-13
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		1e-13
3dbq_A	343	Crystal Structure Of Ttk Kinase Domain Length = 343		1e-13
3cek_A	313	Crystal Structure Of Human Dual Specificity Protein		1e-13
3sxr_A	268	Crystal Structure Of Bmx Non-Receptor Tyrosine Kina		2e-13
1h4l_A	292	Structure And Regulation Of The Cdk5-P25(Nck5a) Com		2e-13
3vqu_A	320	Crystal Structure Of Human Mps1 Catalytic Domain In		2e-13
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		2e-13
3zzw_A	289	Crystal Structure Of The Kinase Domain Of Ror2 Leng		2e-13
2g01_A	370	Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit		2e-13
2vwu_A	302	Ephb4 Kinase Domain Inhibitor Complex Length = 302		2e-13
4gt4_A	308	Structure Of Unliganded, Inactive Ror2 Kinase Domai		2e-13
2x9e_A	317	Human Mps1 In Complex With Nms-P715 Length = 317		2e-13
2w9f_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		2e-13
2f9g_A	353	Crystal Structure Of Fus3 Phosphorylated On Tyr182		2e-13
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		2e-13
2w96_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		2e-13
2hen_A	286	Crystal Structure Of The Ephb2 Receptor Kinase Doma		2e-13
3o17_A	370	Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3		2e-13
1cm8_A	367	Phosphorylated Map Kinase P38-Gamma Length = 367		2e-13
4aw5_A	291	Complex Of The Ephb4 Kinase Domain With An Oxindole		2e-13
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		3e-13
2zoq_A	382	Structural Dissection Of Human Mitogen-Activated Ki		3e-13
3oz6_A	388	Crystal Structure Of Mapk From Cryptosporidium Parv		3e-13
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		3e-13
3mtl_A	324	Crystal Structure Of The Pctaire1 Kinase In Complex		3e-13
1ung_A	292	Structural Mechanism For The Inhibition Of Cdk5-P25		4e-13
3krw_A	688	Human Grk2 In Complex With Gbetgamma Subunits And B		4e-13
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		4e-13
3cik_A	689	Human Grk2 In Complex With Gbetagamma Subunits Leng		4e-13
3p08_A	267	Crystal Structure Of The Human Btk Kinase Domain Le		4e-13
1k2p_A	263	Crystal Structure Of Bruton's Tyrosine Kinase Domai		4e-13
3pix_A	274	Crystal Structure Of Btk Kinase Domain Complexed Wi		4e-13
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		4e-13
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		4e-13
1omw_A	689	Crystal Structure Of The Complex Between G Protein-		5e-13
4b99_A	398	Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le		5e-13
3psc_A	695	Bovine Grk2 In Complex With Gbetagamma Subunits Len		5e-13
3sa0_A	360	Complex Of Erk2 With Norathyriol Length = 360		5e-13
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		5e-13
3gen_A	283	The 1.6 A Crystal Structure Of Human Bruton's Tyros		5e-13
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		5e-13
3ocs_A	271	Crystal Structure Of Bruton's Tyrosine Kinase In Co		5e-13
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		5e-13
1rqq_A	306	Crystal Structure Of The Insulin Receptor Kinase In		6e-13
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		6e-13
1g8i_A	190	Crystal Structure Of Human Frequenin (Neuronal Calc		6e-13
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		7e-13
4ic7_A	442	Crystal Structure Of The Erk5 Kinase Domain In Comp		7e-13
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		7e-13
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		7e-13
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		7e-13
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		7e-13
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		7e-13
1gol_A	364	Coordinates Of Rat Map Kinase Erk2 With An Arginine		7e-13
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		7e-13
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		7e-13
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		8e-13
1u59_A	287	Crystal Structure Of The Zap-70 Kinase Domain In Co		8e-13
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		8e-13
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		8e-13
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		8e-13
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		8e-13
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		8e-13
3h9f_A	313	Crystal Structure Of Human Dual Specificity Protein		8e-13
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		9e-13
2qoi_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		1e-12
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		1e-12
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		1e-12
3fxx_A	371	Human Epha3 Kinase And Juxtamembrane Region Bound T		1e-12
2qon_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		1e-12
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		1e-12
2qof_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f		1e-12
2qod_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y602f		1e-12
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		1e-12
2qob_A	344	Human Epha3 Kinase Domain, Base Structure Length =		1e-12
3zuv_A	364	Crystal Structure Of A Designed Selected Ankyrin Re		1e-12
2erk_A	365	Phosphorylated Map Kinase Erk2 Length = 365		1e-12
2gsf_A	373	The Human Epha3 Receptor Tyrosine Kinase And Juxtam		1e-12
3ekk_A	307	Insulin Receptor Kinase Complexed With An Inhibitor		1e-12
2qo7_A	373	Human Epha3 Kinase And Juxtamembrane Region, Dephos		1e-12
1p14_A	306	Crystal Structure Of A Catalytic-Loop Mutant Of The		1e-12
3eta_A	317	Kinase Domain Of Insulin Receptor Complexed With A		1e-12
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		2e-12
1irk_A	306	Crystal Structure Of The Tyrosine Kinase Domain Of		2e-12
2qok_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		2e-12
2wtk_C	305	Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2		2e-12
3a4o_X	286	Lyn Kinase Domain Length = 286		2e-12
4exu_A	371	Mapk13, Inactive Form Length = 371		2e-12
2z8c_A	303	Phosphorylated Insulin Receptor Tyrosine Kinase In		2e-12
2ozo_A	613	Autoinhibited Intact Human Zap-70 Length = 613		3e-12
1ir3_A	306	Phosphorylated Insulin Receptor Tyrosine Kinase In		3e-12
3oct_A	265	Crystal Structure Of Bruton's Tyrosine Kinase Mutan		3e-12
2qol_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596:y		3e-12
1i44_A	306	Crystallographic Studies Of An Activation Loop Muta		3e-12
3k54_A	283	Structures Of Human Bruton's Tyrosine Kinase In Act		3e-12
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		3e-12
3kvw_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		3e-12
3lct_A	344	Crystal Structure Of The Anaplastic Lymphoma Kinase		4e-12
3l9p_A	367	Crystal Structure Of The Anaplastic Lymphoma Kinase		4e-12
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		4e-12
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		4e-12
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		4e-12
3k2l_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		4e-12
4azf_A	417	Human Dyrk2 In Complex With Leucettine L41 Length =		4e-12
2vd5_A	412	Structure Of Human Myotonic Dystrophy Protein Kinas		4e-12
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		4e-12
3coi_A	353	Crystal Structure Of P38delta Kinase Length = 353		5e-12
1zxe_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		6e-12
3bea_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P		7e-12
2r2p_A	295	Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep		7e-12
4euu_A	319	Structure Of Bx-795 Complexed With Human Tbk1 Kinas		7e-12
4eut_A	396	Structure Of Bx-795 Complexed With Unphosphorylated		7e-12
2i1m_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An		7e-12
1s1e_A	224	Crystal Structure Of Kv Channel-Interacting Protein		8e-12
3pls_A	298	Ron In Complex With Ligand Amp-Pnp Length = 298		8e-12
4fl3_A	635	Structural And Biophysical Characterization Of The		9e-12
4fl2_A	636	Structural And Biophysical Characterization Of The		1e-11
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		1e-11
4g31_A	299	Crystal Structure Of Gsk6414 Bound To Perk (R587-R1		1e-11
4fnx_A	327	Crystal Structure Of The Apo R1275q Anaplastic Lymp		1e-11
1ua2_A	346	Crystal Structure Of Human Cdk7 Length = 346		1e-11
2xp2_A	327	Structure Of The Human Anaplastic Lymphoma Kinase I		1e-11
2xb7_A	315	Structure Of Human Anaplastic Lymphoma Kinase In Co		2e-11
3aox_A	344	X-Ray Crystal Structure Of Human Anaplastic Lymphom		2e-11
4fnz_A	327	Crystal Structure Of Human Anaplastic Lymphoma Kina		2e-11
2yjr_A	342	Structure Of F1174l Mutant Anaplastic Lymphoma Kina		2e-11
4dce_A	333	Crystal Structure Of Human Anaplastic Lymphoma Kina		2e-11
4fnw_A	327	Crystal Structure Of The Apo F1174l Anaplastic Lymp		2e-11
3tub_A	293	Crystal Structure Of Syk Kinase Domain With 1-(5-(6		2e-11
3vf8_A	299	Crystal Structure Of Spleen Tyrosine Kinase Syk Cat		2e-11
2yjs_A	342	Structure Of C1156y Mutant Anaplastic Lymphoma Kina		2e-11
3emg_A	291	Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylami		2e-11
3qqu_A	301	Cocrystal Structure Of Unphosphorylated Igf With Py		2e-11
3o23_A	305	Human Unphosphorylated Igf1-R Kinase Domain In Comp		2e-11
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		2e-11
4fob_A	353	Crystal Structure Of Human Anaplastic Lymphoma Kina		2e-11
4f4p_A	273	Syk In Complex With Ligand Lasw836 Length = 273		2e-11
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		2e-11
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		2e-11
3srv_B	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		2e-11
3i81_A	315	Crystal Structure Of Insulin-Like Growth Factor 1 R		2e-11
2oj9_A	307	Structure Of Igf-1r Kinase Domain Complexed With A		2e-11
1jqh_A	308	Igf-1 Receptor Kinase Domain Length = 308		2e-11
1m7n_A	322	Crystal Structure Of Unactivated Apo Insulin-Like G		2e-11
4dfl_A	274	Crystal Structure Of Spleen Tyrosine Kinase Complex		2e-11
2yfx_A	327	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		2e-11
1xba_A	291	Crystal Structure Of Apo Syk Tyrosine Kinase Domain		2e-11
3lvp_A	336	Crystal Structure Of Bisphosphorylated Igf1-R Kinas		3e-11
2yhv_A	342	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		3e-11
4e7w_A	394	Structure Of Gsk3 From Ustilago Maydis Length = 394		3e-11
1k3a_A	299	Structure Of The Insulin-Like Growth Factor 1 Recep		3e-11
3aln_A	327	Crystal Structure Of Human Non-Phosphorylated Mkk4		3e-11
2zm3_A	308	Complex Structure Of Insulin-Like Growth Factor Rec		3e-11
3e3p_A	360	Glycogen Synthase Kinase From Leishmania Major Leng		3e-11
2jul_A	256	Nmr Structure Of Dream Length = 256		4e-11
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		5e-11
2rei_A	318	Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep		5e-11
3v5q_A	297	Discovery Of A Selective Trk Inhibitor With Efficac		5e-11
3d94_A	301	Crystal Structure Of The Insulin-Like Growth Factor		5e-11
2hel_A	306	Crystal Structure Of A Mutant Epha4 Kinase Domain (		6e-11
2y6m_A	291	Crystal Structure Of Epha4 Kinase Domain Length = 2		6e-11
3lw0_A	304	Igf-1rk In Complex With Ligand Msc1609119a-1 Length		6e-11
2xyu_A	285	Crystal Structure Of Epha4 Kinase Domain In Complex		7e-11
3nyx_A	302	Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T		7e-11
3srv_A	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		8e-11
3nz0_A	302	Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3		8e-11
1p4o_A	322	Structure Of Apo Unactivated Igf-1r Kinase Domain A		9e-11
3lxn_A	318	Structural And Thermodynamic Characterization Of Th		9e-11
3gbz_A	329	Structure Of The Cmgc Cdk Kinase From Giardia Lambl		1e-10
4ec8_A	373	Structure Of Full Length Cdk9 In Complex With Cycli		1e-10
3blh_A	331	Crystal Structure Of Human Cdk9CYCLINT1 Length = 33		1e-10
4e20_A	290	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		1e-10
4e1z_A	291	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		1e-10
3mi9_A	351	Crystal Structure Of Hiv-1 Tat Complexed With Human		1e-10
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		1e-10
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		1e-10
1s6c_A	183	Crystal Structure Of The Complex Between Kchip1 And		1e-10
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		1e-10
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		1e-10
3dd4_A	229	Structural Basis Of Kchip4a Modulation Of Kv4.3 Slo		2e-10
4bcf_A	331	Structure Of Cdk9 In Complex With Cyclin T And A 2-		2e-10
1jba_A	204	Unmyristoylated Gcap-2 With Three Calcium Ions Boun		2e-10
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		2e-10
3p1a_A	311	Structure Of Human Membrane-Associated Tyrosine- An		2e-10
1luf_A	343	Crystal Structure Of The Musk Tyrosine Kinase: Insi		2e-10
2oo8_X	317	Synthesis, Structural Analysis, And Sar Studies Of		3e-10
1fvr_A	327	Tie2 Kinase Domain Length = 327		3e-10
3uiu_A	306	Crystal Structure Of Apo-Pkr Kinase Domain Length =		4e-10
1h8f_A	352	Glycogen Synthase Kinase 3 Beta. Length = 352		4e-10
2ogv_A	317	Crystal Structure Of The Autoinhibited Human C-Fms		5e-10
1ad5_A	438	Src Family Kinase Hck-Amp-Pnp Complex Length = 438		5e-10
2nz0_A	180	Crystal Structure Of Potassium Channel Kv4.3 In Com		5e-10
3lcd_A	329	Inhibitor Bound To A Dfg-In Structure Of The Kinase		5e-10
2i2r_E	180	Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX Len		5e-10
1uv5_A	350	Glycogen Synthase Kinase 3 Beta Complexed With 6-Br		6e-10
2h34_A	309	Apoenzyme Crystal Structure Of The Tuberculosis Ser		6e-10
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		6e-10
3dkg_A	317	Sgx Clone 5698a109kfg1h1 Length = 317		7e-10
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		8e-10
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		8e-10
2buj_A	317	Crystal Structure Of The Human Serine-Threonine Kin		8e-10
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		9e-10
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		9e-10
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		9e-10
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		9e-10
3c4f_A	302	Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M		9e-10
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		9e-10
3js2_A	317	Crystal Structure Of Minimal Kinase Domain Of Fibro		9e-10
2wqb_A	324	Structure Of The Tie2 Kinase Domain In Complex With		9e-10
3gql_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		1e-09
3tt0_A	382	Co-Structure Of Fibroblast Growth Factor Receptor 1		1e-09
4f63_A	309	Crystal Structure Of Human Fibroblast Growth Factor		1e-09
3q6w_A	307	Structure Of Dually-phosphorylated Met Receptor Kin		1e-09
3rhx_B	306	Crystal Structure Of The Catalytic Domain Of Fgfr1		1e-09
1fgk_A	310	Crystal Structure Of The Tyrosine Kinase Domain Of		1e-09
2i94_A	202	Nmr Structure Of Recoverin Bound To Rhodopsin Kinas		1e-09
3kxx_A	317	Structure Of The Mutant Fibroblast Growth Factor Re		1e-09
1r0p_A	312	Crystal Structure Of The Tyrosine Kinase Domain Of		1e-09
1omr_A	201	Non-Myristoylated Wild-Type Bovine Recoverin With C		1e-09
3q6u_A	308	Structure Of The Apo Met Receptor Kinase In The Dua		1e-09
1jsa_A	201	Myristoylated Recoverin With Two Calciums Bound, Nm		1e-09
3cth_A	314	Crystal Structure Of The Tyrosine Kinase Domain Of		1e-09
2pl0_A	289	Lck Bound To Imatinib Length = 289		1e-09
3dkc_A	317	Sgx Clone 5698a65kfg1h1 Length = 317		1e-09
2g15_A	318	Structural Characterization Of Autoinhibited C-Met		1e-09
2wd1_A	292	Human C-Met Kinase In Complex With Azaindole Inhibi		1e-09
3qti_A	314	C-Met Kinase In Complex With Nvp-Bvu972 Length = 31		1e-09
3a4p_A	319	Human C-Met Kinase Domain Complexed With 6-Benzylox		1e-09
2het_A	189	Non-Myristoylated Bovine Recoverin (Truncated At C-		1e-09
4gg5_A	319	Crystal Structure Of Cmet In Complex With Novel Inh		1e-09
2rfn_A	310	X-ray Structure Of C-met With Inhibitor. Length = 3		1e-09
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		1e-09
3lq8_A	302	Structure Of The Kinase Domain Of C-Met Bound To Xl		1e-09
3i5n_A	309	Crystal Structure Of C-Met With Triazolopyridazine		1e-09
3c1x_A	373	Crystal Structure Of The Tyrosine Kinase Domain Of		1e-09
1q5k_A	414	Crystal Structure Of Glycogen Synthase Kinase 3 In		1e-09
3fzo_A	277	Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin		1e-09
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		1e-09
2wgj_A	306	X-Ray Structure Of Pf-02341066 Bound To The Kinase		1e-09
3f66_A	298	Human C-Met Kinase In Complex With Quinoxaline Inhi		1e-09
1i09_A	420	Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len		1e-09
4h1j_A	293	Crystal Structure Of Pyk2 With The Pyrazole 13a Len		2e-09
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		2e-09
3cc6_A	281	Crystal Structure Of Kinase Domain Of Protein Tyros		2e-09
2o5k_A	372	Crystal Structure Of Gsk3beta In Complex With A Ben		2e-09
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		2e-09
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		2e-09
1gng_A	378	Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With		2e-09
4afj_A	367	5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec		2e-09
3zrk_A	371	Identification Of 2-(4-Pyridyl)thienopyridinones As		2e-09
3say_A	430	Crystal Structure Of Human Glycogen Synthase Kinase		2e-09
1r0e_A	391	Glycogen Synthase Kinase-3 Beta In Complex With 3-I		2e-09
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		2e-09
1pyx_A	422	Gsk-3 Beta Complexed With Amp-Pnp Length = 422		2e-09
3pp0_A	338	Crystal Structure Of The Kinase Domain Of Human Her		2e-09
4dit_A	382	Crystal Structure Of Gsk3beta In Complex With A Imi		2e-09
3s95_A	310	Crystal Structure Of The Human Limk1 Kinase Domain		2e-09
1q3d_A	424	Gsk-3 Beta Complexed With Staurosporine Length = 42		2e-09
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		2e-09
2jiv_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		2e-09
1rjb_A	344	Crystal Structure Of Flt3 Length = 344		2e-09
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		2e-09
2pvy_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-09
4acc_A	465	Gsk3b In Complex With Inhibitor Length = 465		2e-09
3f7z_A	350	X-ray Co-crystal Structure Of Glycogen Synthase Kin		2e-09
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		2e-09
3sd0_A	350	Identification Of A Glycogen Synthase Kinase-3b Inh		2e-09
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		2e-09
3zdi_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		2e-09
1omv_A	201	Non-Myristoylated Bovine Recoverin (E85q Mutant) Wi		2e-09
2ow3_A	352	Glycogen Synthase Kinase-3 Beta In Complex With Bis		2e-09
2d8n_A	207	Crystal Structure Of Human Recoverin At 2.2 A Resol		2e-09
1o9u_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		2e-09
1la3_A	201	Solution Structure Of Recoverin Mutant, E85q Length		2e-09
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		2e-09
3gb2_A	353	Gsk3beta Inhibitor Complex Length = 353		2e-09
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		3e-09
3eb0_A	383	Crystal Structure Of Cgd4_240 From Cryptosporidium		3e-09
2eu9_A	355	Crystal Structure Of Clk3 Length = 355		3e-09
3f88_A	349	Glycogen Synthase Kinase 3beta Inhibitor Complex Le		3e-09
3ri1_A	313	Crystal Structure Of The Catalytic Domain Of Fgfr2		3e-09
1gjo_A	316	The Fgfr2 Tyrosine Kinase Domain Length = 316		3e-09
2exe_A	357	Crystal Structure Of The Phosphorylated Clk3 Length		3e-09
2wu6_A	381	Crystal Structure Of The Human Clk3 In Complex With		3e-09
4dn5_A	356	Crystal Structure Of Nf-kb-inducing Kinase (nik) Le		3e-09
3b2t_A	311	Structure Of Phosphotransferase Length = 311		3e-09
2rfd_A	324	Crystal Structure Of The Complex Between The Egfr K		3e-09
2pzp_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-09
2psq_A	370	Crystal Structure Of Unphosphorylated Unactivated W		3e-09
3nr9_A	368	Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length		4e-09
2ggz_A	211	Crystal Structure Of Human Guanylate Cyclase Activa		4e-09
4i24_A	329	Structure Of T790m Egfr Kinase Domain Co-crystalliz		4e-09
3ika_A	331	Crystal Structure Of Egfr 696-1022 T790m Mutant Cov		4e-09
2jiu_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		4e-09
1na7_A	329	Crystal Structure Of The Catalytic Subunit Of Human		4e-09
2p6b_B	156	Crystal Structure Of Human Calcineurin In Complex W		4e-09
3gqi_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		4e-09
2jit_A	327	Crystal Structure Of Egfr Kinase Domain T790m Mutat		4e-09
4g5p_A	330	Crystal Structure Of Egfr Kinase T790m In Complex W		4e-09
3bbt_B	328	Crystal Structure Of The Erbb4 Kinase In Complex Wi		4e-09
3orn_A	307	Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In		5e-09
2j5e_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		5e-09
1tco_B	169	Ternary Complex Of A Calcineurin A Fragment, Calcin		5e-09
3rgf_A	405	Crystal Structure Of Human Cdk8CYCC Length = 405		5e-09
1mf8_B	170	Crystal Structure Of Human Calcineurin Complexed Wi		6e-09
2a19_B	284	Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng		6e-09
4g3d_A	371	Crystal Structure Of Human Nf-kappab Inducing Kinas		6e-09
3ll8_B	155	Crystal Structure Of Calcineurin In Complex With Ak		6e-09
2pwl_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		6e-09
3lco_A	324	Inhibitor Bound To A Dfg-Out Structure Of The Kinas		6e-09
2r4b_A	321	Erbb4 Kinase Domain Complexed With A Thienopyrimidi		7e-09
2pz5_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		7e-09
2pzr_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		7e-09
1s9i_A	354	X-Ray Structure Of The Human Mitogen-Activated Prot		7e-09
4hjo_A	337	Crystal Structure Of The Inactive Egfr Tyrosine Kin		8e-09
2gs7_A	330	Crystal Structure Of The Inactive Egfr Kinase Domai		8e-09
3kul_B	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		8e-09
1m14_A	333	Tyrosine Kinase Domain From Epidermal Growth Factor		9e-09
4g5j_A	330	Crystal Structure Of Egfr Kinase In Complex With Bi		9e-09
3vjo_A	334	Crystal Structure Of The Wild-Type Egfr Kinase Doma		9e-09
3kul_A	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		9e-09
2gs2_A	330	Crystal Structure Of The Active Egfr Kinase Domain		9e-09
2j5f_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		9e-09
4i23_A	329	Crystal Structure Of The Wild-type Egfr Kinase Doma		1e-08
1xkk_A	352	Egfr Kinase Domain Complexed With A Quinazoline Inh		1e-08
3bel_A	315	X-Ray Structure Of Egfr In Complex With Oxime Inhib		1e-08
3lzb_A	327	Egfr Kinase Domain Complexed With An Imidazo[2,1-B]		1e-08
1fpw_A	190	Structure Of Yeast Frequenin Length = 190		1e-08
2i0v_A	335	C-Fms Tyrosine Kinase In Complex With A Quinolone I		1e-08
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		1e-08
2q0b_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-08
3pg1_A	362	Map Kinase Lmampk10 From Leishmania Major (1.95 Ang		2e-08
3uib_A	362	Map Kinase Lmampk10 From Leishmania Major In Comple		2e-08
2y4i_C	395	Ksr2-Mek1 Heterodimer Length = 395		2e-08
3gop_A	361	Crystal Structure Of The Egf Receptor Juxtamembrane		2e-08
3eqc_A	360	X-Ray Structure Of The Human Mitogen-Activated Prot		2e-08
3ug1_A	334	Crystal Structure Of The Mutated Egfr Kinase Domain		2e-08
4i1z_A	329	Crystal Structure Of The Monomeric (v948r) Form Of		2e-08
3w2o_A	331	Egfr Kinase Domain T790m/l858r Mutant With Tak-285		2e-08
2p0c_A	313	Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro		2e-08
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		2e-08
3qd2_B	332	Crsytal Structure Of Mouse Perk Kinase Domain Lengt		2e-08
4i21_A	329	Crystal Structure Of L858r + T790m Egfr Kinase Doma		2e-08
2py3_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-08
2vx3_A	382	Crystal Structure Of The Human Dual Specificity Tyr		2e-08
3anq_A	368	Human Dyrk1aINHIBITOR COMPLEX Length = 368		3e-08
1how_A	373	The X-Ray Crystal Structure Of Sky1p, An Sr Protein		3e-08
1t46_A	313	Structural Basis For The Autoinhibition And Sti-571		3e-08
2pvf_A	334	Crystal Structure Of Tyrosine Phosphorylated Activa		3e-08
2p55_A	333	X-Ray Structure Of The Human Mitogen-Activated Prot		3e-08
1pkg_A	329	Structure Of A C-kit Kinase Product Complex Length		3e-08
1q8y_A	373	The Structure Of The Yeast Sr Protein Kinase, Sky1p		3e-08
3cly_A	334	Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase		3e-08
4hzs_A	341	Crystal Structure Of Ack1 Kinase Domain With C-term		3e-08
1s9j_A	341	X-Ray Structure Of The Human Mitogen-Activated Prot		3e-08
1u54_A	291	Crystal Structures Of The Phosphorylated And Unphos		3e-08
3mbl_A	328	Crystal Structure Of The Human Mitogen-Activated Pr		3e-08
3dv3_A	322	Mek1 With Pf-04622664 Bound Length = 322		3e-08
3g0f_A	336	Kit Kinase Domain Mutant D816h In Complex With Suni		3e-08
1t45_A	331	Structural Basis For The Autoinhibition And Sti-571		3e-08
3g0e_A	336	Kit Kinase Domain In Complex With Sunitinib Length		4e-08
4hzr_A	277	Crystal Structure Of Ack1 Kinase Domain Length = 27		4e-08
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		4e-08
1u46_A	291	Crystal Structure Of The Unphosphorylated Kinase Do		4e-08
4ewh_B	275	Co-Crystal Structure Of Ack1 With Inhibitor Length		4e-08
4g3f_A	336	Crystal Structure Of Murine Nf-kappab Inducing Kina		4e-08
4id7_A	273	Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-		4e-08
3eqp_B	276	Crystal Structure Of Ack1 With Compound T95 Length		4e-08
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		4e-08
4g3c_A	352	Crystal Structure Of Apo Murine Nf-kappab Inducing		4e-08
4g3g_A	350	Crystal Structure Of Murine Nf-kappab Inducing Kina		4e-08
2eb2_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (G7		4e-08
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		4e-08
4i20_A	329	Crystal Structure Of Monomeric (v948r) Primary Onco		5e-08
4aze_A	382	Human Dyrk1a In Complex With Leucettine L41 Length		5e-08
2eb3_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (L8		5e-08
2itn_A	327	Crystal Structure Of Egfr Kinase Domain G719s Mutat		5e-08
2itt_A	327	Crystal Structure Of Egfr Kinase Domain L858r Mutat		6e-08
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		6e-08
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		6e-08
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		6e-08
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		6e-08
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		6e-08

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score =  235 bits (600), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 148/444 (33%), Positives = 236/444 (53%), Gaps = 53/444 (11%)
Query: 80  SDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERY 139
           S++ L  E+ V++ +      HPN++ LYD +ED+   +L++E   GGELFD I+ + ++
Sbjct: 79  SNSKLLEEVAVLKLL-----DHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKF 133
Query: 140 MEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD 199
            EV AA +I+Q+  G+  LH+ NIVHRDLKPEN L  +  +D+ +KI+DFGLS+V     
Sbjct: 134 NEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK 193
Query: 200 PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAG 259
            +    G+  Y++PE +L+ +   K D+WS+GVIL+ILL+GYPPF  Q++++  + +  G
Sbjct: 194 KMKERLGTAYYIAPE-VLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKG 252
Query: 260 EFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAKEE---EMD--A 314
           +++F    WKN+S  AK LI  +L  D  RR SAQ+ L HPW+    +K+E   E+   A
Sbjct: 253 KYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMCSKKESGIELPSLA 312
Query: 315 EIVSRLQSFNARRKLRAAAIASVLSSTIFLRRTKKLKNLLGSHDLNEEEIQNLRIHFRTI 374
             +  ++ F   +KL  AA+  + S       TK+L ++                 FR I
Sbjct: 313 NAIENMRKFQNSQKLAQAALLYMASKLTSQEETKELTDI-----------------FRHI 355
Query: 375 CANGDNATLSEFEEVLKAMNMSSLVPLAPRIFDL-------------FDNNRDGTVDMRE 421
             NGD     + +E++   +  S   +A  +FDL              D +R+G +D  E
Sbjct: 356 DKNGDGQL--DRQELIDGYSKLSGEEVA--VFDLPQIESEVDAILGAADFDRNGYIDYSE 411
Query: 422 ILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLD 481
            +      +     D L   FQ +D D +G I+ +E+AS+          +D  E     
Sbjct: 412 FVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASV--------FGLDHLESKTWK 463
Query: 482 EIFDLMDANNDGKVTFDEFRAAMQ 505
           E+   +D+NNDG V F+EF   +Q
Sbjct: 464 EMISGIDSNNDGDVDFEEFCKMIQ 487

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score =  232 bits (591), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 167/512 (32%), Positives = 261/512 (50%), Gaps = 69/512 (13%)
Query: 8   LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQ 67
           L+D Y+    LG G +  V     K  G   + AIK +++   TT               
Sbjct: 2   LSDRYQRVKKLGSGAYGEVLLCKDKLTG--AERAIKIIKKSSVTT--------------- 44
Query: 68  IGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGG 127
                     S S ALL +E+ V++++      HPN++ LY+ +ED+   +L++E+  GG
Sbjct: 45  ---------TSNSGALL-DEVAVLKQL-----DHPNIMKLYEFFEDKRNYYLVMEVYRGG 89
Query: 128 ELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIM 187
           ELFD I+ ++++ EV AA +++Q+  G   LH+ NIVHRDLKPEN L  +   D+ +KI+
Sbjct: 90  ELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIV 149
Query: 188 DFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQ 247
           DFGLS+       +    G+  Y++PE +L+ +   K D+WS GVILYILL GYPPF  Q
Sbjct: 150 DFGLSAHFEVGGKMKERLGTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCGYPPFGGQ 208
Query: 248 SNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIG-DS 306
           ++++  + +  G+FSF    W  +S  AKQL+  +LT +P++R SA+E LNHPW++   S
Sbjct: 209 TDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRISAEEALNHPWIVKFCS 268
Query: 307 AKEEEMDAEIVS----RLQSFNARRKLRAAAIASVLSSTIFLRRTKKLKNLLGSHDLN-- 360
            K  ++    ++     ++ F + +KL  AA+  + S    L  TK+L  +    D N  
Sbjct: 269 QKHTDVGKHALTGALGNMKKFQSSQKLAQAAMLFMGSKLTTLEETKELTQIFRQLDNNGD 328
Query: 361 -----EEEIQNLRIHFRTICANGDNATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDG 415
                +E I+  R   + +   GD  T+S+       ++ S +      I    D +R+G
Sbjct: 329 GQLDRKELIEGYR---KLMQWKGD--TVSD-------LDSSQIEAEVDHILQSVDFDRNG 376
Query: 416 TVDMREI--LCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVD 473
            ++  E   +C    L  S+  + L   FQ +D D SG IT EE+  +      D    D
Sbjct: 377 YIEYSEFVTVCMDKQLLLSR--ERLLAAFQQFDSDGSGKITNEELGRLFGVTEVD----D 430
Query: 474 ITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQ 505
            T    L E     D NNDG+V F+EF   MQ
Sbjct: 431 ETWHQVLQEC----DKNNDGEVDFEEFVEMMQ 458

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score =  217 bits (552), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 138/435 (31%), Positives = 223/435 (51%), Gaps = 44/435 (10%)
Query: 84  LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVG 143
           + NEI +++ +      HPN+I L+DV+ED+   +L+ E   GGELF++I+ + ++ E  
Sbjct: 93  IYNEISLLKSL-----DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECD 147
Query: 144 AAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVG 203
           AA +++QI  G+  LH+ NIVHRD+KPEN L  N      +KI+DFGLSS       +  
Sbjct: 148 AANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRD 207
Query: 204 LFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSF 263
             G+  Y++PE +L+ +   K D+WS GVI+YILL GYPPF  Q+++   + +  G++ F
Sbjct: 208 RLGTAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYF 266
Query: 264 YEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAKEEEMDAEI----VSR 319
               WKNIS  AK+LI  +LT D N+R +A+E LN  W+   +    + D +     +S 
Sbjct: 267 DFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANNINKSDQKTLCGALSN 326
Query: 320 LQSFNARRKLRAAAIASVLSSTIFLRRTKKLKNLLGSHDLNEEEIQNLRIHFRTICANG- 378
           ++ F   +KL  AAI  + S    L   K+L ++                 F+ +  NG 
Sbjct: 327 MRKFEGSQKLAQAAILFIGSKLTTLEERKELTDI-----------------FKKLDKNGD 369
Query: 379 ---DNATLSEFEEVLKAMN-----MSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLR 430
              D   L E   VL+        + ++      I    D +++G ++  E +      +
Sbjct: 370 GQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCMDKQ 429
Query: 431 KSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDAN 490
               ++ LR  F ++D D+SG ITKEE+A++            I+E    +++    D N
Sbjct: 430 ILFSEERLRRAFNLFDTDKSGKITKEELANLFGL-------TSISEK-TWNDVLGEADQN 481
Query: 491 NDGKVTFDEFRAAMQ 505
            D  + FDEF + M 
Sbjct: 482 KDNMIDFDEFVSMMH 496

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score =  216 bits (550), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 125/339 (36%), Positives = 182/339 (53%), Gaps = 35/339 (10%)
Query: 7   KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXX 66
           + TD+Y++ + LG+G FSVVRR +KKT   T + A K +                     
Sbjct: 28  RFTDDYQLFEELGKGAFSVVRRCVKKT--PTQEYAAKIIN-------------------- 65
Query: 67  QIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSG 126
                 T+K  +     L  E  + R +      HPN++ L+D   ++   +L+ +L +G
Sbjct: 66  ------TKKLSARDHQKLEREARICRLL-----KHPNIVRLHDSISEEGFHYLVFDLVTG 114
Query: 127 GELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKI 186
           GELF+ IVA+E Y E  A+  I QI E +  +HQ +IVHRDLKPEN L  +  + + +K+
Sbjct: 115 GELFEDIVAREYYSEADASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKL 174
Query: 187 MDFGLS-SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFI 245
            DFGL+  V+G      G  G+  Y+SPE L +D      D+W+ GVILYILL GYPPF 
Sbjct: 175 ADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFW 234
Query: 246 AQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGD 305
            +   +  Q I AG + F    W  ++  AK LI+ +LT++P +R +A + L HPWV   
Sbjct: 235 DEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRITADQALKHPWVCQR 294
Query: 306 SAKEEEMD-AEIVSRLQSFNARRKLRAAAIASVLSSTIF 343
           S     M   E V  L+ FNARRKL+ A + ++L S  F
Sbjct: 295 STVASMMHRQETVECLRKFNARRKLKGAILTTMLVSRNF 333

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score =  214 bits (545), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 146/515 (28%), Positives = 257/515 (49%), Gaps = 78/515 (15%)
Query: 8   LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQ 67
            +D Y+   +LG+G F  V     K  G+   V + + R++                   
Sbjct: 24  FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQV------------------- 64
Query: 68  IGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGG 127
                  KQ +  ++LL  E+ +++++      HPN++ LY+ +ED+   +L+ E+ +GG
Sbjct: 65  -------KQKTDKESLL-REVQLLKQL-----DHPNIMKLYEFFEDKGYFYLVGEVYTGG 111
Query: 128 ELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIM 187
           ELFD I++++R+ EV AA +IRQ+  G+  +H+  IVHRDLKPEN L  +  +D+ ++I+
Sbjct: 112 ELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRII 171
Query: 188 DFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQ 247
           DFGLS+    +  +    G+  Y++PE +L      K D+WS GVILYILLSG PPF   
Sbjct: 172 DFGLSTHFEASKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFNGA 230
Query: 248 SNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSA 307
           +     + +  G+++F    WK +S SAK LI  +LT  P+ R SA++ L+H W+   + 
Sbjct: 231 NEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWI--QTY 288
Query: 308 KEEEMDAEIVS------RLQSFNARRKLRAAAIASVLSSTIFLRRTKKLKNLLGSHDLNE 361
            +E++  ++ S       ++ F   +KL  AA+                   +GS   ++
Sbjct: 289 TKEQISVDVPSLDNAILNIRQFQGTQKLAQAALL-----------------YMGSKLTSQ 331
Query: 362 EEIQNLRIHFRTICANGDN----ATLSE-FEEVLK-------AMNMSSLVPLAPRIFDLF 409
           +E + L   F  +  NGD     A L E ++E+++        ++ S++     ++ D  
Sbjct: 332 DETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAV 391
Query: 410 DNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDC 469
           D +++G ++  E +      +     + L   F+M+D D SG I+  E+A++        
Sbjct: 392 DFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATI-------- 443
Query: 470 LPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAM 504
             V   +      +   +D NNDG+V FDEF+  +
Sbjct: 444 FGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQML 478

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score =  214 bits (545), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 111/283 (39%), Positives = 170/283 (60%), Gaps = 12/283 (4%)
Query: 74  RKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRI 133
           +K +   ++ + NEI V+RKI      H N++ L D+YE  N ++L+++L SGGELFDRI
Sbjct: 57  KKALKGKESSIENEIAVLRKI-----KHENIVALEDIYESPNHLYLVMQLVSGGELFDRI 111
Query: 134 VAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS 193
           V +  Y E  A+ +IRQ+ + +  LH+  IVHRDLKPEN L+ +  E+S + I DFGLS 
Sbjct: 112 VEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSK 171
Query: 194 VEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQ 253
           +EG  D +    G+  YV+PE L Q   +   D WS+GVI YILL GYPPF  +++ +  
Sbjct: 172 MEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLF 231
Query: 254 QMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAKEEEMD 313
           + I+  E+ F    W +IS SAK  I +L+  DPN+R + ++   HPW+ GD+A  + + 
Sbjct: 232 EQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPNKRYTCEQAARHPWIAGDTALNKNIH 291
Query: 314 AEIVSRLQSFNARRKLRAAAIASVLSSTIFLRRTKKLKNLLGS 356
             + ++++   A+ K R A      ++T  +R  +KL   LGS
Sbjct: 292 ESVSAQIRKNFAKSKWRQA-----FNATAVVRHMRKLH--LGS 327

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score =  214 bits (545), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 146/515 (28%), Positives = 257/515 (49%), Gaps = 78/515 (15%)
Query: 8   LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQ 67
            +D Y+   +LG+G F  V     K  G+   V + + R++                   
Sbjct: 47  FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQV------------------- 87
Query: 68  IGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGG 127
                  KQ +  ++LL  E+ +++++      HPN++ LY+ +ED+   +L+ E+ +GG
Sbjct: 88  -------KQKTDKESLL-REVQLLKQL-----DHPNIMKLYEFFEDKGYFYLVGEVYTGG 134
Query: 128 ELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIM 187
           ELFD I++++R+ EV AA +IRQ+  G+  +H+  IVHRDLKPEN L  +  +D+ ++I+
Sbjct: 135 ELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRII 194
Query: 188 DFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQ 247
           DFGLS+    +  +    G+  Y++PE +L      K D+WS GVILYILLSG PPF   
Sbjct: 195 DFGLSTHFEASKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFNGA 253
Query: 248 SNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSA 307
           +     + +  G+++F    WK +S SAK LI  +LT  P+ R SA++ L+H W+   + 
Sbjct: 254 NEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWI--QTY 311
Query: 308 KEEEMDAEIVS------RLQSFNARRKLRAAAIASVLSSTIFLRRTKKLKNLLGSHDLNE 361
            +E++  ++ S       ++ F   +KL  AA+                   +GS   ++
Sbjct: 312 TKEQISVDVPSLDNAILNIRQFQGTQKLAQAALL-----------------YMGSKLTSQ 354
Query: 362 EEIQNLRIHFRTICANGDN----ATLSE-FEEVLK-------AMNMSSLVPLAPRIFDLF 409
           +E + L   F  +  NGD     A L E ++E+++        ++ S++     ++ D  
Sbjct: 355 DETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAV 414
Query: 410 DNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDC 469
           D +++G ++  E +      +     + L   F+M+D D SG I+  E+A++        
Sbjct: 415 DFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATI-------- 466
Query: 470 LPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAM 504
             V   +      +   +D NNDG+V FDEF+  +
Sbjct: 467 FGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQML 501

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score =  214 bits (544), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 146/515 (28%), Positives = 257/515 (49%), Gaps = 78/515 (15%)
Query: 8   LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQ 67
            +D Y+   +LG+G F  V     K  G+   V + + R++                   
Sbjct: 48  FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQV------------------- 88
Query: 68  IGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGG 127
                  KQ +  ++LL  E+ +++++      HPN++ LY+ +ED+   +L+ E+ +GG
Sbjct: 89  -------KQKTDKESLL-REVQLLKQL-----DHPNIMKLYEFFEDKGYFYLVGEVYTGG 135
Query: 128 ELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIM 187
           ELFD I++++R+ EV AA +IRQ+  G+  +H+  IVHRDLKPEN L  +  +D+ ++I+
Sbjct: 136 ELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRII 195
Query: 188 DFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQ 247
           DFGLS+    +  +    G+  Y++PE +L      K D+WS GVILYILLSG PPF   
Sbjct: 196 DFGLSTHFEASKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFNGA 254
Query: 248 SNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSA 307
           +     + +  G+++F    WK +S SAK LI  +LT  P+ R SA++ L+H W+   + 
Sbjct: 255 NEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWI--QTY 312
Query: 308 KEEEMDAEIVS------RLQSFNARRKLRAAAIASVLSSTIFLRRTKKLKNLLGSHDLNE 361
            +E++  ++ S       ++ F   +KL  AA+                   +GS   ++
Sbjct: 313 TKEQISVDVPSLDNAILNIRQFQGTQKLAQAALL-----------------YMGSKLTSQ 355
Query: 362 EEIQNLRIHFRTICANGDN----ATLSE-FEEVLK-------AMNMSSLVPLAPRIFDLF 409
           +E + L   F  +  NGD     A L E ++E+++        ++ S++     ++ D  
Sbjct: 356 DETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAV 415
Query: 410 DNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDC 469
           D +++G ++  E +      +     + L   F+M+D D SG I+  E+A++        
Sbjct: 416 DFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATI-------- 467
Query: 470 LPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAM 504
             V   +      +   +D NNDG+V FDEF+  +
Sbjct: 468 FGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQML 502

>pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444

Iteration: 1
 Score =  211 bits (538), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 122/346 (35%), Positives = 182/346 (52%), Gaps = 35/346 (10%)
Query: 7   KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXX 66
           + T+EY++ + LG+G FSVVRR +K   G+     I                        
Sbjct: 8   RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMI------------------------ 43
Query: 67  QIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSG 126
                 T+K  +     L  E  + R +      HPN++ L+D   ++   +LI +L +G
Sbjct: 44  ----INTKKLSARDHQKLEREARICRLL-----KHPNIVRLHDSISEEGHHYLIFDLVTG 94
Query: 127 GELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKI 186
           GELF+ IVA+E Y E  A+  I+QI E +   HQ  +VHR+LKPEN L  +  + + +K+
Sbjct: 95  GELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKL 154
Query: 187 MDFGLS-SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFI 245
            DFGL+  VEG      G  G+  Y+SPE L +D      D+W+ GVILYILL GYPPF 
Sbjct: 155 ADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFW 214
Query: 246 AQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGD 305
            +   +  Q I AG + F    W  ++  AK LI+ +LT++P++R +A E L HPW+   
Sbjct: 215 DEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISHR 274
Query: 306 SAKEEEMD-AEIVSRLQSFNARRKLRAAAIASVLSSTIFLRRTKKL 350
           S     M   E V  L+ FNARRKL+ A +  +L++  F  R +++
Sbjct: 275 STVASCMHRQETVDCLKKFNARRKLKGAILTVMLATRNFSVRKQEI 320

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score =  211 bits (537), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 123/338 (36%), Positives = 180/338 (53%), Gaps = 35/338 (10%)
Query: 8   LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQ 67
           +TDEY++ + LG+G FSVVRR +K   G+  + A K +                      
Sbjct: 2   MTDEYQLFEELGKGAFSVVRRCMKIPTGQ--EYAAKIIN--------------------- 38
Query: 68  IGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGG 127
                T+K  +     L  E  + R +      HPN++ L+D   ++   +L+ +L +GG
Sbjct: 39  -----TKKLSARDHQKLEREARICRLL-----KHPNIVRLHDSISEEGFHYLVFDLVTGG 88
Query: 128 ELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIM 187
           ELF+ IVA+E Y E  A+  I+QI E +   H   IVHRDLKPEN L  +  + + +K+ 
Sbjct: 89  ELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLA 148
Query: 188 DFGLS-SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIA 246
           DFGL+  V+G      G  G+  Y+SPE L +D      DMW+ GVILYILL GYPPF  
Sbjct: 149 DFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWD 208
Query: 247 QSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDS 306
           +   +  Q I AG + F    W  ++  AK LI+ +LT++P +R +A E L HPW+   S
Sbjct: 209 EDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPWICQRS 268
Query: 307 AKEEEMD-AEIVSRLQSFNARRKLRAAAIASVLSSTIF 343
                M   E V  L+ FNARRKL+ A + ++L++  F
Sbjct: 269 TVASMMHRQETVDCLKKFNARRKLKGAILTTMLATRNF 306

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score =  209 bits (531), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 122/333 (36%), Positives = 177/333 (53%), Gaps = 35/333 (10%)
Query: 8   LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQ 67
           +TDEY++ + LG+G FSVVRR +K   G+  + A K +                      
Sbjct: 2   MTDEYQLFEELGKGAFSVVRRCMKIPTGQ--EYAAKIIN--------------------- 38
Query: 68  IGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGG 127
                T+K  +     L  E  + R +      HPN++ L+D   ++   +L+ +L +GG
Sbjct: 39  -----TKKLSARDHQKLEREARICRLL-----KHPNIVRLHDSISEEGFHYLVFDLVTGG 88
Query: 128 ELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIM 187
           ELF+ IVA+E Y E  A+  I+QI E +   H   IVHRDLKPEN L  +  + + +K+ 
Sbjct: 89  ELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLA 148
Query: 188 DFGLS-SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIA 246
           DFGL+  V+G      G  G+  Y+SPE L +D      DMW+ GVILYILL GYPPF  
Sbjct: 149 DFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWD 208
Query: 247 QSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDS 306
           +   +  Q I AG + F    W  ++  AK LI+ +LT++P +R +A E L HPW+   S
Sbjct: 209 EDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPWICQRS 268
Query: 307 AKEEEMD-AEIVSRLQSFNARRKLRAAAIASVL 338
                M   E V  L+ FNARRKL+ A + ++L
Sbjct: 269 TVASMMHRQETVDCLKKFNARRKLKGAILTTML 301

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score =  208 bits (530), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 129/415 (31%), Positives = 221/415 (53%), Gaps = 24/415 (5%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HPN++ L+++ ED +  +++ EL +GGELFD I+ ++R+ E  AA +I+Q+  G+  +H+
Sbjct: 80  HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHK 139
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDR 220
            NIVHRDLKPEN L  +  +D  +KI+DFGLS+       +    G+  Y++PE +L+  
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPE-VLRGT 198
Query: 221 ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLIS 280
              K D+WS GVILYILLSG PPF  ++     + +  G+++F    W+ IS  AK LI 
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIR 258
Query: 281 SLLTVDPNRRPSAQELLNHPWVIGDSAKEEEMD-----AEIVSRLQSFNARRKLRAAAIA 335
            +LT  P+ R +A + L HPW+   S++   +         ++ ++ F A +KL  AA+ 
Sbjct: 259 KMLTFHPSLRITATQCLEHPWIQKYSSETPTISDLPSLESAMTNIRQFQAEKKLAQAALL 318
Query: 336 SVLSSTIFLRRTKKLKNLLGSHDLNEEEIQN----LRIHFRTICANG-DNATLSEFEEVL 390
            + S    L  TK+L  +    D N + + +    +R +   +   G D+ +L + E   
Sbjct: 319 YMASKLTTLDETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGST 378
Query: 391 KAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRS 450
               + SL+P       L D +  G+++  E +            + +   F+M+D D S
Sbjct: 379 IEDQIDSLMP-------LLDMDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGS 431
Query: 451 GCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQ 505
           G I+ +E+  +  +  D  + ++     +L+ I + +D N DG+V F+EF   +Q
Sbjct: 432 GKISTKELFKLF-SQADSSIQME-----ELESIIEQVDNNKDGEVDFNEFVEMLQ 480

>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349

Iteration: 1
 Score =  207 bits (527), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 126/342 (36%), Positives = 179/342 (52%), Gaps = 39/342 (11%)
Query: 2   GQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXX 61
           G     L+D +EV   LGRG  S+V R  +K  G     A+K L++              
Sbjct: 45  GSNRDALSDFFEVESELGRGATSIVYRCKQK--GTQKPYALKVLKK-------------- 88
Query: 62  XXXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLIL 121
                           +V   ++  EI V+ ++      HPN+I L +++E    + L+L
Sbjct: 89  ----------------TVDKKIVRTEIGVLLRL-----SHPNIIKLKEIFETPTEISLVL 127
Query: 122 ELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRED 181
           EL +GGELFDRIV +  Y E  AA  ++QI E +A LH+  IVHRDLKPEN L+     D
Sbjct: 128 ELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPD 187
Query: 182 SPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGY 241
           +PLKI DFGLS +  +   +  + G+  Y +PE L       + DMWS+G+I YILL G+
Sbjct: 188 APLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGF 247
Query: 242 PPFIAQSNRQKQ-QMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHP 300
            PF  +   Q   + I+  E+ F    W  +S +AK L+  L+ +DP +R +  + L HP
Sbjct: 248 EPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHP 307
Query: 301 WVIGDSAKEEEMDAEIVSRLQSFNARRKLRAAAIASVLSSTI 342
           WV G +A    MD     +LQ FNARRKL+AA  A V SS +
Sbjct: 308 WVTGKAANFVHMDTA-QKKLQEFNARRKLKAAVKAVVASSRL 348

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score =  206 bits (523), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 145/515 (28%), Positives = 249/515 (48%), Gaps = 78/515 (15%)
Query: 8   LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQ 67
            +D Y+   +LG+G F  V     K  G+   V + + R++                   
Sbjct: 24  FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQV------------------- 64
Query: 68  IGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGG 127
                  KQ +  ++LL  E+ +++++      HPN+  LY+ +ED+   +L+ E+ +GG
Sbjct: 65  -------KQKTDKESLL-REVQLLKQL-----DHPNIXKLYEFFEDKGYFYLVGEVYTGG 111
Query: 128 ELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIM 187
           ELFD I++++R+ EV AA +IRQ+  G+   H+  IVHRDLKPEN L  +  +D+ ++I+
Sbjct: 112 ELFDEIISRKRFSEVDAARIIRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRII 171
Query: 188 DFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQ 247
           DFGLS+    +       G+  Y++PE +L      K D+WS GVILYILLSG PPF   
Sbjct: 172 DFGLSTHFEASKKXKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFNGA 230
Query: 248 SNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSA 307
           +     + +  G+++F    WK +S SAK LI   LT  P+ R SA++ L+H W+   + 
Sbjct: 231 NEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKXLTYVPSXRISARDALDHEWI--QTY 288
Query: 308 KEEEMDAEIVS------RLQSFNARRKLRAAAIASVLSSTIFLRRTKKLKNLLGSHDLNE 361
            +E++  ++ S       ++ F   +KL  AA+                    GS   ++
Sbjct: 289 TKEQISVDVPSLDNAILNIRQFQGTQKLAQAALL-----------------YXGSKLTSQ 331
Query: 362 EEIQNLRIHFRTICANGDN----ATLSE-FEEVLK-------AMNMSSLVPLAPRIFDLF 409
           +E + L   F     NGD     A L E ++E+ +        ++ S++     ++ D  
Sbjct: 332 DETKELTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXLDASAVEHEVDQVLDAV 391
Query: 410 DNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDC 469
           D +++G ++  E +      +     + L   F+ +D D SG I+  E+A++        
Sbjct: 392 DFDKNGYIEYSEFVTVAXDRKTLLSRERLERAFRXFDSDNSGKISSTELATI-------- 443
Query: 470 LPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAM 504
             V   +      +   +D NNDG+V FDEF+  +
Sbjct: 444 FGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQXL 478

>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313

Iteration: 1
 Score =  206 bits (523), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 121/334 (36%), Positives = 174/334 (52%), Gaps = 35/334 (10%)
Query: 1   MGQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXX 60
           +G E       Y++ + LG+G FSVVRR +K   G+  + A K +               
Sbjct: 13  LGTENLYFQSMYQLFEELGKGAFSVVRRCVKVLAGQ--EYAAKIIN-------------- 56
Query: 61  XXXXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLI 120
                       T+K  +     L  E  + R +      HPN++ L+D   ++   +LI
Sbjct: 57  ------------TKKLSARDHQKLEREARICRLL-----KHPNIVRLHDSISEEGHHYLI 99
Query: 121 LELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRE 180
            +L +GGELF+ IVA+E Y E  A+  I+QI E +   HQ  +VHRDLKPEN L  +  +
Sbjct: 100 FDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKLK 159
Query: 181 DSPLKIMDFGLS-SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS 239
            + +K+ DFGL+  VEG      G  G+  Y+SPE L +D      D+W+ GVILYILL 
Sbjct: 160 GAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLV 219
Query: 240 GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH 299
           GYPPF  +   +  Q I AG + F    W  ++  AK LI+ +LT++P++R +A E L H
Sbjct: 220 GYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKH 279
Query: 300 PWVIGDSAKEEEMD-AEIVSRLQSFNARRKLRAA 332
           PW+   S     M   E V  L+ FNARRKL+ A
Sbjct: 280 PWISHRSTVASCMHRQETVDCLKKFNARRKLKGA 313

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score =  204 bits (519), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 118/327 (36%), Positives = 173/327 (52%), Gaps = 35/327 (10%)
Query: 8   LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQ 67
           +TDEY++ + +G+G FSVVRR +K   G  ++ A K +                      
Sbjct: 2   MTDEYQLYEDIGKGAFSVVRRCVKLCTG--HEYAAKIIN--------------------- 38
Query: 68  IGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGG 127
                T+K  +     L  E  + R +      H N++ L+D   ++   +L+ +L +GG
Sbjct: 39  -----TKKLSARDHQKLEREARICRLL-----KHSNIVRLHDSISEEGFHYLVFDLVTGG 88
Query: 128 ELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIM 187
           ELF+ IVA+E Y E  A+  I+QI E +   HQ  +VHRDLKPEN L  +  + + +K+ 
Sbjct: 89  ELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLA 148
Query: 188 DFGLS-SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIA 246
           DFGL+  V+G      G  G+  Y+SPE L ++      D+W+ GVILYILL GYPPF  
Sbjct: 149 DFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWD 208
Query: 247 QSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDS 306
           +   +  Q I AG + F    W  ++  AK LI+ +LT++P +R +A E L HPWV   S
Sbjct: 209 EDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRITAHEALKHPWVCQRS 268
Query: 307 AKEEEMD-AEIVSRLQSFNARRKLRAA 332
                M   E V  L+ FNARRKL+ A
Sbjct: 269 TVASMMHRQETVECLKKFNARRKLKGA 295

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score =  203 bits (516), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 125/365 (34%), Positives = 195/365 (53%), Gaps = 44/365 (12%)
Query: 1   MGQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXX 60
           M   + K +D Y+V + LG+G FSVVRR + KT G      ++   +I +T         
Sbjct: 20  MMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTG------LEFAAKIINT--------- 64
Query: 61  XXXXXXQIGFFPTRKQVSVSD-ALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHL 119
                         K++S  D   L  E  + RK+      HPN++ L+D  ++++  +L
Sbjct: 65  --------------KKLSARDFQKLEREARICRKL-----QHPNIVRLHDSIQEESFHYL 105
Query: 120 ILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDR 179
           + +L +GGELF+ IVA+E Y E  A+  I+QI E +A  H   IVHR+LKPEN L  +  
Sbjct: 106 VFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKA 165
Query: 180 EDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS 239
           + + +K+ DFGL+     ++   G  G+  Y+SPE L +D  +   D+W+ GVILYILL 
Sbjct: 166 KGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLV 225
Query: 240 GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH 299
           GYPPF  +   +    I AG + +    W  ++  AK LI S+LTV+P +R +A + L  
Sbjct: 226 GYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285
Query: 300 PWVIGDSAKEEEMD-AEIVSRLQSFNARRKLRAAAIASVLSSTIFLRRTKKLKNLLGSHD 358
           PW+         +   + V  L+ FNARRKL+ A + ++++       T+ L N LG + 
Sbjct: 286 PWICNRERVASAIHRQDTVDCLKKFNARRKLKGAILTTMIA-------TRNLSN-LGRNL 337
Query: 359 LNEEE 363
           LN++E
Sbjct: 338 LNKKE 342

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score =  203 bits (516), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 120/350 (34%), Positives = 184/350 (52%), Gaps = 41/350 (11%)
Query: 3   QETRKLTDEYEVTDILGRGGFS-VVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXX 61
           ++   + D Y+  D+LG G FS V+    K+T      VAIK +                
Sbjct: 11  KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRT---QKLVAIKCI---------------- 51
Query: 62  XXXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLIL 121
                       +K +   +  + NEI V+ KI      HPN++ L D+YE    ++LI+
Sbjct: 52  -----------AKKALEGKEGSMENEIAVLHKI-----KHPNIVALDDIYESGGHLYLIM 95
Query: 122 ELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRED 181
           +L SGGELFDRIV +  Y E  A+ +I Q+ + +  LH   IVHRDLKPEN L+ +  ED
Sbjct: 96  QLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDED 155
Query: 182 SPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGY 241
           S + I DFGLS +E     +    G+  YV+PE L Q   +   D WS+GVI YILL GY
Sbjct: 156 SKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGY 215
Query: 242 PPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPW 301
           PPF  +++ +  + I+  E+ F    W +IS SAK  I  L+  DP +R + ++ L HPW
Sbjct: 216 PPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPW 275
Query: 302 VIGDSAKEEEMDAEIVSRLQSFNARRKLRAAAIASVLSSTIFLRRTKKLK 351
           + GD+A ++ +   +  +++   A+ K + A      ++T  +R  +KL+
Sbjct: 276 IAGDTALDKNIHQSVSEQIKKNFAKSKWKQA-----FNATAVVRHMRKLQ 320

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score =  201 bits (511), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 110/296 (37%), Positives = 171/296 (57%), Gaps = 33/296 (11%)
Query: 8   LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQ 67
           L+D Y+    LG G +  V     K  G   + AIK +++   TT               
Sbjct: 19  LSDRYQRVKKLGSGAYGEVLLCKDKLTGA--ERAIKIIKKSSVTT--------------- 61
Query: 68  IGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGG 127
                     S S ALL +E+ V++++      HPN++ LY+ +ED+   +L++E+  GG
Sbjct: 62  ---------TSNSGALL-DEVAVLKQL-----DHPNIMKLYEFFEDKRNYYLVMEVYRGG 106
Query: 128 ELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIM 187
           ELFD I+ ++++ EV AA +++Q+  G   LH+ NIVHRDLKPEN L  +   D+ +KI+
Sbjct: 107 ELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIV 166
Query: 188 DFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQ 247
           DFGLS+       +    G+  Y++PE +L+ +   K D+WS GVILYILL GYPPF  Q
Sbjct: 167 DFGLSAHFEVGGKMKERLGTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCGYPPFGGQ 225
Query: 248 SNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVI 303
           ++++  + +  G+FSF    W  +S  AKQL+  +LT +P++R SA+E LNHPW++
Sbjct: 226 TDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRISAEEALNHPWIV 281

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score =  201 bits (511), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 119/350 (34%), Positives = 184/350 (52%), Gaps = 41/350 (11%)
Query: 3   QETRKLTDEYEVTDILGRGGFS-VVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXX 61
           ++   + D Y+  D+LG G FS V+    K+T      VAIK +                
Sbjct: 11  KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRT---QKLVAIKCI---------------- 51
Query: 62  XXXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLIL 121
                       ++ +   +  + NEI V+ KI      HPN++ L D+YE    ++LI+
Sbjct: 52  -----------AKEALEGKEGSMENEIAVLHKI-----KHPNIVALDDIYESGGHLYLIM 95
Query: 122 ELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRED 181
           +L SGGELFDRIV +  Y E  A+ +I Q+ + +  LH   IVHRDLKPEN L+ +  ED
Sbjct: 96  QLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDED 155
Query: 182 SPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGY 241
           S + I DFGLS +E     +    G+  YV+PE L Q   +   D WS+GVI YILL GY
Sbjct: 156 SKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGY 215
Query: 242 PPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPW 301
           PPF  +++ +  + I+  E+ F    W +IS SAK  I  L+  DP +R + ++ L HPW
Sbjct: 216 PPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPW 275
Query: 302 VIGDSAKEEEMDAEIVSRLQSFNARRKLRAAAIASVLSSTIFLRRTKKLK 351
           + GD+A ++ +   +  +++   A+ K + A      ++T  +R  +KL+
Sbjct: 276 IAGDTALDKNIHQSVSEQIKKNFAKSKWKQA-----FNATAVVRHMRKLQ 320

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score =  199 bits (505), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 116/337 (34%), Positives = 178/337 (52%), Gaps = 36/337 (10%)
Query: 3   QETRKLTDEYEVTDILGRGGFS-VVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXX 61
           ++   + D Y+  D+LG G FS V+    K+T      VAIK +                
Sbjct: 11  KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRT---QKLVAIKCI---------------- 51
Query: 62  XXXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLIL 121
                       ++ +   +  + NEI V+ KI      HPN++ L D+YE    ++LI+
Sbjct: 52  -----------AKEALEGKEGSMENEIAVLHKI-----KHPNIVALDDIYESGGHLYLIM 95
Query: 122 ELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRED 181
           +L SGGELFDRIV +  Y E  A+ +I Q+ + +  LH   IVHRDLKPEN L+ +  ED
Sbjct: 96  QLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDED 155
Query: 182 SPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGY 241
           S + I DFGLS +E     +    G+  YV+PE L Q   +   D WS+GVI YILL GY
Sbjct: 156 SKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGY 215
Query: 242 PPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPW 301
           PPF  +++ +  + I+  E+ F    W +IS SAK  I  L+  DP +R + ++ L HPW
Sbjct: 216 PPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPW 275
Query: 302 VIGDSAKEEEMDAEIVSRLQSFNARRKLRAAAIASVL 338
           + GD+A ++ +   +  +++   A+ K + A  A+ +
Sbjct: 276 IAGDTALDKNIHQSVSEQIKKNFAKSKWKQAFNATAV 312

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score =  194 bits (493), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 112/306 (36%), Positives = 163/306 (53%), Gaps = 36/306 (11%)
Query: 3   QETRKLTDEYEVTDILGRGGFS-VVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXX 61
           ++   + D Y+  D+LG G FS V+    K+T      VAIK +                
Sbjct: 11  KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRT---QKLVAIKCI---------------- 51
Query: 62  XXXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLIL 121
                       ++ +   +  + NEI V+ KI      HPN++ L D+YE    ++LI+
Sbjct: 52  -----------AKEALEGKEGSMENEIAVLHKI-----KHPNIVALDDIYESGGHLYLIM 95
Query: 122 ELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRED 181
           +L SGGELFDRIV +  Y E  A+ +I Q+ + +  LH   IVHRDLKPEN L+ +  ED
Sbjct: 96  QLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDED 155
Query: 182 SPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGY 241
           S + I DFGLS +E     +    G+  YV+PE L Q   +   D WS+GVI YILL GY
Sbjct: 156 SKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGY 215
Query: 242 PPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPW 301
           PPF  +++ +  + I+  E+ F    W +IS SAK  I  L+  DP +R + ++ L HPW
Sbjct: 216 PPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPW 275
Query: 302 VIGDSA 307
           + GD+A
Sbjct: 276 IAGDTA 281

>pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284

Iteration: 1
 Score =  187 bits (474), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 106/299 (35%), Positives = 163/299 (54%), Gaps = 35/299 (11%)
Query: 5   TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXX 64
           + K +D Y+V + LG+G FSVVRR + KT G      ++   +I +T             
Sbjct: 1   STKFSDNYDVKEELGKGAFSVVRRCVHKTTG------LEFAAKIINT------------- 41
Query: 65  XXQIGFFPTRKQVSVSD-ALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILEL 123
                     K++S  D   L  E  + RK+      HPN++ L+D  ++++  +L+ +L
Sbjct: 42  ----------KKLSARDFQKLEREARICRKL-----QHPNIVRLHDSIQEESFHYLVFDL 86
Query: 124 CSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSP 183
            +GGELF+ IVA+E Y E  A+  I+QI E +A  H   IVHR+LKPEN L  +  + + 
Sbjct: 87  VTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAA 146
Query: 184 LKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPP 243
           +K+ DFGL+     ++   G  G+  Y+SPE L +D  +   D+W+ GVILYILL GYPP
Sbjct: 147 VKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
Query: 244 FIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
           F  +   +    I AG + +    W  ++  AK LI S+LTV+P +R +A + L  PW+
Sbjct: 207 FWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 265

>pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282

Iteration: 1
 Score =  186 bits (473), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 106/297 (35%), Positives = 162/297 (54%), Gaps = 35/297 (11%)
Query: 7   KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXX 66
           K +D Y+V + LG+G FSVVRR + KT G      ++   +I +T               
Sbjct: 2   KFSDNYDVKEELGKGAFSVVRRCVHKTTG------LEFAAKIINT--------------- 40
Query: 67  QIGFFPTRKQVSVSD-ALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCS 125
                   K++S  D   L  E  + RK+      HPN++ L+D  ++++  +L+ +L +
Sbjct: 41  --------KKLSARDFQKLEREARICRKL-----QHPNIVRLHDSIQEESFHYLVFDLVT 87
Query: 126 GGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLK 185
           GGELF+ IVA+E Y E  A+  I+QI E +A  H   IVHR+LKPEN L  +  + + +K
Sbjct: 88  GGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVK 147
Query: 186 IMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFI 245
           + DFGL+     ++   G  G+  Y+SPE L +D  +   D+W+ GVILYILL GYPPF 
Sbjct: 148 LADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFW 207
Query: 246 AQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
            +   +    I AG + +    W  ++  AK LI S+LTV+P +R +A + L  PW+
Sbjct: 208 DEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 264

>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269

Iteration: 1
 Score =  186 bits (473), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 106/299 (35%), Positives = 163/299 (54%), Gaps = 35/299 (11%)
Query: 5   TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXX 64
           + K +D Y+V + LG+G FSVVRR + KT G      ++   +I +T             
Sbjct: 1   STKFSDNYDVKEELGKGAFSVVRRCVHKTTG------LEFAAKIINT------------- 41
Query: 65  XXQIGFFPTRKQVSVSD-ALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILEL 123
                     K++S  D   L  E  + RK+      HPN++ L+D  ++++  +L+ +L
Sbjct: 42  ----------KKLSARDFQKLEREARICRKL-----QHPNIVRLHDSIQEESFHYLVFDL 86
Query: 124 CSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSP 183
            +GGELF+ IVA+E Y E  A+  I+QI E +A  H   IVHR+LKPEN L  +  + + 
Sbjct: 87  VTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAA 146
Query: 184 LKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPP 243
           +K+ DFGL+     ++   G  G+  Y+SPE L +D  +   D+W+ GVILYILL GYPP
Sbjct: 147 VKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
Query: 244 FIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
           F  +   +    I AG + +    W  ++  AK LI S+LTV+P +R +A + L  PW+
Sbjct: 207 FWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 265

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score =  181 bits (460), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 101/295 (34%), Positives = 165/295 (55%), Gaps = 33/295 (11%)
Query: 8   LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQ 67
            +D Y+   +LG+G F  V     K  G+   V + + R++                   
Sbjct: 30  FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQV------------------- 70
Query: 68  IGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGG 127
                  KQ +  ++LL  E+ +++++      HPN++ LY+ +ED+   +L+ E+ +GG
Sbjct: 71  -------KQKTDKESLL-REVQLLKQL-----DHPNIMKLYEFFEDKGYFYLVGEVYTGG 117
Query: 128 ELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIM 187
           ELFD I++++R+ EV AA +IRQ+  G+  +H+  IVHRDLKPEN L  +  +D+ ++I+
Sbjct: 118 ELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRII 177
Query: 188 DFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQ 247
           DFGLS+    +  +    G+  Y++PE +L      K D+WS GVILYILLSG PPF   
Sbjct: 178 DFGLSTHFEASKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFNGA 236
Query: 248 SNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
           +     + +  G+++F    WK +S SAK LI  +LT  P+ R SA++ L+H W+
Sbjct: 237 NEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWI 291

>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277

Iteration: 1
 Score =  181 bits (458), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 85/201 (42%), Positives = 128/201 (63%), Gaps = 1/201 (0%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HPN+I LY+ +ED   ++L++ELC+GGELF+R+V +  + E  AA +++ +   +A  H+
Sbjct: 65  HPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHK 124
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDR 220
            N+ HRDLKPEN LFL D  DSPLK++DFGL++       +    G+  YVSP+ +L+  
Sbjct: 125 LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQ-VLEGL 183
Query: 221 ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLIS 280
              + D WS GV++Y+LL GYPPF A ++ +    I  G F+F E+ W N+S  A+ LI 
Sbjct: 184 YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESLIR 243
Query: 281 SLLTVDPNRRPSAQELLNHPW 301
            LLT  P +R ++ + L H W
Sbjct: 244 RLLTKSPKQRITSLQALEHEW 264

>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294

Iteration: 1
 Score =  181 bits (458), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 85/201 (42%), Positives = 128/201 (63%), Gaps = 1/201 (0%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HPN+I LY+ +ED   ++L++ELC+GGELF+R+V +  + E  AA +++ +   +A  H+
Sbjct: 82  HPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHK 141
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDR 220
            N+ HRDLKPEN LFL D  DSPLK++DFGL++       +    G+  YVSP+ +L+  
Sbjct: 142 LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQ-VLEGL 200
Query: 221 ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLIS 280
              + D WS GV++Y+LL GYPPF A ++ +    I  G F+F E+ W N+S  A+ LI 
Sbjct: 201 YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESLIR 260
Query: 281 SLLTVDPNRRPSAQELLNHPW 301
            LLT  P +R ++ + L H W
Sbjct: 261 RLLTKSPKQRITSLQALEHEW 281

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score =  179 bits (455), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 85/209 (40%), Positives = 132/209 (63%), Gaps = 1/209 (0%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HPN++ L+++ ED +  +++ EL +GGELFD I+ ++R+ E  AA +I+Q+  G+  +H+
Sbjct: 80  HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHK 139
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDR 220
            NIVHRDLKPEN L  +  +D  +KI+DFGLS+       +    G+  Y++PE +L+  
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPE-VLRGT 198
Query: 221 ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLIS 280
              K D+WS GVILYILLSG PPF  ++     + +  G+++F    W+ IS  AK LI 
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIR 258
Query: 281 SLLTVDPNRRPSAQELLNHPWVIGDSAKE 309
            +LT  P+ R +A + L HPW+   S++E
Sbjct: 259 KMLTFHPSLRITATQCLEHPWIQKYSSEE 287

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score =  178 bits (451), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 83/202 (41%), Positives = 128/202 (63%), Gaps = 1/202 (0%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HPN++ L+++ ED +  +++ EL +GGELFD I+ ++R+ E  AA +I+Q+  G+  +H+
Sbjct: 80  HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHK 139
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDR 220
            NIVHRDLKPEN L  +  +D  +KI+DFGLS+       +    G+  Y++PE +L+  
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPE-VLRGT 198
Query: 221 ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLIS 280
              K D+WS GVILYILLSG PPF  ++     + +  G+++F    W+ IS  AK LI 
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIR 258
Query: 281 SLLTVDPNRRPSAQELLNHPWV 302
            +LT  P+ R +A + L HPW+
Sbjct: 259 KMLTFHPSLRITATQCLEHPWI 280

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score =  174 bits (442), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 101/294 (34%), Positives = 158/294 (53%), Gaps = 30/294 (10%)
Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIG 69
           D Y+  + LG G F+VV++  +K+ G          RR  S+                  
Sbjct: 11  DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSS------------------ 52
Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
               R+ VS  D  +  E+ ++++I      HPNVI L++VYE++  V LILEL +GGEL
Sbjct: 53  ----RRGVSRED--IEREVSILKEI-----QHPNVITLHEVYENKTDVILILELVAGGEL 101
Query: 130 FDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSP-LKIMD 188
           FD +  +E   E  A   ++QI  G+  LH   I H DLKPEN + L+     P +KI+D
Sbjct: 102 FDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 189 FGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQS 248
           FGL+    + +    +FG+ ++V+PE +  + +  ++DMWS+GVI YILLSG  PF+  +
Sbjct: 162 FGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT 221
Query: 249 NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
            ++    + A  + F ++ + N S+ AK  I  LL  DP +R + Q+ L HPW+
Sbjct: 222 KQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score =  174 bits (441), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 101/294 (34%), Positives = 158/294 (53%), Gaps = 30/294 (10%)
Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIG 69
           D Y+  + LG G F+VV++  +K+ G          RR  S+                  
Sbjct: 11  DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSS------------------ 52
Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
               R+ VS  D  +  E+ ++++I      HPNVI L++VYE++  V LILEL +GGEL
Sbjct: 53  ----RRGVSRED--IEREVSILKEI-----QHPNVITLHEVYENKTDVILILELVAGGEL 101
Query: 130 FDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSP-LKIMD 188
           FD +  +E   E  A   ++QI  G+  LH   I H DLKPEN + L+     P +KI+D
Sbjct: 102 FDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 189 FGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQS 248
           FGL+    + +    +FG+ ++V+PE +  + +  ++DMWS+GVI YILLSG  PF+  +
Sbjct: 162 FGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT 221
Query: 249 NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
            ++    + A  + F ++ + N S+ AK  I  LL  DP +R + Q+ L HPW+
Sbjct: 222 KQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score =  174 bits (441), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 101/294 (34%), Positives = 158/294 (53%), Gaps = 30/294 (10%)
Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIG 69
           D Y+  + LG G F+VV++  +K+ G          RR  S+                  
Sbjct: 11  DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSS------------------ 52
Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
               R+ VS  D  +  E+ ++++I      HPNVI L++VYE++  V LILEL +GGEL
Sbjct: 53  ----RRGVSRED--IEREVSILKEI-----QHPNVITLHEVYENKTDVILILELVAGGEL 101
Query: 130 FDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSP-LKIMD 188
           FD +  +E   E  A   ++QI  G+  LH   I H DLKPEN + L+     P +KI+D
Sbjct: 102 FDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 189 FGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQS 248
           FGL+    + +    +FG+ ++V+PE +  + +  ++DMWS+GVI YILLSG  PF+  +
Sbjct: 162 FGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT 221
Query: 249 NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
            ++    + A  + F ++ + N S+ AK  I  LL  DP +R + Q+ L HPW+
Sbjct: 222 KQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score =  174 bits (440), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 101/294 (34%), Positives = 158/294 (53%), Gaps = 30/294 (10%)
Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIG 69
           D Y+  + LG G F+VV++  +K+ G          RR  S+                  
Sbjct: 11  DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSS------------------ 52
Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
               R+ VS  D  +  E+ ++++I      HPNVI L++VYE++  V LILEL +GGEL
Sbjct: 53  ----RRGVSRED--IEREVSILKEI-----QHPNVITLHEVYENKTDVILILELVAGGEL 101
Query: 130 FDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSP-LKIMD 188
           FD +  +E   E  A   ++QI  G+  LH   I H DLKPEN + L+     P +KI+D
Sbjct: 102 FDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 189 FGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQS 248
           FGL+    + +    +FG+ ++V+PE +  + +  ++DMWS+GVI YILLSG  PF+  +
Sbjct: 162 FGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT 221
Query: 249 NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
            ++    + A  + F ++ + N S+ AK  I  LL  DP +R + Q+ L HPW+
Sbjct: 222 KQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score =  174 bits (440), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 101/294 (34%), Positives = 158/294 (53%), Gaps = 30/294 (10%)
Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIG 69
           D Y+  + LG G F+VV++  +K+ G          RR  S+                  
Sbjct: 11  DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSS------------------ 52
Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
               R+ VS  D  +  E+ ++++I      HPNVI L++VYE++  V LILEL +GGEL
Sbjct: 53  ----RRGVSRED--IEREVSILKEI-----QHPNVITLHEVYENKTDVILILELVAGGEL 101
Query: 130 FDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSP-LKIMD 188
           FD +  +E   E  A   ++QI  G+  LH   I H DLKPEN + L+     P +KI+D
Sbjct: 102 FDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 189 FGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQS 248
           FGL+    + +    +FG+ ++V+PE +  + +  ++DMWS+GVI YILLSG  PF+  +
Sbjct: 162 FGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT 221
Query: 249 NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
            ++    + A  + F ++ + N S+ AK  I  LL  DP +R + Q+ L HPW+
Sbjct: 222 KQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score =  174 bits (440), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 101/294 (34%), Positives = 158/294 (53%), Gaps = 30/294 (10%)
Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIG 69
           D Y+  + LG G F+VV++  +K+ G          RR  S+                  
Sbjct: 11  DYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSS------------------ 52
Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
               R+ VS  D  +  E+ ++++I      HPNVI L++VYE++  V LILEL +GGEL
Sbjct: 53  ----RRGVSRED--IEREVSILKEI-----QHPNVITLHEVYENKTDVILILELVAGGEL 101
Query: 130 FDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSP-LKIMD 188
           FD +  +E   E  A   ++QI  G+  LH   I H DLKPEN + L+     P +KI+D
Sbjct: 102 FDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 189 FGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQS 248
           FGL+    + +    +FG+ ++V+PE +  + +  ++DMWS+GVI YILLSG  PF+  +
Sbjct: 162 FGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT 221
Query: 249 NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
            ++    + A  + F ++ + N S+ AK  I  LL  DP +R + Q+ L HPW+
Sbjct: 222 KQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score =  173 bits (439), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 101/294 (34%), Positives = 158/294 (53%), Gaps = 30/294 (10%)
Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIG 69
           D Y+  + LG G F+VV++  +K+ G          RR  S+                  
Sbjct: 10  DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSS------------------ 51
Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
               R+ VS  D  +  E+ ++++I      HPNVI L++VYE++  V LILEL +GGEL
Sbjct: 52  ----RRGVSRED--IEREVSILKEI-----QHPNVITLHEVYENKTDVILILELVAGGEL 100
Query: 130 FDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSP-LKIMD 188
           FD +  +E   E  A   ++QI  G+  LH   I H DLKPEN + L+     P +KI+D
Sbjct: 101 FDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIID 160
Query: 189 FGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQS 248
           FGL+    + +    +FG+ ++V+PE +  + +  ++DMWS+GVI YILLSG  PF+  +
Sbjct: 161 FGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT 220
Query: 249 NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
            ++    + A  + F ++ + N S+ AK  I  LL  DP +R + Q+ L HPW+
Sbjct: 221 KQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 274

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score =  173 bits (439), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 101/294 (34%), Positives = 158/294 (53%), Gaps = 30/294 (10%)
Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIG 69
           D Y+  + LG G F+VV++  +K+ G          RR  S+                  
Sbjct: 11  DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSS------------------ 52
Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
               R+ VS  D  +  E+ ++++I      HPNVI L++VYE++  V LILEL +GGEL
Sbjct: 53  ----RRGVSRED--IEREVSILKEI-----QHPNVITLHEVYENKTDVILILELVAGGEL 101
Query: 130 FDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSP-LKIMD 188
           FD +  +E   E  A   ++QI  G+  LH   I H DLKPEN + L+     P +KI+D
Sbjct: 102 FDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 189 FGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQS 248
           FGL+    + +    +FG+ ++V+PE +  + +  ++DMWS+GVI YILLSG  PF+  +
Sbjct: 162 FGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT 221
Query: 249 NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
            ++    + A  + F ++ + N S+ AK  I  LL  DP +R + Q+ L HPW+
Sbjct: 222 KQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score =  173 bits (439), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 101/294 (34%), Positives = 158/294 (53%), Gaps = 30/294 (10%)
Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIG 69
           D Y+  + LG G F+VV++  +K+ G          RR  S+                  
Sbjct: 10  DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSS------------------ 51
Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
               R+ VS  D  +  E+ ++++I      HPNVI L++VYE++  V LILEL +GGEL
Sbjct: 52  ----RRGVSRED--IEREVSILKEI-----QHPNVITLHEVYENKTDVILILELVAGGEL 100
Query: 130 FDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSP-LKIMD 188
           FD +  +E   E  A   ++QI  G+  LH   I H DLKPEN + L+     P +KI+D
Sbjct: 101 FDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIID 160
Query: 189 FGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQS 248
           FGL+    + +    +FG+ ++V+PE +  + +  ++DMWS+GVI YILLSG  PF+  +
Sbjct: 161 FGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT 220
Query: 249 NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
            ++    + A  + F ++ + N S+ AK  I  LL  DP +R + Q+ L HPW+
Sbjct: 221 KQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 274

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score =  173 bits (439), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 101/294 (34%), Positives = 158/294 (53%), Gaps = 30/294 (10%)
Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIG 69
           D Y+  + LG G F+VV++  +K+ G          RR  S+                  
Sbjct: 11  DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSS------------------ 52
Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
               R+ VS  D  +  E+ ++++I      HPNVI L++VYE++  V LILEL +GGEL
Sbjct: 53  ----RRGVSRED--IEREVSILKEI-----QHPNVITLHEVYENKTDVILILELVAGGEL 101
Query: 130 FDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSP-LKIMD 188
           FD +  +E   E  A   ++QI  G+  LH   I H DLKPEN + L+     P +KI+D
Sbjct: 102 FDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 189 FGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQS 248
           FGL+    + +    +FG+ ++V+PE +  + +  ++DMWS+GVI YILLSG  PF+  +
Sbjct: 162 FGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT 221
Query: 249 NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
            ++    + A  + F ++ + N S+ AK  I  LL  DP +R + Q+ L HPW+
Sbjct: 222 KQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score =  173 bits (439), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 101/294 (34%), Positives = 158/294 (53%), Gaps = 30/294 (10%)
Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIG 69
           D Y+  + LG G F+VV++  +K+ G          RR  S+                  
Sbjct: 11  DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSS------------------ 52
Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
               R+ VS  D  +  E+ ++++I      HPNVI L++VYE++  V LILEL +GGEL
Sbjct: 53  ----RRGVSRED--IEREVSILKEI-----QHPNVITLHEVYENKTDVILILELVAGGEL 101
Query: 130 FDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSP-LKIMD 188
           FD +  +E   E  A   ++QI  G+  LH   I H DLKPEN + L+     P +KI+D
Sbjct: 102 FDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 189 FGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQS 248
           FGL+    + +    +FG+ ++V+PE +  + +  ++DMWS+GVI YILLSG  PF+  +
Sbjct: 162 FGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT 221
Query: 249 NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
            ++    + A  + F ++ + N S+ AK  I  LL  DP +R + Q+ L HPW+
Sbjct: 222 KQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score =  173 bits (438), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 101/294 (34%), Positives = 158/294 (53%), Gaps = 30/294 (10%)
Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIG 69
           D Y+  + LG G F+VV++  +K+ G          RR  S+                  
Sbjct: 11  DYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSS------------------ 52
Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
               R+ VS  D  +  E+ ++++I      HPNVI L++VYE++  V LILEL +GGEL
Sbjct: 53  ----RRGVSRED--IEREVSILKEI-----QHPNVITLHEVYENKTDVILILELVAGGEL 101
Query: 130 FDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSP-LKIMD 188
           FD +  +E   E  A   ++QI  G+  LH   I H DLKPEN + L+     P +KI+D
Sbjct: 102 FDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 189 FGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQS 248
           FGL+    + +    +FG+ ++V+PE +  + +  ++DMWS+GVI YILLSG  PF+  +
Sbjct: 162 FGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT 221
Query: 249 NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
            ++    + A  + F ++ + N S+ AK  I  LL  DP +R + Q+ L HPW+
Sbjct: 222 KQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score =  172 bits (437), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 101/294 (34%), Positives = 157/294 (53%), Gaps = 30/294 (10%)
Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIG 69
           D Y+  + LG G F+VV++  +K+ G          RR  S+                  
Sbjct: 11  DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSS------------------ 52
Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
               R+ VS  D  +  E+ ++++I      HPNVI L++VYE++  V LILEL +GGEL
Sbjct: 53  ----RRGVSRED--IEREVSILKEI-----QHPNVITLHEVYENKTDVILILELVAGGEL 101
Query: 130 FDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSP-LKIMD 188
           FD +  +E   E  A   ++QI  G+  LH   I H DLKPEN + L+     P +KI+D
Sbjct: 102 FDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 189 FGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQS 248
           FGL+    + +    +FG+  +V+PE +  + +  ++DMWS+GVI YILLSG  PF+  +
Sbjct: 162 FGLAHKIDFGNEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT 221
Query: 249 NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
            ++    + A  + F ++ + N S+ AK  I  LL  DP +R + Q+ L HPW+
Sbjct: 222 KQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275

>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283

Iteration: 1
 Score =  172 bits (437), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 100/296 (33%), Positives = 160/296 (54%), Gaps = 30/296 (10%)
Query: 8   LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQ 67
           + D YE+ + LG G F++VR+  +K  G+         RR+ S+                
Sbjct: 3   VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSS---------------- 46
Query: 68  IGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGG 127
                 R+ VS  +  +  E+ ++R+I      HPN+I L+D++E++  V LILEL SGG
Sbjct: 47  ------RRGVSREE--IEREVNILREI-----RHPNIITLHDIFENKTDVVLILELVSGG 93
Query: 128 ELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSP-LKI 186
           ELFD +  +E   E  A   ++QI +G+  LH   I H DLKPEN + L+    +P +K+
Sbjct: 94  ELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKL 153
Query: 187 MDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIA 246
           +DFG++      +    +FG+ ++V+PE +  + +  ++DMWS+GVI YILLSG  PF+ 
Sbjct: 154 IDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 213
Query: 247 QSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
           ++ ++    I A  + F E+ + N S  AK  I  LL  DP RR +  + L H W+
Sbjct: 214 ETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWI 269

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score =  172 bits (436), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 111/341 (32%), Positives = 171/341 (50%), Gaps = 47/341 (13%)
Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIG 69
           D YE+ +++G+G FSVVRR I +  G+  Q A+K +                      + 
Sbjct: 24  DVYELCEVIGKGAFSVVRRCINRETGQ--QFAVKIV---------------------DVA 60
Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
            F +   +S  D      I  M K       HP++++L + Y     ++++ E   G +L
Sbjct: 61  KFTSSPGLSTEDLKREASICHMLK-------HPHIVELLETYSSDGMLYMVFEFMDGADL 113
Query: 130 FDRIVAQER----YMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLK 185
              IV +      Y E  A+  +RQI E L   H  NI+HRD+KPEN L  +    +P+K
Sbjct: 114 CFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVK 173
Query: 186 IMDFGLSSVEGYTDPVV-GLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF 244
           + DFG++   G +  V  G  G+  +++PE + ++      D+W  GVIL+ILLSG  PF
Sbjct: 174 LGDFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233
Query: 245 IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIG 304
                R  +  I+ G++    + W +IS SAK L+  +L +DP  R +  E LNHPW+  
Sbjct: 234 YGTKERLFEG-IIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWL-- 290
Query: 305 DSAKEEEMDA------EIVSRLQSFNARRKLRAAAIASVLS 339
              KE +  A      E V +L+ FNARRKL+ A +A+V S
Sbjct: 291 ---KERDRYAYKIHLPETVEQLRKFNARRKLKGAVLAAVSS 328

>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278

Iteration: 1
 Score =  172 bits (435), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 100/296 (33%), Positives = 159/296 (53%), Gaps = 30/296 (10%)
Query: 8   LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQ 67
           + D YE+ + LG G F++VR+  +K  G+         RR+ S+                
Sbjct: 10  VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSS---------------- 53
Query: 68  IGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGG 127
                 R+ VS  +  +  E+ ++R+I      HPN+I L+D++E++  V LILEL SGG
Sbjct: 54  ------RRGVSREE--IEREVNILREI-----RHPNIITLHDIFENKTDVVLILELVSGG 100
Query: 128 ELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSP-LKI 186
           ELFD +  +E   E  A   ++QI +G+  LH   I H DLKPEN + L+    +P +K+
Sbjct: 101 ELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKL 160
Query: 187 MDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIA 246
           +DFG++      +    +FG+ ++V+PE +  + +  ++DMWS+GVI YILLSG  PF+ 
Sbjct: 161 IDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 220
Query: 247 QSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
           ++ ++    I A  + F E+ + N S  AK  I  LL  DP RR    + L H W+
Sbjct: 221 ETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWI 276

>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304

Iteration: 1
 Score =  171 bits (433), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 100/296 (33%), Positives = 159/296 (53%), Gaps = 30/296 (10%)
Query: 8   LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQ 67
           + D YE+ + LG G F++VR+  +K  G+         RR+ S+                
Sbjct: 24  VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSS---------------- 67
Query: 68  IGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGG 127
                 R+ VS  +  +  E+ ++R+I      HPN+I L+D++E++  V LILEL SGG
Sbjct: 68  ------RRGVSREE--IEREVNILREI-----RHPNIITLHDIFENKTDVVLILELVSGG 114
Query: 128 ELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSP-LKI 186
           ELFD +  +E   E  A   ++QI +G+  LH   I H DLKPEN + L+    +P +K+
Sbjct: 115 ELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKL 174
Query: 187 MDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIA 246
           +DFG++      +    +FG+ ++V+PE +  + +  ++DMWS+GVI YILLSG  PF+ 
Sbjct: 175 IDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 234
Query: 247 QSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
           ++ ++    I A  + F E+ + N S  AK  I  LL  DP RR    + L H W+
Sbjct: 235 ETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWI 290

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score =  171 bits (432), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 100/294 (34%), Positives = 157/294 (53%), Gaps = 30/294 (10%)
Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIG 69
           D Y+  + LG G F+VV++  +K+ G          RR  S+                  
Sbjct: 11  DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSS------------------ 52
Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
               R+ VS  D  +  E+ ++++I      HPNVI L++VYE++  V LI EL +GGEL
Sbjct: 53  ----RRGVSRED--IEREVSILKEI-----QHPNVITLHEVYENKTDVILIGELVAGGEL 101
Query: 130 FDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSP-LKIMD 188
           FD +  +E   E  A   ++QI  G+  LH   I H DLKPEN + L+     P +KI+D
Sbjct: 102 FDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 189 FGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQS 248
           FGL+    + +    +FG+ ++V+PE +  + +  ++DMWS+GVI YILLSG  PF+  +
Sbjct: 162 FGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT 221
Query: 249 NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
            ++    + A  + F ++ + N S+ AK  I  LL  DP +R + Q+ L HPW+
Sbjct: 222 KQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275

>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361

Iteration: 1
 Score =  170 bits (430), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/366 (31%), Positives = 193/366 (52%), Gaps = 44/366 (12%)
Query: 2   GQET---RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPX 58
           G ET   +K+ D Y++ + LG G F++V++  +K+ G   + A K +++  S        
Sbjct: 1   GMETFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTG--LEYAAKFIKKRQSRA------ 52
Query: 59  XXXXXXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVH 118
                         +R+ V   +  +  E+ ++R+++     HPN+I L+DVYE++  V 
Sbjct: 53  --------------SRRGVCREE--IEREVSILRQVL-----HPNIITLHDVYENRTDVV 91
Query: 119 LILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLND 178
           LILEL SGGELFD +  +E   E  A + I+QI +G+  LH   I H DLKPEN + L+ 
Sbjct: 92  LILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDK 151
Query: 179 REDSP-LKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYIL 237
               P +K++DFGL+           +FG+ ++V+PE +  + +  ++DMWS+GVI YIL
Sbjct: 152 NIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 211
Query: 238 LSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELL 297
           LSG  PF+  + ++    I A  + F E+ +   S  AK  I  LL  +  +R + QE L
Sbjct: 212 LSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEAL 271
Query: 298 NHPWVIGDSAKEEEMDAEIVSRLQSFN---ARRKLRAA-AIASV-------LSSTIFLRR 346
            HPW+     ++  +  E V  L++F     RR+ + + +I S+       L   + LR 
Sbjct: 272 RHPWITPVDTQQAMVRRESVVNLENFKKQYVRRRWKLSFSIVSLCNHLTRSLMKKVHLRT 331
Query: 347 TKKLKN 352
           ++ L+N
Sbjct: 332 SEDLRN 337

>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score =  167 bits (423), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/331 (32%), Positives = 177/331 (53%), Gaps = 30/331 (9%)
Query: 6   RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXX 65
           +K+ D Y++ + LG G F++V++  +K+ G   + A K +++  S               
Sbjct: 8   QKVEDFYDIGEELGSGQFAIVKKCREKSTG--LEYAAKFIKKRQSRA------------- 52
Query: 66  XQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCS 125
                  +R+ VS  +  +  E+ ++R+++     H NVI L+DVYE++  V LILEL S
Sbjct: 53  -------SRRGVSREE--IEREVSILRQVL-----HHNVITLHDVYENRTDVVLILELVS 98
Query: 126 GGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSP-L 184
           GGELFD +  +E   E  A + I+QI +G+  LH   I H DLKPEN + L+     P +
Sbjct: 99  GGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHI 158
Query: 185 KIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF 244
           K++DFGL+           +FG+ ++V+PE +  + +  ++DMWS+GVI YILLSG  PF
Sbjct: 159 KLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
Query: 245 IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIG 304
           +  + ++    I A  + F E+ +   S  AK  I  LL  +  +R + QE L HPW+  
Sbjct: 219 LGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITP 278
Query: 305 DSAKEEEMDAEIVSRLQSFNARRKLRAAAIA 335
              ++  +  E V  L++F  +   R + +A
Sbjct: 279 VDNQQAMVRRESVVNLENFRKQYVRRRSKLA 309

>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score =  166 bits (421), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 106/331 (32%), Positives = 178/331 (53%), Gaps = 30/331 (9%)
Query: 6   RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXX 65
           +K+ D Y++ + LG G F++V++  +K+ G   + A K +++  S               
Sbjct: 8   QKVEDFYDIGEELGSGQFAIVKKCREKSTG--LEYAAKFIKKRQSRA------------- 52
Query: 66  XQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCS 125
                  +R+ VS  +  +  E+ ++R+++     H NVI L+DVYE++  V LILEL S
Sbjct: 53  -------SRRGVSREE--IEREVSILRQVL-----HHNVITLHDVYENRTDVVLILELVS 98
Query: 126 GGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSP-L 184
           GGELFD +  +E   E  A + I+QI +G+  LH   I H DLKPEN + L+     P +
Sbjct: 99  GGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHI 158
Query: 185 KIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF 244
           K++DFGL+           +FG+ ++V+PE +  + +  ++DMWS+GVI YILLSG  PF
Sbjct: 159 KLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
Query: 245 IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIG 304
           +  + ++    I +  + F E+ + + S  AK  I  LL  +  +R + QE L HPW+  
Sbjct: 219 LGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITP 278
Query: 305 DSAKEEEMDAEIVSRLQSFNARRKLRAAAIA 335
              ++  +  E V  L++F  +   R + +A
Sbjct: 279 VDNQQAMVRRESVVNLENFRKQYVRRRSKLA 309

>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321

Iteration: 1
 Score =  165 bits (418), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 107/329 (32%), Positives = 176/329 (53%), Gaps = 33/329 (10%)
Query: 6   RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXX 65
           +K+ D Y++ + LG G F++V++  +K+ G   + A K +++  S               
Sbjct: 8   QKVEDFYDIGEELGSGQFAIVKKCREKSTG--LEYAAKFIKKRQSRA------------- 52
Query: 66  XQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCS 125
                  +R+ VS  +  +  E+ ++R+++     H NVI L+DVYE++  V LILEL S
Sbjct: 53  -------SRRGVSREE--IEREVSILRQVL-----HHNVITLHDVYENRTDVVLILELVS 98
Query: 126 GGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSP-L 184
           GGELFD +  +E   E  A + I+QI +G+  LH   I H DLKPEN + L+     P +
Sbjct: 99  GGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHI 158
Query: 185 KIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF 244
           K++DFGL+           +FG+ ++V+PE +  + +  ++DMWS+GVI YILLSG  PF
Sbjct: 159 KLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
Query: 245 IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIG 304
           +  + ++    I A  + F E+ +   S  AK  I  LL  +  +R + QE L HPW+  
Sbjct: 219 LGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITP 278
Query: 305 DSAKEEEMDAEIVSRLQSFN---ARRKLR 330
              ++  +  E V  L++F     RR+ +
Sbjct: 279 VDNQQAMVRRESVVNLENFRKQYVRRRWK 307

>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321

Iteration: 1
 Score =  164 bits (416), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 106/329 (32%), Positives = 177/329 (53%), Gaps = 33/329 (10%)
Query: 6   RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXX 65
           +K+ D Y++ + LG G F++V++  +K+ G   + A K +++  S               
Sbjct: 8   QKVEDFYDIGEELGSGQFAIVKKCREKSTG--LEYAAKFIKKRQSRA------------- 52
Query: 66  XQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCS 125
                  +R+ VS  +  +  E+ ++R+++     H NVI L+DVYE++  V LILEL S
Sbjct: 53  -------SRRGVSREE--IEREVSILRQVL-----HHNVITLHDVYENRTDVVLILELVS 98
Query: 126 GGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSP-L 184
           GGELFD +  +E   E  A + I+QI +G+  LH   I H DLKPEN + L+     P +
Sbjct: 99  GGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHI 158
Query: 185 KIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF 244
           K++DFGL+           +FG+ ++V+PE +  + +  ++DMWS+GVI YILLSG  PF
Sbjct: 159 KLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
Query: 245 IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIG 304
           +  + ++    I +  + F E+ + + S  AK  I  LL  +  +R + QE L HPW+  
Sbjct: 219 LGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITP 278
Query: 305 DSAKEEEMDAEIVSRLQSFN---ARRKLR 330
              ++  +  E V  L++F     RR+ +
Sbjct: 279 VDNQQAMVRRESVVNLENFRKQYVRRRWK 307

>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351

Iteration: 1
 Score =  164 bits (416), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 111/342 (32%), Positives = 173/342 (50%), Gaps = 49/342 (14%)
Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIG 69
           D YE+ +++G+G FSVVRR I +  G+  Q A+K +                      + 
Sbjct: 24  DVYELCEVIGKGPFSVVRRCINRETGQ--QFAVKIV---------------------DVA 60
Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
            F +   +S  D      I  M K       HP++++L + Y     ++++ E   G +L
Sbjct: 61  KFTSSPGLSTEDLKREASICHMLK-------HPHIVELLETYSSDGMLYMVFEFMDGADL 113
Query: 130 FDRIVAQER----YMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDS-PL 184
              IV +      Y E  A+  +RQI E L   H  NI+HRD+KP +C+ L  +E+S P+
Sbjct: 114 CFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKP-HCVLLASKENSAPV 172
Query: 185 KIMDFGLSSVEGYTDPVV-GLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPP 243
           K+  FG++   G +  V  G  G+  +++PE + ++      D+W  GVIL+ILLSG  P
Sbjct: 173 KLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP 232
Query: 244 FIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVI 303
           F     R  +  I+ G++    + W +IS SAK L+  +L +DP  R +  E LNHPW+ 
Sbjct: 233 FYGTKERLFEG-IIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWL- 290
Query: 304 GDSAKEEEMDA------EIVSRLQSFNARRKLRAAAIASVLS 339
               KE +  A      E V +L+ FNARRKL+ A +A+V S
Sbjct: 291 ----KERDRYAYKIHLPETVEQLRKFNARRKLKGAVLAAVSS 328

>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361

Iteration: 1
 Score =  164 bits (416), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 111/342 (32%), Positives = 173/342 (50%), Gaps = 49/342 (14%)
Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIG 69
           D YE+ +++G+G FSVVRR I +  G+  Q A+K +                      + 
Sbjct: 26  DVYELCEVIGKGPFSVVRRCINRETGQ--QFAVKIV---------------------DVA 62
Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
            F +   +S  D      I  M K       HP++++L + Y     ++++ E   G +L
Sbjct: 63  KFTSSPGLSTEDLKREASICHMLK-------HPHIVELLETYSSDGMLYMVFEFMDGADL 115
Query: 130 FDRIVAQER----YMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDS-PL 184
              IV +      Y E  A+  +RQI E L   H  NI+HRD+KP +C+ L  +E+S P+
Sbjct: 116 CFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKP-HCVLLASKENSAPV 174
Query: 185 KIMDFGLSSVEGYTDPVV-GLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPP 243
           K+  FG++   G +  V  G  G+  +++PE + ++      D+W  GVIL+ILLSG  P
Sbjct: 175 KLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP 234
Query: 244 FIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVI 303
           F     R  +  I+ G++    + W +IS SAK L+  +L +DP  R +  E LNHPW+ 
Sbjct: 235 FYGTKERLFEG-IIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWL- 292
Query: 304 GDSAKEEEMDA------EIVSRLQSFNARRKLRAAAIASVLS 339
               KE +  A      E V +L+ FNARRKL+ A +A+V S
Sbjct: 293 ----KERDRYAYKIHLPETVEQLRKFNARRKLKGAVLAAVSS 330

>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325

Iteration: 1
 Score =  164 bits (416), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 95/293 (32%), Positives = 153/293 (52%), Gaps = 45/293 (15%)
Query: 18  LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFFPTRKQV 77
           LG G FS+ R+ + K   +   V I + R   +T                      +K++
Sbjct: 19  LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANT----------------------QKEI 56
Query: 78  SVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE 137
           +              K+ E    HPN++ L++V+ DQ    L++EL +GGELF+RI  ++
Sbjct: 57  TA------------LKLCEG---HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKK 101
Query: 138 RYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGY 197
            + E  A+ ++R++   ++ +H   +VHRDLKPEN LF ++ ++  +KI+DFG + ++  
Sbjct: 102 HFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPP 161
Query: 198 TD-PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQ-------SN 249
            + P+     ++ Y +PE L Q+      D+WSLGVILY +LSG  PF +        S 
Sbjct: 162 DNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSA 221
Query: 250 RQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
            +  + I  G+FSF  + WKN+S  AK LI  LLTVDPN+R     L  + W+
Sbjct: 222 VEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWL 274

>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288

Iteration: 1
 Score =  164 bits (414), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 100/298 (33%), Positives = 164/298 (55%), Gaps = 30/298 (10%)
Query: 6   RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXX 65
           +K+ D Y++ + LG G F++V++  +K+ G   + A K +++  S               
Sbjct: 8   QKVEDFYDIGEELGSGQFAIVKKCREKSTG--LEYAAKFIKKRQSRA------------- 52
Query: 66  XQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCS 125
                  +R+ VS  +  +  E+ ++R+++     H NVI L+DVYE++  V LILEL S
Sbjct: 53  -------SRRGVSREE--IEREVSILRQVL-----HHNVITLHDVYENRTDVVLILELVS 98
Query: 126 GGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSP-L 184
           GGELFD +  +E   E  A + I+QI +G+  LH   I H DLKPEN + L+     P +
Sbjct: 99  GGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHI 158
Query: 185 KIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF 244
           K++DFGL+           +FG+ ++V+PE +  + +  ++DMWS+GVI YILLSG  PF
Sbjct: 159 KLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
Query: 245 IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
           +  + ++    I +  + F E+ + + S  AK  I  LL  +  +R + QE L HPW+
Sbjct: 219 LGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 276

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score =  162 bits (410), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 109/306 (35%), Positives = 154/306 (50%), Gaps = 36/306 (11%)
Query: 3   QETRKLTDEYEVTDILGRGGFSVVRRGIKK-TCGETNQVAIKTLRRIGSTTPYGFPXXXX 61
             T    + YE  +ILGRG  SVVRR I K TC E    A+K +   G            
Sbjct: 10  HSTHGFYENYEPKEILGRGVSSVVRRCIHKPTCKE---YAVKIIDVTGG----------- 55
Query: 62  XXXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLIL 121
                  G F   +   + +A L  E+ ++RK    VS HPN+I L D YE      L+ 
Sbjct: 56  -------GSFSAEEVQELREATL-KEVDILRK----VSGHPNIIQLKDTYETNTFFFLVF 103
Query: 122 ELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRED 181
           +L   GELFD +  +    E     ++R + E + ALH+ NIVHRDLKPEN L L+D  D
Sbjct: 104 DLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENIL-LDD--D 160
Query: 182 SPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEAL---LQDR---ITSKSDMWSLGVILY 235
             +K+ DFG S      + +  + G+  Y++PE +   + D       + DMWS GVI+Y
Sbjct: 161 MNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMY 220
Query: 236 ILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQE 295
            LL+G PPF  +      +MIM+G + F    W + S + K L+S  L V P +R +A+E
Sbjct: 221 TLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEE 280
Query: 296 LLNHPW 301
            L HP+
Sbjct: 281 ALAHPF 286

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score =  161 bits (408), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 109/306 (35%), Positives = 154/306 (50%), Gaps = 36/306 (11%)
Query: 3   QETRKLTDEYEVTDILGRGGFSVVRRGIKK-TCGETNQVAIKTLRRIGSTTPYGFPXXXX 61
             T    + YE  +ILGRG  SVVRR I K TC E    A+K +   G            
Sbjct: 10  HSTHGFYENYEPKEILGRGVSSVVRRCIHKPTCKE---YAVKIIDVTGG----------- 55
Query: 62  XXXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLIL 121
                  G F   +   + +A L  E+ ++RK    VS HPN+I L D YE      L+ 
Sbjct: 56  -------GSFSAEEVQELREATL-KEVDILRK----VSGHPNIIQLKDTYETNTFFFLVF 103
Query: 122 ELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRED 181
           +L   GELFD +  +    E     ++R + E + ALH+ NIVHRDLKPEN L L+D  D
Sbjct: 104 DLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENIL-LDD--D 160
Query: 182 SPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEAL---LQDR---ITSKSDMWSLGVILY 235
             +K+ DFG S      + +  + G+  Y++PE +   + D       + DMWS GVI+Y
Sbjct: 161 MNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMY 220
Query: 236 ILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQE 295
            LL+G PPF  +      +MIM+G + F    W + S + K L+S  L V P +R +A+E
Sbjct: 221 TLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEE 280
Query: 296 LLNHPW 301
            L HP+
Sbjct: 281 ALAHPF 286

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score =  160 bits (405), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/299 (36%), Positives = 153/299 (51%), Gaps = 36/299 (12%)
Query: 10  DEYEVTDILGRGGFSVVRRGIKK-TCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQI 68
           + YE  +ILGRG  SVVRR I K TC E    A+K +   G                   
Sbjct: 4   ENYEPKEILGRGVSSVVRRCIHKPTCKE---YAVKIIDVTGG------------------ 42
Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
           G F   +   + +A L  E+ ++RK    VS HPN+I L D YE      L+ +L   GE
Sbjct: 43  GSFSAEEVQELREATL-KEVDILRK----VSGHPNIIQLKDTYETNTFFFLVFDLMKKGE 97
Query: 129 LFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMD 188
           LFD +  +    E     ++R + E + ALH+ NIVHRDLKPEN L L+D  D  +K+ D
Sbjct: 98  LFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENIL-LDD--DMNIKLTD 154
Query: 189 FGLSSVEGYTDPVVGLFGSIDYVSPEAL---LQDR---ITSKSDMWSLGVILYILLSGYP 242
           FG S      + +  + G+  Y++PE +   + D       + DMWS GVI+Y LL+G P
Sbjct: 155 FGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSP 214
Query: 243 PFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPW 301
           PF  +      +MIM+G + F    W + S + K L+S  L V P +R +A+E L HP+
Sbjct: 215 PFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPF 273

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score =  159 bits (402), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 84/220 (38%), Positives = 135/220 (61%), Gaps = 7/220 (3%)
Query: 84  LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYM-EV 142
           + NEI VM ++      H N+I LYD +E +N + L++E   GGELFDRI+ +   + E+
Sbjct: 133 VKNEISVMNQL-----DHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTEL 187
Query: 143 GAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVV 202
                ++QI EG+  +HQ  I+H DLKPEN L +N R+   +KI+DFGL+      + + 
Sbjct: 188 DTILFMKQICEGIRHMHQMYILHLDLKPENILCVN-RDAKQIKIIDFGLARRYKPREKLK 246
Query: 203 GLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFS 262
             FG+ ++++PE +  D ++  +DMWS+GVI Y+LLSG  PF+  ++ +    I+A  + 
Sbjct: 247 VNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWD 306
Query: 263 FYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
             ++ +++IS  AK+ IS LL  + + R SA E L HPW+
Sbjct: 307 LEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWL 346

>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322

Iteration: 1
 Score =  159 bits (401), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 105/323 (32%), Positives = 156/323 (48%), Gaps = 44/323 (13%)
Query: 1   MGQETRKLTDEYEVTDILGRGGFSVVRRGI-KKTCGETNQVAIKTLRR----IGSTTPYG 55
           M    + L DEY ++  LG G    V+    +KTC    +VAIK + +    IGS     
Sbjct: 1   MSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTC---KKVAIKIISKRKFAIGSAR--- 54
Query: 56  FPXXXXXXXXXQIGFFPTRKQVSVSDAL-LTNEILVMRKIVENVSPHPNVIDLYDVYEDQ 114
                                     AL +  EI +++K+      HP +I + + + D 
Sbjct: 55  ----------------------EADPALNVETEIEILKKL-----NHPCIIKIKNFF-DA 86
Query: 115 NGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCL 174
              +++LEL  GGELFD++V  +R  E        Q+   +  LH+  I+HRDLKPEN L
Sbjct: 87  EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVL 146
Query: 175 FLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKS---DMWSLG 231
             +  ED  +KI DFG S + G T  +  L G+  Y++PE L+       +   D WSLG
Sbjct: 147 LSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLG 206
Query: 232 VILYILLSGYPPFIAQSNRQK-QQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR 290
           VIL+I LSGYPPF     +   +  I +G+++F  + W  +S  A  L+  LL VDP  R
Sbjct: 207 VILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKAR 266
Query: 291 PSAQELLNHPWVIGDSAKEEEMD 313
            + +E L HPW+  +  K +  D
Sbjct: 267 FTTEEALRHPWLQDEDMKRKFQD 289

>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323

Iteration: 1
 Score =  159 bits (401), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 105/323 (32%), Positives = 156/323 (48%), Gaps = 44/323 (13%)
Query: 1   MGQETRKLTDEYEVTDILGRGGFSVVRRGI-KKTCGETNQVAIKTLRR----IGSTTPYG 55
           M    + L DEY ++  LG G    V+    +KTC    +VAIK + +    IGS     
Sbjct: 1   MSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTC---KKVAIKIISKRKFAIGSAR--- 54
Query: 56  FPXXXXXXXXXQIGFFPTRKQVSVSDAL-LTNEILVMRKIVENVSPHPNVIDLYDVYEDQ 114
                                     AL +  EI +++K+      HP +I + + + D 
Sbjct: 55  ----------------------EADPALNVETEIEILKKL-----NHPCIIKIKNFF-DA 86
Query: 115 NGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCL 174
              +++LEL  GGELFD++V  +R  E        Q+   +  LH+  I+HRDLKPEN L
Sbjct: 87  EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVL 146
Query: 175 FLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKS---DMWSLG 231
             +  ED  +KI DFG S + G T  +  L G+  Y++PE L+       +   D WSLG
Sbjct: 147 LSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLG 206
Query: 232 VILYILLSGYPPFIAQSNRQK-QQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR 290
           VIL+I LSGYPPF     +   +  I +G+++F  + W  +S  A  L+  LL VDP  R
Sbjct: 207 VILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKAR 266
Query: 291 PSAQELLNHPWVIGDSAKEEEMD 313
            + +E L HPW+  +  K +  D
Sbjct: 267 FTTEEALRHPWLQDEDMKRKFQD 289

>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323

Iteration: 1
 Score =  159 bits (401), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 105/323 (32%), Positives = 156/323 (48%), Gaps = 44/323 (13%)
Query: 1   MGQETRKLTDEYEVTDILGRGGFSVVRRGI-KKTCGETNQVAIKTLRR----IGSTTPYG 55
           M    + L DEY ++  LG G    V+    +KTC    +VAIK + +    IGS     
Sbjct: 1   MSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTC---KKVAIKIISKRKFAIGSAR--- 54
Query: 56  FPXXXXXXXXXQIGFFPTRKQVSVSDAL-LTNEILVMRKIVENVSPHPNVIDLYDVYEDQ 114
                                     AL +  EI +++K+      HP +I + + + D 
Sbjct: 55  ----------------------EADPALNVETEIEILKKL-----NHPCIIKIKNFF-DA 86
Query: 115 NGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCL 174
              +++LEL  GGELFD++V  +R  E        Q+   +  LH+  I+HRDLKPEN L
Sbjct: 87  EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVL 146
Query: 175 FLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKS---DMWSLG 231
             +  ED  +KI DFG S + G T  +  L G+  Y++PE L+       +   D WSLG
Sbjct: 147 LSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLG 206
Query: 232 VILYILLSGYPPFIAQSNRQK-QQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR 290
           VIL+I LSGYPPF     +   +  I +G+++F  + W  +S  A  L+  LL VDP  R
Sbjct: 207 VILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKAR 266
Query: 291 PSAQELLNHPWVIGDSAKEEEMD 313
            + +E L HPW+  +  K +  D
Sbjct: 267 FTTEEALRHPWLQDEDMKRKFQD 289

>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322

Iteration: 1
 Score =  158 bits (400), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 104/318 (32%), Positives = 155/318 (48%), Gaps = 44/318 (13%)
Query: 6   RKLTDEYEVTDILGRGGFSVVRRGI-KKTCGETNQVAIKTLRR----IGSTTPYGFPXXX 60
           + L DEY ++  LG G    V+    +KTC    +VAIK + +    IGS          
Sbjct: 5   KALRDEYIMSKTLGSGACGEVKLAFERKTC---KKVAIKIISKRKFAIGSAR-------- 53
Query: 61  XXXXXXQIGFFPTRKQVSVSDAL-LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHL 119
                                AL +  EI +++K+      HP +I + + + D    ++
Sbjct: 54  -----------------EADPALNVETEIEILKKL-----NHPCIIKIKNFF-DAEDYYI 90
Query: 120 ILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDR 179
           +LEL  GGELFD++V  +R  E        Q+   +  LH+  I+HRDLKPEN L  +  
Sbjct: 91  VLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQE 150
Query: 180 EDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKS---DMWSLGVILYI 236
           ED  +KI DFG S + G T  +  L G+  Y++PE L+       +   D WSLGVIL+I
Sbjct: 151 EDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFI 210
Query: 237 LLSGYPPFIAQSNRQK-QQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQE 295
            LSGYPPF     +   +  I +G+++F  + W  +S  A  L+  LL VDP  R + +E
Sbjct: 211 CLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEE 270
Query: 296 LLNHPWVIGDSAKEEEMD 313
            L HPW+  +  K +  D
Sbjct: 271 ALRHPWLQDEDMKRKFQD 288

>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329

Iteration: 1
 Score =  158 bits (400), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 105/323 (32%), Positives = 156/323 (48%), Gaps = 44/323 (13%)
Query: 1   MGQETRKLTDEYEVTDILGRGGFSVVRRGI-KKTCGETNQVAIKTLRR----IGSTTPYG 55
           M    + L DEY ++  LG G    V+    +KTC    +VAIK + +    IGS     
Sbjct: 7   MSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTC---KKVAIKIISKRKFAIGSAR--- 60
Query: 56  FPXXXXXXXXXQIGFFPTRKQVSVSDAL-LTNEILVMRKIVENVSPHPNVIDLYDVYEDQ 114
                                     AL +  EI +++K+      HP +I + + + D 
Sbjct: 61  ----------------------EADPALNVETEIEILKKL-----NHPCIIKIKNFF-DA 92
Query: 115 NGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCL 174
              +++LEL  GGELFD++V  +R  E        Q+   +  LH+  I+HRDLKPEN L
Sbjct: 93  EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVL 152
Query: 175 FLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKS---DMWSLG 231
             +  ED  +KI DFG S + G T  +  L G+  Y++PE L+       +   D WSLG
Sbjct: 153 LSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLG 212
Query: 232 VILYILLSGYPPFIAQSNRQK-QQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR 290
           VIL+I LSGYPPF     +   +  I +G+++F  + W  +S  A  L+  LL VDP  R
Sbjct: 213 VILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKAR 272
Query: 291 PSAQELLNHPWVIGDSAKEEEMD 313
            + +E L HPW+  +  K +  D
Sbjct: 273 FTTEEALRHPWLQDEDMKRKFQD 295

>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327

Iteration: 1
 Score =  158 bits (400), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 97/287 (33%), Positives = 156/287 (54%), Gaps = 34/287 (11%)
Query: 18  LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFFPTRKQV 77
           LGRG F+VVR+ I K+ G+  + A K L++                          R++ 
Sbjct: 37  LGRGKFAVVRQCISKSTGQ--EYAAKFLKK--------------------------RRRG 68
Query: 78  SVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ- 136
               A + +EI V+    E     P VI+L++VYE+ + + LILE  +GGE+F   + + 
Sbjct: 69  QDCRAEILHEIAVL----ELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPEL 124
Query: 137 -ERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVE 195
            E   E     +I+QI EG+  LHQ NIVH DLKP+N L  +      +KI+DFG+S   
Sbjct: 125 AEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKI 184
Query: 196 GYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQM 255
           G+   +  + G+ +Y++PE L  D IT+ +DMW++G+I Y+LL+   PF+ + N++    
Sbjct: 185 GHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLN 244
Query: 256 IMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
           I      + E+T+ ++S  A   I SLL  +P +RP+A+  L+H W+
Sbjct: 245 ISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWL 291

>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387

Iteration: 1
 Score =  157 bits (398), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 159/301 (52%), Gaps = 37/301 (12%)
Query: 8   LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQ 67
           + D Y++ + LG G F VV R ++K  G   +V +         TPY             
Sbjct: 49  VYDYYDILEELGSGAFGVVHRCVEKATG---RVFVAKF----INTPY------------- 88
Query: 68  IGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGG 127
               P  K        + NEI +M ++      HP +I+L+D +ED+  + LILE  SGG
Sbjct: 89  ----PLDKYT------VKNEISIMNQL-----HHPKLINLHDAFEDKYEMVLILEFLSGG 133
Query: 128 ELFDRIVAQERYM-EVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKI 186
           ELFDRI A++  M E      +RQ  EGL  +H+ +IVH D+KPEN +    ++ S +KI
Sbjct: 134 ELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIM-CETKKASSVKI 192
Query: 187 MDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIA 246
           +DFGL++     + V     + ++ +PE + ++ +   +DMW++GV+ Y+LLSG  PF  
Sbjct: 193 IDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAG 252
Query: 247 QSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDS 306
           + + +  Q +   ++ F E  + ++S  AK  I +LL  +P +R +  + L HPW+ GD 
Sbjct: 253 EDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDH 312
Query: 307 A 307
           +
Sbjct: 313 S 313

>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443

Iteration: 1
 Score =  157 bits (397), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 103/318 (32%), Positives = 155/318 (48%), Gaps = 44/318 (13%)
Query: 6   RKLTDEYEVTDILGRGGFSVVRRGI-KKTCGETNQVAIKTLRR----IGSTTPYGFPXXX 60
           + L DEY ++  LG G    V+    +KTC    +VAI+ + +    IGS          
Sbjct: 145 KALRDEYIMSKTLGSGACGEVKLAFERKTC---KKVAIRIISKRKFAIGSAR-------- 193
Query: 61  XXXXXXQIGFFPTRKQVSVSDAL-LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHL 119
                                AL +  EI +++K+      HP +I + + + D    ++
Sbjct: 194 -----------------EADPALNVETEIEILKKL-----NHPCIIKIKNFF-DAEDYYI 230
Query: 120 ILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDR 179
           +LEL  GGELFD++V  +R  E        Q+   +  LH+  I+HRDLKPEN L  +  
Sbjct: 231 VLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQE 290
Query: 180 EDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKS---DMWSLGVILYI 236
           ED  +KI DFG S + G T  +  L G+  Y++PE L+       +   D WSLGVIL+I
Sbjct: 291 EDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFI 350
Query: 237 LLSGYPPFIAQSNRQK-QQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQE 295
            LSGYPPF     +   +  I +G+++F  + W  +S  A  L+  LL VDP  R + +E
Sbjct: 351 CLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEE 410
Query: 296 LLNHPWVIGDSAKEEEMD 313
            L HPW+  +  K +  D
Sbjct: 411 ALRHPWLQDEDMKRKFQD 428

>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419

Iteration: 1
 Score =  157 bits (396), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 103/318 (32%), Positives = 155/318 (48%), Gaps = 44/318 (13%)
Query: 6   RKLTDEYEVTDILGRGGFSVVRRGI-KKTCGETNQVAIKTLRR----IGSTTPYGFPXXX 60
           + L DEY ++  LG G    V+    +KTC    +VAI+ + +    IGS          
Sbjct: 131 KALRDEYIMSKTLGSGACGEVKLAFERKTC---KKVAIRIISKRKFAIGSAR-------- 179
Query: 61  XXXXXXQIGFFPTRKQVSVSDAL-LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHL 119
                                AL +  EI +++K+      HP +I + + + D    ++
Sbjct: 180 -----------------EADPALNVETEIEILKKL-----NHPCIIKIKNFF-DAEDYYI 216
Query: 120 ILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDR 179
           +LEL  GGELFD++V  +R  E        Q+   +  LH+  I+HRDLKPEN L  +  
Sbjct: 217 VLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQE 276
Query: 180 EDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKS---DMWSLGVILYI 236
           ED  +KI DFG S + G T  +  L G+  Y++PE L+       +   D WSLGVIL+I
Sbjct: 277 EDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFI 336
Query: 237 LLSGYPPFIAQSNRQK-QQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQE 295
            LSGYPPF     +   +  I +G+++F  + W  +S  A  L+  LL VDP  R + +E
Sbjct: 337 CLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEE 396
Query: 296 LLNHPWVIGDSAKEEEMD 313
            L HPW+  +  K +  D
Sbjct: 397 ALRHPWLQDEDMKRKFQD 414

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score =  155 bits (391), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 80/205 (39%), Positives = 124/205 (60%), Gaps = 6/205 (2%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIV-AQER---YMEVGAAAVIRQIAEGLA 156
           HPN+I +++V+ED + +++++E C GGEL +RIV AQ R     E   A +++Q+   LA
Sbjct: 79  HPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALA 138
Query: 157 ALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEAL 216
             H  ++VH+DLKPEN LF +    SP+KI+DFGL+ +    +      G+  Y++PE  
Sbjct: 139 YFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVF 198
Query: 217 LQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAK 276
            +D +T K D+WS GV++Y LL+G  PF   S  + QQ     E + Y    + ++  A 
Sbjct: 199 KRD-VTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPN-YAVECRPLTPQAV 256
Query: 277 QLISSLLTVDPNRRPSAQELLNHPW 301
            L+  +LT DP RRPSA ++L+H W
Sbjct: 257 DLLKQMLTKDPERRPSAAQVLHHEW 281

>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342

Iteration: 1
 Score =  154 bits (389), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 109/357 (30%), Positives = 183/357 (51%), Gaps = 54/357 (15%)
Query: 7   KLTDEYEVTDILGRGGFSVVRRGIKKTCGETN-QVAIKTLRRIGSTTPYGFPXXXXXXXX 65
           + TD YEV + +G G +SV +R I K    TN + A+K + +                  
Sbjct: 19  QFTDGYEVKEDIGVGSYSVCKRCIHKA---TNMEFAVKIIDK------------------ 57
Query: 66  XQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCS 125
                       S  D   T EI    +I+     HPN+I L DVY+D   V+++ EL  
Sbjct: 58  ------------SKRDP--TEEI----EILLRYGQHPNIITLKDVYDDGKYVYVVTELMK 99
Query: 126 GGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSP-- 183
           GGEL D+I+ Q+ + E  A+AV+  I + +  LH   +VHRDLKP N L++ D   +P  
Sbjct: 100 GGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYV-DESGNPES 158
Query: 184 LKIMDFGLSS-VEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYP 242
           ++I DFG +  +      ++    + ++V+PE L +    +  D+WSLGV+LY +L+GY 
Sbjct: 159 IRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYT 218
Query: 243 PFIAQSNRQKQQM---IMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH 299
           PF    +   +++   I +G+FS     W ++S +AK L+S +L VDP++R +A  +L H
Sbjct: 219 PFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278
Query: 300 PWVI-GDSAKEEEMDAEIVSRL------QSFNARRKLRAAAIASVLSSTIFLRRTKK 349
           PW++  D   + +++ +    L       +++A  + ++  +  V  ST+  RR  K
Sbjct: 279 PWIVHWDQLPQYQLNRQDAPHLVKGAMAATYSALNRNQSPVLEPVGRSTLAQRRGIK 335

>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330

Iteration: 1
 Score =  152 bits (385), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 78/208 (37%), Positives = 126/208 (60%), Gaps = 7/208 (3%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HPN+I L DVY+D   V+L+ EL  GGEL D+I+ Q+ + E  A+ V+  I + +  LH 
Sbjct: 80  HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHS 139
Query: 161 ANIVHRDLKPENCLFLNDREDSP--LKIMDFGLSS-VEGYTDPVVGLFGSIDYVSPEALL 217
             +VHRDLKP N L++ D   +P  L+I DFG +  +      ++    + ++V+PE L 
Sbjct: 140 QGVVHRDLKPSNILYV-DESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLK 198
Query: 218 QDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQM---IMAGEFSFYEQTWKNISSS 274
           +       D+WSLG++LY +L+GY PF    +   +++   I +G+F+     W  +S +
Sbjct: 199 RQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSET 258
Query: 275 AKQLISSLLTVDPNRRPSAQELLNHPWV 302
           AK L+S +L VDP++R +A+++L HPWV
Sbjct: 259 AKDLVSKMLHVDPHQRLTAKQVLQHPWV 286

>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346

Iteration: 1
 Score =  152 bits (385), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 78/208 (37%), Positives = 126/208 (60%), Gaps = 7/208 (3%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HPN+I L DVY+D   V+L+ EL  GGEL D+I+ Q+ + E  A+ V+  I + +  LH 
Sbjct: 80  HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHS 139
Query: 161 ANIVHRDLKPENCLFLNDREDSP--LKIMDFGLSS-VEGYTDPVVGLFGSIDYVSPEALL 217
             +VHRDLKP N L++ D   +P  L+I DFG +  +      ++    + ++V+PE L 
Sbjct: 140 QGVVHRDLKPSNILYV-DESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLK 198
Query: 218 QDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQM---IMAGEFSFYEQTWKNISSS 274
           +       D+WSLG++LY +L+GY PF    +   +++   I +G+F+     W  +S +
Sbjct: 199 RQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSET 258
Query: 275 AKQLISSLLTVDPNRRPSAQELLNHPWV 302
           AK L+S +L VDP++R +A+++L HPWV
Sbjct: 259 AKDLVSKMLHVDPHQRLTAKQVLQHPWV 286

>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342

Iteration: 1
 Score =  151 bits (381), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 178/356 (50%), Gaps = 52/356 (14%)
Query: 7   KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXX 66
           + TD YEV + +G G +SV +R I K      + A+K + +                   
Sbjct: 19  QFTDGYEVKEDIGVGSYSVCKRCIHKAT--NXEFAVKIIDK------------------- 57
Query: 67  QIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSG 126
                        S    T EI ++ +  +    HPN+I L DVY+D   V+++ EL  G
Sbjct: 58  -------------SKRDPTEEIEILLRYGQ----HPNIITLKDVYDDGKYVYVVTELXKG 100
Query: 127 GELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSP--L 184
           GEL D+I+ Q+ + E  A+AV+  I + +  LH   +VHRDLKP N L++ D   +P  +
Sbjct: 101 GELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYV-DESGNPESI 159
Query: 185 KIMDFGLSS-VEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPP 243
           +I DFG +  +      +     + ++V+PE L +    +  D+WSLGV+LY  L+GY P
Sbjct: 160 RICDFGFAKQLRAENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
Query: 244 FIAQSNRQKQQM---IMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHP 300
           F    +   +++   I +G+FS     W ++S +AK L+S  L VDP++R +A  +L HP
Sbjct: 220 FANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKXLHVDPHQRLTAALVLRHP 279
Query: 301 WVI-GDSAKEEEMDAEIVSRL------QSFNARRKLRAAAIASVLSSTIFLRRTKK 349
           W++  D   + +++ +    L       +++A  + ++  +  V  ST+  RR  K
Sbjct: 280 WIVHWDQLPQYQLNRQDAPHLVKGAXAATYSALNRNQSPVLEPVGRSTLAQRRGIK 335

>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b Length = 317

Iteration: 1
 Score =  149 bits (377), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 81/213 (38%), Positives = 121/213 (56%), Gaps = 15/213 (7%)
Query: 102 PNVIDLYDVYEDQNG----VHLILELCSGGELFDRIVAQER----YMEVGAAAVIRQIAE 153
           P+++ + DVYE+ +     + +I+E   GGELF RI  QER    + E  AA ++R I  
Sbjct: 63  PHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRI--QERGDQAFTEREAAEIMRDIGT 120
Query: 154 GLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSP 213
            +  LH  NI HRD+KPEN L+ +  +D+ LK+ DFG +  E   + +     +  YV+P
Sbjct: 121 AIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK-ETTQNALQTPCYTPYYVAP 179
Query: 214 EALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQ----KQQMIMAGEFSFYEQTWK 269
           E L  ++     DMWSLGVI+YILL G+PPF + + +      ++ I  G++ F    W 
Sbjct: 180 EVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWS 239
Query: 270 NISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
            +S  AKQLI  LL  DP  R +  + +NHPW+
Sbjct: 240 EVSEDAKQLIRLLLKTDPTERLTITQFMNHPWI 272

>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4-Ylamino)-2- Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide Length = 320

Iteration: 1
 Score =  149 bits (377), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 80/217 (36%), Positives = 123/217 (56%), Gaps = 20/217 (9%)
Query: 102 PNVIDLYDVYED----QNGVHLILELCSGGELFDRIV--AQERYMEVGAAAVIRQIAEGL 155
           P+++ + DVYE+    +  + +++E   GGELF RI     + + E  A+ +++ I E +
Sbjct: 69  PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 128
Query: 156 AALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGL----SSVEGYTDPVVGLFGSIDYV 211
             LH  NI HRD+KPEN L+ + R ++ LK+ DFG     +S    T+P    +    YV
Sbjct: 129 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPY----YV 184
Query: 212 SPEALLQDRITSKSDMWSLGVILYILLSGYPPF-----IAQSNRQKQQMIMAGEFSFYEQ 266
           +PE L  ++     DMWSLGVI+YILL GYPPF     +A S   K ++ M G++ F   
Sbjct: 185 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM-GQYEFPNP 243
Query: 267 TWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVI 303
            W  +S   K LI +LL  +P +R +  E +NHPW++
Sbjct: 244 EWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM 280

>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor Complex Length = 336

Iteration: 1
 Score =  149 bits (376), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 81/213 (38%), Positives = 121/213 (56%), Gaps = 15/213 (7%)
Query: 102 PNVIDLYDVYEDQNG----VHLILELCSGGELFDRIVAQER----YMEVGAAAVIRQIAE 153
           P+++ + DVYE+ +     + +I+E   GGELF RI  QER    + E  AA ++R I  
Sbjct: 82  PHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRI--QERGDQAFTEREAAEIMRDIGT 139
Query: 154 GLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSP 213
            +  LH  NI HRD+KPEN L+ +  +D+ LK+ DFG +  E   + +     +  YV+P
Sbjct: 140 AIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK-ETTQNALQTPCYTPYYVAP 198
Query: 214 EALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQ----KQQMIMAGEFSFYEQTWK 269
           E L  ++     DMWSLGVI+YILL G+PPF + + +      ++ I  G++ F    W 
Sbjct: 199 EVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWS 258
Query: 270 NISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
            +S  AKQLI  LL  DP  R +  + +NHPW+
Sbjct: 259 EVSEDAKQLIRLLLKTDPTERLTITQFMNHPWI 291

>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2 Length = 400

Iteration: 1
 Score =  149 bits (375), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 121/213 (56%), Gaps = 12/213 (5%)
Query: 102 PNVIDLYDVYED----QNGVHLILELCSGGELFDRIV--AQERYMEVGAAAVIRQIAEGL 155
           P+++ + DVYE+    +  + +++E   GGELF RI     + + E  A+ +++ I E +
Sbjct: 115 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 174
Query: 156 AALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEA 215
             LH  NI HRD+KPEN L+ + R ++ LK+ DFG +      + +     +  YV+PE 
Sbjct: 175 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 234
Query: 216 LLQDRITSKSDMWSLGVILYILLSGYPPF-----IAQSNRQKQQMIMAGEFSFYEQTWKN 270
           L  ++     DMWSLGVI+YILL GYPPF     +A S   K ++ M G++ F    W  
Sbjct: 235 LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM-GQYEFPNPEWSE 293
Query: 271 ISSSAKQLISSLLTVDPNRRPSAQELLNHPWVI 303
           +S   K LI +LL  +P +R +  E +NHPW++
Sbjct: 294 VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM 326

>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer Length = 406

Iteration: 1
 Score =  149 bits (375), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 121/213 (56%), Gaps = 12/213 (5%)
Query: 102 PNVIDLYDVYED----QNGVHLILELCSGGELFDRIV--AQERYMEVGAAAVIRQIAEGL 155
           P+++ + DVYE+    +  + +++E   GGELF RI     + + E  A+ +++ I E +
Sbjct: 121 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 180
Query: 156 AALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEA 215
             LH  NI HRD+KPEN L+ + R ++ LK+ DFG +      + +     +  YV+PE 
Sbjct: 181 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 240
Query: 216 LLQDRITSKSDMWSLGVILYILLSGYPPF-----IAQSNRQKQQMIMAGEFSFYEQTWKN 270
           L  ++     DMWSLGVI+YILL GYPPF     +A S   K ++ M G++ F    W  
Sbjct: 241 LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM-GQYEFPNPEWSE 299
Query: 271 ISSSAKQLISSLLTVDPNRRPSAQELLNHPWVI 303
           +S   K LI +LL  +P +R +  E +NHPW++
Sbjct: 300 VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM 332

>pdb|2OZA|A Chain A, Structure Of P38alpha Complex Length = 356

Iteration: 1
 Score =  149 bits (375), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 121/213 (56%), Gaps = 12/213 (5%)
Query: 102 PNVIDLYDVYED----QNGVHLILELCSGGELFDRIV--AQERYMEVGAAAVIRQIAEGL 155
           P+++ + DVYE+    +  + +++E   GGELF RI     + + E  A+ +++ I E +
Sbjct: 71  PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 130
Query: 156 AALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEA 215
             LH  NI HRD+KPEN L+ + R ++ LK+ DFG +      + +     +  YV+PE 
Sbjct: 131 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 190
Query: 216 LLQDRITSKSDMWSLGVILYILLSGYPPF-----IAQSNRQKQQMIMAGEFSFYEQTWKN 270
           L  ++     DMWSLGVI+YILL GYPPF     +A S   K ++ M G++ F    W  
Sbjct: 191 LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM-GQYEFPNPEWSE 249
Query: 271 ISSSAKQLISSLLTVDPNRRPSAQELLNHPWVI 303
           +S   K LI +LL  +P +R +  E +NHPW++
Sbjct: 250 VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM 282

>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1 Length = 319

Iteration: 1
 Score =  148 bits (374), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 121/213 (56%), Gaps = 12/213 (5%)
Query: 102 PNVIDLYDVYED----QNGVHLILELCSGGELFDRIV--AQERYMEVGAAAVIRQIAEGL 155
           P+++ + DVYE+    +  + +++E   GGELF RI     + + E  A+ +++ I E +
Sbjct: 70  PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 129
Query: 156 AALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEA 215
             LH  NI HRD+KPEN L+ + R ++ LK+ DFG +      + +     +  YV+PE 
Sbjct: 130 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 189
Query: 216 LLQDRITSKSDMWSLGVILYILLSGYPPF-----IAQSNRQKQQMIMAGEFSFYEQTWKN 270
           L  ++     DMWSLGVI+YILL GYPPF     +A S   K ++ M G++ F    W  
Sbjct: 190 LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM-GQYEFPNPEWSE 248
Query: 271 ISSSAKQLISSLLTVDPNRRPSAQELLNHPWVI 303
           +S   K LI +LL  +P +R +  E +NHPW++
Sbjct: 249 VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM 281

>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To Mapkap Kinase-2 Length = 327

Iteration: 1
 Score =  148 bits (374), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 121/213 (56%), Gaps = 12/213 (5%)
Query: 102 PNVIDLYDVYED----QNGVHLILELCSGGELFDRIV--AQERYMEVGAAAVIRQIAEGL 155
           P+++ + DVYE+    +  + +++E   GGELF RI     + + E  A+ +++ I E +
Sbjct: 71  PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 130
Query: 156 AALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEA 215
             LH  NI HRD+KPEN L+ + R ++ LK+ DFG +      + +     +  YV+PE 
Sbjct: 131 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 190
Query: 216 LLQDRITSKSDMWSLGVILYILLSGYPPF-----IAQSNRQKQQMIMAGEFSFYEQTWKN 270
           L  ++     DMWSLGVI+YILL GYPPF     +A S   K ++ M G++ F    W  
Sbjct: 191 LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM-GQYEFPNPEWSE 249
Query: 271 ISSSAKQLISSLLTVDPNRRPSAQELLNHPWVI 303
           +S   K LI +LL  +P +R +  E +NHPW++
Sbjct: 250 VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM 282

>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap Kinase-2 Length = 325

Iteration: 1
 Score =  148 bits (374), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 121/213 (56%), Gaps = 12/213 (5%)
Query: 102 PNVIDLYDVYED----QNGVHLILELCSGGELFDRIV--AQERYMEVGAAAVIRQIAEGL 155
           P+++ + DVYE+    +  + +++E   GGELF RI     + + E  A+ +++ I E +
Sbjct: 76  PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 135
Query: 156 AALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEA 215
             LH  NI HRD+KPEN L+ + R ++ LK+ DFG +      + +     +  YV+PE 
Sbjct: 136 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 195
Query: 216 LLQDRITSKSDMWSLGVILYILLSGYPPF-----IAQSNRQKQQMIMAGEFSFYEQTWKN 270
           L  ++     DMWSLGVI+YILL GYPPF     +A S   K ++ M G++ F    W  
Sbjct: 196 LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM-GQYEFPNPEWSE 254
Query: 271 ISSSAKQLISSLLTVDPNRRPSAQELLNHPWVI 303
           +S   K LI +LL  +P +R +  E +NHPW++
Sbjct: 255 VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM 287

>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76 Length = 324

Iteration: 1
 Score =  148 bits (374), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 121/213 (56%), Gaps = 12/213 (5%)
Query: 102 PNVIDLYDVYED----QNGVHLILELCSGGELFDRIV--AQERYMEVGAAAVIRQIAEGL 155
           P+++ + DVYE+    +  + +++E   GGELF RI     + + E  A+ +++ I E +
Sbjct: 75  PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 134
Query: 156 AALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEA 215
             LH  NI HRD+KPEN L+ + R ++ LK+ DFG +      + +     +  YV+PE 
Sbjct: 135 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 194
Query: 216 LLQDRITSKSDMWSLGVILYILLSGYPPF-----IAQSNRQKQQMIMAGEFSFYEQTWKN 270
           L  ++     DMWSLGVI+YILL GYPPF     +A S   K ++ M G++ F    W  
Sbjct: 195 LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM-GQYEFPNPEWSE 253
Query: 271 ISSSAKQLISSLLTVDPNRRPSAQELLNHPWVI 303
           +S   K LI +LL  +P +R +  E +NHPW++
Sbjct: 254 VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM 286

>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b Length = 318

Iteration: 1
 Score =  148 bits (374), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 121/213 (56%), Gaps = 12/213 (5%)
Query: 102 PNVIDLYDVYED----QNGVHLILELCSGGELFDRIV--AQERYMEVGAAAVIRQIAEGL 155
           P+++ + DVYE+    +  + +++E   GGELF RI     + + E  A+ +++ I E +
Sbjct: 69  PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 128
Query: 156 AALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEA 215
             LH  NI HRD+KPEN L+ + R ++ LK+ DFG +      + +     +  YV+PE 
Sbjct: 129 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 188
Query: 216 LLQDRITSKSDMWSLGVILYILLSGYPPF-----IAQSNRQKQQMIMAGEFSFYEQTWKN 270
           L  ++     DMWSLGVI+YILL GYPPF     +A S   K ++ M G++ F    W  
Sbjct: 189 LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM-GQYEFPNPEWSE 247
Query: 271 ISSSAKQLISSLLTVDPNRRPSAQELLNHPWVI 303
           +S   K LI +LL  +P +R +  E +NHPW++
Sbjct: 248 VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM 280

>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands Length = 334

Iteration: 1
 Score =  148 bits (374), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 121/213 (56%), Gaps = 12/213 (5%)
Query: 102 PNVIDLYDVYED----QNGVHLILELCSGGELFDRIV--AQERYMEVGAAAVIRQIAEGL 155
           P+++ + DVYE+    +  + +++E   GGELF RI     + + E  A+ +++ I E +
Sbjct: 85  PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 144
Query: 156 AALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEA 215
             LH  NI HRD+KPEN L+ + R ++ LK+ DFG +      + +     +  YV+PE 
Sbjct: 145 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 204
Query: 216 LLQDRITSKSDMWSLGVILYILLSGYPPF-----IAQSNRQKQQMIMAGEFSFYEQTWKN 270
           L  ++     DMWSLGVI+YILL GYPPF     +A S   K ++ M G++ F    W  
Sbjct: 205 LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM-GQYEFPNPEWSE 263
Query: 271 ISSSAKQLISSLLTVDPNRRPSAQELLNHPWVI 303
           +S   K LI +LL  +P +R +  E +NHPW++
Sbjct: 264 VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM 296

>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal Form-1, Soaking) Length = 326

Iteration: 1
 Score =  148 bits (374), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 121/213 (56%), Gaps = 12/213 (5%)
Query: 102 PNVIDLYDVYED----QNGVHLILELCSGGELFDRIV--AQERYMEVGAAAVIRQIAEGL 155
           P+++ + DVYE+    +  + +++E   GGELF RI     + + E  A+ +++ I E +
Sbjct: 77  PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 136
Query: 156 AALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEA 215
             LH  NI HRD+KPEN L+ + R ++ LK+ DFG +      + +     +  YV+PE 
Sbjct: 137 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 196
Query: 216 LLQDRITSKSDMWSLGVILYILLSGYPPF-----IAQSNRQKQQMIMAGEFSFYEQTWKN 270
           L  ++     DMWSLGVI+YILL GYPPF     +A S   K ++ M G++ F    W  
Sbjct: 197 LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM-GQYEFPNPEWSE 255
Query: 271 ISSSAKQLISSLLTVDPNRRPSAQELLNHPWVI 303
           +S   K LI +LL  +P +R +  E +NHPW++
Sbjct: 256 VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM 288

>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle Protein Titin Length = 321

Iteration: 1
 Score =  148 bits (373), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 93/299 (31%), Positives = 154/299 (51%), Gaps = 40/299 (13%)
Query: 6   RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXX 65
           ++L ++Y + + LGRG F +V R     C ET+           S   Y           
Sbjct: 1   KELYEKYMIAEDLGRGEFGIVHR-----CVETS-----------SKKTY----------- 33
Query: 66  XQIGFFPTRKQVSVSDALLTNEILVMRKI-VENVSPHPNVIDLYDVYEDQNGVHLILELC 124
                    K V V     T+++LV ++I + N++ H N++ L++ +E    + +I E  
Sbjct: 34  -------MAKFVKVKG---TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFI 83
Query: 125 SGGELFDRI-VAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSP 183
           SG ++F+RI  +     E    + + Q+ E L  LH  NI H D++PEN ++   R  S 
Sbjct: 84  SGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIY-QTRRSST 142
Query: 184 LKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPP 243
           +KI++FG +      D    LF + +Y +PE    D +++ +DMWSLG ++Y+LLSG  P
Sbjct: 143 IKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINP 202
Query: 244 FIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
           F+A++N+Q  + IM  E++F E+ +K IS  A   +  LL  +   R +A E L HPW+
Sbjct: 203 FLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWL 261

>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491

Iteration: 1
 Score =  147 bits (372), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 92/299 (30%), Positives = 147/299 (49%), Gaps = 37/299 (12%)
Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIG 69
           D Y++ + LG G F VV R  ++  G  N  A K +      TP+               
Sbjct: 51  DHYDIHEELGTGAFGVVHRVTERATG--NNFAAKFV-----MTPH--------------- 88
Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
                         +  EI  M     +V  HP +++L+D +ED N + +I E  SGGEL
Sbjct: 89  --------ESDKETVRKEIQTM-----SVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGEL 135
Query: 130 FDRIVAQERYM-EVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMD 188
           F+++  +   M E  A   +RQ+ +GL  +H+ N VH DLKPEN +F   R +  LK++D
Sbjct: 136 FEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNE-LKLID 194
Query: 189 FGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQS 248
           FGL++       V    G+ ++ +PE      +   +DMWS+GV+ YILLSG  PF  ++
Sbjct: 195 FGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEN 254
Query: 249 NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSA 307
           + +  + + + +++  +  +  IS   K  I  LL  DPN R +  + L HPW+   +A
Sbjct: 255 DDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNA 313

>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573

Iteration: 1
 Score =  147 bits (370), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 92/299 (30%), Positives = 147/299 (49%), Gaps = 37/299 (12%)
Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIG 69
           D Y++ + LG G F VV R  ++  G  N  A K +      TP+               
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATG--NNFAAKFV-----MTPH--------------- 194
Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
                         +  EI  M     +V  HP +++L+D +ED N + +I E  SGGEL
Sbjct: 195 --------ESDKETVRKEIQTM-----SVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGEL 241
Query: 130 FDRIVAQERYM-EVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMD 188
           F+++  +   M E  A   +RQ+ +GL  +H+ N VH DLKPEN +F   R +  LK++D
Sbjct: 242 FEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNE-LKLID 300
Query: 189 FGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQS 248
           FGL++       V    G+ ++ +PE      +   +DMWS+GV+ YILLSG  PF  ++
Sbjct: 301 FGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEN 360
Query: 249 NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSA 307
           + +  + + + +++  +  +  IS   K  I  LL  DPN R +  + L HPW+   +A
Sbjct: 361 DDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNA 419

>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307

Iteration: 1
 Score =  146 bits (369), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 87/235 (37%), Positives = 127/235 (54%), Gaps = 28/235 (11%)
Query: 103 NVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQAN 162
           N+++L + +ED    +L+ E   GG +   I  Q+ + E  A+ V+R +A  L  LH   
Sbjct: 72  NILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKG 131
Query: 163 IVHRDLKPENCLFLNDREDSPLKIMDFGL-------SSVEGYTDP-VVGLFGSIDYVSPE 214
           I HRDLKPEN L  +  + SP+KI DF L       +S    T P +    GS +Y++PE
Sbjct: 132 IAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPE 191
Query: 215 A--LLQDRIT---SKSDMWSLGVILYILLSGYPPFIAQSN-----------RQKQ----Q 254
              +  D+ T    + D+WSLGV+LYI+LSGYPPF+               R  Q    +
Sbjct: 192 VVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFE 251
Query: 255 MIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAKE 309
            I  G++ F ++ W +ISS AK LIS LL  D  +R SA ++L HPWV G + ++
Sbjct: 252 SIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWVQGQAPEK 306

>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365

Iteration: 1
 Score =  146 bits (368), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 92/303 (30%), Positives = 151/303 (49%), Gaps = 35/303 (11%)
Query: 5   TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXX 64
            ++   +Y+  D++GRG  SVVRR + +  G  ++ A+K +                   
Sbjct: 89  AKEFYQKYDPKDVIGRGVSSVVRRCVHRATG--HEFAVKIMEVTAERL------------ 134
Query: 65  XXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELC 124
                   + +Q+         E  ++R+    V+ HP++I L D YE  + + L+ +L 
Sbjct: 135 --------SPEQLEEVREATRRETHILRQ----VAGHPHIITLIDSYESSSFMFLVFDLM 182
Query: 125 SGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPL 184
             GELFD +  +    E    +++R + E ++ LH  NIVHRDLKPEN L  ++ +   +
Sbjct: 183 RKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQ---I 239
Query: 185 KIMDFGLSSVEGYTDPVVGLFGSIDYVSPEAL------LQDRITSKSDMWSLGVILYILL 238
           ++ DFG S      + +  L G+  Y++PE L             + D+W+ GVIL+ LL
Sbjct: 240 RLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLL 299
Query: 239 SGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN 298
           +G PPF  +      +MIM G++ F    W + SS+ K LIS LL VDP  R +A++ L 
Sbjct: 300 AGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQ 359
Query: 299 HPW 301
           HP+
Sbjct: 360 HPF 362

>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2 Length = 400

Iteration: 1
 Score =  141 bits (355), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 73/211 (34%), Positives = 112/211 (53%), Gaps = 10/211 (4%)
Query: 102 PNVIDLYDVYED----QNGVHLILELCSGGELFDRIV--AQERYMEVGAAAVIRQIAEGL 155
           P+++ + DVYE+    +  + ++ E   GGELF RI     + + E  A+ + + I E +
Sbjct: 115 PHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAI 174
Query: 156 AALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEA 215
             LH  NI HRD+KPEN L+ + R ++ LK+ DFG +      + +     +  YV+PE 
Sbjct: 175 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 234
Query: 216 LLQDRITSKSDMWSLGVILYILLSGYPPFIAQS----NRQKQQMIMAGEFSFYEQTWKNI 271
           L  ++     D WSLGVI YILL GYPPF +      +   +  I  G++ F    W  +
Sbjct: 235 LGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQYEFPNPEWSEV 294
Query: 272 SSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
           S   K LI +LL  +P +R +  E  NHPW+
Sbjct: 295 SEEVKXLIRNLLKTEPTQRXTITEFXNHPWI 325

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score =  140 bits (352), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 76/208 (36%), Positives = 116/208 (55%), Gaps = 8/208 (3%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HPN++ LY  + D   V+LILE    GE++  +    ++ E   A  I ++A  L+  H 
Sbjct: 72  HPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHS 131
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDR 220
             ++HRD+KPEN L  +  E   LKI DFG  SV   +     L G++DY+ PE +    
Sbjct: 132 KRVIHRDIKPENLLLGSAGE---LKIADFGW-SVHAPSSRRTTLCGTLDYLPPEMIEGRM 187
Query: 221 ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLIS 280
              K D+WSLGV+ Y  L G PPF A + ++  + I   EF+F +     ++  A+ LIS
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLIS 243
Query: 281 SLLTVDPNRRPSAQELLNHPWVIGDSAK 308
            LL  +P++RP  +E+L HPW+  +S+K
Sbjct: 244 RLLKHNPSQRPMLREVLEHPWITANSSK 271

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score =  139 bits (351), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 76/208 (36%), Positives = 116/208 (55%), Gaps = 8/208 (3%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HPN++ LY  + D   V+LILE    GE++  +    ++ E   A  I ++A  L+  H 
Sbjct: 72  HPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHS 131
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDR 220
             ++HRD+KPEN L  +  E   LKI DFG  SV   +     L G++DY+ PE +    
Sbjct: 132 KRVIHRDIKPENLLLGSAGE---LKIADFGW-SVHAPSSRRXXLXGTLDYLPPEMIEGRM 187
Query: 221 ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLIS 280
              K D+WSLGV+ Y  L G PPF A + ++  + I   EF+F +     ++  A+ LIS
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLIS 243
Query: 281 SLLTVDPNRRPSAQELLNHPWVIGDSAK 308
            LL  +P++RP  +E+L HPW+  +S+K
Sbjct: 244 RLLKHNPSQRPMLREVLEHPWITANSSK 271

>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316

Iteration: 1
 Score =  138 bits (347), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 88/235 (37%), Positives = 129/235 (54%), Gaps = 34/235 (14%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           H NV++L + +E+++  +L+ E   GG +   I  +  + E+ A+ V++ +A  L  LH 
Sbjct: 70  HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHN 129
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS---VEGYTDPV-----VGLFGSIDYVS 212
             I HRDLKPEN L  +  + SP+KI DFGL S   + G   P+     +   GS +Y++
Sbjct: 130 KGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMA 189
Query: 213 P--------EALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNR-----------QKQ 253
           P        EA + D+   + D+WSLGVILYILLSGYPPF+ +                Q
Sbjct: 190 PEVVEAFSEEASIYDK---RCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQ 246
Query: 254 QM----IMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIG 304
            M    I  G++ F ++ W +IS +AK LIS LL  D  +R SA ++L HPWV G
Sbjct: 247 NMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQG 301

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score =  137 bits (346), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 75/208 (36%), Positives = 115/208 (55%), Gaps = 8/208 (3%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HPN++ LY  + D   V+LILE    G ++  +    ++ E   A  I ++A  L+  H 
Sbjct: 72  HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 131
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDR 220
             ++HRD+KPEN L  +  E   LKI DFG  SV   +     L G++DY+ PE +    
Sbjct: 132 KRVIHRDIKPENLLLGSAGE---LKIADFGW-SVHAPSSRRTTLCGTLDYLPPEXIEGRX 187
Query: 221 ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLIS 280
              K D+WSLGV+ Y  L G PPF A + ++  + I   EF+F +     ++  A+ LIS
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLIS 243
Query: 281 SLLTVDPNRRPSAQELLNHPWVIGDSAK 308
            LL  +P++RP  +E+L HPW+  +S+K
Sbjct: 244 RLLKHNPSQRPXLREVLEHPWITANSSK 271

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score =  137 bits (344), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 75/208 (36%), Positives = 115/208 (55%), Gaps = 8/208 (3%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HPN++ LY  + D   V+LILE    G ++  +    ++ E   A  I ++A  L+  H 
Sbjct: 70  HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDR 220
             ++HRD+KPEN L  +  E   LKI DFG  SV   +     L G++DY+ PE +    
Sbjct: 130 KRVIHRDIKPENLLLGSAGE---LKIADFGW-SVHAPSSRRAALCGTLDYLPPEMIEGRM 185
Query: 221 ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLIS 280
              K D+WSLGV+ Y  L G PPF A + ++  + I   EF+F +     ++  A+ LIS
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLIS 241
Query: 281 SLLTVDPNRRPSAQELLNHPWVIGDSAK 308
            LL  +P++RP  +E+L HPW+  +S+K
Sbjct: 242 RLLKHNPSQRPMLREVLEHPWITANSSK 269

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score =  137 bits (344), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 75/208 (36%), Positives = 115/208 (55%), Gaps = 8/208 (3%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HPN++ LY  + D   V+LILE    G ++  +    ++ E   A  I ++A  L+  H 
Sbjct: 84  HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 143
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDR 220
             ++HRD+KPEN L  +  E   LKI DFG  SV   +     L G++DY+ PE +    
Sbjct: 144 KRVIHRDIKPENLLLGSAGE---LKIADFGW-SVHAPSSRRTTLCGTLDYLPPEMIEGRM 199
Query: 221 ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLIS 280
              K D+WSLGV+ Y  L G PPF A + ++  + I   EF+F +     ++  A+ LIS
Sbjct: 200 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLIS 255
Query: 281 SLLTVDPNRRPSAQELLNHPWVIGDSAK 308
            LL  +P++RP  +E+L HPW+  +S+K
Sbjct: 256 RLLKHNPSQRPMLREVLEHPWITANSSK 283

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score =  137 bits (344), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 75/208 (36%), Positives = 115/208 (55%), Gaps = 8/208 (3%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HPN++ LY  + D   V+LILE    G ++  +    ++ E   A  I ++A  L+  H 
Sbjct: 93  HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 152
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDR 220
             ++HRD+KPEN L  +  E   LKI DFG  SV   +     L G++DY+ PE +    
Sbjct: 153 KRVIHRDIKPENLLLGSAGE---LKIADFGW-SVHAPSSRRTTLCGTLDYLPPEMIEGRM 208
Query: 221 ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLIS 280
              K D+WSLGV+ Y  L G PPF A + ++  + I   EF+F +     ++  A+ LIS
Sbjct: 209 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLIS 264
Query: 281 SLLTVDPNRRPSAQELLNHPWVIGDSAK 308
            LL  +P++RP  +E+L HPW+  +S+K
Sbjct: 265 RLLKHNPSQRPMLREVLEHPWITANSSK 292

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score =  136 bits (343), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 75/208 (36%), Positives = 115/208 (55%), Gaps = 8/208 (3%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HPN++ LY  + D   V+LILE    G ++  +    ++ E   A  I ++A  L+  H 
Sbjct: 72  HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 131
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDR 220
             ++HRD+KPEN L  +  E   LKI DFG  SV   +     L G++DY+ PE +    
Sbjct: 132 KRVIHRDIKPENLLLGSAGE---LKIADFGW-SVHAPSSRRTTLCGTLDYLPPEMIEGRM 187
Query: 221 ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLIS 280
              K D+WSLGV+ Y  L G PPF A + ++  + I   EF+F +     ++  A+ LIS
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLIS 243
Query: 281 SLLTVDPNRRPSAQELLNHPWVIGDSAK 308
            LL  +P++RP  +E+L HPW+  +S+K
Sbjct: 244 RLLKHNPSQRPMLREVLEHPWITANSSK 271

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score =  136 bits (343), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 75/208 (36%), Positives = 115/208 (55%), Gaps = 8/208 (3%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HPN++ LY  + D   V+LILE    G ++  +    ++ E   A  I ++A  L+  H 
Sbjct: 70  HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDR 220
             ++HRD+KPEN L  +  E   LKI DFG  SV   +     L G++DY+ PE +    
Sbjct: 130 KRVIHRDIKPENLLLGSAGE---LKIADFGW-SVHAPSSRRTTLCGTLDYLPPEMIEGRM 185
Query: 221 ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLIS 280
              K D+WSLGV+ Y  L G PPF A + ++  + I   EF+F +     ++  A+ LIS
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLIS 241
Query: 281 SLLTVDPNRRPSAQELLNHPWVIGDSAK 308
            LL  +P++RP  +E+L HPW+  +S+K
Sbjct: 242 RLLKHNPSQRPMLREVLEHPWITANSSK 269

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score =  136 bits (343), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 75/208 (36%), Positives = 115/208 (55%), Gaps = 8/208 (3%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HPN++ LY  + D   V+LILE    G ++  +    ++ E   A  I ++A  L+  H 
Sbjct: 68  HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 127
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDR 220
             ++HRD+KPEN L  +  E   LKI DFG  SV   +     L G++DY+ PE +    
Sbjct: 128 KRVIHRDIKPENLLLGSAGE---LKIADFGW-SVHAPSSRRTDLCGTLDYLPPEMIEGRM 183
Query: 221 ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLIS 280
              K D+WSLGV+ Y  L G PPF A + ++  + I   EF+F +     ++  A+ LIS
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLIS 239
Query: 281 SLLTVDPNRRPSAQELLNHPWVIGDSAK 308
            LL  +P++RP  +E+L HPW+  +S+K
Sbjct: 240 RLLKHNPSQRPMLREVLEHPWITANSSK 267

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score =  136 bits (343), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 75/208 (36%), Positives = 115/208 (55%), Gaps = 8/208 (3%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HPN++ LY  + D   V+LILE    G ++  +    ++ E   A  I ++A  L+  H 
Sbjct: 67  HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDR 220
             ++HRD+KPEN L  +  E   LKI DFG  SV   +     L G++DY+ PE +    
Sbjct: 127 KRVIHRDIKPENLLLGSAGE---LKIADFGW-SVHAPSSRRAALCGTLDYLPPEMIEGRM 182
Query: 221 ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLIS 280
              K D+WSLGV+ Y  L G PPF A + ++  + I   EF+F +     ++  A+ LIS
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLIS 238
Query: 281 SLLTVDPNRRPSAQELLNHPWVIGDSAK 308
            LL  +P++RP  +E+L HPW+  +S+K
Sbjct: 239 RLLKHNPSQRPMLREVLEHPWITANSSK 266

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score =  136 bits (343), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 75/208 (36%), Positives = 115/208 (55%), Gaps = 8/208 (3%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HPN++ LY  + D   V+LILE    G ++  +    ++ E   A  I ++A  L+  H 
Sbjct: 70  HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDR 220
             ++HRD+KPEN L  +  E   LKI DFG  SV   +     L G++DY+ PE +    
Sbjct: 130 KRVIHRDIKPENLLLGSAGE---LKIADFGW-SVHAPSSRRTTLCGTLDYLPPEMIEGRM 185
Query: 221 ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLIS 280
              K D+WSLGV+ Y  L G PPF A + ++  + I   EF+F +     ++  A+ LIS
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLIS 241
Query: 281 SLLTVDPNRRPSAQELLNHPWVIGDSAK 308
            LL  +P++RP  +E+L HPW+  +S+K
Sbjct: 242 RLLKHNPSQRPMLREVLEHPWITANSSK 269

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score =  136 bits (342), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 75/208 (36%), Positives = 115/208 (55%), Gaps = 8/208 (3%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HPN++ LY  + D   V+LILE    G ++  +    ++ E   A  I ++A  L+  H 
Sbjct: 72  HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 131
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDR 220
             ++HRD+KPEN L  +  E   LKI DFG  SV   +     L G++DY+ PE +    
Sbjct: 132 KRVIHRDIKPENLLLGSAGE---LKIADFGW-SVHAPSSRRTDLCGTLDYLPPEMIEGRM 187
Query: 221 ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLIS 280
              K D+WSLGV+ Y  L G PPF A + ++  + I   EF+F +     ++  A+ LIS
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLIS 243
Query: 281 SLLTVDPNRRPSAQELLNHPWVIGDSAK 308
            LL  +P++RP  +E+L HPW+  +S+K
Sbjct: 244 RLLKHNPSQRPMLREVLEHPWITANSSK 271

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score =  136 bits (342), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 75/208 (36%), Positives = 115/208 (55%), Gaps = 8/208 (3%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HPN++ LY  + D   V+LILE    G ++  +    ++ E   A  I ++A  L+  H 
Sbjct: 67  HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDR 220
             ++HRD+KPEN L  +  E   LKI DFG  SV   +     L G++DY+ PE +    
Sbjct: 127 KRVIHRDIKPENLLLGSAGE---LKIADFGW-SVHAPSSRRTTLCGTLDYLPPEMIEGRM 182
Query: 221 ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLIS 280
              K D+WSLGV+ Y  L G PPF A + ++  + I   EF+F +     ++  A+ LIS
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLIS 238
Query: 281 SLLTVDPNRRPSAQELLNHPWVIGDSAK 308
            LL  +P++RP  +E+L HPW+  +S+K
Sbjct: 239 RLLKHNPSQRPMLREVLEHPWITANSSK 266

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score =  136 bits (342), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 75/208 (36%), Positives = 115/208 (55%), Gaps = 8/208 (3%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HPN++ LY  + D   V+LILE    G ++  +    ++ E   A  I ++A  L+  H 
Sbjct: 67  HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDR 220
             ++HRD+KPEN L  +  E   LKI DFG  SV   +     L G++DY+ PE +    
Sbjct: 127 KRVIHRDIKPENLLLGSAGE---LKIADFGW-SVHAPSSRRTDLCGTLDYLPPEMIEGRM 182
Query: 221 ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLIS 280
              K D+WSLGV+ Y  L G PPF A + ++  + I   EF+F +     ++  A+ LIS
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLIS 238
Query: 281 SLLTVDPNRRPSAQELLNHPWVIGDSAK 308
            LL  +P++RP  +E+L HPW+  +S+K
Sbjct: 239 RLLKHNPSQRPMLREVLEHPWITANSSK 266

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score =  136 bits (342), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 75/208 (36%), Positives = 115/208 (55%), Gaps = 8/208 (3%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HPN++ LY  + D   V+LILE    G ++  +    ++ E   A  I ++A  L+  H 
Sbjct: 67  HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDR 220
             ++HRD+KPEN L  +  E   LKI DFG  SV   +     L G++DY+ PE +    
Sbjct: 127 KRVIHRDIKPENLLLGSAGE---LKIADFGW-SVHAPSSRRTDLCGTLDYLPPEMIEGRM 182
Query: 221 ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLIS 280
              K D+WSLGV+ Y  L G PPF A + ++  + I   EF+F +     ++  A+ LIS
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLIS 238
Query: 281 SLLTVDPNRRPSAQELLNHPWVIGDSAK 308
            LL  +P++RP  +E+L HPW+  +S+K
Sbjct: 239 RLLKHNPSQRPMLREVLEHPWITANSSK 266

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score =  136 bits (342), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 75/208 (36%), Positives = 115/208 (55%), Gaps = 8/208 (3%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HPN++ LY  + D   V+LILE    G ++  +    ++ E   A  I ++A  L+  H 
Sbjct: 66  HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 125
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDR 220
             ++HRD+KPEN L  +  E   LKI DFG  SV   +     L G++DY+ PE +    
Sbjct: 126 KRVIHRDIKPENLLLGSAGE---LKIADFGW-SVHAPSSRRTTLCGTLDYLPPEMIEGRM 181
Query: 221 ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLIS 280
              K D+WSLGV+ Y  L G PPF A + ++  + I   EF+F +     ++  A+ LIS
Sbjct: 182 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLIS 237
Query: 281 SLLTVDPNRRPSAQELLNHPWVIGDSAK 308
            LL  +P++RP  +E+L HPW+  +S+K
Sbjct: 238 RLLKHNPSQRPMLREVLEHPWITANSSK 265

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score =  136 bits (342), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 75/208 (36%), Positives = 115/208 (55%), Gaps = 8/208 (3%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HPN++ LY  + D   V+LILE    G ++  +    ++ E   A  I ++A  L+  H 
Sbjct: 71  HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 130
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDR 220
             ++HRD+KPEN L  +  E   LKI DFG  SV   +     L G++DY+ PE +    
Sbjct: 131 KRVIHRDIKPENLLLGSAGE---LKIADFGW-SVHAPSSRRTTLCGTLDYLPPEMIEGRM 186
Query: 221 ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLIS 280
              K D+WSLGV+ Y  L G PPF A + ++  + I   EF+F +     ++  A+ LIS
Sbjct: 187 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLIS 242
Query: 281 SLLTVDPNRRPSAQELLNHPWVIGDSAK 308
            LL  +P++RP  +E+L HPW+  +S+K
Sbjct: 243 RLLKHNPSQRPMLREVLEHPWITANSSK 270

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score =  136 bits (342), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 75/208 (36%), Positives = 115/208 (55%), Gaps = 8/208 (3%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HPN++ LY  + D   V+LILE    G ++  +    ++ E   A  I ++A  L+  H 
Sbjct: 67  HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDR 220
             ++HRD+KPEN L  +  E   LKI DFG  SV   +     L G++DY+ PE +    
Sbjct: 127 KRVIHRDIKPENLLLGSAGE---LKIADFGW-SVHAPSSRRTELCGTLDYLPPEMIEGRM 182
Query: 221 ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLIS 280
              K D+WSLGV+ Y  L G PPF A + ++  + I   EF+F +     ++  A+ LIS
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLIS 238
Query: 281 SLLTVDPNRRPSAQELLNHPWVIGDSAK 308
            LL  +P++RP  +E+L HPW+  +S+K
Sbjct: 239 RLLKHNPSQRPMLREVLEHPWITANSSK 266

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score =  136 bits (342), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 75/208 (36%), Positives = 115/208 (55%), Gaps = 8/208 (3%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HPN++ LY  + D   V+LILE    G ++  +    ++ E   A  I ++A  L+  H 
Sbjct: 69  HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 128
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDR 220
             ++HRD+KPEN L  +  E   LKI DFG  SV   +     L G++DY+ PE +    
Sbjct: 129 KRVIHRDIKPENLLLGSAGE---LKIADFGW-SVHAPSSRRXXLCGTLDYLPPEMIEGRM 184
Query: 221 ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLIS 280
              K D+WSLGV+ Y  L G PPF A + ++  + I   EF+F +     ++  A+ LIS
Sbjct: 185 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLIS 240
Query: 281 SLLTVDPNRRPSAQELLNHPWVIGDSAK 308
            LL  +P++RP  +E+L HPW+  +S+K
Sbjct: 241 RLLKHNPSQRPMLREVLEHPWITANSSK 268

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score =  136 bits (342), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 75/208 (36%), Positives = 114/208 (54%), Gaps = 8/208 (3%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HPN++ LY  + D   V+LILE    G ++  +    ++ E   A  I ++A  L+  H 
Sbjct: 67  HPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDR 220
             ++HRD+KPEN L  +  E   LKI DFG  SV   +     L G++DY+ PE +    
Sbjct: 127 KKVIHRDIKPENLLLGSAGE---LKIADFGW-SVHAPSSRRAALCGTLDYLPPEMIEGRM 182
Query: 221 ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLIS 280
              K D+WSLGV+ Y  L G PPF A + +   + I   EF+F +     ++  A+ LIS
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPD----FVTEGARDLIS 238
Query: 281 SLLTVDPNRRPSAQELLNHPWVIGDSAK 308
            LL  +P++RP  +E+L HPW+  +S+K
Sbjct: 239 RLLKHNPSQRPMLREVLEHPWITANSSK 266

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score =  135 bits (341), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 75/208 (36%), Positives = 115/208 (55%), Gaps = 8/208 (3%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HPN++ LY  + D   V+LILE    G ++  +    ++ E   A  I ++A  L+  H 
Sbjct: 67  HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDR 220
             ++HRD+KPEN L  +  E   LKI DFG  SV   +     L G++DY+ PE +    
Sbjct: 127 KRVIHRDIKPENLLLGSAGE---LKIADFGW-SVHAPSSRRTXLCGTLDYLPPEMIEGRM 182
Query: 221 ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLIS 280
              K D+WSLGV+ Y  L G PPF A + ++  + I   EF+F +     ++  A+ LIS
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLIS 238
Query: 281 SLLTVDPNRRPSAQELLNHPWVIGDSAK 308
            LL  +P++RP  +E+L HPW+  +S+K
Sbjct: 239 RLLKHNPSQRPMLREVLEHPWITANSSK 266

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score =  135 bits (341), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 75/208 (36%), Positives = 115/208 (55%), Gaps = 8/208 (3%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HPN++ LY  + D   V+LILE    G ++  +    ++ E   A  I ++A  L+  H 
Sbjct: 70  HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDR 220
             ++HRD+KPEN L  +  E   LKI DFG  SV   +     L G++DY+ PE +    
Sbjct: 130 KRVIHRDIKPENLLLGSAGE---LKIADFGW-SVHAPSSRRXXLCGTLDYLPPEMIEGRM 185
Query: 221 ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLIS 280
              K D+WSLGV+ Y  L G PPF A + ++  + I   EF+F +     ++  A+ LIS
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLIS 241
Query: 281 SLLTVDPNRRPSAQELLNHPWVIGDSAK 308
            LL  +P++RP  +E+L HPW+  +S+K
Sbjct: 242 RLLKHNPSQRPMLREVLEHPWITANSSK 269

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score =  135 bits (340), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 75/208 (36%), Positives = 115/208 (55%), Gaps = 8/208 (3%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HPN++ LY  + D   V+LILE    G ++  +    ++ E   A  I ++A  L+  H 
Sbjct: 67  HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDR 220
             ++HRD+KPEN L  +  E   LKI DFG  SV   +     L G++DY+ PE +    
Sbjct: 127 KRVIHRDIKPENLLLGSAGE---LKIADFGW-SVHAPSSRRXXLCGTLDYLPPEMIEGRM 182
Query: 221 ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLIS 280
              K D+WSLGV+ Y  L G PPF A + ++  + I   EF+F +     ++  A+ LIS
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLIS 238
Query: 281 SLLTVDPNRRPSAQELLNHPWVIGDSAK 308
            LL  +P++RP  +E+L HPW+  +S+K
Sbjct: 239 RLLKHNPSQRPMLREVLEHPWITANSSK 266

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score =  135 bits (340), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 75/208 (36%), Positives = 115/208 (55%), Gaps = 8/208 (3%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HPN++ LY  + D   V+LILE    G ++  +    ++ E   A  I ++A  L+  H 
Sbjct: 68  HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 127
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDR 220
             ++HRD+KPEN L  +  E   LKI DFG  SV   +     L G++DY+ PE +    
Sbjct: 128 KRVIHRDIKPENLLLGSAGE---LKIADFGW-SVHAPSSRRDTLCGTLDYLPPEMIEGRM 183
Query: 221 ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLIS 280
              K D+WSLGV+ Y  L G PPF A + ++  + I   EF+F +     ++  A+ LIS
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLIS 239
Query: 281 SLLTVDPNRRPSAQELLNHPWVIGDSAK 308
            LL  +P++RP  +E+L HPW+  +S+K
Sbjct: 240 RLLKHNPSQRPMLREVLEHPWITANSSK 267

>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain Length = 316

Iteration: 1
 Score =  135 bits (339), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 87/235 (37%), Positives = 128/235 (54%), Gaps = 34/235 (14%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           H NV++L + +E+++  +L+ E   GG +   I  +  + E+ A+ V++ +A  L  LH 
Sbjct: 70  HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHN 129
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS---VEGYTDPV-----VGLFGSIDYVS 212
             I HRDLKPEN L  +  + SP+KI DF L S   + G   P+     +   GS +Y++
Sbjct: 130 KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMA 189
Query: 213 P--------EALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQ-----------KQ 253
           P        EA + D+   + D+WSLGVILYILLSGYPPF+ +                Q
Sbjct: 190 PEVVEAFSEEASIYDK---RCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQ 246
Query: 254 QM----IMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIG 304
            M    I  G++ F ++ W +IS +AK LIS LL  D  +R SA ++L HPWV G
Sbjct: 247 NMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQG 301

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score =  135 bits (339), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 74/208 (35%), Positives = 115/208 (55%), Gaps = 8/208 (3%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HPN++ LY  + D   V+LILE    G ++  +    ++ E   A  I ++A  L+  H 
Sbjct: 69  HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 128
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDR 220
             ++HRD+KPEN L  +  E   LKI +FG  SV   +     L G++DY+ PE +    
Sbjct: 129 KRVIHRDIKPENLLLGSAGE---LKIANFGW-SVHAPSSRRTTLCGTLDYLPPEMIEGRM 184
Query: 221 ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLIS 280
              K D+WSLGV+ Y  L G PPF A + ++  + I   EF+F +     ++  A+ LIS
Sbjct: 185 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLIS 240
Query: 281 SLLTVDPNRRPSAQELLNHPWVIGDSAK 308
            LL  +P++RP  +E+L HPW+  +S+K
Sbjct: 241 RLLKHNPSQRPMLREVLEHPWITANSSK 268

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score =  135 bits (339), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 75/208 (36%), Positives = 115/208 (55%), Gaps = 8/208 (3%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HPN++ LY  + D   V+LILE    G ++  +    ++ E   A  I ++A  L+  H 
Sbjct: 93  HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 152
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDR 220
             ++HRD+KPEN L  +  E   LKI DFG  SV   +     L G++DY+ PE +    
Sbjct: 153 KRVIHRDIKPENLLLGSAGE---LKIADFGW-SVHAPSSRRDDLCGTLDYLPPEMIEGRM 208
Query: 221 ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLIS 280
              K D+WSLGV+ Y  L G PPF A + ++  + I   EF+F +     ++  A+ LIS
Sbjct: 209 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLIS 264
Query: 281 SLLTVDPNRRPSAQELLNHPWVIGDSAK 308
            LL  +P++RP  +E+L HPW+  +S+K
Sbjct: 265 RLLKHNPSQRPMLREVLEHPWITANSSK 292

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score =  134 bits (338), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 74/208 (35%), Positives = 115/208 (55%), Gaps = 8/208 (3%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HPN++ LY  + D   V+LILE    G ++  +    ++ E   A  I ++A  L+  H 
Sbjct: 70  HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDR 220
             ++HRD+KPEN L  +  E   LKI +FG  SV   +     L G++DY+ PE +    
Sbjct: 130 KRVIHRDIKPENLLLGSAGE---LKIANFGW-SVHAPSSRRTTLCGTLDYLPPEMIEGRM 185
Query: 221 ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLIS 280
              K D+WSLGV+ Y  L G PPF A + ++  + I   EF+F +     ++  A+ LIS
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLIS 241
Query: 281 SLLTVDPNRRPSAQELLNHPWVIGDSAK 308
            LL  +P++RP  +E+L HPW+  +S+K
Sbjct: 242 RLLKHNPSQRPMLREVLEHPWITANSSK 269

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score =  134 bits (338), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 74/208 (35%), Positives = 114/208 (54%), Gaps = 8/208 (3%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HPN++ LY  + D   V+LILE    G ++  +    ++ E   A  I ++A  L+  H 
Sbjct: 68  HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 127
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDR 220
             ++HRD+KPEN L  +  E   LKI DFG  S    +     L G++DY+ PE +    
Sbjct: 128 KRVIHRDIKPENLLLGSAGE---LKIADFGW-SCHAPSSRRTTLSGTLDYLPPEMIEGRM 183
Query: 221 ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLIS 280
              K D+WSLGV+ Y  L G PPF A + ++  + I   EF+F +     ++  A+ LIS
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLIS 239
Query: 281 SLLTVDPNRRPSAQELLNHPWVIGDSAK 308
            LL  +P++RP  +E+L HPW+  +S+K
Sbjct: 240 RLLKHNPSQRPMLREVLEHPWITANSSK 267

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score =  134 bits (337), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 75/208 (36%), Positives = 115/208 (55%), Gaps = 8/208 (3%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HPN++ LY  + D   V+LILE    G ++  +    ++ E   A  I ++A  L+  H 
Sbjct: 70  HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDR 220
             ++HRD+KPEN L  +  E   LKI DFG  SV   +     L G++DY+ PE +    
Sbjct: 130 KRVIHRDIKPENLLLGSAGE---LKIADFGW-SVHAPSSRRDDLCGTLDYLPPEMIEGRM 185
Query: 221 ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLIS 280
              K D+WSLGV+ Y  L G PPF A + ++  + I   EF+F +     ++  A+ LIS
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLIS 241
Query: 281 SLLTVDPNRRPSAQELLNHPWVIGDSAK 308
            LL  +P++RP  +E+L HPW+  +S+K
Sbjct: 242 RLLKHNPSQRPMLREVLEHPWITANSSK 269

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score =  134 bits (337), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 74/207 (35%), Positives = 114/207 (55%), Gaps = 8/207 (3%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HPN++ LY  + D   V+LILE    G ++  +    ++ E   A  I ++A  L+  H 
Sbjct: 64  HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 123
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDR 220
             ++HRD+KPEN L  +  E   LKI DFG  SV   +     L G++DY+ PE +    
Sbjct: 124 KRVIHRDIKPENLLLGSAGE---LKIADFGW-SVHAPSSRRTTLCGTLDYLPPEMIEGRM 179
Query: 221 ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLIS 280
              K D+WSLGV+ Y  L G PPF A + ++  + I   EF+F +     ++  A+ LIS
Sbjct: 180 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLIS 235
Query: 281 SLLTVDPNRRPSAQELLNHPWVIGDSA 307
            LL  +P++RP  +E+L HPW+  +S+
Sbjct: 236 RLLKHNPSQRPMLREVLEHPWITANSS 262

>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With A Potent 3-Aminopyrazole Atp Site Inhibitor Length = 299

Iteration: 1
 Score =  132 bits (333), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 72/213 (33%), Positives = 113/213 (53%), Gaps = 33/213 (15%)
Query: 102 PNVIDLYDVYED----QNGVHLILELCSGGELFDRIV--AQERYMEVGAAAVIRQIAEGL 155
           P+++ + DVYE+    +  + +++E   GGELF RI     + + E  A+ +++ I E +
Sbjct: 71  PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 130
Query: 156 AALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEA 215
             LH  NI HRD+KPEN L+ + R ++ LK+ DFG +                     + 
Sbjct: 131 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA---------------------KE 169
Query: 216 LLQDRITSKSDMWSLGVILYILLSGYPPF-----IAQSNRQKQQMIMAGEFSFYEQTWKN 270
              ++     DMWSLGVI+YILL GYPPF     +A S   K ++ M G++ F    W  
Sbjct: 170 TTGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM-GQYEFPNPEWSE 228
Query: 271 ISSSAKQLISSLLTVDPNRRPSAQELLNHPWVI 303
           +S   K LI +LL  +P +R +  E +NHPW++
Sbjct: 229 VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM 261

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score =  131 bits (329), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 74/208 (35%), Positives = 114/208 (54%), Gaps = 8/208 (3%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HPN++ LY  + D   V+LILE    G ++  +    R+ E   A  I ++A  L+  H 
Sbjct: 71  HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHS 130
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDR 220
             ++HRD+KPEN L  ++ E   LKI DFG  SV   +     L G++DY+ PE +    
Sbjct: 131 KRVIHRDIKPENLLLGSNGE---LKIADFGW-SVHAPSSRRTTLCGTLDYLPPEMIEGRM 186
Query: 221 ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLIS 280
              K D+WSLGV+ Y  L G PPF A + ++  + I   EF+F +     ++  A+ LIS
Sbjct: 187 HDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPD----FVTEGARDLIS 242
Query: 281 SLLTVDPNRRPSAQELLNHPWVIGDSAK 308
            LL  + ++R +  E+L HPW+  +S+K
Sbjct: 243 RLLKHNASQRLTLAEVLEHPWIKANSSK 270

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score =  129 bits (325), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 74/208 (35%), Positives = 114/208 (54%), Gaps = 8/208 (3%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HPN++ LY  + D   V+LILE    G ++  +    R+ E   A  I ++A  L+  H 
Sbjct: 71  HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHS 130
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDR 220
             ++HRD+KPEN L  ++ E   LKI DFG  SV   +     L G++DY+ PE +    
Sbjct: 131 KRVIHRDIKPENLLLGSNGE---LKIADFGW-SVHAPSSRRDTLCGTLDYLPPEMIEGRM 186
Query: 221 ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLIS 280
              K D+WSLGV+ Y  L G PPF A + ++  + I   EF+F +     ++  A+ LIS
Sbjct: 187 HDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPD----FVTEGARDLIS 242
Query: 281 SLLTVDPNRRPSAQELLNHPWVIGDSAK 308
            LL  + ++R +  E+L HPW+  +S+K
Sbjct: 243 RLLKHNASQRLTLAEVLEHPWIKANSSK 270

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score =  129 bits (324), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 75/222 (33%), Positives = 123/222 (55%), Gaps = 17/222 (7%)
Query: 84  LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVG 143
           L  E+ +M+     V  HPN++ L++V E +  ++L++E  SGGE+FD +VA  R  E  
Sbjct: 60  LFREVRIMK-----VLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE 114
Query: 144 AAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVG 203
           A A  RQI   +   HQ  IVHRDLK EN L      D  +KI DFG S+   + + +  
Sbjct: 115 ARAKFRQIVSAVQYCHQKFIVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDT 171
Query: 204 LFGSIDYVSPEALLQDRITS-KSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEF- 261
             GS  Y +PE     +    + D+WSLGVILY L+SG  PF  Q+ ++ ++ ++ G++ 
Sbjct: 172 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR 231
Query: 262 -SFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
             FY      +S+  + L+   L ++P++R + ++++   W+
Sbjct: 232 IPFY------MSTDCENLLKKFLILNPSKRGTLEQIMKDRWM 267

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score =  129 bits (324), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 75/222 (33%), Positives = 123/222 (55%), Gaps = 17/222 (7%)
Query: 84  LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVG 143
           L  E+ +M+     V  HPN++ L++V E +  ++L++E  SGGE+FD +VA  R  E  
Sbjct: 60  LFREVRIMK-----VLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE 114
Query: 144 AAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVG 203
           A A  RQI   +   HQ  IVHRDLK EN L      D  +KI DFG S+   + + +  
Sbjct: 115 ARAKFRQIVSAVQYCHQKFIVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDT 171
Query: 204 LFGSIDYVSPEALLQDRITS-KSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEF- 261
             GS  Y +PE     +    + D+WSLGVILY L+SG  PF  Q+ ++ ++ ++ G++ 
Sbjct: 172 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR 231
Query: 262 -SFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
             FY      +S+  + L+   L ++P++R + ++++   W+
Sbjct: 232 IPFY------MSTDCENLLKKFLILNPSKRGTLEQIMKDRWM 267

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score =  129 bits (324), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 75/222 (33%), Positives = 123/222 (55%), Gaps = 17/222 (7%)
Query: 84  LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVG 143
           L  E+ +M+     V  HPN++ L++V E +  ++L++E  SGGE+FD +VA  R  E  
Sbjct: 60  LFREVRIMK-----VLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE 114
Query: 144 AAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVG 203
           A A  RQI   +   HQ  IVHRDLK EN L      D  +KI DFG S+   + + +  
Sbjct: 115 ARAKFRQIVSAVQYCHQKFIVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDT 171
Query: 204 LFGSIDYVSPEALLQDRITS-KSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEF- 261
             GS  Y +PE     +    + D+WSLGVILY L+SG  PF  Q+ ++ ++ ++ G++ 
Sbjct: 172 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR 231
Query: 262 -SFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
             FY      +S+  + L+   L ++P++R + ++++   W+
Sbjct: 232 IPFY------MSTDCENLLKKFLILNPSKRGTLEQIMKDRWM 267

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score =  129 bits (323), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 75/222 (33%), Positives = 123/222 (55%), Gaps = 17/222 (7%)
Query: 84  LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVG 143
           L  E+ +M+     V  HPN++ L++V E +  ++L++E  SGGE+FD +VA  R  E  
Sbjct: 60  LFREVRIMK-----VLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE 114
Query: 144 AAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVG 203
           A A  RQI   +   HQ  IVHRDLK EN L      D  +KI DFG S+   + + +  
Sbjct: 115 ARAKFRQIVSAVQYCHQKFIVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDE 171
Query: 204 LFGSIDYVSPEALLQDRITS-KSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEF- 261
             GS  Y +PE     +    + D+WSLGVILY L+SG  PF  Q+ ++ ++ ++ G++ 
Sbjct: 172 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR 231
Query: 262 -SFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
             FY      +S+  + L+   L ++P++R + ++++   W+
Sbjct: 232 IPFY------MSTDCENLLKKFLILNPSKRGTLEQIMKDRWM 267

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score =  129 bits (323), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 74/222 (33%), Positives = 123/222 (55%), Gaps = 17/222 (7%)
Query: 84  LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVG 143
           L  E+ +M+     V  HPN++ L++V E +  ++L++E  SGGE+FD +VA  R  E  
Sbjct: 60  LFREVRIMK-----VLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE 114
Query: 144 AAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVG 203
           A A  RQI   +   HQ  IVHRDLK EN L      D  +KI DFG S+   + + +  
Sbjct: 115 ARAKFRQIVSAVQYCHQKFIVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDA 171
Query: 204 LFGSIDYVSPEALLQDRITS-KSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEF- 261
             G+  Y +PE     +    + D+WSLGVILY L+SG  PF  Q+ ++ ++ ++ G++ 
Sbjct: 172 FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR 231
Query: 262 -SFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
             FY      +S+  + L+   L ++P++R + ++++   W+
Sbjct: 232 IPFY------MSTDCENLLKKFLILNPSKRGTLEQIMKDRWM 267

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score =  126 bits (316), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 75/216 (34%), Positives = 118/216 (54%), Gaps = 18/216 (8%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HPN++ L++V E +  ++LI+E  SGGE+FD +VA  R  E  A +  RQI   +   HQ
Sbjct: 70  HPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQ 129
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLS---SVEGYTDPVVGLFGSIDYVSPEALL 217
             IVHRDLK EN L      D  +KI DFG S   +V G  D      GS  Y +PE   
Sbjct: 130 KRIVHRDLKAENLLL---DADMNIKIADFGFSNEFTVGGKLDTFC---GSPPYAAPELFQ 183
Query: 218 QDRITS-KSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEF--SFYEQTWKNISSS 274
             +    + D+WSLGVILY L+SG  PF  Q+ ++ ++ ++ G++   FY      +S+ 
Sbjct: 184 GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFY------MSTD 237
Query: 275 AKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAKEE 310
            + L+   L ++P +R + ++++   W+     ++E
Sbjct: 238 CENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEEDE 273

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score =  126 bits (316), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 74/222 (33%), Positives = 122/222 (54%), Gaps = 17/222 (7%)
Query: 84  LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVG 143
           L  E+ +M+     V  HPN++ L++V E +  ++L++E  SGGE+FD +VA     E  
Sbjct: 53  LFREVRIMK-----VLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKE 107
Query: 144 AAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVG 203
           A A  RQI   +   HQ  IVHRDLK EN L      D  +KI DFG S+   + + +  
Sbjct: 108 ARAKFRQIVSAVQYCHQKFIVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDT 164
Query: 204 LFGSIDYVSPEALLQDRITS-KSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEF- 261
             GS  Y +PE     +    + D+WSLGVILY L+SG  PF  Q+ ++ ++ ++ G++ 
Sbjct: 165 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR 224
Query: 262 -SFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
             FY      +S+  + L+   L ++P++R + ++++   W+
Sbjct: 225 IPFY------MSTDCENLLKKFLILNPSKRGTLEQIMKDRWM 260

>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327

Iteration: 1
 Score =  125 bits (315), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 71/210 (33%), Positives = 114/210 (54%), Gaps = 12/210 (5%)
Query: 95  VENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           +  V  HPN++ L++V E +  ++L+ E  SGGE+FD +VA  R  E  A A  RQI   
Sbjct: 66  IXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSA 125
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           +   HQ  IVHRDLK EN L      D  +KI DFG S+   + + +    G+  Y +PE
Sbjct: 126 VQYCHQKFIVHRDLKAENLLL---DADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPE 182
Query: 215 ALLQDRITS-KSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEF--SFYEQTWKNI 271
                +    + D+WSLGVILY L+SG  PF  Q+ ++ ++ ++ G++   FY       
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYX------ 236
Query: 272 SSSAKQLISSLLTVDPNRRPSAQELLNHPW 301
           S+  + L+   L ++P++R + +++    W
Sbjct: 237 STDCENLLKKFLILNPSKRGTLEQIXKDRW 266

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score =  125 bits (315), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 71/213 (33%), Positives = 116/213 (54%), Gaps = 12/213 (5%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HPN++ L++V E +  ++LI+E  SGGE+FD +VA  R  E  A +  RQI   +   HQ
Sbjct: 73  HPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQ 132
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDR 220
             IVHRDLK EN L      D  +KI DFG S+       +    G+  Y +PE     +
Sbjct: 133 KRIVHRDLKAENLLL---DADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKK 189
Query: 221 ITS-KSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEF--SFYEQTWKNISSSAKQ 277
               + D+WSLGVILY L+SG  PF  Q+ ++ ++ ++ G++   FY      +S+  + 
Sbjct: 190 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFY------MSTDCEN 243
Query: 278 LISSLLTVDPNRRPSAQELLNHPWVIGDSAKEE 310
           L+   L ++P +R + ++++   W+     ++E
Sbjct: 244 LLKRFLVLNPIKRGTLEQIMKDRWINAGHEEDE 276

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score =  122 bits (305), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 67/208 (32%), Positives = 110/208 (52%), Gaps = 8/208 (3%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HPN++ +Y+ + D+  ++L+LE    GEL+  +    R+ E  +A  + ++A+ L   H+
Sbjct: 74  HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHE 133
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDR 220
             ++HRD+KPEN L     E   LKI DFG  SV   +     + G++DY+ PE +    
Sbjct: 134 RKVIHRDIKPENLLMGYKGE---LKIADFGW-SVHAPSLRRRXMCGTLDYLPPEMIEGKT 189
Query: 221 ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLIS 280
              K D+W  GV+ Y  L G PPF + S+ +  + I+  +  F       +S  +K LIS
Sbjct: 190 HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPP----FLSDGSKDLIS 245
Query: 281 SLLTVDPNRRPSAQELLNHPWVIGDSAK 308
            LL   P +R   + ++ HPWV  +S +
Sbjct: 246 KLLRYHPPQRLPLKGVMEHPWVKANSRR 273

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score =  122 bits (305), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 67/208 (32%), Positives = 110/208 (52%), Gaps = 8/208 (3%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HPN++ +Y+ + D+  ++L+LE    GEL+  +    R+ E  +A  + ++A+ L   H+
Sbjct: 73  HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHE 132
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDR 220
             ++HRD+KPEN L     E   LKI DFG  SV   +     + G++DY+ PE +    
Sbjct: 133 RKVIHRDIKPENLLMGYKGE---LKIADFGW-SVHAPSLRRRXMCGTLDYLPPEMIEGKT 188
Query: 221 ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLIS 280
              K D+W  GV+ Y  L G PPF + S+ +  + I+  +  F       +S  +K LIS
Sbjct: 189 HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPP----FLSDGSKDLIS 244
Query: 281 SLLTVDPNRRPSAQELLNHPWVIGDSAK 308
            LL   P +R   + ++ HPWV  +S +
Sbjct: 245 KLLRYHPPQRLPLKGVMEHPWVKANSRR 272

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score =  120 bits (300), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 76/214 (35%), Positives = 119/214 (55%), Gaps = 14/214 (6%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HPN++ L++V E +  ++L++E  SGGE+FD +VA  R  E  A A  RQI   +   HQ
Sbjct: 73  HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 132
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDR 220
             IVHRDLK EN L   D     +KI DFG S+     + +    GS  Y +PE     +
Sbjct: 133 KYIVHRDLKAENLLLDGDMN---IKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKK 189
Query: 221 ITS-KSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEF--SFYEQTWKNISSSAKQ 277
               + D+WSLGVILY L+SG  PF  Q+ ++ ++ ++ G++   FY      +S+  + 
Sbjct: 190 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFY------MSTDCEN 243
Query: 278 LISSLLTVDPNRRPSAQELLNHPWVIGDSAKEEE 311
           L+  LL ++P +R S ++++   W+  +   EEE
Sbjct: 244 LLKKLLVLNPIKRGSLEQIMKDRWM--NVGHEEE 275

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score =  115 bits (289), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 86/297 (28%), Positives = 143/297 (48%), Gaps = 43/297 (14%)
Query: 12  YEVTDILGRGGFSVVRRGIKKTCGETNQV-AIKTLRRIGSTTPYGFPXXXXXXXXXQIGF 70
           +E+  +LG+GG+  V +  K T   T ++ A+K L+                        
Sbjct: 19  FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLK------------------------ 54
Query: 71  FPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELF 130
               K + V +A  T      R I+E V  HP ++DL   ++    ++LILE  SGGELF
Sbjct: 55  ----KAMIVRNAKDTAHTKAERNILEEVK-HPFIVDLIYAFQTGGKLYLILEYLSGGELF 109
Query: 131 DRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFG 190
            ++  +  +ME  A   + +I+  L  LHQ  I++RDLKPEN + LN +    +K+ DFG
Sbjct: 110 MQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPEN-IMLNHQ--GHVKLTDFG 166
Query: 191 LSSVEGYTDPVVGLF-GSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSN 249
           L     +   V   F G+I+Y++PE L++       D WSLG ++Y +L+G PPF  ++ 
Sbjct: 167 LCKESIHDGTVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENR 226
Query: 250 RQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR-----PSAQELLNHPW 301
           ++    I+  + +        ++  A+ L+  LL  +   R       A E+  HP+
Sbjct: 227 KKTIDKILKCKLNLPPY----LTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPF 279

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score =  115 bits (289), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 86/297 (28%), Positives = 143/297 (48%), Gaps = 43/297 (14%)
Query: 12  YEVTDILGRGGFSVVRRGIKKTCGETNQV-AIKTLRRIGSTTPYGFPXXXXXXXXXQIGF 70
           +E+  +LG+GG+  V +  K T   T ++ A+K L+                        
Sbjct: 19  FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLK------------------------ 54
Query: 71  FPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELF 130
               K + V +A  T      R I+E V  HP ++DL   ++    ++LILE  SGGELF
Sbjct: 55  ----KAMIVRNAKDTAHTKAERNILEEVK-HPFIVDLIYAFQTGGKLYLILEYLSGGELF 109
Query: 131 DRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFG 190
            ++  +  +ME  A   + +I+  L  LHQ  I++RDLKPEN + LN +    +K+ DFG
Sbjct: 110 MQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPEN-IMLNHQ--GHVKLTDFG 166
Query: 191 LSSVEGYTDPVVGLF-GSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSN 249
           L     +   V   F G+I+Y++PE L++       D WSLG ++Y +L+G PPF  ++ 
Sbjct: 167 LCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENR 226
Query: 250 RQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR-----PSAQELLNHPW 301
           ++    I+  + +        ++  A+ L+  LL  +   R       A E+  HP+
Sbjct: 227 KKTIDKILKCKLNLPPY----LTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPF 279

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score =  115 bits (287), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 73/199 (36%), Positives = 108/199 (54%), Gaps = 8/199 (4%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           H +V+  +  +ED + V ++LELC    L +    ++   E  A   +RQI  G   LH+
Sbjct: 76  HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR 135
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDYVSPEALLQD 219
             ++HRDLK  N LFLN  ED  +KI DFGL++ VE   +    L G+ +Y++PE L + 
Sbjct: 136 NRVIHRDLKLGN-LFLN--EDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKK 192
Query: 220 RITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLI 279
             + + D+WS+G I+Y LL G PPF     ++    I   E+S      K+I+  A  LI
Sbjct: 193 GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSI----PKHINPVAASLI 248
Query: 280 SSLLTVDPNRRPSAQELLN 298
             +L  DP  RP+  ELLN
Sbjct: 249 QKMLQTDPTARPTINELLN 267

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score =  114 bits (286), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 71/198 (35%), Positives = 108/198 (54%), Gaps = 8/198 (4%)
Query: 102 PNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQA 161
           P+V+  +  +ED + V+++LE+C    L +    ++   E  A   +RQ  +G+  LH  
Sbjct: 102 PHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN 161
Query: 162 NIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDYVSPEALLQDR 220
            ++HRDLK  N LFLND  D  +KI DFGL++ +E   +    L G+ +Y++PE L +  
Sbjct: 162 RVIHRDLKLGN-LFLNDDMD--VKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKG 218
Query: 221 ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLIS 280
            + + D+WSLG ILY LL G PPF     ++    I   E+S      ++I+  A  LI 
Sbjct: 219 HSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYS----VPRHINPVASALIR 274
Query: 281 SLLTVDPNRRPSAQELLN 298
            +L  DP  RPS  ELL 
Sbjct: 275 RMLHADPTLRPSVAELLT 292

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score =  114 bits (286), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 71/198 (35%), Positives = 108/198 (54%), Gaps = 8/198 (4%)
Query: 102 PNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQA 161
           P+V+  +  +ED + V+++LE+C    L +    ++   E  A   +RQ  +G+  LH  
Sbjct: 102 PHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN 161
Query: 162 NIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDYVSPEALLQDR 220
            ++HRDLK  N LFLND  D  +KI DFGL++ +E   +    L G+ +Y++PE L +  
Sbjct: 162 RVIHRDLKLGN-LFLNDDMD--VKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKG 218
Query: 221 ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLIS 280
            + + D+WSLG ILY LL G PPF     ++    I   E+S      ++I+  A  LI 
Sbjct: 219 HSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYS----VPRHINPVASALIR 274
Query: 281 SLLTVDPNRRPSAQELLN 298
            +L  DP  RPS  ELL 
Sbjct: 275 RMLHADPTLRPSVAELLT 292

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score =  114 bits (286), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 73/199 (36%), Positives = 108/199 (54%), Gaps = 8/199 (4%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           H +V+  +  +ED + V ++LELC    L +    ++   E  A   +RQI  G   LH+
Sbjct: 80  HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR 139
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDYVSPEALLQD 219
             ++HRDLK  N LFLN  ED  +KI DFGL++ VE   +    L G+ +Y++PE L + 
Sbjct: 140 NRVIHRDLKLGN-LFLN--EDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKK 196
Query: 220 RITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLI 279
             + + D+WS+G I+Y LL G PPF     ++    I   E+S      K+I+  A  LI
Sbjct: 197 GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSI----PKHINPVAASLI 252
Query: 280 SSLLTVDPNRRPSAQELLN 298
             +L  DP  RP+  ELLN
Sbjct: 253 QKMLQTDPTARPTINELLN 271

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score =  114 bits (286), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 71/198 (35%), Positives = 108/198 (54%), Gaps = 8/198 (4%)
Query: 102 PNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQA 161
           P+V+  +  +ED + V+++LE+C    L +    ++   E  A   +RQ  +G+  LH  
Sbjct: 102 PHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN 161
Query: 162 NIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDYVSPEALLQDR 220
            ++HRDLK  N LFLND  D  +KI DFGL++ +E   +    L G+ +Y++PE L +  
Sbjct: 162 RVIHRDLKLGN-LFLNDDMD--VKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKG 218
Query: 221 ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLIS 280
            + + D+WSLG ILY LL G PPF     ++    I   E+S      ++I+  A  LI 
Sbjct: 219 HSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYS----VPRHINPVASALIR 274
Query: 281 SLLTVDPNRRPSAQELLN 298
            +L  DP  RPS  ELL 
Sbjct: 275 RMLHADPTLRPSVAELLT 292

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score =  114 bits (286), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/198 (35%), Positives = 108/198 (54%), Gaps = 8/198 (4%)
Query: 102 PNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQA 161
           P+V+  +  +ED + V+++LE+C    L +    ++   E  A   +RQ  +G+  LH  
Sbjct: 86  PHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN 145
Query: 162 NIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDYVSPEALLQDR 220
            ++HRDLK  N LFLND  D  +KI DFGL++ +E   +    L G+ +Y++PE L +  
Sbjct: 146 RVIHRDLKLGN-LFLNDDMD--VKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKG 202
Query: 221 ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLIS 280
            + + D+WSLG ILY LL G PPF     ++    I   E+S      ++I+  A  LI 
Sbjct: 203 HSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYS----VPRHINPVASALIR 258
Query: 281 SLLTVDPNRRPSAQELLN 298
            +L  DP  RPS  ELL 
Sbjct: 259 RMLHADPTLRPSVAELLT 276

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score =  114 bits (286), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/199 (36%), Positives = 108/199 (54%), Gaps = 8/199 (4%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           H +V+  +  +ED + V ++LELC    L +    ++   E  A   +RQI  G   LH+
Sbjct: 76  HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR 135
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDYVSPEALLQD 219
             ++HRDLK  N LFLN  ED  +KI DFGL++ VE   +    L G+ +Y++PE L + 
Sbjct: 136 NRVIHRDLKLGN-LFLN--EDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKK 192
Query: 220 RITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLI 279
             + + D+WS+G I+Y LL G PPF     ++    I   E+S      K+I+  A  LI
Sbjct: 193 GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSI----PKHINPVAASLI 248
Query: 280 SSLLTVDPNRRPSAQELLN 298
             +L  DP  RP+  ELLN
Sbjct: 249 QKMLQTDPTARPTINELLN 267

>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362

Iteration: 1
 Score =  114 bits (285), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 88/302 (29%), Positives = 136/302 (45%), Gaps = 48/302 (15%)
Query: 9   TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQI 68
           +D YE+   +G G F V R    K   E   VA+K + R                     
Sbjct: 18  SDRYELVKDIGSGNFGVARLMRDKQSNEL--VAVKYIER--------------------- 54
Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVS-PHPNVIDLYDVYEDQNGVHLILELCSGG 127
                       + +  N   V R+I+ + S  HPN++   +V      + +++E  SGG
Sbjct: 55  -----------GEKIAAN---VKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGG 100
Query: 128 ELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSP-LKI 186
           ELF+RI    R+ E  A    +Q+  G++  H   + HRDLK EN L   D   +P LKI
Sbjct: 101 ELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLL--DGSPAPRLKI 158
Query: 187 MDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSK-SDMWSLGVILYILLSGYPPF- 244
            DFG S             G+  Y++PE LL+     K +D+WS GV LY++L G  PF 
Sbjct: 159 CDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE 218
Query: 245 ---IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPW 301
                ++ R+    I+  +++  +  + +IS   + LIS +   DP +R S  E+ NH W
Sbjct: 219 DPEEPKNFRKTIHRILNVQYAIPD--YVHISPECRHLISRIFVADPAKRISIPEIRNHEW 276
Query: 302 VI 303
            +
Sbjct: 277 FL 278

>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317

Iteration: 1
 Score =  114 bits (285), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/223 (32%), Positives = 115/223 (51%), Gaps = 11/223 (4%)
Query: 90  VMRKIVENVS-PHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVI 148
           V R+I+ + S  HPN++   +V      + +++E  SGGELF+RI    R+ E  A    
Sbjct: 62  VKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFF 121
Query: 149 RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSP-LKIMDFGLSSVEGYTDPVVGLFGS 207
           +Q+  G++  H   + HRDLK EN L   D   +P LKI DFG S             G+
Sbjct: 122 QQLISGVSYAHAMQVAHRDLKLENTLL--DGSPAPRLKIADFGYSKASVLHSQPKSAVGT 179
Query: 208 IDYVSPEALLQDRITSK-SDMWSLGVILYILLSGYPPF----IAQSNRQKQQMIMAGEFS 262
             Y++PE LL+     K +D+WS GV LY++L G  PF      ++ R+    I+  +++
Sbjct: 180 PAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYA 239
Query: 263 FYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGD 305
             +  + +IS   + LIS +   DP +R S  E+ NH W + +
Sbjct: 240 IPD--YVHISPECRHLISRIFVADPAKRISIPEIRNHEWFLKN 280

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score =  114 bits (285), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/199 (36%), Positives = 108/199 (54%), Gaps = 8/199 (4%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           H +V+  +  +ED + V ++LELC    L +    ++   E  A   +RQI  G   LH+
Sbjct: 74  HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR 133
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDYVSPEALLQD 219
             ++HRDLK  N LFLN  ED  +KI DFGL++ VE   +    L G+ +Y++PE L + 
Sbjct: 134 NRVIHRDLKLGN-LFLN--EDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKK 190
Query: 220 RITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLI 279
             + + D+WS+G I+Y LL G PPF     ++    I   E+S      K+I+  A  LI
Sbjct: 191 GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSI----PKHINPVAASLI 246
Query: 280 SSLLTVDPNRRPSAQELLN 298
             +L  DP  RP+  ELLN
Sbjct: 247 QKMLQTDPTARPTINELLN 265

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score =  114 bits (285), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/199 (36%), Positives = 108/199 (54%), Gaps = 8/199 (4%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           H +V+  +  +ED + V ++LELC    L +    ++   E  A   +RQI  G   LH+
Sbjct: 98  HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR 157
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDYVSPEALLQD 219
             ++HRDLK  N LFLN  ED  +KI DFGL++ VE   +    L G+ +Y++PE L + 
Sbjct: 158 NRVIHRDLKLGN-LFLN--EDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKK 214
Query: 220 RITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLI 279
             + + D+WS+G I+Y LL G PPF     ++    I   E+S      K+I+  A  LI
Sbjct: 215 GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSI----PKHINPVAASLI 270
Query: 280 SSLLTVDPNRRPSAQELLN 298
             +L  DP  RP+  ELLN
Sbjct: 271 QKMLQTDPTARPTINELLN 289

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score =  114 bits (284), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 73/199 (36%), Positives = 108/199 (54%), Gaps = 8/199 (4%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           H +V+  +  +ED + V ++LELC    L +    ++   E  A   +RQI  G   LH+
Sbjct: 100 HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR 159
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDYVSPEALLQD 219
             ++HRDLK  N LFLN  ED  +KI DFGL++ VE   +    L G+ +Y++PE L + 
Sbjct: 160 NRVIHRDLKLGN-LFLN--EDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKK 216
Query: 220 RITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLI 279
             + + D+WS+G I+Y LL G PPF     ++    I   E+S      K+I+  A  LI
Sbjct: 217 GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSI----PKHINPVAASLI 272
Query: 280 SSLLTVDPNRRPSAQELLN 298
             +L  DP  RP+  ELLN
Sbjct: 273 QKMLQTDPTARPTINELLN 291

>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361

Iteration: 1
 Score =  114 bits (284), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 73/221 (33%), Positives = 114/221 (51%), Gaps = 11/221 (4%)
Query: 90  VMRKIVENVS-PHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVI 148
           V R+I+ + S  HPN++   +V      + +++E  SGGELF+RI    R+ E  A    
Sbjct: 61  VKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFF 120
Query: 149 RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSP-LKIMDFGLSSVEGYTDPVVGLFGS 207
           +Q+  G++  H   + HRDLK EN L   D   +P LKI DFG S             G+
Sbjct: 121 QQLISGVSYCHAMQVCHRDLKLENTLL--DGSPAPRLKICDFGYSKSSVLHSQPKSTVGT 178
Query: 208 IDYVSPEALLQDRITSK-SDMWSLGVILYILLSGYPPF----IAQSNRQKQQMIMAGEFS 262
             Y++PE LL+     K +D+WS GV LY++L G  PF      ++ R+    I+  +++
Sbjct: 179 PAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYA 238
Query: 263 FYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVI 303
             +  + +IS   + LIS +   DP +R S  E+ NH W +
Sbjct: 239 IPD--YVHISPECRHLISRIFVADPAKRISIPEIRNHEWFL 277

>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292

Iteration: 1
 Score =  111 bits (278), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 66/208 (31%), Positives = 109/208 (52%), Gaps = 8/208 (3%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HPN++ LY+ + D+  ++LILE    GEL+  +     + E   A ++ ++A+ L   H 
Sbjct: 82  HPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHG 141
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDR 220
             ++HRD+KPEN L     E     I DFG  SV   +     + G++DY+ PE +    
Sbjct: 142 KKVIHRDIKPENLLLGLKGELK---IADFGW-SVHAPSLRRKTMCGTLDYLPPEMIEGRM 197
Query: 221 ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLIS 280
              K D+W +GV+ Y LL G PPF + S+ +  + I+  +  F      ++ + A+ LIS
Sbjct: 198 HNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFP----ASVPTGAQDLIS 253
Query: 281 SLLTVDPNRRPSAQELLNHPWVIGDSAK 308
            LL  +P+ R    ++  HPWV  +S +
Sbjct: 254 KLLRHNPSERLPLAQVSAHPWVRANSRR 281

>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361

Iteration: 1
 Score =  111 bits (277), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/221 (33%), Positives = 110/221 (49%), Gaps = 11/221 (4%)
Query: 90  VMRKIVENVS-PHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVI 148
           V R+I+ + S  HPN++   +V      + +I+E  SGGEL++RI    R+ E  A    
Sbjct: 63  VQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFF 122
Query: 149 RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSP-LKIMDFGLSSVEGYTDPVVGLFGS 207
           +Q+  G++  H   I HRDLK EN L   D   +P LKI DFG S             G+
Sbjct: 123 QQLLSGVSYCHSMQICHRDLKLENTLL--DGSPAPRLKICDFGYSKSSVLHSQPKSTVGT 180
Query: 208 IDYVSPEALLQDRITSK-SDMWSLGVILYILLSGYPPF----IAQSNRQKQQMIMAGEFS 262
             Y++PE LL+     K +D+WS GV LY++L G  PF      +  R+  Q I++ ++S
Sbjct: 181 PAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYS 240
Query: 263 FYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVI 303
             +     IS     LIS +   DP  R S  E+  H W +
Sbjct: 241 IPDDI--RISPECCHLISRIFVADPATRISIPEIKTHSWFL 279

>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345

Iteration: 1
 Score =  111 bits (277), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 92/362 (25%), Positives = 148/362 (40%), Gaps = 86/362 (23%)
Query: 2   GQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXX 61
           G    +L  +Y +   +G+G + VVR  I+        + I    +I    P        
Sbjct: 18  GGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINP-------- 69
Query: 62  XXXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLIL 121
                        K V      +  E+ +M+K+      HPN+  LY+VYED+  + L++
Sbjct: 70  -------------KDVE----RIKTEVRLMKKL-----HHPNIARLYEVYEDEQYICLVM 107
Query: 122 ELCSGGELFDRI--------------------------------------------VAQE 137
           ELC GG L D++                                            V +E
Sbjct: 108 ELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQRE 167
Query: 138 RYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV--- 194
           + +    + ++RQI   L  LH   I HRD+KPEN LF  ++    +K++DFGLS     
Sbjct: 168 KLI----SNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNK-SFEIKLVDFGLSKEFYK 222
Query: 195 --EGYTDPVVGLFGSIDYVSPEAL--LQDRITSKSDMWSLGVILYILLSGYPPFIAQSNR 250
              G    +    G+  +V+PE L    +    K D WS GV+L++LL G  PF   ++ 
Sbjct: 223 LNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDA 282
Query: 251 QKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAKEE 310
                ++  +  F    +  +S  A+ L+S+LL  + + R  A   L HPW+   S K  
Sbjct: 283 DTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFSDKIY 342
Query: 311 EM 312
           +M
Sbjct: 343 KM 344

>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362

Iteration: 1
 Score =  110 bits (276), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 72/221 (32%), Positives = 113/221 (51%), Gaps = 11/221 (4%)
Query: 90  VMRKIVENVS-PHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVI 148
           V R+I+ + S  HPN++   +V      + +++E  SGGELF+RI    R+ E  A    
Sbjct: 62  VKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFF 121
Query: 149 RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSP-LKIMDFGLSSVEGYTDPVVGLFGS 207
           +Q+  G++  H   + HRDLK EN L   D   +P LKI  FG S             G+
Sbjct: 122 QQLISGVSYCHAMQVCHRDLKLENTLL--DGSPAPRLKICAFGYSKSSVLHSQPKSTVGT 179
Query: 208 IDYVSPEALLQDRITSK-SDMWSLGVILYILLSGYPPF----IAQSNRQKQQMIMAGEFS 262
             Y++PE LL+     K +D+WS GV LY++L G  PF      ++ R+    I+  +++
Sbjct: 180 PAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYA 239
Query: 263 FYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVI 303
             +  + +IS   + LIS +   DP +R S  E+ NH W +
Sbjct: 240 IPD--YVHISPECRHLISRIFVADPAKRISIPEIRNHEWFL 278

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score =  110 bits (275), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 68/214 (31%), Positives = 116/214 (54%), Gaps = 11/214 (5%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ--ERYMEVGAAAVIRQIAEGLAAL 158
           HP++++LY+ +ED N V+L+LE+C  GE+ +R +    + + E  A   + QI  G+  L
Sbjct: 70  HPSILELYNYFEDSNYVYLVLEMCHNGEM-NRYLKNRVKPFSENEARHFMHQIITGMLYL 128
Query: 159 HQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDYVSPEALL 217
           H   I+HRDL   N L   +     +KI DFGL++ ++   +    L G+ +Y+SPE   
Sbjct: 129 HSHGILHRDLTLSNLLLTRNMN---IKIADFGLATQLKMPHEKHYTLCGTPNYISPEIAT 185
Query: 218 QDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQ 277
           +     +SD+WSLG + Y LL G PPF   + +     ++  ++    +    +S  AK 
Sbjct: 186 RSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADY----EMPSFLSIEAKD 241
Query: 278 LISSLLTVDPNRRPSAQELLNHPWVIGDSAKEEE 311
           LI  LL  +P  R S   +L+HP++  +S+ + +
Sbjct: 242 LIHQLLRRNPADRLSLSSVLDHPFMSRNSSTKSK 275

>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362

Iteration: 1
 Score =  110 bits (275), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 72/221 (32%), Positives = 113/221 (51%), Gaps = 11/221 (4%)
Query: 90  VMRKIVENVS-PHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVI 148
           V R+I+ + S  HPN++   +V      + +++E  SGGELF+RI    R+ E  A    
Sbjct: 62  VKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFF 121
Query: 149 RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSP-LKIMDFGLSSVEGYTDPVVGLFGS 207
           +Q+  G++  H   + HRDLK EN L   D   +P LKI  FG S             G+
Sbjct: 122 QQLISGVSYCHAMQVCHRDLKLENTLL--DGSPAPRLKICAFGYSKSSVLHSQPKDTVGT 179
Query: 208 IDYVSPEALLQDRITSK-SDMWSLGVILYILLSGYPPF----IAQSNRQKQQMIMAGEFS 262
             Y++PE LL+     K +D+WS GV LY++L G  PF      ++ R+    I+  +++
Sbjct: 180 PAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYA 239
Query: 263 FYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVI 303
             +  + +IS   + LIS +   DP +R S  E+ NH W +
Sbjct: 240 IPD--YVHISPECRHLISRIFVADPAKRISIPEIRNHEWFL 278

>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score =  110 bits (275), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 108/205 (52%), Gaps = 8/205 (3%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           H NV+  Y    + N  +L LE CSGGELFDRI       E  A     Q+  G+  LH 
Sbjct: 63  HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALL 217
             I HRD+KPEN L L++R++  LKI DFGL++V  Y +    +  + G++ YV+PE L 
Sbjct: 123 IGITHRDIKPEN-LLLDERDN--LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 218 QDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAK 276
           +    ++  D+WS G++L  +L+G  P+  Q +   Q+     E   Y   WK I S+  
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPW-DQPSDSXQEYSDWKEKKTYLNPWKKIDSAPL 238
Query: 277 QLISSLLTVDPNRRPSAQELLNHPW 301
            L+  +L  +P+ R +  ++    W
Sbjct: 239 ALLHKILVENPSARITIPDIKKDRW 263

>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score =  109 bits (273), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 108/205 (52%), Gaps = 8/205 (3%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           H NV+  Y    + N  +L LE CSGGELFDRI       E  A     Q+  G+  LH 
Sbjct: 63  HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALL 217
             I HRD+KPEN L L++R++  LKI DFGL++V  Y +    +  + G++ YV+PE L 
Sbjct: 123 IGITHRDIKPEN-LLLDERDN--LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 218 QDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAK 276
           +    ++  D+WS G++L  +L+G  P+  Q +   Q+     E   Y   WK I S+  
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPW-DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 238
Query: 277 QLISSLLTVDPNRRPSAQELLNHPW 301
            L+  +L  +P+ R +  ++    W
Sbjct: 239 ALLHKILVENPSARITIPDIKKDRW 263

>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278

Iteration: 1
 Score =  109 bits (273), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 108/205 (52%), Gaps = 8/205 (3%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           H NV+  Y    + N  +L LE CSGGELFDRI       E  A     Q+  G+  LH 
Sbjct: 62  HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 121
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALL 217
             I HRD+KPEN L L++R++  LKI DFGL++V  Y +    +  + G++ YV+PE L 
Sbjct: 122 IGITHRDIKPEN-LLLDERDN--LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 178
Query: 218 QDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAK 276
           +    ++  D+WS G++L  +L+G  P+  Q +   Q+     E   Y   WK I S+  
Sbjct: 179 RREFHAEPVDVWSCGIVLTAMLAGELPW-DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 237
Query: 277 QLISSLLTVDPNRRPSAQELLNHPW 301
            L+  +L  +P+ R +  ++    W
Sbjct: 238 ALLHKILVENPSARITIPDIKKDRW 262

>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score =  109 bits (273), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 108/205 (52%), Gaps = 8/205 (3%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           H NV+  Y    + N  +L LE CSGGELFDRI       E  A     Q+  G+  LH 
Sbjct: 63  HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALL 217
             I HRD+KPEN L L++R++  LKI DFGL++V  Y +    +  + G++ YV+PE L 
Sbjct: 123 IGITHRDIKPEN-LLLDERDN--LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 218 QDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAK 276
           +    ++  D+WS G++L  +L+G  P+  Q +   Q+     E   Y   WK I S+  
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPW-DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 238
Query: 277 QLISSLLTVDPNRRPSAQELLNHPW 301
            L+  +L  +P+ R +  ++    W
Sbjct: 239 ALLHKILVENPSARITIPDIKKDRW 263

>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score =  109 bits (273), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 108/205 (52%), Gaps = 8/205 (3%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           H NV+  Y    + N  +L LE CSGGELFDRI       E  A     Q+  G+  LH 
Sbjct: 63  HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALL 217
             I HRD+KPEN L L++R++  LKI DFGL++V  Y +    +  + G++ YV+PE L 
Sbjct: 123 IGITHRDIKPEN-LLLDERDN--LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 218 QDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAK 276
           +    ++  D+WS G++L  +L+G  P+  Q +   Q+     E   Y   WK I S+  
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPW-DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 238
Query: 277 QLISSLLTVDPNRRPSAQELLNHPW 301
            L+  +L  +P+ R +  ++    W
Sbjct: 239 ALLHKILVENPSARITIPDIKKDRW 263

>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276

Iteration: 1
 Score =  109 bits (273), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 108/205 (52%), Gaps = 8/205 (3%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           H NV+  Y    + N  +L LE CSGGELFDRI       E  A     Q+  G+  LH 
Sbjct: 64  HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALL 217
             I HRD+KPEN L L++R++  LKI DFGL++V  Y +    +  + G++ YV+PE L 
Sbjct: 124 IGITHRDIKPEN-LLLDERDN--LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 218 QDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAK 276
           +    ++  D+WS G++L  +L+G  P+  Q +   Q+     E   Y   WK I S+  
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPW-DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 239
Query: 277 QLISSLLTVDPNRRPSAQELLNHPW 301
            L+  +L  +P+ R +  ++    W
Sbjct: 240 ALLHKILVENPSARITIPDIKKDRW 264

>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297

Iteration: 1
 Score =  109 bits (273), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 108/205 (52%), Gaps = 8/205 (3%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           H NV+  Y    + N  +L LE CSGGELFDRI       E  A     Q+  G+  LH 
Sbjct: 64  HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALL 217
             I HRD+KPEN L L++R++  LKI DFGL++V  Y +    +  + G++ YV+PE L 
Sbjct: 124 IGITHRDIKPEN-LLLDERDN--LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 218 QDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAK 276
           +    ++  D+WS G++L  +L+G  P+  Q +   Q+     E   Y   WK I S+  
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPW-DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 239
Query: 277 QLISSLLTVDPNRRPSAQELLNHPW 301
            L+  +L  +P+ R +  ++    W
Sbjct: 240 ALLHKILVENPSARITIPDIKKDRW 264

>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289

Iteration: 1
 Score =  109 bits (273), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 108/205 (52%), Gaps = 8/205 (3%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           H NV+  Y    + N  +L LE CSGGELFDRI       E  A     Q+  G+  LH 
Sbjct: 64  HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALL 217
             I HRD+KPEN L L++R++  LKI DFGL++V  Y +    +  + G++ YV+PE L 
Sbjct: 124 IGITHRDIKPEN-LLLDERDN--LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 218 QDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAK 276
           +    ++  D+WS G++L  +L+G  P+  Q +   Q+     E   Y   WK I S+  
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPW-DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 239
Query: 277 QLISSLLTVDPNRRPSAQELLNHPW 301
            L+  +L  +P+ R +  ++    W
Sbjct: 240 ALLHKILVENPSARITIPDIKKDRW 264

>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295

Iteration: 1
 Score =  109 bits (273), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 108/205 (52%), Gaps = 8/205 (3%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           H NV+  Y    + N  +L LE CSGGELFDRI       E  A     Q+  G+  LH 
Sbjct: 64  HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALL 217
             I HRD+KPEN L L++R++  LKI DFGL++V  Y +    +  + G++ YV+PE L 
Sbjct: 124 IGITHRDIKPEN-LLLDERDN--LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 218 QDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAK 276
           +    ++  D+WS G++L  +L+G  P+  Q +   Q+     E   Y   WK I S+  
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPW-DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 239
Query: 277 QLISSLLTVDPNRRPSAQELLNHPW 301
            L+  +L  +P+ R +  ++    W
Sbjct: 240 ALLHKILVENPSARITIPDIKKDRW 264

>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score =  109 bits (272), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 108/205 (52%), Gaps = 8/205 (3%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           H NV+  Y    + N  +L LE CSGGELFDRI       E  A     Q+  G+  LH 
Sbjct: 63  HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALL 217
             I HRD+KPEN L L++R++  LKI DFGL++V  Y +    +  + G++ YV+PE L 
Sbjct: 123 IGITHRDIKPEN-LLLDERDN--LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 218 QDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAK 276
           +    ++  D+WS G++L  +L+G  P+  Q +   Q+     E   Y   WK I S+  
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPW-DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 238
Query: 277 QLISSLLTVDPNRRPSAQELLNHPW 301
            L+  +L  +P+ R +  ++    W
Sbjct: 239 ALLHKILVENPSARITIPDIKKDRW 263

>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score =  109 bits (272), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 108/205 (52%), Gaps = 8/205 (3%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           H NV+  Y    + N  +L LE CSGGELFDRI       E  A     Q+  G+  LH 
Sbjct: 63  HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALL 217
             I HRD+KPEN L L++R++  LKI DFGL++V  Y +    +  + G++ YV+PE L 
Sbjct: 123 IGITHRDIKPEN-LLLDERDN--LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 218 QDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAK 276
           +    ++  D+WS G++L  +L+G  P+  Q +   Q+     E   Y   WK I S+  
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPW-DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 238
Query: 277 QLISSLLTVDPNRRPSAQELLNHPW 301
            L+  +L  +P+ R +  ++    W
Sbjct: 239 ALLHKILVENPSARITIPDIKKDRW 263

>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273

Iteration: 1
 Score =  109 bits (272), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 108/205 (52%), Gaps = 8/205 (3%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           H NV+  Y    + N  +L LE CSGGELFDRI       E  A     Q+  G+  LH 
Sbjct: 63  HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALL 217
             I HRD+KPEN L L++R++  LKI DFGL++V  Y +    +  + G++ YV+PE L 
Sbjct: 123 IGITHRDIKPEN-LLLDERDN--LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 218 QDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAK 276
           +    ++  D+WS G++L  +L+G  P+  Q +   Q+     E   Y   WK I S+  
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPW-DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 238
Query: 277 QLISSLLTVDPNRRPSAQELLNHPW 301
            L+  +L  +P+ R +  ++    W
Sbjct: 239 ALLHKILVENPSARITIPDIKKDRW 263

>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323

Iteration: 1
 Score =  109 bits (272), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 108/205 (52%), Gaps = 8/205 (3%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           H NV+  Y    + N  +L LE CSGGELFDRI       E  A     Q+  G+  LH 
Sbjct: 64  HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALL 217
             I HRD+KPEN L L++R++  LKI DFGL++V  Y +    +  + G++ YV+PE L 
Sbjct: 124 IGITHRDIKPEN-LLLDERDN--LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 218 QDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAK 276
           +    ++  D+WS G++L  +L+G  P+  Q +   Q+     E   Y   WK I S+  
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPW-DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 239
Query: 277 QLISSLLTVDPNRRPSAQELLNHPW 301
            L+  +L  +P+ R +  ++    W
Sbjct: 240 ALLHKILVENPSARITIPDIKKDRW 264

>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322

Iteration: 1
 Score =  109 bits (272), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 108/205 (52%), Gaps = 8/205 (3%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           H NV+  Y    + N  +L LE CSGGELFDRI       E  A     Q+  G+  LH 
Sbjct: 63  HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALL 217
             I HRD+KPEN L L++R++  LKI DFGL++V  Y +    +  + G++ YV+PE L 
Sbjct: 123 IGITHRDIKPEN-LLLDERDN--LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 218 QDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAK 276
           +    ++  D+WS G++L  +L+G  P+  Q +   Q+     E   Y   WK I S+  
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPW-DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 238
Query: 277 QLISSLLTVDPNRRPSAQELLNHPW 301
            L+  +L  +P+ R +  ++    W
Sbjct: 239 ALLHKILVENPSARITIPDIKKDRW 263

>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276

Iteration: 1
 Score =  109 bits (272), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 108/205 (52%), Gaps = 8/205 (3%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           H NV+  Y    + N  +L LE CSGGELFDRI       E  A     Q+  G+  LH 
Sbjct: 64  HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALL 217
             I HRD+KPEN L L++R++  LKI DFGL++V  Y +    +  + G++ YV+PE L 
Sbjct: 124 IGITHRDIKPEN-LLLDERDN--LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 180
Query: 218 QDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAK 276
           +    ++  D+WS G++L  +L+G  P+  Q +   Q+     E   Y   WK I S+  
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPW-DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 239
Query: 277 QLISSLLTVDPNRRPSAQELLNHPW 301
            L+  +L  +P+ R +  ++    W
Sbjct: 240 ALLHKILVENPSARITIPDIKKDRW 264

>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271

Iteration: 1
 Score =  109 bits (272), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 108/205 (52%), Gaps = 8/205 (3%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           H NV+  Y    + N  +L LE CSGGELFDRI       E  A     Q+  G+  LH 
Sbjct: 63  HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALL 217
             I HRD+KPEN L L++R++  LKI DFGL++V  Y +    +  + G++ YV+PE L 
Sbjct: 123 IGITHRDIKPEN-LLLDERDN--LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 218 QDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAK 276
           +    ++  D+WS G++L  +L+G  P+  Q +   Q+     E   Y   WK I S+  
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPW-DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 238
Query: 277 QLISSLLTVDPNRRPSAQELLNHPW 301
            L+  +L  +P+ R +  ++    W
Sbjct: 239 ALLHKILVENPSARITIPDIKKDRW 263

>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273

Iteration: 1
 Score =  109 bits (272), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 108/205 (52%), Gaps = 8/205 (3%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           H NV+  Y    + N  +L LE CSGGELFDRI       E  A     Q+  G+  LH 
Sbjct: 64  HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALL 217
             I HRD+KPEN L L++R++  LKI DFGL++V  Y +    +  + G++ YV+PE L 
Sbjct: 124 IGITHRDIKPEN-LLLDERDN--LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 218 QDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAK 276
           +    ++  D+WS G++L  +L+G  P+  Q +   Q+     E   Y   WK I S+  
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPW-DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 239
Query: 277 QLISSLLTVDPNRRPSAQELLNHPW 301
            L+  +L  +P+ R +  ++    W
Sbjct: 240 ALLHKILVENPSARITIPDIKKDRW 264

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score =  109 bits (272), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 108/205 (52%), Gaps = 8/205 (3%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           H NV+  Y    + N  +L LE CSGGELFDRI       E  A     Q+  G+  LH 
Sbjct: 63  HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALL 217
             I HRD+KPEN L L++R++  LKI DFGL++V  Y +    +  + G++ YV+PE L 
Sbjct: 123 IGITHRDIKPEN-LLLDERDN--LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 218 QDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAK 276
           +    ++  D+WS G++L  +L+G  P+  Q +   Q+     E   Y   WK I S+  
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPW-DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 238
Query: 277 QLISSLLTVDPNRRPSAQELLNHPW 301
            L+  +L  +P+ R +  ++    W
Sbjct: 239 ALLHKILVENPSARITIPDIKKDRW 263

>pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269

Iteration: 1
 Score =  109 bits (272), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 108/205 (52%), Gaps = 8/205 (3%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           H NV+  Y    + N  +L LE CSGGELFDRI       E  A     Q+  G+  LH 
Sbjct: 63  HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALL 217
             I HRD+KPEN L L++R++  LKI DFGL++V  Y +    +  + G++ YV+PE L 
Sbjct: 123 IGITHRDIKPEN-LLLDERDN--LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 218 QDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAK 276
           +    ++  D+WS G++L  +L+G  P+  Q +   Q+     E   Y   WK I S+  
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPW-DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 238
Query: 277 QLISSLLTVDPNRRPSAQELLNHPW 301
            L+  +L  +P+ R +  ++    W
Sbjct: 239 ALLHKILVENPSARITIPDIKKDRW 263

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score =  109 bits (272), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 108/205 (52%), Gaps = 8/205 (3%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           H NV+  Y    + N  +L LE CSGGELFDRI       E  A     Q+  G+  LH 
Sbjct: 64  HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALL 217
             I HRD+KPEN L L++R++  LKI DFGL++V  Y +    +  + G++ YV+PE L 
Sbjct: 124 IGITHRDIKPEN-LLLDERDN--LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 218 QDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAK 276
           +    ++  D+WS G++L  +L+G  P+  Q +   Q+     E   Y   WK I S+  
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPW-DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 239
Query: 277 QLISSLLTVDPNRRPSAQELLNHPW 301
            L+  +L  +P+ R +  ++    W
Sbjct: 240 ALLHKILVENPSARITIPDIKKDRW 264

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score =  108 bits (271), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 108/205 (52%), Gaps = 8/205 (3%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           H NV+  Y    + N  +L LE CSGGELFDRI       E  A     Q+  G+  LH 
Sbjct: 63  HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALL 217
             I HRD+KPEN L L++R++  LKI DFGL++V  Y +    +  + G++ YV+PE L 
Sbjct: 123 IGITHRDIKPEN-LLLDERDN--LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 218 QDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAK 276
           +    ++  D+WS G++L  +L+G  P+  Q +   Q+     E   Y   WK I S+  
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPW-DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 238
Query: 277 QLISSLLTVDPNRRPSAQELLNHPW 301
            L+  +L  +P+ R +  ++    W
Sbjct: 239 ALLHKILVENPSARITIPDIKKDRW 263

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score =  108 bits (271), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 67/233 (28%), Positives = 113/233 (48%), Gaps = 23/233 (9%)
Query: 83  LLTNEILVMRKIVEN---------VSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRI 133
           +L  EI+V  K VE+         +  HP +I ++  ++D   + +I++   GGELF  +
Sbjct: 38  VLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLL 97
Query: 134 VAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS 193
              +R+    A     ++   L  LH  +I++RDLKPEN L     ++  +KI DFG + 
Sbjct: 98  RKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILL---DKNGHIKITDFGFAK 154
Query: 194 VEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQ 253
                D    L G+ DY++PE +         D WS G+++Y +L+GY PF   +  +  
Sbjct: 155 Y--VPDVTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTY 212
Query: 254 QMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR-----PSAQELLNHPW 301
           + I+  E  F        +   K L+S L+T D ++R        +++ NHPW
Sbjct: 213 EKILNAELRFP----PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPW 261

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score =  108 bits (271), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 90/302 (29%), Positives = 144/302 (47%), Gaps = 46/302 (15%)
Query: 11  EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGF 70
            Y + D LG G F  V+ G  +  G  ++VA+K L                         
Sbjct: 17  HYILGDTLGVGTFGKVKVGKHELTG--HKVAVKIL------------------------- 49
Query: 71  FPTRKQVSVSDALLTNEILVMRKIVENVS--PHPNVIDLYDVYEDQNGVHLILELCSGGE 128
              R+++   D      +  +R+ ++N+    HP++I LY V    + + +++E  SGGE
Sbjct: 50  --NRQKIRSLDV-----VGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGE 102
Query: 129 LFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMD 188
           LFD I    R  E  +  + +QI  G+   H+  +VHRDLKPEN L L+   ++  KI D
Sbjct: 103 LFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVL-LDAHMNA--KIAD 159
Query: 189 FGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITS--KSDMWSLGVILYILLSGYPPFIA 246
           FGLS++    + +    GS +Y +PE ++  R+ +  + D+WS GVILY LL G  PF  
Sbjct: 160 FGLSNMMSDGEFLRXSCGSPNYAAPE-VISGRLYAGPEVDIWSSGVILYALLCGTLPFDD 218
Query: 247 QSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDS 306
                  + I  G F     T + ++ S   L+  +L VDP +R + +++  H W   D 
Sbjct: 219 DHVPTLFKKICDGIF----YTPQYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQDL 274
Query: 307 AK 308
            K
Sbjct: 275 PK 276

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score =  108 bits (270), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 71/203 (34%), Positives = 108/203 (53%), Gaps = 10/203 (4%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HP++I LY V        +++E  SGGELFD I    R  E+ A  + +QI   +   H+
Sbjct: 70  HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHR 129
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDR 220
             +VHRDLKPEN L L+   ++  KI DFGLS++    + +    GS +Y +PE ++  R
Sbjct: 130 HMVVHRDLKPENVL-LDAHMNA--KIADFGLSNMMSDGEFLRTSCGSPNYAAPE-VISGR 185
Query: 221 ITS--KSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQL 278
           + +  + D+WS GVILY LL G  PF  +      + I  G F   E     ++ S   L
Sbjct: 186 LYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEY----LNRSVATL 241
Query: 279 ISSLLTVDPNRRPSAQELLNHPW 301
           +  +L VDP +R + +++  H W
Sbjct: 242 LMHMLQVDPLKRATIKDIREHEW 264

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score =  108 bits (270), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 71/203 (34%), Positives = 108/203 (53%), Gaps = 10/203 (4%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HP++I LY V        +++E  SGGELFD I    R  E+ A  + +QI   +   H+
Sbjct: 70  HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHR 129
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDR 220
             +VHRDLKPEN L L+   ++  KI DFGLS++    + +    GS +Y +PE ++  R
Sbjct: 130 HMVVHRDLKPENVL-LDAHMNA--KIADFGLSNMMSDGEFLRDSCGSPNYAAPE-VISGR 185
Query: 221 ITS--KSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQL 278
           + +  + D+WS GVILY LL G  PF  +      + I  G F   E     ++ S   L
Sbjct: 186 LYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEY----LNRSVATL 241
Query: 279 ISSLLTVDPNRRPSAQELLNHPW 301
           +  +L VDP +R + +++  H W
Sbjct: 242 LMHMLQVDPLKRATIKDIREHEW 264

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score =  106 bits (265), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 114/216 (52%), Gaps = 17/216 (7%)
Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           ++I++ V+  P ++ L   ++D + +++++E  +GGE+F  +    R+ E  A     QI
Sbjct: 79  KRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 137
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDY 210
                 LH  ++++RDLKPEN L     E   +++ DFG +  V+G T     L G+ +Y
Sbjct: 138 VLTFEYLHSLDLIYRDLKPENLLI---DEQGYIQVTDFGFAKRVKGRT---WXLCGTPEY 191
Query: 211 VSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKN 270
           ++PE +L        D W+LGV++Y + +GYPPF A    Q  + I++G+  F      +
Sbjct: 192 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----H 247
Query: 271 ISSSAKQLISSLLTVDPNRR-----PSAQELLNHPW 301
            SS  K L+ +LL VD  +R         ++ NH W
Sbjct: 248 FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 283

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score =  106 bits (264), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 114/216 (52%), Gaps = 17/216 (7%)
Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           ++I++ V+  P ++ L   ++D + +++++E   GGE+F  +    R+ E  A     QI
Sbjct: 92  KRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDY 210
                 LH  ++++RDLKPEN +     +   +K+ DFGL+  V+G T     L G+ +Y
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLMI---DQQGYIKVTDFGLAKRVKGRT---WXLCGTPEY 204
Query: 211 VSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKN 270
           ++PE +L        D W+LGV++Y + +GYPPF A    Q  + I++G+  F      +
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----H 260
Query: 271 ISSSAKQLISSLLTVDPNRR-----PSAQELLNHPW 301
            SS  K L+ +LL VD  +R         ++ NH W
Sbjct: 261 FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score =  106 bits (264), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 109/215 (50%), Gaps = 16/215 (7%)
Query: 93  KIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIA 152
           K ++     P ++ L   ++D + ++++LE   GGE+F  +    R+ E  A     QI 
Sbjct: 93  KRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIV 152
Query: 153 EGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDYV 211
                LH  ++++RDLKPEN L     +   +K+ DFG +  V+G T     L G+ +Y+
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLI---DQQGYIKVADFGFAKRVKGRT---WXLCGTPEYL 206
Query: 212 SPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNI 271
           +PE +L        D W+LGV++Y + +GYPPF A    Q  + I++G+  F      + 
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HF 262
Query: 272 SSSAKQLISSLLTVDPNRR-----PSAQELLNHPW 301
           SS  K L+ +LL VD  +R         ++ NH W
Sbjct: 263 SSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 297

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score =  105 bits (263), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 114/216 (52%), Gaps = 17/216 (7%)
Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           ++I++ V+  P ++ L   ++D + +++++E  +GGE+F  +    R+ E  A     QI
Sbjct: 87  KRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQI 145
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDY 210
                 LH  ++++RDLKPEN L     +   +++ DFG +  V+G T     L G+ +Y
Sbjct: 146 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT---WXLCGTPEY 199
Query: 211 VSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKN 270
           ++PE +L        D W+LGV++Y + +GYPPF A    Q  + I++G+  F      +
Sbjct: 200 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----H 255
Query: 271 ISSSAKQLISSLLTVDPNRR-----PSAQELLNHPW 301
            SS  K L+ +LL VD  +R         ++ NH W
Sbjct: 256 FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 291

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score =  105 bits (263), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 114/216 (52%), Gaps = 17/216 (7%)
Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           ++I++ V+  P ++ L   ++D + +++++E  +GGE+F  +    R+ E  A     QI
Sbjct: 92  KRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDY 210
                 LH  ++++RDLKPEN L     +   +++ DFG +  V+G T     L G+ +Y
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT---WXLCGTPEY 204
Query: 211 VSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKN 270
           ++PE +L        D W+LGV++Y + +GYPPF A    Q  + I++G+  F      +
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----H 260
Query: 271 ISSSAKQLISSLLTVDPNRR-----PSAQELLNHPW 301
            SS  K L+ +LL VD  +R         ++ NH W
Sbjct: 261 FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score =  105 bits (263), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 114/216 (52%), Gaps = 17/216 (7%)
Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           ++I++ V+  P ++ L   ++D + +++++E  +GGE+F  +    R+ E  A     QI
Sbjct: 92  KRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDY 210
                 LH  ++++RDLKPEN L     +   +++ DFG +  V+G T     L G+ +Y
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT---WXLXGTPEY 204
Query: 211 VSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKN 270
           ++PE +L        D W+LGV++Y + +GYPPF A    Q  + I++G+  F      +
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----H 260
Query: 271 ISSSAKQLISSLLTVDPNRR-----PSAQELLNHPW 301
            SS  K L+ +LL VD  +R         ++ NH W
Sbjct: 261 FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score =  105 bits (263), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 129/301 (42%), Gaps = 50/301 (16%)
Query: 3   QETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIG----STTPYGFPX 58
           Q  +K  ++++   ILG G FS V   + +    + + AIK L +      +  PY    
Sbjct: 2   QPRKKRPEDFKFGKILGEGSFSTVV--LARELATSREYAIKILEKRHIIKENKVPY---- 55
Query: 59  XXXXXXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVH 118
                                    +T E  VM ++      HP  + LY  ++D   ++
Sbjct: 56  -------------------------VTRERDVMSRL-----DHPFFVKLYFTFQDDEKLY 85
Query: 119 LILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLND 178
             L     GEL   I     + E        +I   L  LH   I+HRDLKPEN L LN 
Sbjct: 86  FGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENIL-LN- 143
Query: 179 REDSPLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY 235
            ED  ++I DFG + V   E          G+  YVSPE L +      SD+W+LG I+Y
Sbjct: 144 -EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIY 202
Query: 236 ILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQE 295
            L++G PPF A +     Q I+  E+ F E+ +      A+ L+  LL +D  +R   +E
Sbjct: 203 QLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PKARDLVEKLLVLDATKRLGCEE 258
Query: 296 L 296
           +
Sbjct: 259 M 259

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score =  105 bits (263), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 129/301 (42%), Gaps = 50/301 (16%)
Query: 3   QETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIG----STTPYGFPX 58
           Q  +K  ++++   ILG G FS V   + +    + + AIK L +      +  PY    
Sbjct: 1   QPRKKRPEDFKFGKILGEGSFSTVV--LARELATSREYAIKILEKRHIIKENKVPY---- 54
Query: 59  XXXXXXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVH 118
                                    +T E  VM ++      HP  + LY  ++D   ++
Sbjct: 55  -------------------------VTRERDVMSRL-----DHPFFVKLYFTFQDDEKLY 84
Query: 119 LILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLND 178
             L     GEL   I     + E        +I   L  LH   I+HRDLKPEN L LN 
Sbjct: 85  FGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENIL-LN- 142
Query: 179 REDSPLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY 235
            ED  ++I DFG + V   E          G+  YVSPE L +      SD+W+LG I+Y
Sbjct: 143 -EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIY 201
Query: 236 ILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQE 295
            L++G PPF A +     Q I+  E+ F E+ +      A+ L+  LL +D  +R   +E
Sbjct: 202 QLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PKARDLVEKLLVLDATKRLGCEE 257
Query: 296 L 296
           +
Sbjct: 258 M 258

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score =  105 bits (262), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 114/216 (52%), Gaps = 17/216 (7%)
Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           ++I++ V+  P ++ L   ++D + +++++E  +GGE+F  +    R+ E  A     QI
Sbjct: 92  KRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDY 210
                 LH  ++++RDLKPEN L     +   +++ DFG +  V+G T     L G+ +Y
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT---WXLCGTPEY 204
Query: 211 VSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKN 270
           ++PE +L        D W+LGV++Y + +GYPPF A    Q  + I++G+  F      +
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----H 260
Query: 271 ISSSAKQLISSLLTVDPNRR-----PSAQELLNHPW 301
            SS  K L+ +LL VD  +R         ++ NH W
Sbjct: 261 FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score =  105 bits (262), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HP  + LY  ++D   ++  L     GEL   I     + E        +I   L  LH 
Sbjct: 89  HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 148
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALL 217
             I+HRDLKPEN L LN  ED  ++I DFG + V   E          G+  YVSPE L 
Sbjct: 149 KGIIHRDLKPENIL-LN--EDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLT 205
Query: 218 QDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQ 277
           +      SD+W+LG I+Y L++G PPF A +     Q I+  E+ F E+ +      A+ 
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PKARD 261
Query: 278 LISSLLTVDPNRRPSAQEL 296
           L+  LL +D  +R   +E+
Sbjct: 262 LVEKLLVLDATKRLGCEEM 280

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score =  105 bits (262), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 114/216 (52%), Gaps = 17/216 (7%)
Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           ++I++ V+  P ++ L   ++D + +++++E  +GGE+F  +    R+ E  A     QI
Sbjct: 92  KRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDY 210
                 LH  ++++RDLKPEN L     +   +++ DFG +  V+G T     L G+ +Y
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT---WXLCGTPEY 204
Query: 211 VSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKN 270
           ++PE +L        D W+LGV++Y + +GYPPF A    Q  + I++G+  F      +
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----H 260
Query: 271 ISSSAKQLISSLLTVDPNRR-----PSAQELLNHPW 301
            SS  K L+ +LL VD  +R         ++ NH W
Sbjct: 261 FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score =  105 bits (262), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 114/216 (52%), Gaps = 17/216 (7%)
Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           ++I++ V+  P ++ L   ++D + +++++E  +GGE+F  +    R+ E  A     QI
Sbjct: 113 KRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQI 171
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDY 210
                 LH  ++++RDLKPEN L     +   +++ DFG +  V+G T     L G+ +Y
Sbjct: 172 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT---WXLCGTPEY 225
Query: 211 VSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKN 270
           ++PE +L        D W+LGV++Y + +GYPPF A    Q  + I++G+  F      +
Sbjct: 226 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----H 281
Query: 271 ISSSAKQLISSLLTVDPNRR-----PSAQELLNHPW 301
            SS  K L+ +LL VD  +R         ++ NH W
Sbjct: 282 FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 317

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score =  105 bits (262), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 114/216 (52%), Gaps = 17/216 (7%)
Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           ++I++ V+  P ++ L   ++D + +++++E  +GGE+F  +    R+ E  A     QI
Sbjct: 92  KRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQI 150
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDY 210
                 LH  ++++RDLKPEN L     +   +++ DFG +  V+G T     L G+ +Y
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT---WXLCGTPEY 204
Query: 211 VSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKN 270
           ++PE +L        D W+LGV++Y + +GYPPF A    Q  + I++G+  F      +
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----H 260
Query: 271 ISSSAKQLISSLLTVDPNRR-----PSAQELLNHPW 301
            SS  K L+ +LL VD  +R         ++ NH W
Sbjct: 261 FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score =  105 bits (262), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 113/216 (52%), Gaps = 17/216 (7%)
Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           ++I++ V+  P ++ L   ++D + +++++E   GGE+F  +    R+ E  A     QI
Sbjct: 92  KRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDY 210
                 LH  ++++RDLKPEN L     +   +K+ DFG +  V+G T     L G+ +Y
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIKVADFGFAKRVKGRT---WXLCGTPEY 204
Query: 211 VSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKN 270
           ++PE +L        D W+LGV++Y + +GYPPF A    Q  + I++G+  F      +
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----H 260
Query: 271 ISSSAKQLISSLLTVDPNRR-----PSAQELLNHPW 301
            SS  K L+ +LL VD  +R         ++ NH W
Sbjct: 261 FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score =  105 bits (262), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 114/216 (52%), Gaps = 17/216 (7%)
Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           ++I++ V+  P ++ L   ++D + +++++E  +GGE+F  +    R+ E  A     QI
Sbjct: 92  KRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDY 210
                 LH  ++++RDLKPEN L     +   +++ DFG +  V+G T     L G+ +Y
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT---WXLCGTPEY 204
Query: 211 VSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKN 270
           ++PE +L        D W+LGV++Y + +GYPPF A    Q  + I++G+  F      +
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKVRFPS----H 260
Query: 271 ISSSAKQLISSLLTVDPNRR-----PSAQELLNHPW 301
            SS  K L+ +LL VD  +R         ++ NH W
Sbjct: 261 FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score =  105 bits (262), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 113/216 (52%), Gaps = 17/216 (7%)
Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           ++I++ V+  P ++ L   ++D + +++++E   GGE+F  +    R+ E  A     QI
Sbjct: 92  KRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDY 210
                 LH  ++++RDLKPEN +     +   +K+ DFG +  V+G T     L G+ +Y
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLMI---DQQGYIKVTDFGFAKRVKGRT---WXLCGTPEY 204
Query: 211 VSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKN 270
           ++PE +L        D W+LGV++Y + +GYPPF A    Q  + I++G+  F      +
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----H 260
Query: 271 ISSSAKQLISSLLTVDPNRR-----PSAQELLNHPW 301
            SS  K L+ +LL VD  +R         ++ NH W
Sbjct: 261 FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score =  105 bits (262), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 114/216 (52%), Gaps = 17/216 (7%)
Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           ++I++ V+  P ++ L   ++D + +++++E  +GGE+F  +    R+ E  A     QI
Sbjct: 92  KRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDY 210
                 LH  ++++RDLKPEN L     +   +++ DFG +  V+G T     L G+ +Y
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT---WXLAGTPEY 204
Query: 211 VSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKN 270
           ++PE +L        D W+LGV++Y + +GYPPF A    Q  + I++G+  F      +
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----H 260
Query: 271 ISSSAKQLISSLLTVDPNRR-----PSAQELLNHPW 301
            SS  K L+ +LL VD  +R         ++ NH W
Sbjct: 261 FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score =  105 bits (262), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 114/216 (52%), Gaps = 17/216 (7%)
Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           ++I++ V+  P ++ L   ++D + +++++E  +GGE+F  +    R+ E  A     QI
Sbjct: 92  KRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDY 210
                 LH  ++++RDLKPEN L     +   +++ DFG +  V+G T     L G+ +Y
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT---WXLCGTPEY 204
Query: 211 VSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKN 270
           ++PE +L        D W+LGV++Y + +GYPPF A    Q  + I++G+  F      +
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----H 260
Query: 271 ISSSAKQLISSLLTVDPNRR-----PSAQELLNHPW 301
            SS  K L+ +LL VD  +R         ++ NH W
Sbjct: 261 FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score =  105 bits (262), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 73/232 (31%), Positives = 108/232 (46%), Gaps = 18/232 (7%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HP  + LY  ++D   ++  L     GEL   I     + E        +I   L  LH 
Sbjct: 88  HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 147
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALL 217
             I+HRDLKPEN L LN  ED  ++I DFG + V   E          G+  YVSPE L 
Sbjct: 148 KGIIHRDLKPENIL-LN--EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 204
Query: 218 QDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQ 277
           +      SD+W+LG I+Y L++G PPF A +     Q I+  E+ F E+ +      A+ 
Sbjct: 205 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PKARD 260
Query: 278 LISSLLTVDPNRRPSAQE------LLNHPWVIGDSAKEEEMDAEIVSRLQSF 323
           L+  LL +D  +R   +E      L  HP+   +S   E +  +   +L ++
Sbjct: 261 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFF--ESVTWENLHQQTPPKLTAY 310

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score =  105 bits (262), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 116/216 (53%), Gaps = 17/216 (7%)
Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           ++I++ V+  P ++ L   ++D + +++++E  +GGE+F  +    R+ E  A     QI
Sbjct: 92  KRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDY 210
                 LH  ++++RDLKPEN L     +   +++ DFG +  V+G T     L G+ +Y
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT---WXLCGTPEY 204
Query: 211 VSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKN 270
           ++PE +L        D W+LGV++Y + +GYPPF A    Q  + I++G+  F      +
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----H 260
Query: 271 ISSSAKQLISSLLTVDPNRR----PSA-QELLNHPW 301
            SS  K L+ +LL VD  +R    P+   ++ NH W
Sbjct: 261 FSSDLKDLLRNLLQVDLTKRFGNLPNGVNDIKNHKW 296

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score =  105 bits (262), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 129/301 (42%), Gaps = 50/301 (16%)
Query: 3   QETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIG----STTPYGFPX 58
           Q  +K  ++++   ILG G FS V   + +    + + AIK L +      +  PY    
Sbjct: 3   QPRKKRPEDFKFGKILGEGSFSTVV--LARELATSREYAIKILEKRHIIKENKVPY---- 56
Query: 59  XXXXXXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVH 118
                                    +T E  VM ++      HP  + LY  ++D   ++
Sbjct: 57  -------------------------VTRERDVMSRL-----DHPFFVKLYFTFQDDEKLY 86
Query: 119 LILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLND 178
             L     GEL   I     + E        +I   L  LH   I+HRDLKPEN L LN 
Sbjct: 87  FGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENIL-LN- 144
Query: 179 REDSPLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY 235
            ED  ++I DFG + V   E          G+  YVSPE L +      SD+W+LG I+Y
Sbjct: 145 -EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIY 203
Query: 236 ILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQE 295
            L++G PPF A +     Q I+  E+ F E+ +      A+ L+  LL +D  +R   +E
Sbjct: 204 QLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PKARDLVEKLLVLDATKRLGCEE 259
Query: 296 L 296
           +
Sbjct: 260 M 260

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score =  105 bits (261), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 114/216 (52%), Gaps = 17/216 (7%)
Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           ++I++ V+  P ++ L   ++D + +++++E  +GGE+F  +    R+ E  A     QI
Sbjct: 92  KRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDY 210
                 LH  ++++RDLKPEN L     +   +++ DFG +  V+G T     L G+ +Y
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT---WXLCGTPEY 204
Query: 211 VSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKN 270
           ++PE +L        D W+LGV++Y + +GYPPF A    Q  + I++G+  F      +
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVRFPS----H 260
Query: 271 ISSSAKQLISSLLTVDPNRR-----PSAQELLNHPW 301
            SS  K L+ +LL VD  +R         ++ NH W
Sbjct: 261 FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score =  105 bits (261), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 114/216 (52%), Gaps = 17/216 (7%)
Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           ++I++ V+  P ++ L   ++D + +++++E  +GGE+F  +    R+ E  A     QI
Sbjct: 93  KRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDY 210
                 LH  ++++RDLKPEN L     +   +++ DFG +  V+G T     L G+ +Y
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT---WXLCGTPEY 205
Query: 211 VSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKN 270
           ++PE +L        D W+LGV++Y + +GYPPF A    Q  + I++G+  F      +
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----H 261
Query: 271 ISSSAKQLISSLLTVDPNRR-----PSAQELLNHPW 301
            SS  K L+ +LL VD  +R         ++ NH W
Sbjct: 262 FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 297

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score =  105 bits (261), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 87/293 (29%), Positives = 137/293 (46%), Gaps = 45/293 (15%)
Query: 12  YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFF 71
           Y++   LG G F  V+     T G+  +VA+K +                          
Sbjct: 16  YQIVKTLGEGSFGKVKLAYHTTTGQ--KVALKII-------------------------- 47
Query: 72  PTRKQVSVSD--ALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
             +K ++ SD    +  EI  +R +      HP++I LYDV + ++ + +++E  +G EL
Sbjct: 48  -NKKVLAKSDMQGRIEREISYLRLL-----RHPHIIKLYDVIKSKDEIIMVIEY-AGNEL 100
Query: 130 FDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDF 189
           FD IV +++  E  A    +QI   +   H+  IVHRDLKPEN L     E   +KI DF
Sbjct: 101 FDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL---DEHLNVKIADF 157
Query: 190 GLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITS-KSDMWSLGVILYILLSGYPPFIAQS 248
           GLS++    + +    GS +Y +PE +        + D+WS GVILY++L    PF  +S
Sbjct: 158 GLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES 217
Query: 249 NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPW 301
                + I  G ++      K +S  A  LI  +L V+P  R S  E++   W
Sbjct: 218 IPVLFKNISNGVYTLP----KFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDW 266

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score =  105 bits (261), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 114/216 (52%), Gaps = 17/216 (7%)
Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           ++I++ V+  P ++ L   ++D + +++++E  +GGE+F  +    R+ E  A     QI
Sbjct: 92  KRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDY 210
                 LH  ++++RDLKPEN L     +   +++ DFG +  V+G T     L G+ +Y
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT---WXLCGTPEY 204
Query: 211 VSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKN 270
           ++PE +L        D W+LGV++Y + +GYPPF A    Q  + I++G+  F      +
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----H 260
Query: 271 ISSSAKQLISSLLTVDPNRR-----PSAQELLNHPW 301
            SS  K L+ +LL VD  +R         ++ NH W
Sbjct: 261 FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score =  105 bits (261), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 114/216 (52%), Gaps = 17/216 (7%)
Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           ++I++ V+  P ++ L   ++D + +++++E  +GGE+F  +    R+ E  A     QI
Sbjct: 92  KRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDY 210
                 LH  ++++RDLKPEN L     +   +++ DFG +  V+G T     L G+ +Y
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT---WXLCGTPEY 204
Query: 211 VSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKN 270
           ++PE +L        D W+LGV++Y + +GYPPF A    Q  + I++G+  F      +
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----H 260
Query: 271 ISSSAKQLISSLLTVDPNRR-----PSAQELLNHPW 301
            SS  K L+ +LL VD  +R         ++ NH W
Sbjct: 261 FSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKW 296

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score =  105 bits (261), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 114/216 (52%), Gaps = 17/216 (7%)
Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           ++I++ V+  P ++ L   ++D + +++++E  +GGE+F  +    R+ E  A     QI
Sbjct: 113 KRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 171
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDY 210
                 LH  ++++RDLKPEN L     +   +++ DFG +  V+G T     L G+ +Y
Sbjct: 172 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGAT---WTLCGTPEY 225
Query: 211 VSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKN 270
           ++PE +L        D W+LGV++Y + +GYPPF A    Q  + I++G+  F      +
Sbjct: 226 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----H 281
Query: 271 ISSSAKQLISSLLTVDPNRR-----PSAQELLNHPW 301
            SS  K L+ +LL VD  +R         ++ NH W
Sbjct: 282 FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 317

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score =  105 bits (261), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 87/293 (29%), Positives = 137/293 (46%), Gaps = 45/293 (15%)
Query: 12  YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFF 71
           Y++   LG G F  V+     T G+  +VA+K +                          
Sbjct: 15  YQIVKTLGEGSFGKVKLAYHTTTGQ--KVALKII-------------------------- 46
Query: 72  PTRKQVSVSD--ALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
             +K ++ SD    +  EI  +R +      HP++I LYDV + ++ + +++E  +G EL
Sbjct: 47  -NKKVLAKSDMQGRIEREISYLRLL-----RHPHIIKLYDVIKSKDEIIMVIEY-AGNEL 99
Query: 130 FDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDF 189
           FD IV +++  E  A    +QI   +   H+  IVHRDLKPEN L     E   +KI DF
Sbjct: 100 FDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL---DEHLNVKIADF 156
Query: 190 GLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITS-KSDMWSLGVILYILLSGYPPFIAQS 248
           GLS++    + +    GS +Y +PE +        + D+WS GVILY++L    PF  +S
Sbjct: 157 GLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES 216
Query: 249 NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPW 301
                + I  G ++      K +S  A  LI  +L V+P  R S  E++   W
Sbjct: 217 IPVLFKNISNGVYTL----PKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDW 265

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score =  105 bits (261), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 113/216 (52%), Gaps = 17/216 (7%)
Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           ++I++ V+  P ++ L   ++D + +++++E   GGE+F  +    R+ E  A     QI
Sbjct: 92  KRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDY 210
                 LH  ++++RDLKPEN +     +   +K+ DFG +  V+G T     L G+ +Y
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLMI---DQQGYIKVTDFGFAKRVKGRT---WXLCGTPEY 204
Query: 211 VSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKN 270
           ++PE +L        D W+LGV++Y + +GYPPF A    Q  + I++G+  F      +
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----H 260
Query: 271 ISSSAKQLISSLLTVDPNRR-----PSAQELLNHPW 301
            SS  K L+ +LL VD  +R         ++ NH W
Sbjct: 261 FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score =  105 bits (261), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HP  + LY  ++D   ++  L     GEL   I     + E        +I   L  LH 
Sbjct: 92  HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 151
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALL 217
             I+HRDLKPEN L LN  ED  ++I DFG + V   E          G+  YVSPE L 
Sbjct: 152 KGIIHRDLKPENIL-LN--EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 208
Query: 218 QDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQ 277
           +      SD+W+LG I+Y L++G PPF A +     Q I+  E+ F E+ +      A+ 
Sbjct: 209 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PKARD 264
Query: 278 LISSLLTVDPNRRPSAQEL 296
           L+  LL +D  +R   +E+
Sbjct: 265 LVEKLLVLDATKRLGCEEM 283

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score =  105 bits (261), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 113/216 (52%), Gaps = 17/216 (7%)
Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           ++I++ V+  P ++ L   ++D + +++++E   GGE+F  +    R+ E  A     QI
Sbjct: 93  KRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDY 210
                 LH  ++++RDLKPEN +     +   +K+ DFG +  V+G T     L G+ +Y
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLMI---DQQGYIKVTDFGFAKRVKGRT---WXLCGTPEY 205
Query: 211 VSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKN 270
           ++PE +L        D W+LGV++Y + +GYPPF A    Q  + I++G+  F      +
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----H 261
Query: 271 ISSSAKQLISSLLTVDPNRR-----PSAQELLNHPW 301
            SS  K L+ +LL VD  +R         ++ NH W
Sbjct: 262 FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 297

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score =  105 bits (261), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HP  + LY  ++D   ++  L     GEL   I     + E        +I   L  LH 
Sbjct: 66  HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 125
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALL 217
             I+HRDLKPEN L LN  ED  ++I DFG + V   E          G+  YVSPE L 
Sbjct: 126 KGIIHRDLKPENIL-LN--EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 182
Query: 218 QDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQ 277
           +      SD+W+LG I+Y L++G PPF A +     Q I+  E+ F E+ +      A+ 
Sbjct: 183 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PKARD 238
Query: 278 LISSLLTVDPNRRPSAQEL 296
           L+  LL +D  +R   +E+
Sbjct: 239 LVEKLLVLDATKRLGCEEM 257

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score =  105 bits (261), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HP  + LY  ++D   ++  L     GEL   I     + E        +I   L  LH 
Sbjct: 73  HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 132
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALL 217
             I+HRDLKPEN L LN  ED  ++I DFG + V   E          G+  YVSPE L 
Sbjct: 133 KGIIHRDLKPENIL-LN--EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 189
Query: 218 QDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQ 277
           +      SD+W+LG I+Y L++G PPF A +     Q I+  E+ F E+ +      A+ 
Sbjct: 190 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PKARD 245
Query: 278 LISSLLTVDPNRRPSAQEL 296
           L+  LL +D  +R   +E+
Sbjct: 246 LVEKLLVLDATKRLGCEEM 264

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score =  104 bits (260), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 114/216 (52%), Gaps = 17/216 (7%)
Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           ++I++ V+  P ++ L   ++D + +++++E   GGE+F  +    R+ E  A     QI
Sbjct: 92  KRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDY 210
                 LH  ++++RDLKPEN +     +   +++ DFGL+  V+G T     L G+ +Y
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLMI---DQQGYIQVTDFGLAKRVKGRT---WXLCGTPEY 204
Query: 211 VSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKN 270
           ++PE +L        D W+LGV++Y + +GYPPF A    Q  + I++G+  F      +
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----H 260
Query: 271 ISSSAKQLISSLLTVDPNRR-----PSAQELLNHPW 301
            SS  K L+ +LL VD  +R         ++ NH W
Sbjct: 261 FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score =  104 bits (260), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 73/232 (31%), Positives = 108/232 (46%), Gaps = 18/232 (7%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HP  + LY  ++D   ++  L     GEL   I     + E        +I   L  LH 
Sbjct: 88  HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 147
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALL 217
             I+HRDLKPEN L LN  ED  ++I DFG + V   E          G+  YVSPE L 
Sbjct: 148 KGIIHRDLKPENIL-LN--EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 204
Query: 218 QDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQ 277
           +      SD+W+LG I+Y L++G PPF A +     Q I+  E+ F E+ +      A+ 
Sbjct: 205 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PKARD 260
Query: 278 LISSLLTVDPNRRPSAQE------LLNHPWVIGDSAKEEEMDAEIVSRLQSF 323
           L+  LL +D  +R   +E      L  HP+   +S   E +  +   +L ++
Sbjct: 261 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFF--ESVTWENLHQQTPPKLTAY 310

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score =  104 bits (260), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 87/293 (29%), Positives = 137/293 (46%), Gaps = 45/293 (15%)
Query: 12  YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFF 71
           Y++   LG G F  V+     T G+  +VA+K +                          
Sbjct: 6   YQIVKTLGEGSFGKVKLAYHTTTGQ--KVALKII-------------------------- 37
Query: 72  PTRKQVSVSD--ALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
             +K ++ SD    +  EI  +R +      HP++I LYDV + ++ + +++E  +G EL
Sbjct: 38  -NKKVLAKSDMQGRIEREISYLRLL-----RHPHIIKLYDVIKSKDEIIMVIEY-AGNEL 90
Query: 130 FDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDF 189
           FD IV +++  E  A    +QI   +   H+  IVHRDLKPEN L     E   +KI DF
Sbjct: 91  FDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL---DEHLNVKIADF 147
Query: 190 GLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITS-KSDMWSLGVILYILLSGYPPFIAQS 248
           GLS++    + +    GS +Y +PE +        + D+WS GVILY++L    PF  +S
Sbjct: 148 GLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES 207
Query: 249 NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPW 301
                + I  G ++      K +S  A  LI  +L V+P  R S  E++   W
Sbjct: 208 IPVLFKNISNGVYTLP----KFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDW 256

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score =  104 bits (260), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 87/293 (29%), Positives = 137/293 (46%), Gaps = 45/293 (15%)
Query: 12  YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFF 71
           Y++   LG G F  V+     T G+  +VA+K +                          
Sbjct: 10  YQIVKTLGEGSFGKVKLAYHTTTGQ--KVALKII-------------------------- 41
Query: 72  PTRKQVSVSD--ALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
             +K ++ SD    +  EI  +R +      HP++I LYDV + ++ + +++E  +G EL
Sbjct: 42  -NKKVLAKSDMQGRIEREISYLRLL-----RHPHIIKLYDVIKSKDEIIMVIEY-AGNEL 94
Query: 130 FDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDF 189
           FD IV +++  E  A    +QI   +   H+  IVHRDLKPEN L     E   +KI DF
Sbjct: 95  FDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL---DEHLNVKIADF 151
Query: 190 GLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITS-KSDMWSLGVILYILLSGYPPFIAQS 248
           GLS++    + +    GS +Y +PE +        + D+WS GVILY++L    PF  +S
Sbjct: 152 GLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES 211
Query: 249 NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPW 301
                + I  G ++      K +S  A  LI  +L V+P  R S  E++   W
Sbjct: 212 IPVLFKNISNGVYTLP----KFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDW 260

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score =  104 bits (260), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 114/216 (52%), Gaps = 17/216 (7%)
Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           ++I++ V+  P ++ L   ++D + +++++E  +GGE+F  +    R+ E  A     QI
Sbjct: 92  KRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDY 210
                 LH  ++++RDLKPEN L     +   +++ DFG +  V+G T     L G+ +Y
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT---WXLCGTPEY 204
Query: 211 VSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKN 270
           ++PE +L        D W+LGV++Y + +GYPPF A    Q  + I++G+  F      +
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----H 260
Query: 271 ISSSAKQLISSLLTVD-----PNRRPSAQELLNHPW 301
            SS  K L+ +LL VD      N +    ++ NH W
Sbjct: 261 FSSDLKDLLRNLLQVDLTKAFGNLKNGVNDIKNHKW 296

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score =  104 bits (260), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 113/216 (52%), Gaps = 17/216 (7%)
Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           ++I++ V+  P ++ L   ++D + +++++E   GGE+F  +    R+ E  A     QI
Sbjct: 92  KRILQAVN-FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDY 210
                 LH  ++++RDLKPEN L     +   +++ DFG +  V+G T     L G+ +Y
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT---WXLCGTPEY 204
Query: 211 VSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKN 270
           ++PE +L        D W+LGV++Y + +GYPPF A    Q  + I++G+  F      +
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----H 260
Query: 271 ISSSAKQLISSLLTVDPNRR-----PSAQELLNHPW 301
            SS  K L+ +LL VD  +R         ++ NH W
Sbjct: 261 FSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKW 296

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score =  104 bits (260), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HP  + LY  ++D   ++  L     GEL   I     + E        +I   L  LH 
Sbjct: 91  HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALL 217
             I+HRDLKPEN L LN  ED  ++I DFG + V   E          G+  YVSPE L 
Sbjct: 151 KGIIHRDLKPENIL-LN--EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 218 QDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQ 277
           +      SD+W+LG I+Y L++G PPF A +     Q I+  E+ F E+ +      A+ 
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PKARD 263
Query: 278 LISSLLTVDPNRRPSAQEL 296
           L+  LL +D  +R   +E+
Sbjct: 264 LVEKLLVLDATKRLGCEEM 282

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score =  104 bits (260), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HP  + LY  ++D   ++  L     GEL   I     + E        +I   L  LH 
Sbjct: 89  HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 148
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALL 217
             I+HRDLKPEN L LN  ED  ++I DFG + V   E          G+  YVSPE L 
Sbjct: 149 KGIIHRDLKPENIL-LN--EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 218 QDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQ 277
           +      SD+W+LG I+Y L++G PPF A +     Q I+  E+ F E+ +      A+ 
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PKARD 261
Query: 278 LISSLLTVDPNRRPSAQEL 296
           L+  LL +D  +R   +E+
Sbjct: 262 LVEKLLVLDATKRLGCEEM 280

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score =  104 bits (260), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HP  + LY  ++D   ++  L     GEL   I     + E        +I   L  LH 
Sbjct: 89  HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 148
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALL 217
             I+HRDLKPEN L LN  ED  ++I DFG + V   E          G+  YVSPE L 
Sbjct: 149 KGIIHRDLKPENIL-LN--EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 218 QDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQ 277
           +      SD+W+LG I+Y L++G PPF A +     Q I+  E+ F E+ +      A+ 
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PKARD 261
Query: 278 LISSLLTVDPNRRPSAQEL 296
           L+  LL +D  +R   +E+
Sbjct: 262 LVEKLLVLDATKRLGCEEM 280

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score =  104 bits (260), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HP  + LY  ++D   ++  L     GEL   I     + E        +I   L  LH 
Sbjct: 91  HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALL 217
             I+HRDLKPEN L LN  ED  ++I DFG + V   E          G+  YVSPE L 
Sbjct: 151 KGIIHRDLKPENIL-LN--EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 218 QDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQ 277
           +      SD+W+LG I+Y L++G PPF A +     Q I+  E+ F E+ +      A+ 
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PKARD 263
Query: 278 LISSLLTVDPNRRPSAQEL 296
           L+  LL +D  +R   +E+
Sbjct: 264 LVEKLLVLDATKRLGCEEM 282

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score =  104 bits (260), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HP  + LY  ++D   ++  L     GEL   I     + E        +I   L  LH 
Sbjct: 91  HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALL 217
             I+HRDLKPEN L LN  ED  ++I DFG + V   E          G+  YVSPE L 
Sbjct: 151 KGIIHRDLKPENIL-LN--EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 218 QDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQ 277
           +      SD+W+LG I+Y L++G PPF A +     Q I+  E+ F E+ +      A+ 
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PKARD 263
Query: 278 LISSLLTVDPNRRPSAQEL 296
           L+  LL +D  +R   +E+
Sbjct: 264 LVEKLLVLDATKRLGCEEM 282

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score =  104 bits (260), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 113/216 (52%), Gaps = 17/216 (7%)
Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           ++I++ V+  P ++ L   ++D + +++++E   GGE+F  +    R+ E  A     QI
Sbjct: 92  KRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDY 210
                 LH  ++++RDLKPEN L     +   +++ DFG +  V+G T     L G+ +Y
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT---WXLCGTPEY 204
Query: 211 VSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKN 270
           ++PE +L        D W+LGV++Y + +GYPPF A    Q  + I++G+  F      +
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----H 260
Query: 271 ISSSAKQLISSLLTVDPNRR-----PSAQELLNHPW 301
            SS  K L+ +LL VD  +R         ++ NH W
Sbjct: 261 FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score =  104 bits (260), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 113/216 (52%), Gaps = 17/216 (7%)
Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           ++I++ V+  P ++ L   ++D + +++++E   GGE+F  +    R+ E  A     QI
Sbjct: 93  KRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDY 210
                 LH  ++++RDLKPEN L     +   +++ DFG +  V+G T     L G+ +Y
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT---WXLCGTPEY 205
Query: 211 VSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKN 270
           ++PE +L        D W+LGV++Y + +GYPPF A    Q  + I++G+  F      +
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----H 261
Query: 271 ISSSAKQLISSLLTVDPNRR-----PSAQELLNHPW 301
            SS  K L+ +LL VD  +R         ++ NH W
Sbjct: 262 FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIXNHKW 297

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score =  104 bits (260), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HP  + LY  ++D   ++  L     GEL   I     + E        +I   L  LH 
Sbjct: 89  HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 148
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALL 217
             I+HRDLKPEN L LN  ED  ++I DFG + V   E          G+  YVSPE L 
Sbjct: 149 KGIIHRDLKPENIL-LN--EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 218 QDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQ 277
           +      SD+W+LG I+Y L++G PPF A +     Q I+  E+ F E+ +      A+ 
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PKARD 261
Query: 278 LISSLLTVDPNRRPSAQEL 296
           L+  LL +D  +R   +E+
Sbjct: 262 LVEKLLVLDATKRLGCEEM 280

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score =  104 bits (260), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HP  + LY  ++D   ++  L     GEL   I     + E        +I   L  LH 
Sbjct: 92  HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 151
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALL 217
             I+HRDLKPEN L LN  ED  ++I DFG + V   E          G+  YVSPE L 
Sbjct: 152 KGIIHRDLKPENIL-LN--EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 208
Query: 218 QDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQ 277
           +      SD+W+LG I+Y L++G PPF A +     Q I+  E+ F E+ +      A+ 
Sbjct: 209 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PKARD 264
Query: 278 LISSLLTVDPNRRPSAQEL 296
           L+  LL +D  +R   +E+
Sbjct: 265 LVEKLLVLDATKRLGCEEM 283

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score =  104 bits (260), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 113/216 (52%), Gaps = 17/216 (7%)
Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           ++I++ V+  P ++ L   ++D + +++++E   GGE+F  +    R+ E  A     QI
Sbjct: 92  KRILQAVN-FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDY 210
                 LH  ++++RDLKPEN L     +   +++ DFG +  V+G T     L G+ +Y
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT---WXLCGTPEY 204
Query: 211 VSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKN 270
           ++PE +L        D W+LGV++Y + +GYPPF A    Q  + I++G+  F      +
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----H 260
Query: 271 ISSSAKQLISSLLTVDPNRR-----PSAQELLNHPW 301
            SS  K L+ +LL VD  +R         ++ NH W
Sbjct: 261 FSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKW 296

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score =  104 bits (260), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 113/216 (52%), Gaps = 17/216 (7%)
Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           ++I++ V+  P ++ L   ++D + +++++E   GGE+F  +    R+ E  A     QI
Sbjct: 85  KRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQI 143
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDY 210
                 LH  ++++RDLKPEN L     +   +++ DFG +  V+G T     L G+ +Y
Sbjct: 144 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT---WXLCGTPEY 197
Query: 211 VSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKN 270
           ++PE +L        D W+LGV++Y + +GYPPF A    Q  + I++G+  F      +
Sbjct: 198 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----H 253
Query: 271 ISSSAKQLISSLLTVDPNRR-----PSAQELLNHPW 301
            SS  K L+ +LL VD  +R         ++ NH W
Sbjct: 254 FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 289

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score =  104 bits (260), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 113/216 (52%), Gaps = 17/216 (7%)
Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           ++I++ V+  P ++ L   ++D + +++++E   GGE+F  +    R+ E  A     QI
Sbjct: 92  KRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDY 210
                 LH  ++++RDLKPEN L     +   +++ DFG +  V+G T     L G+ +Y
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT---WXLCGTPEY 204
Query: 211 VSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKN 270
           ++PE +L        D W+LGV++Y + +GYPPF A    Q  + I++G+  F      +
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----H 260
Query: 271 ISSSAKQLISSLLTVDPNRR-----PSAQELLNHPW 301
            SS  K L+ +LL VD  +R         ++ NH W
Sbjct: 261 FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score =  104 bits (259), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 113/216 (52%), Gaps = 17/216 (7%)
Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           ++I++ V+  P ++ L   ++D + +++++E   GGE+F  +    R+ E  A     QI
Sbjct: 93  KRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQI 151
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDY 210
                 LH  ++++RDLKPEN L     +   +++ DFG +  V+G T     L G+ +Y
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT---WXLCGTPEY 205
Query: 211 VSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKN 270
           ++PE +L        D W+LGV++Y + +GYPPF A    Q  + I++G+  F      +
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----H 261
Query: 271 ISSSAKQLISSLLTVDPNRR-----PSAQELLNHPW 301
            SS  K L+ +LL VD  +R         ++ NH W
Sbjct: 262 FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 297

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score =  104 bits (259), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HP  + LY  ++D   ++  L     GEL   I     + E        +I   L  LH 
Sbjct: 96  HPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 155
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALL 217
             I+HRDLKPEN L LN  ED  ++I DFG + V   E          G+  YVSPE L 
Sbjct: 156 KGIIHRDLKPENIL-LN--EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 212
Query: 218 QDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQ 277
           +      SD+W+LG I+Y L++G PPF A +     Q I+  E+ F E+ +      A+ 
Sbjct: 213 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PKARD 268
Query: 278 LISSLLTVDPNRRPSAQEL 296
           L+  LL +D  +R   +E+
Sbjct: 269 LVEKLLVLDATKRLGCEEM 287

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score =  104 bits (259), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 113/216 (52%), Gaps = 17/216 (7%)
Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           ++I++ V+  P ++ L   ++D + +++++E   GGE+F  +    R+ E  A     QI
Sbjct: 92  KRILQAVN-FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDY 210
                 LH  ++++RDLKPEN L     +   +++ DFG +  V+G T     L G+ +Y
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT---WXLCGTPEY 204
Query: 211 VSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKN 270
           ++PE +L        D W+LGV++Y + +GYPPF A    Q  + I++G+  F      +
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----H 260
Query: 271 ISSSAKQLISSLLTVDPNRR-----PSAQELLNHPW 301
            SS  K L+ +LL VD  +R         ++ NH W
Sbjct: 261 FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score =  104 bits (259), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 113/216 (52%), Gaps = 17/216 (7%)
Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           ++I++ V+  P ++ L   ++D + +++++E   GGE+F  +    R+ E  A     QI
Sbjct: 78  KRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 136
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDY 210
                 LH  ++++RDLKPEN L     +   +++ DFG +  V+G T     L G+ +Y
Sbjct: 137 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT---WTLCGTPEY 190
Query: 211 VSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKN 270
           ++PE +L        D W+LGV++Y + +GYPPF A    Q  + I++G+  F      +
Sbjct: 191 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----H 246
Query: 271 ISSSAKQLISSLLTVDPNRR-----PSAQELLNHPW 301
            SS  K L+ +LL VD  +R         ++ NH W
Sbjct: 247 FSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKW 282

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score =  104 bits (259), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 113/216 (52%), Gaps = 17/216 (7%)
Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           ++I++ V+  P ++ L   ++D + +++++E   GGE+F  +    R+ E  A     QI
Sbjct: 92  KRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDY 210
                 LH  ++++RDLKPEN L     +   +++ DFG +  V+G T     L G+ +Y
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT---WXLCGTPEY 204
Query: 211 VSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKN 270
           ++PE +L        D W+LGV++Y + +GYPPF A    Q  + I++G+  F      +
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----H 260
Query: 271 ISSSAKQLISSLLTVDPNRR-----PSAQELLNHPW 301
            SS  K L+ +LL VD  +R         ++ NH W
Sbjct: 261 FSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKW 296

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score =  104 bits (259), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 113/216 (52%), Gaps = 17/216 (7%)
Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           ++I++ V+  P ++ L   ++D + +++++E   GGE+F  +    R+ E  A     QI
Sbjct: 92  KRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDY 210
                 LH  ++++RDLKPEN L     +   +++ DFG +  V+G T     L G+ +Y
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT---WXLCGTPEY 204
Query: 211 VSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKN 270
           ++PE +L        D W+LGV++Y + +GYPPF A    Q  + I++G+  F      +
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----H 260
Query: 271 ISSSAKQLISSLLTVDPNRR-----PSAQELLNHPW 301
            SS  K L+ +LL VD  +R         ++ NH W
Sbjct: 261 FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score =  104 bits (259), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 113/216 (52%), Gaps = 17/216 (7%)
Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           ++I++ V+  P ++ L   ++D + +++++E   GGE+F  +    R+ E  A     QI
Sbjct: 93  KRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDY 210
                 LH  ++++RDLKPEN L     +   +++ DFG +  V+G T     L G+ +Y
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT---WTLCGTPEY 205
Query: 211 VSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKN 270
           ++PE +L        D W+LGV++Y + +GYPPF A    Q  + I++G+  F      +
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----H 261
Query: 271 ISSSAKQLISSLLTVDPNRR-----PSAQELLNHPW 301
            SS  K L+ +LL VD  +R         ++ NH W
Sbjct: 262 FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 297

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score =  104 bits (259), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 68/221 (30%), Positives = 111/221 (50%), Gaps = 7/221 (3%)
Query: 74  RKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRI 133
           +K   V  A  T      R+++E++   P ++ L+  ++ +  +HLIL+  +GGELF  +
Sbjct: 91  KKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHL 150
Query: 134 VAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS 193
             +ER+ E      + +I   L  LH+  I++RD+K EN L      +  + + DFGLS 
Sbjct: 151 SQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILL---DSNGHVVLTDFGLSK 207
Query: 194 --VEGYTDPVVGLFGSIDYVSPEALL-QDRITSKS-DMWSLGVILYILLSGYPPFIAQSN 249
             V   T+      G+I+Y++P+ +   D    K+ D WSLGV++Y LL+G  PF     
Sbjct: 208 EFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGE 267
Query: 250 RQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR 290
           +  Q  I            + +S+ AK LI  LL  DP +R
Sbjct: 268 KNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKR 308

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score =  104 bits (259), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 113/216 (52%), Gaps = 17/216 (7%)
Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           ++I++ V+  P ++ L   ++D + +++++E   GGE+F  +    R+ E  A     QI
Sbjct: 113 KRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 171
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDY 210
                 LH  ++++RDLKPEN L     +   +++ DFG +  V+G T     L G+ +Y
Sbjct: 172 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT---WXLCGTPEY 225
Query: 211 VSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKN 270
           ++PE +L        D W+LGV++Y + +GYPPF A    Q  + I++G+  F      +
Sbjct: 226 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----H 281
Query: 271 ISSSAKQLISSLLTVDPNRR-----PSAQELLNHPW 301
            SS  K L+ +LL VD  +R         ++ NH W
Sbjct: 282 FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 317

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score =  104 bits (259), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 113/216 (52%), Gaps = 17/216 (7%)
Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           ++I++ V+  P ++ L   ++D + +++++E   GGE+F  +    R+ E  A     QI
Sbjct: 92  KRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDY 210
                 LH  ++++RDLKPEN L     +   +++ DFG +  V+G T     L G+ +Y
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT---WXLCGTPEY 204
Query: 211 VSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKN 270
           ++PE +L        D W+LGV++Y + +GYPPF A    Q  + I++G+  F      +
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----H 260
Query: 271 ISSSAKQLISSLLTVDPNRR-----PSAQELLNHPW 301
            SS  K L+ +LL VD  +R         ++ NH W
Sbjct: 261 FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score =  104 bits (259), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 113/216 (52%), Gaps = 17/216 (7%)
Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           ++I++ V+  P ++ L   ++D + +++++E   GGE+F  +    R+ E  A     QI
Sbjct: 93  KRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDY 210
                 LH  ++++RDLKPEN L     +   +++ DFG +  V+G T     L G+ +Y
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT---WXLCGTPEY 205
Query: 211 VSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKN 270
           ++PE +L        D W+LGV++Y + +GYPPF A    Q  + I++G+  F      +
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----H 261
Query: 271 ISSSAKQLISSLLTVDPNRR-----PSAQELLNHPW 301
            SS  K L+ +LL VD  +R         ++ NH W
Sbjct: 262 FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 297

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score =  104 bits (259), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 112/216 (51%), Gaps = 17/216 (7%)
Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           ++I++ V+  P +  L   ++D + +++++E   GGE+F  +    R+ E  A     QI
Sbjct: 93  KRILQAVN-FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQI 151
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDY 210
                 LH  ++++RDLKPEN +     +   +K+ DFG +  V+G T     L G+ +Y
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLMI---DQQGYIKVTDFGFAKRVKGRT---WXLCGTPEY 205
Query: 211 VSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKN 270
           ++PE +L        D W+LGV++Y + +GYPPF A    Q  + I++G+  F      +
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----H 261
Query: 271 ISSSAKQLISSLLTVDPNRR-----PSAQELLNHPW 301
            SS  K L+ +LL VD  +R         ++ NH W
Sbjct: 262 FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 297

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score =  104 bits (259), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 113/216 (52%), Gaps = 17/216 (7%)
Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           ++I++ V+  P ++ L   ++D + +++++E   GGE+F  +    R+ E  A     QI
Sbjct: 93  KRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDY 210
                 LH  ++++RDLKPEN L     +   +++ DFG +  V+G T     L G+ +Y
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT---WXLCGTPEY 205
Query: 211 VSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKN 270
           ++PE +L        D W+LGV++Y + +GYPPF A    Q  + I++G+  F      +
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----H 261
Query: 271 ISSSAKQLISSLLTVDPNRR-----PSAQELLNHPW 301
            SS  K L+ +LL VD  +R         ++ NH W
Sbjct: 262 FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 297

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score =  104 bits (259), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 113/216 (52%), Gaps = 17/216 (7%)
Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           ++I++ V+  P ++ L   ++D + +++++E   GGE+F  +    R+ E  A     QI
Sbjct: 85  KRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 143
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDY 210
                 LH  ++++RDLKPEN L     +   +++ DFG +  V+G T     L G+ +Y
Sbjct: 144 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT---WXLCGTPEY 197
Query: 211 VSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKN 270
           ++PE +L        D W+LGV++Y + +GYPPF A    Q  + I++G+  F      +
Sbjct: 198 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----H 253
Query: 271 ISSSAKQLISSLLTVDPNRR-----PSAQELLNHPW 301
            SS  K L+ +LL VD  +R         ++ NH W
Sbjct: 254 FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 289

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score =  103 bits (258), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 113/216 (52%), Gaps = 17/216 (7%)
Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           ++I++ V+  P ++ L   ++D + +++++E   GGE+F  +    R+ E  A     QI
Sbjct: 93  KRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDY 210
                 LH  ++++RDLKPEN L     +   +++ DFG +  V+G T     L G+ +Y
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT---WXLCGTPEY 205
Query: 211 VSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKN 270
           ++PE +L        D W+LGV++Y + +GYPPF A    Q  + I++G+  F      +
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----H 261
Query: 271 ISSSAKQLISSLLTVDPNRR-----PSAQELLNHPW 301
            SS  K L+ +LL VD  +R         ++ NH W
Sbjct: 262 FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 297

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score =  103 bits (258), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 113/216 (52%), Gaps = 17/216 (7%)
Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           ++I++ V+  P ++ L   ++D + +++++E   GG++F  +    R+ E  A     QI
Sbjct: 92  KRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQI 150
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDY 210
                 LH  ++++RDLKPEN L     +   +K+ DFG +  V+G T     L G+ +Y
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIKVADFGFAKRVKGRT---WXLCGTPEY 204
Query: 211 VSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKN 270
           ++PE +L        D W+LGV++Y + +GYPPF A    Q  + I++G+  F      +
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----H 260
Query: 271 ISSSAKQLISSLLTVDPNRR-----PSAQELLNHPW 301
            SS  K L+ +LL VD  +R         ++ NH W
Sbjct: 261 FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score =  103 bits (258), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 112/216 (51%), Gaps = 17/216 (7%)
Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           ++I++ V+  P +  L   ++D + +++++E   GGE+F  +    R+ E  A     QI
Sbjct: 93  KRILQAVN-FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDY 210
                 LH  ++++RDLKPEN +     +   +K+ DFG +  V+G T     L G+ +Y
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLMI---DQQGYIKVTDFGFAKRVKGRT---WXLCGTPEY 205
Query: 211 VSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKN 270
           ++PE +L        D W+LGV++Y + +GYPPF A    Q  + I++G+  F      +
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----H 261
Query: 271 ISSSAKQLISSLLTVDPNRR-----PSAQELLNHPW 301
            SS  K L+ +LL VD  +R         ++ NH W
Sbjct: 262 FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 297

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score =  103 bits (258), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 113/216 (52%), Gaps = 17/216 (7%)
Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           ++I++ V+  P ++ L   ++D + +++++E   GG++F  +    R+ E  A     QI
Sbjct: 92  KRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQI 150
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDY 210
                 LH  ++++RDLKPEN L     +   +K+ DFG +  V+G T     L G+ +Y
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIKVADFGFAKRVKGRT---WXLCGTPEY 204
Query: 211 VSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKN 270
           ++PE +L        D W+LGV++Y + +GYPPF A    Q  + I++G+  F      +
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----H 260
Query: 271 ISSSAKQLISSLLTVDPNRR-----PSAQELLNHPW 301
            SS  K L+ +LL VD  +R         ++ NH W
Sbjct: 261 FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score =  103 bits (257), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 112/216 (51%), Gaps = 17/216 (7%)
Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           ++I++ V+  P +  L   ++D + +++++E   GGE+F  +    R+ E  A     QI
Sbjct: 93  KRILQAVN-FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDY 210
                 LH  ++++RDLKPEN +     +   +K+ DFG +  V+G T     L G+ +Y
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLMI---DQQGYIKVTDFGFAKRVKGRT---WXLCGTPEY 205
Query: 211 VSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKN 270
           ++PE +L        D W+LGV++Y + +GYPPF A    Q  + I++G+  F      +
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----H 261
Query: 271 ISSSAKQLISSLLTVDPNRR-----PSAQELLNHPW 301
            SS  K L+ +LL VD  +R         ++ NH W
Sbjct: 262 FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 297

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score =  103 bits (257), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 113/216 (52%), Gaps = 17/216 (7%)
Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           ++I++ V+  P ++ L   ++D + +++++E   GGE+F  +    R+ E  A     QI
Sbjct: 92  KRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDY 210
                 LH  ++++RDLKPEN +     +   +++ DFG +  V+G T     L G+ +Y
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLMI---DQQGYIQVTDFGFAKRVKGRT---WXLCGTPEY 204
Query: 211 VSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKN 270
           ++PE +L        D W+LGV++Y + +GYPPF A    Q  + I++G+  F      +
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----H 260
Query: 271 ISSSAKQLISSLLTVDPNRR-----PSAQELLNHPW 301
            SS  K L+ +LL VD  +R         ++ NH W
Sbjct: 261 FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score =  103 bits (256), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 63/216 (29%), Positives = 114/216 (52%), Gaps = 17/216 (7%)
Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           ++I++ V+  P ++ L   ++D + +++++E  +GGE+F  +    R+ E  A     QI
Sbjct: 92  KRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDY 210
                 LH  ++++RDLKPEN +     +   +++ DFG +  V+G T     L G+ +Y
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLII---DQQGYIQVTDFGFAKRVKGRT---WXLCGTPEY 204
Query: 211 VSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKN 270
           ++PE ++        D W+LGV++Y + +GYPPF A    Q  + I++G+  F      +
Sbjct: 205 LAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----H 260
Query: 271 ISSSAKQLISSLLTVDPNRR-----PSAQELLNHPW 301
            SS  K L+ +LL VD  +R         ++ NH W
Sbjct: 261 FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score =  103 bits (256), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 113/216 (52%), Gaps = 17/216 (7%)
Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           ++I++ V+  P ++ L   ++D + +++++E  +GGE+F  +    R+ E  A     QI
Sbjct: 92  KRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDY 210
                 LH  ++++RDLKPEN L     +   +++ DFG +  V+G T     L G+ +Y
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT---WXLCGTPEY 204
Query: 211 VSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKN 270
           ++P  +L        D W+LGV++Y + +GYPPF A    Q  + I++G+  F      +
Sbjct: 205 LAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----H 260
Query: 271 ISSSAKQLISSLLTVDPNRR-----PSAQELLNHPW 301
            SS  K L+ +LL VD  +R         ++ NH W
Sbjct: 261 FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score =  102 bits (254), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HP  + LY  ++D   ++  L     G L   I     + E        +I   L  LH 
Sbjct: 91  HPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALL 217
             I+HRDLKPEN L LN  ED  ++I DFG + V   E          G+  YVSPE L 
Sbjct: 151 KGIIHRDLKPENIL-LN--EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 207
Query: 218 QDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQ 277
           +   +  SD+W+LG I+Y L++G PPF A +     Q I+  E+ F E+ +      A+ 
Sbjct: 208 EKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PKARD 263
Query: 278 LISSLLTVDPNRRPSAQEL 296
           L+  LL +D  +R   +E+
Sbjct: 264 LVEKLLVLDATKRLGCEEM 282

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score =  102 bits (254), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 67/203 (33%), Positives = 112/203 (55%), Gaps = 11/203 (5%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HP++I LYDV      + +++E  +GGELFD IV ++R  E       +QI   +   H+
Sbjct: 68  HPHIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHR 126
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDR 220
             IVHRDLKPEN L L+D  +  +KI DFGLS++    + +    GS +Y +PE ++  +
Sbjct: 127 HKIVHRDLKPEN-LLLDDNLN--VKIADFGLSNIMTDGNFLKTSCGSPNYAAPE-VINGK 182
Query: 221 ITS--KSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQL 278
           + +  + D+WS G++LY++L G  PF  +      + + +  +   +     +S  A+ L
Sbjct: 183 LYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPD----FLSPGAQSL 238
Query: 279 ISSLLTVDPNRRPSAQELLNHPW 301
           I  ++  DP +R + QE+   PW
Sbjct: 239 IRRMIVADPMQRITIQEIRRDPW 261

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score =  102 bits (253), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 108/200 (54%), Gaps = 9/200 (4%)
Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           R I+ +V+ HP V+ L+  ++ +  ++LIL+   GG+LF R+  +  + E      + ++
Sbjct: 81  RDILADVN-HPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAEL 139
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDY 210
           A GL  LH   I++RDLKPEN L     E+  +K+ DFGLS     +        G+++Y
Sbjct: 140 ALGLDHLHSLGIIYRDLKPENILL---DEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEY 196
Query: 211 VSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKN 270
           ++PE + +   +  +D WS GV+++ +L+G  PF  +  ++   +I+  +    +     
Sbjct: 197 MAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQ----F 252
Query: 271 ISSSAKQLISSLLTVDPNRR 290
           +S+ A+ L+ +L   +P  R
Sbjct: 253 LSTEAQSLLRALFKRNPANR 272

>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With Ly333531 Length = 312

Iteration: 1
 Score =  102 bits (253), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 141/306 (46%), Gaps = 48/306 (15%)
Query: 2   GQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXX 61
           G+E   L  +Y+V  +LG GGF  V  GI+ +  +   VAIK + +              
Sbjct: 28  GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVS--DNLPVAIKHVEK-------------- 71
Query: 62  XXXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLIL 121
                  G  P   +V +       E+++++K+    S    VI L D +E  +   LIL
Sbjct: 72  -DRISDWGELPNGTRVPM-------EVVLLKKVSSGFS---GVIRLLDWFERPDSFVLIL 120
Query: 122 ELCSG-GELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRE 180
           E      +LFD I  +    E  A +   Q+ E +   H   ++HRD+K EN L   D  
Sbjct: 121 ERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI--DLN 178
Query: 181 DSPLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKS-DMWSLGVILYI 236
              LK++DFG  ++     YTD      G+  Y  PE +   R   +S  +WSLG++LY 
Sbjct: 179 RGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD 234
Query: 237 LLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
           ++ G  PF      +  + I+ G+  F ++    +SS  + LI   L + P+ RP+ +E+
Sbjct: 235 MVCGDIPF------EHDEEIIGGQVFFRQR----VSSECQHLIRWCLALRPSDRPTFEEI 284
Query: 297 LNHPWV 302
            NHPW+
Sbjct: 285 QNHPWM 290

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score =  102 bits (253), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 95/199 (47%), Gaps = 10/199 (5%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HP  + LY  ++D   ++  L     GEL   I     + E        +I   L  LH 
Sbjct: 91  HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALL 217
             I+HRDLKPEN L LN  ED  ++I DFG + V   E          G+  YVSPE L 
Sbjct: 151 KGIIHRDLKPENIL-LN--EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 218 QDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQ 277
           +      SD+W+LG I+Y L++G PPF A +       I+  E+ F E+ +      A+ 
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFF----PKARD 263
Query: 278 LISSLLTVDPNRRPSAQEL 296
           L+  LL +D  +R   +E+
Sbjct: 264 LVEKLLVLDATKRLGCEEM 282

>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Pyrrolo[2,3- A]carbazole Ligand Length = 313

Iteration: 1
 Score =  102 bits (253), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 141/306 (46%), Gaps = 48/306 (15%)
Query: 2   GQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXX 61
           G+E   L  +Y+V  +LG GGF  V  GI+ +  +   VAIK + +              
Sbjct: 29  GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVS--DNLPVAIKHVEK-------------- 72
Query: 62  XXXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLIL 121
                  G  P   +V +       E+++++K+    S    VI L D +E  +   LIL
Sbjct: 73  -DRISDWGELPNGTRVPM-------EVVLLKKVSSGFS---GVIRLLDWFERPDSFVLIL 121
Query: 122 ELCSG-GELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRE 180
           E      +LFD I  +    E  A +   Q+ E +   H   ++HRD+K EN L   D  
Sbjct: 122 ERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI--DLN 179
Query: 181 DSPLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKS-DMWSLGVILYI 236
              LK++DFG  ++     YTD      G+  Y  PE +   R   +S  +WSLG++LY 
Sbjct: 180 RGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD 235
Query: 237 LLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
           ++ G  PF      +  + I+ G+  F ++    +SS  + LI   L + P+ RP+ +E+
Sbjct: 236 MVCGDIPF------EHDEEIIGGQVFFRQR----VSSECQHLIRWCLALRPSDRPTFEEI 285
Query: 297 LNHPWV 302
            NHPW+
Sbjct: 286 QNHPWM 291

>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Beta Carboline Ligand I Length = 314

Iteration: 1
 Score =  102 bits (253), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 141/306 (46%), Gaps = 48/306 (15%)
Query: 2   GQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXX 61
           G+E   L  +Y+V  +LG GGF  V  GI+ +  +   VAIK + +              
Sbjct: 29  GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVS--DNLPVAIKHVEK-------------- 72
Query: 62  XXXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLIL 121
                  G  P   +V +       E+++++K+    S    VI L D +E  +   LIL
Sbjct: 73  -DRISDWGELPNGTRVPM-------EVVLLKKVSSGFS---GVIRLLDWFERPDSFVLIL 121
Query: 122 ELCSG-GELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRE 180
           E      +LFD I  +    E  A +   Q+ E +   H   ++HRD+K EN L   D  
Sbjct: 122 ERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI--DLN 179
Query: 181 DSPLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKS-DMWSLGVILYI 236
              LK++DFG  ++     YTD      G+  Y  PE +   R   +S  +WSLG++LY 
Sbjct: 180 RGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD 235
Query: 237 LLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
           ++ G  PF      +  + I+ G+  F ++    +SS  + LI   L + P+ RP+ +E+
Sbjct: 236 MVCGDIPF------EHDEEIIGGQVFFRQR----VSSECQHLIRWCLALRPSDRPTFEEI 285
Query: 297 LNHPWV 302
            NHPW+
Sbjct: 286 QNHPWM 291

>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its Consensus Peptide Pimtide Length = 313

Iteration: 1
 Score =  102 bits (253), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 141/306 (46%), Gaps = 48/306 (15%)
Query: 2   GQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXX 61
           G+E   L  +Y+V  +LG GGF  V  GI+ +  +   VAIK + +              
Sbjct: 28  GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVS--DNLPVAIKHVEK-------------- 71
Query: 62  XXXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLIL 121
                  G  P   +V +       E+++++K+    S    VI L D +E  +   LIL
Sbjct: 72  -DRISDWGELPNGTRVPM-------EVVLLKKVSSGFS---GVIRLLDWFERPDSFVLIL 120
Query: 122 ELCSG-GELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRE 180
           E      +LFD I  +    E  A +   Q+ E +   H   ++HRD+K EN L   D  
Sbjct: 121 ERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI--DLN 178
Query: 181 DSPLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKS-DMWSLGVILYI 236
              LK++DFG  ++     YTD      G+  Y  PE +   R   +S  +WSLG++LY 
Sbjct: 179 RGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD 234
Query: 237 LLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
           ++ G  PF      +  + I+ G+  F ++    +SS  + LI   L + P+ RP+ +E+
Sbjct: 235 MVCGDIPF------EHDEEIIGGQVFFRQR----VSSECQHLIRWCLALRPSDRPTFEEI 284
Query: 297 LNHPWV 302
            NHPW+
Sbjct: 285 QNHPWM 290

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score =  101 bits (252), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 70/228 (30%), Positives = 114/228 (50%), Gaps = 15/228 (6%)
Query: 80  SDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRI--VAQE 137
            +A+  NE  ++ K+         V+ L   YE ++ + L+L L +GG+L   I  + Q 
Sbjct: 227 GEAMALNEKQILEKVNSRF-----VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQA 281
Query: 138 RYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGY 197
            + E  A     +I  GL  LH+  IV+RDLKPEN + L+D     ++I D GL+     
Sbjct: 282 GFPEARAVFYAAEICCGLEDLHRERIVYRDLKPEN-ILLDDH--GHIRISDLGLAVHVPE 338
Query: 198 TDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIM 257
              + G  G++ Y++PE +  +R T   D W+LG +LY +++G  PF  +  + K++ + 
Sbjct: 339 GQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVE 398
Query: 258 AGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR-----PSAQELLNHP 300
                  E+  +  S  A+ L S LL  DP  R      SA+E+  HP
Sbjct: 399 RLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHP 446

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score =  101 bits (252), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 95/199 (47%), Gaps = 10/199 (5%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HP  + LY  ++D   ++  L     GEL   I     + E        +I   L  LH 
Sbjct: 91  HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALL 217
             I+HRDLKPEN L LN  ED  ++I DFG + V   E          G+  YVSPE L 
Sbjct: 151 KGIIHRDLKPENIL-LN--EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 218 QDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQ 277
           +      SD+W+LG I+Y L++G PPF A +       I+  E+ F E+ +      A+ 
Sbjct: 208 EKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFF----PKARD 263
Query: 278 LISSLLTVDPNRRPSAQEL 296
           L+  LL +D  +R   +E+
Sbjct: 264 LVEKLLVLDATKRLGCEEM 282

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score =  101 bits (252), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 113/216 (52%), Gaps = 17/216 (7%)
Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           ++I++ V+  P ++ L   ++D + +++++E  +GGE+F  +    R+ E  A     QI
Sbjct: 92  KRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDY 210
                 LH  ++++RDLKPEN L     +   +++ DFG +  V+G T     L G+ + 
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT---WXLCGTPEA 204
Query: 211 VSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKN 270
           ++PE +L        D W+LGV++Y + +GYPPF A    Q  + I++G+  F      +
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----H 260
Query: 271 ISSSAKQLISSLLTVDPNRR-----PSAQELLNHPW 301
            SS  K L+ +LL VD  +R         ++ NH W
Sbjct: 261 FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score =  101 bits (251), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 70/228 (30%), Positives = 114/228 (50%), Gaps = 15/228 (6%)
Query: 80  SDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRI--VAQE 137
            +A+  NE  ++ K+         V+ L   YE ++ + L+L L +GG+L   I  + Q 
Sbjct: 227 GEAMALNEKQILEKVNSRF-----VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQA 281
Query: 138 RYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGY 197
            + E  A     +I  GL  LH+  IV+RDLKPEN + L+D     ++I D GL+     
Sbjct: 282 GFPEARAVFYAAEICCGLEDLHRERIVYRDLKPEN-ILLDDH--GHIRISDLGLAVHVPE 338
Query: 198 TDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIM 257
              + G  G++ Y++PE +  +R T   D W+LG +LY +++G  PF  +  + K++ + 
Sbjct: 339 GQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVE 398
Query: 258 AGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR-----PSAQELLNHP 300
                  E+  +  S  A+ L S LL  DP  R      SA+E+  HP
Sbjct: 399 RLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHP 446

>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score =  101 bits (251), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 88/304 (28%), Positives = 141/304 (46%), Gaps = 44/304 (14%)
Query: 2   GQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXX 61
           G+E   L  +Y+V  +LG GGF  V  GI+ +  +   VAIK + +              
Sbjct: 43  GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVS--DNLPVAIKHVEK-------------- 86
Query: 62  XXXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLIL 121
                  G  P   +V +       E+++++K+    S    VI L D +E  +   LIL
Sbjct: 87  -DRISDWGELPNGTRVPM-------EVVLLKKVSSGFS---GVIRLLDWFERPDSFVLIL 135
Query: 122 ELCSG-GELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRE 180
           E      +LFD I  +    E  A +   Q+ E +   H   ++HRD+K EN L   D  
Sbjct: 136 ERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI--DLN 193
Query: 181 DSPLKIMDFGLSSVEGYTDPVVGLF-GSIDYVSPEALLQDRITSKS-DMWSLGVILYILL 238
              LK++DFG  ++    D V   F G+  Y  PE +   R   +S  +WSLG++LY ++
Sbjct: 194 RGELKLIDFGSGAL--LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 251
Query: 239 SGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN 298
            G  PF      +  + I+ G+  F ++    +SS  + LI   L + P+ RP+ +E+ N
Sbjct: 252 CGDIPF------EHDEEIIRGQVFFRQR----VSSECQHLIRWCLALRPSDRPTFEEIQN 301
Query: 299 HPWV 302
           HPW+
Sbjct: 302 HPWM 305

>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain Length = 313

Iteration: 1
 Score =  101 bits (251), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 141/306 (46%), Gaps = 48/306 (15%)
Query: 2   GQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXX 61
           G+E   L  +Y+V  +LG GGF  V  GI+ +  +   VAIK + +              
Sbjct: 28  GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVS--DNLPVAIKHVEK-------------- 71
Query: 62  XXXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLIL 121
                  G  P   +V +       E+++++K+    S    VI L D +E  +   LIL
Sbjct: 72  -DRISDWGELPNGTRVPM-------EVVLLKKVSSGFS---GVIRLLDWFERPDSFVLIL 120
Query: 122 ELCSG-GELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRE 180
           E      +LFD I  +    E  A +   Q+ E +   H   ++HRD+K EN L   D  
Sbjct: 121 ERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI--DLN 178
Query: 181 DSPLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKS-DMWSLGVILYI 236
              LK++DFG  ++     YTD      G+  Y  PE +   R   +S  +WSLG++LY 
Sbjct: 179 RGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD 234
Query: 237 LLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
           ++ G  PF      +  + I+ G+  F ++    +SS  + LI   L + P+ RP+ +E+
Sbjct: 235 MVCGDIPF------EHDEEIIRGQVFFRQR----VSSECQHLIRWCLALRPSDRPTFEEI 284
Query: 297 LNHPWV 302
            NHPW+
Sbjct: 285 QNHPWM 290

>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution Length = 300

Iteration: 1
 Score =  101 bits (251), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 143/306 (46%), Gaps = 48/306 (15%)
Query: 2   GQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXX 61
           G+E   L  +Y+V  +LG GGF  V  GI+ +  +   VAIK + +              
Sbjct: 15  GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVS--DNLPVAIKHVEK-------------- 58
Query: 62  XXXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLIL 121
                  G  P   +V +       E+++++K+    S    VI L D +E  +   LIL
Sbjct: 59  -DRISDWGELPNGTRVPM-------EVVLLKKVSSGFS---GVIRLLDWFERPDSFVLIL 107
Query: 122 ELCSG-GELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRE 180
           E      +LFD I  +    E  A +   Q+ E +   H   ++HRD+K EN L   +R 
Sbjct: 108 ERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG 167
Query: 181 DSPLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKS-DMWSLGVILYI 236
           +  LK++DFG  ++     YTD      G+  Y  PE +   R   +S  +WSLG++LY 
Sbjct: 168 E--LKLIDFGSGALLKDTVYTD----FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD 221
Query: 237 LLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
           ++ G  PF      +  + I+ G+  F ++    +SS  + LI   L + P+ RP+ +E+
Sbjct: 222 MVCGDIPF------EHDEEIIRGQVFFRQR----VSSECQHLIRWCLALRPSDRPTFEEI 271
Query: 297 LNHPWV 302
            NHPW+
Sbjct: 272 QNHPWM 277

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score =  100 bits (250), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 94/199 (47%), Gaps = 10/199 (5%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HP  + LY  ++D   ++  L     GEL   I     + E        +I   L  LH 
Sbjct: 94  HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 153
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALL 217
             I+HRDLKPEN L LN  ED  ++I DFG + V   E          G+  YVSPE L 
Sbjct: 154 KGIIHRDLKPENIL-LN--EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 210
Query: 218 QDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQ 277
           +      SD+W+LG I+Y L++G PPF A +     Q I+  E+ F    +      A+ 
Sbjct: 211 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPAAFF----PKARD 266
Query: 278 LISSLLTVDPNRRPSAQEL 296
           L+  LL +D  +R   +E+
Sbjct: 267 LVEKLLVLDATKRLGCEEM 285

>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score =  100 bits (250), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 143/306 (46%), Gaps = 48/306 (15%)
Query: 2   GQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXX 61
           G+E   L  +Y+V  +LG GGF  V  GI+ +  +   VAIK + +              
Sbjct: 16  GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVS--DNLPVAIKHVEK-------------- 59
Query: 62  XXXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLIL 121
                  G  P   +V +       E+++++K+    S    VI L D +E  +   LIL
Sbjct: 60  -DRISDWGELPNGTRVPM-------EVVLLKKVSSGFS---GVIRLLDWFERPDSFVLIL 108
Query: 122 ELCSG-GELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRE 180
           E      +LFD I  +    E  A +   Q+ E +   H   ++HRD+K EN L   +R 
Sbjct: 109 ERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG 168
Query: 181 DSPLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKS-DMWSLGVILYI 236
           +  LK++DFG  ++     YTD      G+  Y  PE +   R   +S  +WSLG++LY 
Sbjct: 169 E--LKLIDFGSGALLKDTVYTD----FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD 222
Query: 237 LLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
           ++ G  PF      +  + I+ G+  F ++    +SS  + LI   L + P+ RP+ +E+
Sbjct: 223 MVCGDIPF------EHDEEIIRGQVFFRQR----VSSECQHLIRWCLALRPSDRPTFEEI 272
Query: 297 LNHPWV 302
            NHPW+
Sbjct: 273 QNHPWM 278

>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of P27kip1 Carboxy-Terminal Peptide Length = 320

Iteration: 1
 Score =  100 bits (250), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 143/306 (46%), Gaps = 48/306 (15%)
Query: 2   GQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXX 61
           G+E   L  +Y+V  +LG GGF  V  GI+ +  +   VAIK + +              
Sbjct: 35  GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVS--DNLPVAIKHVEK-------------- 78
Query: 62  XXXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLIL 121
                  G  P   +V +       E+++++K+    S    VI L D +E  +   LIL
Sbjct: 79  -DRISDWGELPNGTRVPM-------EVVLLKKVSSGFS---GVIRLLDWFERPDSFVLIL 127
Query: 122 ELCSG-GELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRE 180
           E      +LFD I  +    E  A +   Q+ E +   H   ++HRD+K EN L   +R 
Sbjct: 128 ERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG 187
Query: 181 DSPLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKS-DMWSLGVILYI 236
           +  LK++DFG  ++     YTD      G+  Y  PE +   R   +S  +WSLG++LY 
Sbjct: 188 E--LKLIDFGSGALLKDTVYTD----FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD 241
Query: 237 LLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
           ++ G  PF      +  + I+ G+  F ++    +SS  + LI   L + P+ RP+ +E+
Sbjct: 242 MVCGDIPF------EHDEEIIRGQVFFRQR----VSSECQHLIRWCLALRPSDRPTFEEI 291
Query: 297 LNHPWV 302
            NHPW+
Sbjct: 292 QNHPWM 297

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score =  100 bits (249), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 103/195 (52%), Gaps = 10/195 (5%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HP ++ L+  ++ +  ++LIL+   GG+LF R+  +  + E      + ++A  L  LH 
Sbjct: 85  HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHS 144
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLS--SVEGYTDPVVGLFGSIDYVSPEALLQ 218
             I++RDLKPEN L     E+  +K+ DFGLS  S++ +        G+++Y++PE + +
Sbjct: 145 LGIIYRDLKPENILL---DEEGHIKLTDFGLSKESID-HEKKAYSFCGTVEYMAPEVVNR 200
Query: 219 DRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQL 278
              T  +D WS GV+++ +L+G  PF  +  ++   MI+  +    +     +S  A+ L
Sbjct: 201 RGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ----FLSPEAQSL 256
Query: 279 ISSLLTVDPNRRPSA 293
           +  L   +P  R  A
Sbjct: 257 LRMLFKRNPANRLGA 271

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score =  100 bits (249), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 103/195 (52%), Gaps = 10/195 (5%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HP ++ L+  ++ +  ++LIL+   GG+LF R+  +  + E      + ++A  L  LH 
Sbjct: 86  HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHS 145
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLS--SVEGYTDPVVGLFGSIDYVSPEALLQ 218
             I++RDLKPEN L     E+  +K+ DFGLS  S++ +        G+++Y++PE + +
Sbjct: 146 LGIIYRDLKPENILL---DEEGHIKLTDFGLSKESID-HEKKAYSFCGTVEYMAPEVVNR 201
Query: 219 DRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQL 278
              T  +D WS GV+++ +L+G  PF  +  ++   MI+  +    +     +S  A+ L
Sbjct: 202 RGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ----FLSPEAQSL 257
Query: 279 ISSLLTVDPNRRPSA 293
           +  L   +P  R  A
Sbjct: 258 LRMLFKRNPANRLGA 272

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score =  100 bits (249), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 100/194 (51%), Gaps = 8/194 (4%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HP ++ L+  ++ +  ++LIL+   GG+LF R+  +  + E      + ++A  L  LH 
Sbjct: 85  HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHS 144
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVE-GYTDPVVGLFGSIDYVSPEALLQD 219
             I++RDLKPEN L     E+  +K+ DFGLS     +        G+++Y++PE + + 
Sbjct: 145 LGIIYRDLKPENILL---DEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRR 201
Query: 220 RITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLI 279
             T  +D WS GV+++ +L+G  PF  +  ++   MI+  +    +     +S  A+ L+
Sbjct: 202 GHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ----FLSPEAQSLL 257
Query: 280 SSLLTVDPNRRPSA 293
             L   +P  R  A
Sbjct: 258 RMLFKRNPANRLGA 271

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score =  100 bits (249), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 106/210 (50%), Gaps = 8/210 (3%)
Query: 87  EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAA 146
            I+  R ++     HP ++ L+  ++  + ++ +L+  +GGELF  +  +  ++E  A  
Sbjct: 84  HIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARF 143
Query: 147 VIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF- 205
              +IA  L  LH  NIV+RDLKPEN L   D +   + + DFGL       +     F 
Sbjct: 144 YAAEIASALGYLHSLNIVYRDLKPENILL--DSQGH-IVLTDFGLCKENIEHNSTTSTFC 200
Query: 206 GSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYE 265
           G+ +Y++PE L +       D W LG +LY +L G PPF +++  +    I+        
Sbjct: 201 GTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPL---- 256
Query: 266 QTWKNISSSAKQLISSLLTVDPNRRPSAQE 295
           Q   NI++SA+ L+  LL  D  +R  A++
Sbjct: 257 QLKPNITNSARHLLEGLLQKDRTKRLGAKD 286

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score =  100 bits (249), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 124/233 (53%), Gaps = 23/233 (9%)
Query: 83  LLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNG--VHLILELCSGGELFDRIVA---QE 137
           +L +E+ ++R++      HPN++  YD   D+    +++++E C GG+L   I     + 
Sbjct: 51  MLVSEVNLLREL-----KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKER 105
Query: 138 RYM-EVGAAAVIRQIAEGLAALHQAN-----IVHRDLKPENCLFLNDREDSPLKIMDFGL 191
           +Y+ E     V+ Q+   L   H+ +     ++HRDLKP N +FL+ +++  +K+ DFGL
Sbjct: 106 QYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPAN-VFLDGKQN--VKLGDFGL 162
Query: 192 SSVEGYTDPVVGLF-GSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNR 250
           + +  +       F G+  Y+SPE + +     KSD+WSLG +LY L +  PPF A S +
Sbjct: 163 ARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK 222
Query: 251 QKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVI 303
           +    I  G+F      +   S    ++I+ +L +    RPS +E+L +P ++
Sbjct: 223 ELAGKIREGKFRRIPYRY---SDELNEIITRMLNLKDYHRPSVEEILENPLIL 272

>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Naphtho-Difuran Ligand Length = 313

Iteration: 1
 Score =  100 bits (249), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/306 (28%), Positives = 140/306 (45%), Gaps = 48/306 (15%)
Query: 2   GQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXX 61
           G+E   L  +Y+V  +LG GGF  V  GI+ +  +   VAIK + +              
Sbjct: 29  GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVS--DNLPVAIKHVEK-------------- 72
Query: 62  XXXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLIL 121
                  G  P   +V +       E+++++K+    S    VI L D +E  +   LIL
Sbjct: 73  -DRISDWGELPNGTRVPM-------EVVLLKKVSSGFS---GVIRLLDWFERPDSFVLIL 121
Query: 122 ELCSG-GELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRE 180
           E      +LFD I  +    E  A +   Q+ E +   H   ++HRD+K EN L   D  
Sbjct: 122 ERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI--DLN 179
Query: 181 DSPLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKS-DMWSLGVILYI 236
              LK++DFG  ++     YTD      G+  Y  PE +   R   +S  +WSLG++LY 
Sbjct: 180 RGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD 235
Query: 237 LLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
           ++ G  PF      +  + I+ G+  F ++    +S   + LI   L + P+ RP+ +E+
Sbjct: 236 MVCGDIPF------EHDEEIIGGQVFFRQR----VSXECQHLIRWCLALRPSDRPTFEEI 285
Query: 297 LNHPWV 302
            NHPW+
Sbjct: 286 QNHPWM 291

>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261 Length = 313

Iteration: 1
 Score =  100 bits (248), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/306 (28%), Positives = 140/306 (45%), Gaps = 48/306 (15%)
Query: 2   GQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXX 61
           G+E   L  +Y+V  +LG GGF  V  GI+ +  +   VAIK + +              
Sbjct: 28  GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVS--DNLPVAIKHVEK-------------- 71
Query: 62  XXXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLIL 121
                  G  P   +V +       E+++++K+    S    VI L D +E  +   LIL
Sbjct: 72  -DRISDWGELPNGTRVPM-------EVVLLKKVSSGFS---GVIRLLDWFERPDSFVLIL 120
Query: 122 ELCSG-GELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRE 180
           E      +LFD I  +    E  A +   Q+ E +   H   ++HRD+K EN L   D  
Sbjct: 121 ERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI--DLN 178
Query: 181 DSPLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKS-DMWSLGVILYI 236
              LK++DFG  ++     YTD      G+  Y  PE +   R   +S  +WSLG++LY 
Sbjct: 179 RGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD 234
Query: 237 LLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
           ++ G  PF      +  + I+ G+  F ++    +S   + LI   L + P+ RP+ +E+
Sbjct: 235 MVCGDIPF------EHDEEIIGGQVFFRQR----VSXECQHLIRWCLALRPSDRPTFEEI 284
Query: 297 LNHPWV 302
            NHPW+
Sbjct: 285 QNHPWM 290

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score =  100 bits (248), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 125/233 (53%), Gaps = 23/233 (9%)
Query: 83  LLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNG--VHLILELCSGGELFDRIVA---QE 137
           +L +E+ ++R++      HPN++  YD   D+    +++++E C GG+L   I     + 
Sbjct: 51  MLVSEVNLLREL-----KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKER 105
Query: 138 RYM-EVGAAAVIRQIAEGLAALHQAN-----IVHRDLKPENCLFLNDREDSPLKIMDFGL 191
           +Y+ E     V+ Q+   L   H+ +     ++HRDLKP N +FL+ +++  +K+ DFGL
Sbjct: 106 QYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPAN-VFLDGKQN--VKLGDFGL 162
Query: 192 SSVEGYTDPVVGLF-GSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNR 250
           + +  + +     F G+  Y+SPE + +     KSD+WSLG +LY L +  PPF A S +
Sbjct: 163 ARILNHDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK 222
Query: 251 QKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVI 303
           +    I  G+F      +   S    ++I+ +L +    RPS +E+L +P ++
Sbjct: 223 ELAGKIREGKFRRIPYRY---SDELNEIITRMLNLKDYHRPSVEEILENPLIL 272

>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And The Jnk Inhibitor V Length = 314

Iteration: 1
 Score =  100 bits (248), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/306 (28%), Positives = 140/306 (45%), Gaps = 48/306 (15%)
Query: 2   GQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXX 61
           G+E   L  +Y+V  +LG GGF  V  GI+ +  +   VAIK + +              
Sbjct: 29  GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVS--DNLPVAIKHVEK-------------- 72
Query: 62  XXXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLIL 121
                  G  P   +V +       E+++++K+    S    VI L D +E  +   LIL
Sbjct: 73  -DRISDWGELPNGTRVPM-------EVVLLKKVSSGFS---GVIRLLDWFERPDSFVLIL 121
Query: 122 ELCSG-GELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRE 180
           E      +LFD I  +    E  A +   Q+ E +   H   ++HRD+K EN L   D  
Sbjct: 122 ERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI--DLN 179
Query: 181 DSPLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKS-DMWSLGVILYI 236
              LK++DFG  ++     YTD      G+  Y  PE +   R   +S  +WSLG++LY 
Sbjct: 180 RGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD 235
Query: 237 LLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
           ++ G  PF      +  + I+ G+  F ++    +S   + LI   L + P+ RP+ +E+
Sbjct: 236 MVCGDIPF------EHDEEIIGGQVFFRQR----VSXECQHLIRWCLALRPSDRPTFEEI 285
Query: 297 LNHPWV 302
            NHPW+
Sbjct: 286 QNHPWM 291

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score =  100 bits (248), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 124/233 (53%), Gaps = 23/233 (9%)
Query: 83  LLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNG--VHLILELCSGGELFDRIVA---QE 137
           +L +E+ ++R++      HPN++  YD   D+    +++++E C GG+L   I     + 
Sbjct: 51  MLVSEVNLLREL-----KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKER 105
Query: 138 RYM-EVGAAAVIRQIAEGLAALHQAN-----IVHRDLKPENCLFLNDREDSPLKIMDFGL 191
           +Y+ E     V+ Q+   L   H+ +     ++HRDLKP N +FL+ +++  +K+ DFGL
Sbjct: 106 QYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPAN-VFLDGKQN--VKLGDFGL 162
Query: 192 SSVEGYTDPVVGLF-GSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNR 250
           + +  +       F G+  Y+SPE + +     KSD+WSLG +LY L +  PPF A S +
Sbjct: 163 ARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK 222
Query: 251 QKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVI 303
           +    I  G+F      +   S    ++I+ +L +    RPS +E+L +P ++
Sbjct: 223 ELAGKIREGKFRRIPYRY---SDELNEIITRMLNLKDYHRPSVEEILENPLIL 272

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 99.8 bits (247), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 115/222 (51%), Gaps = 11/222 (4%)
Query: 83  LLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEV 142
           LL NE+++MR        H NV+++Y  Y     + +++E   GG L D IV+Q R  E 
Sbjct: 88  LLFNEVVIMRDY-----QHFNVVEMYKSYLVGEELWVLMEFLQGGALTD-IVSQVRLNEE 141
Query: 143 GAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPV- 201
             A V   + + LA LH   ++HRD+K ++ L      D  +K+ DFG  +      P  
Sbjct: 142 QIATVCEAVLQALAYLHAQGVIHRDIKSDSILL---TLDGRVKLSDFGFCAQISKDVPKR 198
Query: 202 VGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEF 261
             L G+  +++PE + +    ++ D+WSLG+++  ++ G PP+ + S  Q  + +     
Sbjct: 199 KXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPP 258
Query: 262 SFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVI 303
              + + K +S   +  +  +L  DP  R +AQELL+HP+++
Sbjct: 259 PKLKNSHK-VSPVLRDFLERMLVRDPQERATAQELLDHPFLL 299

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 99.8 bits (247), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 113/221 (51%), Gaps = 11/221 (4%)
Query: 83  LLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEV 142
           LL NE+++MR        H NV+++Y+ Y   + + +++E   GG L D IV   R  E 
Sbjct: 194 LLFNEVVIMRDYQ-----HENVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEE 247
Query: 143 GAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGL-SSVEGYTDPV 201
             AAV   + + L+ LH   ++HRD+K ++ L  +D     +K+ DFG  + V       
Sbjct: 248 QIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR---VKLSDFGFCAQVSKEVPRR 304
Query: 202 VGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEF 261
             L G+  +++PE + +     + D+WSLG+++  ++ G PP+  +   +  +MI     
Sbjct: 305 KXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIR-DNL 363
Query: 262 SFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
               +    +S S K  +  LL  DP +R +A ELL HP++
Sbjct: 364 PPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 404

>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 99.8 bits (247), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 87/306 (28%), Positives = 140/306 (45%), Gaps = 48/306 (15%)
Query: 2   GQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXX 61
           G+E   L  +Y+V  +LG GGF  V  GI+ +  +   VAIK + +              
Sbjct: 16  GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVS--DNLPVAIKHVEK-------------- 59
Query: 62  XXXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLIL 121
                  G  P   +V +       E+++++K+    S    VI L D +E  +   LIL
Sbjct: 60  -DRISDWGELPNGTRVPM-------EVVLLKKVSSGFS---GVIRLLDWFERPDSFVLIL 108
Query: 122 ELCSG-GELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRE 180
           E      +LFD I  +    E  A +   Q+ E +   H   ++HRD+K EN L   D  
Sbjct: 109 ERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI--DLN 166
Query: 181 DSPLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKS-DMWSLGVILYI 236
              LK++DFG  ++     YTD      G+  Y  PE +   R   +S  +WSLG++LY 
Sbjct: 167 RGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD 222
Query: 237 LLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
           ++ G  PF      +  + I+ G+  F ++    +S   + LI   L + P+ RP+ +E+
Sbjct: 223 MVCGDIPF------EHDEEIIRGQVFFRQR----VSXECQHLIRWCLALRPSDRPTFEEI 272
Query: 297 LNHPWV 302
            NHPW+
Sbjct: 273 QNHPWM 278

>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa Length = 300

Iteration: 1
 Score = 99.8 bits (247), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 87/306 (28%), Positives = 140/306 (45%), Gaps = 48/306 (15%)
Query: 2   GQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXX 61
           G+E   L  +Y+V  +LG GGF  V  GI+ +  +   VAIK + +              
Sbjct: 15  GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVS--DNLPVAIKHVEK-------------- 58
Query: 62  XXXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLIL 121
                  G  P   +V +       E+++++K+    S    VI L D +E  +   LIL
Sbjct: 59  -DRISDWGELPNGTRVPM-------EVVLLKKVSSGFS---GVIRLLDWFERPDSFVLIL 107
Query: 122 ELCSG-GELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRE 180
           E      +LFD I  +    E  A +   Q+ E +   H   ++HRD+K EN L   D  
Sbjct: 108 ERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI--DLN 165
Query: 181 DSPLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKS-DMWSLGVILYI 236
              LK++DFG  ++     YTD      G+  Y  PE +   R   +S  +WSLG++LY 
Sbjct: 166 RGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD 221
Query: 237 LLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
           ++ G  PF      +  + I+ G+  F ++    +S   + LI   L + P+ RP+ +E+
Sbjct: 222 MVCGDIPF------EHDEEIIRGQVFFRQR----VSXECQHLIRWCLALRPSDRPTFEEI 271
Query: 297 LNHPWV 302
            NHPW+
Sbjct: 272 QNHPWM 277

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 99.4 bits (246), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 113/221 (51%), Gaps = 11/221 (4%)
Query: 83  LLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEV 142
           LL NE+++MR        H NV+++Y+ Y   + + +++E   GG L D IV   R  E 
Sbjct: 74  LLFNEVVIMRDYQ-----HENVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEE 127
Query: 143 GAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGL-SSVEGYTDPV 201
             AAV   + + L+ LH   ++HRD+K ++ L  +D     +K+ DFG  + V       
Sbjct: 128 QIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR---VKLSDFGFCAQVSKEVPRR 184
Query: 202 VGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEF 261
             L G+  +++PE + +     + D+WSLG+++  ++ G PP+  +   +  +MI     
Sbjct: 185 KXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI-RDNL 243
Query: 262 SFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
               +    +S S K  +  LL  DP +R +A ELL HP++
Sbjct: 244 PPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 284

>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With 4-(4- Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One Length = 328

Iteration: 1
 Score = 99.4 bits (246), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 87/306 (28%), Positives = 140/306 (45%), Gaps = 48/306 (15%)
Query: 2   GQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXX 61
           G+E   L  +Y+V  +LG GGF  V  GI+ +  +   VAIK + +              
Sbjct: 43  GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVS--DNLPVAIKHVEK-------------- 86
Query: 62  XXXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLIL 121
                  G  P   +V +       E+++++K+    S    VI L D +E  +   LIL
Sbjct: 87  -DRISDWGELPNGTRVPM-------EVVLLKKVSSGFS---GVIRLLDWFERPDSFVLIL 135
Query: 122 ELCSG-GELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRE 180
           E      +LFD I  +    E  A +   Q+ E +   H   ++HRD+K EN L   D  
Sbjct: 136 ERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI--DLN 193
Query: 181 DSPLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKS-DMWSLGVILYI 236
              LK++DFG  ++     YTD      G+  Y  PE +   R   +S  +WSLG++LY 
Sbjct: 194 RGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD 249
Query: 237 LLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
           ++ G  PF      +  + I+ G+  F ++    +S   + LI   L + P+ RP+ +E+
Sbjct: 250 MVCGDIPF------EHDEEIIRGQVFFRQR----VSXECQHLIRWCLALRPSDRPTFEEI 299
Query: 297 LNHPWV 302
            NHPW+
Sbjct: 300 QNHPWM 305

>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With Inhibitor Length = 333

Iteration: 1
 Score = 99.4 bits (246), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 87/306 (28%), Positives = 140/306 (45%), Gaps = 48/306 (15%)
Query: 2   GQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXX 61
           G+E   L  +Y+V  +LG GGF  V  GI+ +  +   VAIK + +              
Sbjct: 48  GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVS--DNLPVAIKHVEK-------------- 91
Query: 62  XXXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLIL 121
                  G  P   +V +       E+++++K+    S    VI L D +E  +   LIL
Sbjct: 92  -DRISDWGELPNGTRVPM-------EVVLLKKVSSGFS---GVIRLLDWFERPDSFVLIL 140
Query: 122 ELCSG-GELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRE 180
           E      +LFD I  +    E  A +   Q+ E +   H   ++HRD+K EN L   D  
Sbjct: 141 ERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI--DLN 198
Query: 181 DSPLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKS-DMWSLGVILYI 236
              LK++DFG  ++     YTD      G+  Y  PE +   R   +S  +WSLG++LY 
Sbjct: 199 RGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD 254
Query: 237 LLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
           ++ G  PF      +  + I+ G+  F ++    +S   + LI   L + P+ RP+ +E+
Sbjct: 255 MVCGDIPF------EHDEEIIRGQVFFRQR----VSXECQHLIRWCLALRPSDRPTFEEI 304
Query: 297 LNHPWV 302
            NHPW+
Sbjct: 305 QNHPWM 310

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 99.0 bits (245), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 113/221 (51%), Gaps = 11/221 (4%)
Query: 83  LLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEV 142
           LL NE+++MR        H NV+++Y+ Y   + + +++E   GG L D IV   R  E 
Sbjct: 63  LLFNEVVIMRDY-----QHENVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEE 116
Query: 143 GAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGL-SSVEGYTDPV 201
             AAV   + + L+ LH   ++HRD+K ++ L  +D     +K+ DFG  + V       
Sbjct: 117 QIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR---VKLSDFGFCAQVSKEVPRR 173
Query: 202 VGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEF 261
             L G+  +++PE + +     + D+WSLG+++  ++ G PP+  +   +  +MI     
Sbjct: 174 KXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI-RDNL 232
Query: 262 SFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
               +    +S S K  +  LL  DP +R +A ELL HP++
Sbjct: 233 PPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 273

>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 99.0 bits (245), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 87/306 (28%), Positives = 139/306 (45%), Gaps = 48/306 (15%)
Query: 2   GQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXX 61
           G+E   L  +Y+V  +LG GGF  V  GI+ +  +   VAIK + +              
Sbjct: 16  GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVS--DNLPVAIKHVEK-------------- 59
Query: 62  XXXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLIL 121
                  G  P   +V +       E+++++K+    S    VI L D +E  +   LIL
Sbjct: 60  -DRISDWGELPNGTRVPM-------EVVLLKKVSSGFS---GVIRLLDWFERPDSFVLIL 108
Query: 122 ELCSG-GELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRE 180
           E      +LFD I  +    E  A +   Q+ E +   H   ++HRD+K EN L   D  
Sbjct: 109 ERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI--DLN 166
Query: 181 DSPLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKS-DMWSLGVILYI 236
              LK++DFG  ++     YTD      G+  Y  PE +   R   +S  +WSLG++LY 
Sbjct: 167 RGELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD 222
Query: 237 LLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
           ++ G  PF      +  + I+ G+  F ++    +S   + LI   L + P  RP+ +E+
Sbjct: 223 MVCGDIPF------EHDEEIIRGQVFFRQR----VSXECQHLIRWCLALRPXDRPTFEEI 272
Query: 297 LNHPWV 302
            NHPW+
Sbjct: 273 QNHPWM 278

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 99.0 bits (245), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 113/221 (51%), Gaps = 11/221 (4%)
Query: 83  LLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEV 142
           LL NE+++MR        H NV+++Y+ Y   + + +++E   GG L D IV   R  E 
Sbjct: 117 LLFNEVVIMRDYQ-----HENVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEE 170
Query: 143 GAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGL-SSVEGYTDPV 201
             AAV   + + L+ LH   ++HRD+K ++ L  +D     +K+ DFG  + V       
Sbjct: 171 QIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR---VKLSDFGFCAQVSKEVPRR 227
Query: 202 VGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEF 261
             L G+  +++PE + +     + D+WSLG+++  ++ G PP+  +   +  +MI     
Sbjct: 228 KXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI-RDNL 286
Query: 262 SFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
               +    +S S K  +  LL  DP +R +A ELL HP++
Sbjct: 287 PPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 327

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 99.0 bits (245), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 113/221 (51%), Gaps = 11/221 (4%)
Query: 83  LLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEV 142
           LL NE+++MR        H NV+++Y+ Y   + + +++E   GG L D IV   R  E 
Sbjct: 72  LLFNEVVIMRDYQ-----HENVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEE 125
Query: 143 GAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGL-SSVEGYTDPV 201
             AAV   + + L+ LH   ++HRD+K ++ L  +D     +K+ DFG  + V       
Sbjct: 126 QIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR---VKLSDFGFCAQVSKEVPRR 182
Query: 202 VGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEF 261
             L G+  +++PE + +     + D+WSLG+++  ++ G PP+  +   +  +MI     
Sbjct: 183 KXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI-RDNL 241
Query: 262 SFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
               +    +S S K  +  LL  DP +R +A ELL HP++
Sbjct: 242 PPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 282

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 99.0 bits (245), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 113/221 (51%), Gaps = 11/221 (4%)
Query: 83  LLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEV 142
           LL NE+++MR        H NV+++Y+ Y   + + +++E   GG L D IV   R  E 
Sbjct: 67  LLFNEVVIMRDY-----QHENVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEE 120
Query: 143 GAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGL-SSVEGYTDPV 201
             AAV   + + L+ LH   ++HRD+K ++ L  +D     +K+ DFG  + V       
Sbjct: 121 QIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR---VKLSDFGFCAQVSKEVPRR 177
Query: 202 VGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEF 261
             L G+  +++PE + +     + D+WSLG+++  ++ G PP+  +   +  +MI     
Sbjct: 178 KXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI-RDNL 236
Query: 262 SFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
               +    +S S K  +  LL  DP +R +A ELL HP++
Sbjct: 237 PPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 277

>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation Length = 293

Iteration: 1
 Score = 99.0 bits (245), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 141/303 (46%), Gaps = 44/303 (14%)
Query: 3   QETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXX 62
           +E   L  +Y+V  +LG GGF  V  GI+ +  +   VAIK + +               
Sbjct: 1   KEKEPLESQYQVGPLLGSGGFGSVYSGIRVS--DNLPVAIKHVEK--------------- 43
Query: 63  XXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILE 122
                 G  P   +V +       E+++++K+    S    VI L D +E  +   LILE
Sbjct: 44  DRISDWGELPNGTRVPM-------EVVLLKKVSSGFS---GVIRLLDWFERPDSFVLILE 93
Query: 123 -LCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRED 181
            +    +LFD I  +    E  A +   Q+ E +   H   ++HRD+K EN L   D   
Sbjct: 94  RMEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI--DLNR 151
Query: 182 SPLKIMDFGLSSVEGYTDPVVGLF-GSIDYVSPEALLQDRITSKS-DMWSLGVILYILLS 239
             LK++DFG  ++    D V   F G+  Y  PE +   R   +S  +WSLG++LY ++ 
Sbjct: 152 GELKLIDFGSGAL--LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC 209
Query: 240 GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH 299
           G  PF      +  + I+ G+  F ++    +SS  + LI   L + P+ RP+ +E+ NH
Sbjct: 210 GDIPF------EHDEEIIRGQVFFRQR----VSSECQHLIRWCLALRPSDRPTFEEIQNH 259
Query: 300 PWV 302
           PW+
Sbjct: 260 PWM 262

>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In Complex With Adp Length = 432

Iteration: 1
 Score = 98.2 bits (243), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 119/245 (48%), Gaps = 27/245 (11%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAV--IRQIAEGLAAL 158
           HPNVI  +   +D+   ++ +ELC+        V Q+ +  +G   +  ++Q   GLA L
Sbjct: 77  HPNVIRYFCTEKDRQFQYIAIELCAA--TLQEYVEQKDFAHLGLEPITLLQQTTSGLAHL 134
Query: 159 HQANIVHRDLKPENCLFLNDREDSPLKIM--DFGLS---SVEGYT-DPVVGLFGSIDYVS 212
           H  NIVHRDLKP N L         +K M  DFGL    +V  ++     G+ G+  +++
Sbjct: 135 HSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIA 194
Query: 213 PEALLQD---RITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTW 268
           PE L +D     T   D++S G + Y ++S G  PF     RQ   ++ A          
Sbjct: 195 PEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPE- 253
Query: 269 KNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV------------IGDSAKEEEMDAEI 316
           K+    A++LI  ++ +DP +RPSA+ +L HP+             + D  ++E +D  I
Sbjct: 254 KHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWSLEKQLQFFQDVSDRIEKESLDGPI 313
Query: 317 VSRLQ 321
           V +L+
Sbjct: 314 VKQLE 318

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 98.2 bits (243), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 124/242 (51%), Gaps = 27/242 (11%)
Query: 74  RKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELF--- 130
           RK+V ++   + + +   R +++N   HP +  L   ++  + +  ++E  +GGELF   
Sbjct: 42  RKEVIIAKDEVAHTVTESR-VLQNTR-HPFLTALKYAFQTHDRLCFVMEYANGGELFFHL 99
Query: 131 --DRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMD 188
             +R+  +ER    GA     +I   L  LH  ++V+RD+K EN +     +D  +KI D
Sbjct: 100 SRERVFTEERARFYGA-----EIVSALEYLHSRDVVYRDIKLENLML---DKDGHIKITD 151
Query: 189 FGLSSVEGYTDPVV--GLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIA 246
           FGL   EG +D        G+ +Y++PE L  +      D W LGV++Y ++ G  PF  
Sbjct: 152 FGLCK-EGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 210
Query: 247 QSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR----PS-AQELLNHPW 301
           Q + +  ++I+  E  F     + +S  AK L++ LL  DP +R    PS A+E++ H +
Sbjct: 211 QDHERLFELILMEEIRFP----RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 266
Query: 302 VI 303
            +
Sbjct: 267 FL 268

>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As Potent, Highly Selective And Orally Bioavailable Pim Kinases Inhibitors Length = 294

Iteration: 1
 Score = 98.2 bits (243), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 87/305 (28%), Positives = 140/305 (45%), Gaps = 48/305 (15%)
Query: 3   QETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXX 62
           +E   L  +Y+V  +LG GGF  V  GI+ +  +   VAIK + +               
Sbjct: 2   KEKEPLESQYQVGPLLGSGGFGSVYSGIRVS--DNLPVAIKHVEK--------------- 44
Query: 63  XXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILE 122
                 G  P   +V +       E+++++K+    S    VI L D +E  +   LILE
Sbjct: 45  DRISDWGELPNGTRVPM-------EVVLLKKVSSGFS---GVIRLLDWFERPDSFVLILE 94
Query: 123 LCSG-GELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRED 181
                 +LFD I  +    E  A +   Q+ E +   H   ++HRD+K EN L   D   
Sbjct: 95  RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI--DLNR 152
Query: 182 SPLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKS-DMWSLGVILYIL 237
             LK++DFG  ++     YTD      G+  Y  PE +   R   +S  +WSLG++LY +
Sbjct: 153 GELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 208
Query: 238 LSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELL 297
           + G  PF      +  + I+ G+  F ++    +SS  + LI   L + P+ RP+ +E+ 
Sbjct: 209 VCGDIPF------EHDEEIIRGQVFFRQR----VSSECQHLIRWCLALRPSDRPTFEEIQ 258
Query: 298 NHPWV 302
           NHPW+
Sbjct: 259 NHPWM 263

>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A Ruthenium Organometallic Ligand Ru1 Length = 312

Iteration: 1
 Score = 98.2 bits (243), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 86/297 (28%), Positives = 132/297 (44%), Gaps = 46/297 (15%)
Query: 11  EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGF 70
           EY +  +LG+GGF  V  G + T  +  QVAIK + R                    +G+
Sbjct: 32  EYRLGPLLGKGGFGTVFAGHRLT--DRLQVAIKVIPR-----------------NRVLGW 72
Query: 71  FPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILE-LCSGGEL 129
            P    V+        E+ ++ K+      HP VI L D +E Q G  L+LE      +L
Sbjct: 73  SPLSDSVTCP-----LEVALLWKVGAGGG-HPGVIRLLDWFETQEGFMLVLERPLPAQDL 126
Query: 130 FDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDF 189
           FD I  +    E  +     Q+   +   H   +VHRD+K EN L   D      K++DF
Sbjct: 127 FDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILI--DLRRGCAKLIDF 184
Query: 190 GLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITS-KSDMWSLGVILYILLSGYPPFI 245
           G  ++   E YTD      G+  Y  PE + + +  +  + +WSLG++LY ++ G  PF 
Sbjct: 185 GSGALLHDEPYTD----FDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPF- 239
Query: 246 AQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
                ++ Q I+  E  F      ++S     LI   L   P+ RPS +E+L  PW+
Sbjct: 240 -----ERDQEILEAELHFP----AHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWM 287

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 98.2 bits (243), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 124/242 (51%), Gaps = 27/242 (11%)
Query: 74  RKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELF--- 130
           RK+V ++   + + +   R +++N   HP +  L   ++  + +  ++E  +GGELF   
Sbjct: 39  RKEVIIAKDEVAHTVTESR-VLQNTR-HPFLTALKYAFQTHDRLCFVMEYANGGELFFHL 96
Query: 131 --DRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMD 188
             +R+  +ER    GA     +I   L  LH  ++V+RD+K EN +     +D  +KI D
Sbjct: 97  SRERVFTEERARFYGA-----EIVSALEYLHSRDVVYRDIKLENLML---DKDGHIKITD 148
Query: 189 FGLSSVEGYTDPVV--GLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIA 246
           FGL   EG +D        G+ +Y++PE L  +      D W LGV++Y ++ G  PF  
Sbjct: 149 FGLCK-EGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 207
Query: 247 QSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR----PS-AQELLNHPW 301
           Q + +  ++I+  E  F     + +S  AK L++ LL  DP +R    PS A+E++ H +
Sbjct: 208 QDHERLFELILMEEIRFP----RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 263
Query: 302 VI 303
            +
Sbjct: 264 FL 265

>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target Of Aberrant Somatic Hypermutations In Diffuse Large Cell Lymphoma Length = 293

Iteration: 1
 Score = 98.2 bits (243), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 87/305 (28%), Positives = 140/305 (45%), Gaps = 48/305 (15%)
Query: 3   QETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXX 62
           +E   L  +Y+V  +LG GGF  V  GI+ +  +   VAIK + +               
Sbjct: 1   KEKEPLESQYQVGPLLGSGGFGSVYSGIRVS--DNLPVAIKHVEK--------------- 43
Query: 63  XXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILE 122
                 G  P   +V +       E+++++K+    S    VI L D +E  +   LILE
Sbjct: 44  DRISDWGELPNGTRVPM-------EVVLLKKVSSGFS---GVIRLLDWFERPDSFVLILE 93
Query: 123 LCSG-GELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRED 181
                 +LFD I  +    E  A +   Q+ E +   H   ++HRD+K EN L   D   
Sbjct: 94  RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI--DLNR 151
Query: 182 SPLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKS-DMWSLGVILYIL 237
             LK++DFG  ++     YTD      G+  Y  PE +   R   +S  +WSLG++LY +
Sbjct: 152 GELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 207
Query: 238 LSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELL 297
           + G  PF      +  + I+ G+  F ++    +SS  + LI   L + P+ RP+ +E+ 
Sbjct: 208 VCGDIPF------EHDEEIIRGQVFFRQR----VSSECQHLIRWCLALRPSDRPTFEEIQ 257
Query: 298 NHPWV 302
           NHPW+
Sbjct: 258 NHPWM 262

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 98.2 bits (243), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 122/238 (51%), Gaps = 27/238 (11%)
Query: 74  RKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELF--- 130
           RK+V ++   + + +   R +++N   HP +  L   ++  + +  ++E  +GGELF   
Sbjct: 39  RKEVIIAKDEVAHTVTESR-VLQNTR-HPFLTALKYAFQTHDRLCFVMEYANGGELFFHL 96
Query: 131 --DRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMD 188
             +R+  +ER    GA     +I   L  LH  ++V+RD+K EN +     +D  +KI D
Sbjct: 97  SRERVFTEERARFYGA-----EIVSALEYLHSRDVVYRDIKLENLML---DKDGHIKITD 148
Query: 189 FGLSSVEGYTDPVV--GLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIA 246
           FGL   EG +D        G+ +Y++PE L  +      D W LGV++Y ++ G  PF  
Sbjct: 149 FGLCK-EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 207
Query: 247 QSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR----PS-AQELLNH 299
           Q + +  ++I+  E  F     + +S  AK L++ LL  DP +R    PS A+E++ H
Sbjct: 208 QDHERLFELILMEEIRFP----RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 98.2 bits (243), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 122/238 (51%), Gaps = 27/238 (11%)
Query: 74  RKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELF--- 130
           RK+V ++   + + +   R +++N   HP +  L   ++  + +  ++E  +GGELF   
Sbjct: 44  RKEVIIAKDEVAHTVTESR-VLQNTR-HPFLTALKYAFQTHDRLCFVMEYANGGELFFHL 101
Query: 131 --DRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMD 188
             +R+  +ER    GA     +I   L  LH  ++V+RD+K EN +     +D  +KI D
Sbjct: 102 SRERVFTEERARFYGA-----EIVSALEYLHSRDVVYRDIKLENLML---DKDGHIKITD 153
Query: 189 FGLSSVEGYTDPVV--GLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIA 246
           FGL   EG +D        G+ +Y++PE L  +      D W LGV++Y ++ G  PF  
Sbjct: 154 FGLCK-EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 212
Query: 247 QSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR----PS-AQELLNH 299
           Q + +  ++I+  E  F     + +S  AK L++ LL  DP +R    PS A+E++ H
Sbjct: 213 QDHERLFELILMEEIRFP----RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 266

>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As Potent Pim-1 Inhibitors Length = 299

Iteration: 1
 Score = 98.2 bits (243), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 140/303 (46%), Gaps = 44/303 (14%)
Query: 3   QETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXX 62
           +E   L  +Y+V  +LG GGF  V  GI+ +  +   VAIK + +               
Sbjct: 2   KEKEPLESQYQVGPLLGSGGFGSVYSGIRVS--DNLPVAIKHVEK--------------- 44
Query: 63  XXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILE 122
                 G  P   +V +       E+++++K+    S    VI L D +E  +   LILE
Sbjct: 45  DRISDWGELPNGTRVPM-------EVVLLKKVSSGFS---GVIRLLDWFERPDSFVLILE 94
Query: 123 LCSG-GELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRED 181
                 +LFD I  +    E  A +   Q+ E +   H   ++HRD+K EN L   D   
Sbjct: 95  RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI--DLNR 152
Query: 182 SPLKIMDFGLSSVEGYTDPVVGLF-GSIDYVSPEALLQDRITSKS-DMWSLGVILYILLS 239
             LK++DFG  ++    D V   F G+  Y  PE +   R   +S  +WSLG++LY ++ 
Sbjct: 153 GELKLIDFGSGAL--LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC 210
Query: 240 GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH 299
           G  PF      +  + I+ G+  F ++    +SS  + LI   L + P+ RP+ +E+ NH
Sbjct: 211 GDIPF------EHDEEIIRGQVFFRQR----VSSECQHLIRWCLALRPSDRPTFEEIQNH 260
Query: 300 PWV 302
           PW+
Sbjct: 261 PWM 263

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 98.2 bits (243), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 124/242 (51%), Gaps = 27/242 (11%)
Query: 74  RKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELF--- 130
           RK+V ++   + + +   R +++N   HP +  L   ++  + +  ++E  +GGELF   
Sbjct: 39  RKEVIIAKDEVAHTVTESR-VLQNTR-HPFLTALKYAFQTHDRLCFVMEYANGGELFFHL 96
Query: 131 --DRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMD 188
             +R+  +ER    GA     +I   L  LH  ++V+RD+K EN +     +D  +KI D
Sbjct: 97  SRERVFTEERARFYGA-----EIVSALEYLHSRDVVYRDIKLENLML---DKDGHIKITD 148
Query: 189 FGLSSVEGYTDPVV--GLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIA 246
           FGL   EG +D        G+ +Y++PE L  +      D W LGV++Y ++ G  PF  
Sbjct: 149 FGLCK-EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 207
Query: 247 QSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR----PS-AQELLNHPW 301
           Q + +  ++I+  E  F     + +S  AK L++ LL  DP +R    PS A+E++ H +
Sbjct: 208 QDHERLFELILMEEIRFP----RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 263
Query: 302 VI 303
            +
Sbjct: 264 FL 265

>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small Molecule Inhibitor Length = 298

Iteration: 1
 Score = 98.2 bits (243), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 140/303 (46%), Gaps = 44/303 (14%)
Query: 3   QETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXX 62
           +E   L  +Y+V  +LG GGF  V  GI+ +  +   VAIK + +               
Sbjct: 2   KEKEPLESQYQVGPLLGSGGFGSVYSGIRVS--DNLPVAIKHVEK--------------- 44
Query: 63  XXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILE 122
                 G  P   +V +       E+++++K+    S    VI L D +E  +   LILE
Sbjct: 45  DRISDWGELPNGTRVPM-------EVVLLKKVSSGFS---GVIRLLDWFERPDSFVLILE 94
Query: 123 LCSG-GELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRED 181
                 +LFD I  +    E  A +   Q+ E +   H   ++HRD+K EN L   D   
Sbjct: 95  RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI--DLNR 152
Query: 182 SPLKIMDFGLSSVEGYTDPVVGLF-GSIDYVSPEALLQDRITSKS-DMWSLGVILYILLS 239
             LK++DFG  ++    D V   F G+  Y  PE +   R   +S  +WSLG++LY ++ 
Sbjct: 153 GELKLIDFGSGAL--LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC 210
Query: 240 GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH 299
           G  PF      +  + I+ G+  F ++    +SS  + LI   L + P+ RP+ +E+ NH
Sbjct: 211 GDIPF------EHDEEIIRGQVFFRQR----VSSECQHLIRWCLALRPSDRPTFEEIQNH 260
Query: 300 PWV 302
           PW+
Sbjct: 261 PWM 263

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 98.2 bits (243), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 124/242 (51%), Gaps = 27/242 (11%)
Query: 74  RKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELF--- 130
           RK+V ++   + + +   R +++N   HP +  L   ++  + +  ++E  +GGELF   
Sbjct: 39  RKEVIIAKDEVAHTVTESR-VLQNTR-HPFLTALKYAFQTHDRLCFVMEYANGGELFFHL 96
Query: 131 --DRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMD 188
             +R+  +ER    GA     +I   L  LH  ++V+RD+K EN +     +D  +KI D
Sbjct: 97  SRERVFTEERARFYGA-----EIVSALEYLHSRDVVYRDIKLENLML---DKDGHIKITD 148
Query: 189 FGLSSVEGYTDPVV--GLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIA 246
           FGL   EG +D        G+ +Y++PE L  +      D W LGV++Y ++ G  PF  
Sbjct: 149 FGLCK-EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 207
Query: 247 QSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR----PS-AQELLNHPW 301
           Q + +  ++I+  E  F     + +S  AK L++ LL  DP +R    PS A+E++ H +
Sbjct: 208 QDHERLFELILMEEIRFP----RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 263
Query: 302 VI 303
            +
Sbjct: 264 FL 265

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 97.8 bits (242), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 124/242 (51%), Gaps = 27/242 (11%)
Query: 74  RKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELF--- 130
           RK+V ++   + + +   R +++N   HP +  L   ++  + +  ++E  +GGELF   
Sbjct: 39  RKEVIIAKDEVAHTVTESR-VLQNTR-HPFLTALKYAFQTHDRLCFVMEYANGGELFFHL 96
Query: 131 --DRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMD 188
             +R+  +ER    GA     +I   L  LH  ++V+RD+K EN +     +D  +KI D
Sbjct: 97  SRERVFTEERARFYGA-----EIVSALEYLHSRDVVYRDIKLENLML---DKDGHIKITD 148
Query: 189 FGLSSVEGYTDPVV--GLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIA 246
           FGL   EG +D        G+ +Y++PE L  +      D W LGV++Y ++ G  PF  
Sbjct: 149 FGLCK-EGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 207
Query: 247 QSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR----PS-AQELLNHPW 301
           Q + +  ++I+  E  F     + +S  AK L++ LL  DP +R    PS A+E++ H +
Sbjct: 208 QDHERLFELILMEEIRFP----RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 263
Query: 302 VI 303
            +
Sbjct: 264 FL 265

>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor Length = 276

Iteration: 1
 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/302 (28%), Positives = 139/302 (46%), Gaps = 44/302 (14%)
Query: 4   ETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXX 63
           E   L  +Y+V  +LG GGF  V  GI+ +  +   VAIK + +                
Sbjct: 1   EKEPLESQYQVGPLLGSGGFGSVYSGIRVS--DNLPVAIKHVEK---------------D 43
Query: 64  XXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILEL 123
                G  P   +V +       E+++++K+    S    VI L D +E  +   LILE 
Sbjct: 44  RISDWGELPNGTRVPM-------EVVLLKKVSSGFS---GVIRLLDWFERPDSFVLILER 93
Query: 124 CSG-GELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDS 182
                +LFD I  +    E  A +   Q+ E +   H   ++HRD+K EN L   D    
Sbjct: 94  PEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI--DLNRG 151
Query: 183 PLKIMDFGLSSVEGYTDPVVGLF-GSIDYVSPEALLQDRITSKS-DMWSLGVILYILLSG 240
            LK++DFG  ++    D V   F G+  Y  PE +   R   +S  +WSLG++LY ++ G
Sbjct: 152 ELKLIDFGSGAL--LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 209
Query: 241 YPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHP 300
             PF      +  + I+ G+  F ++    +SS  + LI   L + P+ RP+ +E+ NHP
Sbjct: 210 DIPF------EHDEEIIRGQVFFRQR----VSSECQHLIRWCLALRPSDRPTFEEIQNHP 259
Query: 301 WV 302
           W+
Sbjct: 260 WM 261

>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors Length = 273

Iteration: 1
 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/298 (28%), Positives = 138/298 (46%), Gaps = 44/298 (14%)
Query: 8   LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQ 67
           L  +Y+V  +LG GGF  V  GI+ +  +   VAIK + +                    
Sbjct: 2   LESQYQVGPLLGSGGFGSVYSGIRVS--DNLPVAIKHVEK---------------DRISD 44
Query: 68  IGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSG- 126
            G  P   +V +       E+++++K+    S    VI L D +E  +   LILE     
Sbjct: 45  WGELPNGTRVPM-------EVVLLKKVSSGFS---GVIRLLDWFERPDSFVLILERPEPV 94
Query: 127 GELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKI 186
            +LFD I  +    E  A +   Q+ E +   H   ++HRD+K EN L   D     LK+
Sbjct: 95  QDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKL 152
Query: 187 MDFGLSSVEGYTDPVVGLF-GSIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPF 244
           +DFG  ++    D V   F G+  Y  PE +   R   +S  +WSLG++LY ++ G  PF
Sbjct: 153 IDFGSGAL--LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 210
Query: 245 IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
                 +  + I+ G+  F ++    +SS  + LI   L + P+ RP+ +E+ NHPW+
Sbjct: 211 ------EHDEEIIGGQVFFRQR----VSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 258

>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7- Azaindole Length = 273

Iteration: 1
 Score = 96.3 bits (238), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 86/298 (28%), Positives = 138/298 (46%), Gaps = 44/298 (14%)
Query: 8   LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQ 67
           L  +Y+V  +LG GGF  V  GI+ +  +   VAIK + +                    
Sbjct: 2   LESQYQVGPLLGSGGFGSVYSGIRVS--DNLPVAIKHVEK---------------DRISD 44
Query: 68  IGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSG- 126
            G  P   +V +       E+++++K+    S    VI L D +E  +   LILE     
Sbjct: 45  WGELPNGTRVPM-------EVVLLKKVSSGFS---GVIRLLDWFERPDSFVLILERPEPV 94
Query: 127 GELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKI 186
            +LFD I  +    E  A +   Q+ E +   H   ++HRD+K EN L   D     LK+
Sbjct: 95  QDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKL 152
Query: 187 MDFGLSSVEGYTDPVVGLF-GSIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPF 244
           +DFG  ++    D V   F G+  Y  PE +   R   +S  +WSLG++LY ++ G  PF
Sbjct: 153 IDFGSGAL--LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 210
Query: 245 IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
                 +  + I+ G+  F ++    +SS  + LI   L + P+ RP+ +E+ NHPW+
Sbjct: 211 ------EHDEEIIRGQVFFRQR----VSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 258

>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546 Length = 308

Iteration: 1
 Score = 96.3 bits (238), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 86/305 (28%), Positives = 139/305 (45%), Gaps = 48/305 (15%)
Query: 3   QETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXX 62
           +E   L  +Y+V  +LG GGF  V  GI+ +  +   VAIK + +               
Sbjct: 24  KEKEPLESQYQVGPLLGSGGFGSVYSGIRVS--DNLPVAIKHVEK--------------- 66
Query: 63  XXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILE 122
                 G  P   +V +       E+++++K+    S    VI L D +E  +   LILE
Sbjct: 67  DRISDWGELPNGTRVPM-------EVVLLKKVSSGFS---GVIRLLDWFERPDSFVLILE 116
Query: 123 LCSG-GELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRED 181
                 +LFD I  +    E  A +   Q+ E +   H   ++HRD+K EN L   D   
Sbjct: 117 RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI--DLNR 174
Query: 182 SPLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKS-DMWSLGVILYIL 237
             LK++DFG  ++     YTD      G+  Y  PE +   R   +S  +WSLG++LY +
Sbjct: 175 GELKLIDFGSGALLKDTVYTD----FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 230
Query: 238 LSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELL 297
           + G  PF      +  + I+ G+  F ++    +S   + LI   L + P+ RP+ +E+ 
Sbjct: 231 VCGDIPF------EHDEEIIRGQVFFRQR----VSXECQHLIRWCLALRPSDRPTFEEIQ 280
Query: 298 NHPWV 302
           NHPW+
Sbjct: 281 NHPWM 285

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score = 96.3 bits (238), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 86/316 (27%), Positives = 143/316 (45%), Gaps = 58/316 (18%)
Query: 2   GQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXX 61
           G   R   +E+E   +LG+G F  V    +K  G     A+K L+               
Sbjct: 1   GAMARVTMNEFEYLKLLGKGTFGKVILVKEKATG--RYYAMKILK--------------- 43
Query: 62  XXXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLIL 121
                        K+V V+   + +  L   ++++N S HP +  L   ++  + +  ++
Sbjct: 44  -------------KEVIVAKDEVAH-TLTENRVLQN-SRHPFLTALKYSFQTHDRLCFVM 88
Query: 122 ELCSGGELF-----DRIVAQERYMEVGAAAVIRQIAEGLAALH-QANIVHRDLKPENCLF 175
           E  +GGELF     +R+ +++R    GA     +I   L  LH + N+V+RDLK EN + 
Sbjct: 89  EYANGGELFFHLSRERVFSEDRARFYGA-----EIVSALDYLHSEKNVVYRDLKLENLML 143
Query: 176 LNDREDSPLKIMDFGLSSVEGYTDPVV--GLFGSIDYVSPEALLQDRITSKSDMWSLGVI 233
               +D  +KI DFGL   EG  D        G+ +Y++PE L  +      D W LGV+
Sbjct: 144 ---DKDGHIKITDFGLCK-EGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 199
Query: 234 LYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR--- 290
           +Y ++ G  PF  Q + +  ++I+  E  F     + +   AK L+S LL  DP +R   
Sbjct: 200 MYEMMCGRLPFYNQDHEKLFELILMEEIRFP----RTLGPEAKSLLSGLLKKDPKQRLGG 255
Query: 291 --PSAQELLNHPWVIG 304
               A+E++ H +  G
Sbjct: 256 GSEDAKEIMQHRFFAG 271

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 95.9 bits (237), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 118/240 (49%), Gaps = 20/240 (8%)
Query: 73  TRKQVSVSDA---------LLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILEL 123
           T KQV+V            LL NE+++MR        H NV+D+Y  Y   + + +++E 
Sbjct: 69  TGKQVAVKKMDLRKQQRRELLFNEVVIMRDY-----HHDNVVDMYSSYLVGDELWVVMEF 123
Query: 124 CSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSP 183
             GG L D IV   R  E   A V   +   L+ LH   ++HRD+K ++ L  +D     
Sbjct: 124 LEGGALTD-IVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGR--- 179
Query: 184 LKIMDFGL-SSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYP 242
           +K+ DFG  + V         L G+  +++PE + +    ++ D+WSLG+++  ++ G P
Sbjct: 180 IKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEP 239
Query: 243 PFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
           P+  +   Q  + I         +    +SS  +  +  +L  +P++R +AQELL HP++
Sbjct: 240 PYFNEPPLQAMRRI-RDSLPPRVKDLHKVSSVLRGFLDLMLVREPSQRATAQELLGHPFL 298

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score = 95.9 bits (237), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 123/244 (50%), Gaps = 28/244 (11%)
Query: 74  RKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELF--- 130
           +K+V V+   + +  L   ++++N S HP +  L   ++  + +  ++E  +GGELF   
Sbjct: 185 KKEVIVAKDEVAH-TLTENRVLQN-SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL 242
Query: 131 --DRIVAQERYMEVGAAAVIRQIAEGLAALH-QANIVHRDLKPENCLFLNDREDSPLKIM 187
             +R+ +++R    GA     +I   L  LH + N+V+RDLK EN +     +D  +KI 
Sbjct: 243 SRERVFSEDRARFYGA-----EIVSALDYLHSEKNVVYRDLKLENLML---DKDGHIKIT 294
Query: 188 DFGLSSVEGYTDPVV--GLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFI 245
           DFGL   EG  D        G+ +Y++PE L  +      D W LGV++Y ++ G  PF 
Sbjct: 295 DFGLCK-EGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY 353
Query: 246 AQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR-----PSAQELLNHP 300
            Q + +  ++I+  E  F     + +   AK L+S LL  DP +R       A+E++ H 
Sbjct: 354 NQDHEKLFELILMEEIRFP----RTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHR 409
Query: 301 WVIG 304
           +  G
Sbjct: 410 FFAG 413

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score = 95.9 bits (237), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 85/313 (27%), Positives = 143/313 (45%), Gaps = 58/313 (18%)
Query: 5   TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXX 64
           +R   +E+E   +LG+G F  V    +K  G     A+K L+                  
Sbjct: 3   SRVTMNEFEYLKLLGKGTFGKVILVKEKATG--RYYAMKILK------------------ 42
Query: 65  XXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELC 124
                     K+V V+   + +  L   ++++N S HP +  L   ++  + +  ++E  
Sbjct: 43  ----------KEVIVAKDEVAH-TLTENRVLQN-SRHPFLTALKYSFQTHDRLCFVMEYA 90
Query: 125 SGGELF-----DRIVAQERYMEVGAAAVIRQIAEGLAALH-QANIVHRDLKPENCLFLND 178
           +GGELF     +R+ +++R    GA     +I   L  LH + N+V+RDLK EN +    
Sbjct: 91  NGGELFFHLSRERVFSEDRARFYGA-----EIVSALDYLHSEKNVVYRDLKLENLML--- 142
Query: 179 REDSPLKIMDFGLSSVEGYTDPVV--GLFGSIDYVSPEALLQDRITSKSDMWSLGVILYI 236
            +D  +KI DFGL   EG  D        G+ +Y++PE L  +      D W LGV++Y 
Sbjct: 143 DKDGHIKITDFGLCK-EGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 201
Query: 237 LLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR-----P 291
           ++ G  PF  Q + +  ++I+  E  F     + +   AK L+S LL  DP +R      
Sbjct: 202 MMCGRLPFYNQDHEKLFELILMEEIRFP----RTLGPEAKSLLSGLLKKDPKQRLGGGSE 257
Query: 292 SAQELLNHPWVIG 304
            A+E++ H +  G
Sbjct: 258 DAKEIMQHRFFAG 270

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score = 95.9 bits (237), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 123/244 (50%), Gaps = 28/244 (11%)
Query: 74  RKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELF--- 130
           +K+V V+   + +  L   ++++N S HP +  L   ++  + +  ++E  +GGELF   
Sbjct: 182 KKEVIVAKDEVAH-TLTENRVLQN-SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL 239
Query: 131 --DRIVAQERYMEVGAAAVIRQIAEGLAALH-QANIVHRDLKPENCLFLNDREDSPLKIM 187
             +R+ +++R    GA     +I   L  LH + N+V+RDLK EN +     +D  +KI 
Sbjct: 240 SRERVFSEDRARFYGA-----EIVSALDYLHSEKNVVYRDLKLENLML---DKDGHIKIT 291
Query: 188 DFGLSSVEGYTDPVV--GLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFI 245
           DFGL   EG  D        G+ +Y++PE L  +      D W LGV++Y ++ G  PF 
Sbjct: 292 DFGLCK-EGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY 350
Query: 246 AQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR-----PSAQELLNHP 300
            Q + +  ++I+  E  F     + +   AK L+S LL  DP +R       A+E++ H 
Sbjct: 351 NQDHEKLFELILMEEIRFP----RTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHR 406
Query: 301 WVIG 304
           +  G
Sbjct: 407 FFAG 410

>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298

Iteration: 1
 Score = 95.5 bits (236), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 142/301 (47%), Gaps = 25/301 (8%)
Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQI- 68
           ++Y + D +G+G + VV+    +   +    A+K L +       GFP            
Sbjct: 13  NQYTLKDEIGKGSYGVVKLAYNEN--DNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAP 70
Query: 69  -GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHL--ILELCS 125
            G    R  +      +  EI +++K+      HPNV+ L +V +D N  HL  + EL +
Sbjct: 71  GGCIQPRGPIE----QVYQEIAILKKL-----DHPNVVKLVEVLDDPNEDHLYMVFELVN 121
Query: 126 GGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLK 185
            G + + +   +   E  A    + + +G+  LH   I+HRD+KP N L     ED  +K
Sbjct: 122 QGPVME-VPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLV---GEDGHIK 177
Query: 186 IMDFGLSSVEGYTDPVVG-LFGSIDYVSPEALLQDR--ITSKS-DMWSLGVILYILLSGY 241
           I DFG+S+    +D ++    G+  +++PE+L + R   + K+ D+W++GV LY  + G 
Sbjct: 178 IADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
Query: 242 PPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPW 301
            PF+ +        I +    F +Q   +I+   K LI+ +L  +P  R    E+  HPW
Sbjct: 238 CPFMDERIMCLHSKIKSQALEFPDQP--DIAEDLKDLITRMLDKNPESRIVVPEIKLHPW 295
Query: 302 V 302
           V
Sbjct: 296 V 296

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score = 95.5 bits (236), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 123/244 (50%), Gaps = 28/244 (11%)
Query: 74  RKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELF--- 130
           +K+V V+   + +  L   ++++N S HP +  L   ++  + +  ++E  +GGELF   
Sbjct: 44  KKEVIVAKDEVAH-TLTENRVLQN-SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL 101
Query: 131 --DRIVAQERYMEVGAAAVIRQIAEGLAALH-QANIVHRDLKPENCLFLNDREDSPLKIM 187
             +R+ +++R    GA     +I   L  LH + N+V+RDLK EN +     +D  +KI 
Sbjct: 102 SRERVFSEDRARFYGA-----EIVSALDYLHSEKNVVYRDLKLENLML---DKDGHIKIT 153
Query: 188 DFGLSSVEGYTDPVV--GLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFI 245
           DFGL   EG  D        G+ +Y++PE L  +      D W LGV++Y ++ G  PF 
Sbjct: 154 DFGLCK-EGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY 212
Query: 246 AQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR-----PSAQELLNHP 300
            Q + +  ++I+  E  F     + +   AK L+S LL  DP +R       A+E++ H 
Sbjct: 213 NQDHEKLFELILMEEIRFP----RTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHR 268
Query: 301 WVIG 304
           +  G
Sbjct: 269 FFAG 272

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 94.7 bits (234), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 116/219 (52%), Gaps = 13/219 (5%)
Query: 83  LLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEV 142
           L+ NEILVMR+     + +PN+++  D Y   + + +++E  +GG L D  V  E  M+ 
Sbjct: 63  LIINEILVMRE-----NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD--VVTETCMDE 115
Query: 143 GA-AAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGL-SSVEGYTDP 200
           G  AAV R+  + L  LH   ++HRD+K +N L      D  +K+ DFG  + +      
Sbjct: 116 GQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQITPEQSK 172
Query: 201 VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGE 260
              + G+  +++PE + +     K D+WSLG++   ++ G PP++ + N  +   ++A  
Sbjct: 173 RSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE-NPLRALYLIATN 231
Query: 261 FSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH 299
            +   Q  + +S+  +  ++  L +D  +R SA+ELL H
Sbjct: 232 GTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 270

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 94.7 bits (234), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 116/219 (52%), Gaps = 13/219 (5%)
Query: 83  LLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEV 142
           L+ NEILVMR+     + +PN+++  D Y   + + +++E  +GG L D  V  E  M+ 
Sbjct: 63  LIINEILVMRE-----NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD--VVTETCMDE 115
Query: 143 GA-AAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGL-SSVEGYTDP 200
           G  AAV R+  + L  LH   ++HRD+K +N L      D  +K+ DFG  + +      
Sbjct: 116 GQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQITPEQSK 172
Query: 201 VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGE 260
              + G+  +++PE + +     K D+WSLG++   ++ G PP++ + N  +   ++A  
Sbjct: 173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE-NPLRALYLIATN 231
Query: 261 FSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH 299
            +   Q  + +S+  +  ++  L +D  +R SA+ELL H
Sbjct: 232 GTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 94.4 bits (233), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 116/219 (52%), Gaps = 13/219 (5%)
Query: 83  LLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEV 142
           L+ NEILVMR+     + +PN+++  D Y   + + +++E  +GG L D  V  E  M+ 
Sbjct: 63  LIINEILVMRE-----NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD--VVTETCMDE 115
Query: 143 GA-AAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGL-SSVEGYTDP 200
           G  AAV R+  + L  LH   ++HRD+K +N L      D  +K+ DFG  + +      
Sbjct: 116 GQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQITPEQSK 172
Query: 201 VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGE 260
              + G+  +++PE + +     K D+WSLG++   ++ G PP++ + N  +   ++A  
Sbjct: 173 RSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE-NPLRALYLIATN 231
Query: 261 FSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH 299
            +   Q  + +S+  +  ++  L +D  +R SA+ELL H
Sbjct: 232 GTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 94.4 bits (233), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 104/205 (50%), Gaps = 9/205 (4%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQER--YMEVGAAAVIRQIAEGLAAL 158
           HPN++   + +E+   ++++++ C GG+LF RI AQ+   + E        QI   L  +
Sbjct: 82  HPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHV 141
Query: 159 HQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVV-GLFGSIDYVSPEALL 217
           H   I+HRD+K +N +FL   +D  +++ DFG++ V   T  +     G+  Y+SPE   
Sbjct: 142 HDRKILHRDIKSQN-IFLT--KDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICE 198
Query: 218 QDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQ 277
                +KSD+W+LG +LY L +    F A S +     I++G F      +   S   + 
Sbjct: 199 NKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHY---SYDLRS 255
Query: 278 LISSLLTVDPNRRPSAQELLNHPWV 302
           L+S L   +P  RPS   +L   ++
Sbjct: 256 LVSQLFKRNPRDRPSVNSILEKGFI 280

>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine Length = 273

Iteration: 1
 Score = 94.0 bits (232), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/298 (28%), Positives = 137/298 (45%), Gaps = 44/298 (14%)
Query: 8   LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQ 67
           L  +Y+V  +LG GGF  V  GI+ +  +   VAIK + +                    
Sbjct: 2   LESQYQVGPLLGSGGFGSVYSGIRVS--DNLPVAIKHVEK---------------DRISD 44
Query: 68  IGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSG- 126
            G  P   +V +       E+++++K+    S    VI L D +E  +   LILE     
Sbjct: 45  WGELPNGTRVPM-------EVVLLKKVSSGFS---GVIRLLDWFERPDSFVLILERPEPV 94
Query: 127 GELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKI 186
            +LFD I  +    E  A +   Q+ E +   H   ++HRD+K EN L   D     LK+
Sbjct: 95  QDLFDFITERGALQEELARSFFWQVLEAVRHCHNXGVLHRDIKDENILI--DLNRGELKL 152
Query: 187 MDFGLSSVEGYTDPVVGLF-GSIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPF 244
           +DFG  ++    D V   F G+  Y  PE +   R   +S  +WSLG++LY ++ G  PF
Sbjct: 153 IDFGSGAL--LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 210
Query: 245 IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
                 +  + I+ G+  F ++    +S   + LI   L + P+ RP+ +E+ NHPW+
Sbjct: 211 ------EHDEEIIRGQVFFRQR----VSXECQHLIRWCLALRPSDRPTFEEIQNHPWM 258

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 94.0 bits (232), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 116/219 (52%), Gaps = 13/219 (5%)
Query: 83  LLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEV 142
           L+ NEILVMR+     + +PN+++  D Y   + + +++E  +GG L D  V  E  M+ 
Sbjct: 64  LIINEILVMRE-----NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD--VVTETCMDE 116
Query: 143 GA-AAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGL-SSVEGYTDP 200
           G  AAV R+  + L  LH   ++HRD+K +N L      D  +K+ DFG  + +      
Sbjct: 117 GQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQITPEQSK 173
Query: 201 VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGE 260
              + G+  +++PE + +     K D+WSLG++   ++ G PP++ + N  +   ++A  
Sbjct: 174 RSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE-NPLRALYLIATN 232
Query: 261 FSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH 299
            +   Q  + +S+  +  ++  L +D  +R SA+EL+ H
Sbjct: 233 GTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELIQH 271

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 92.8 bits (229), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 101/214 (47%), Gaps = 9/214 (4%)
Query: 89  LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVI 148
           +V ++++     HP +  ++  ++ +  +  ++E  +GG+L   I +  ++    A    
Sbjct: 65  MVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYA 124
Query: 149 RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF-GS 207
            +I  GL  LH   IV+RDLK +N L     +D  +KI DFG+       D     F G+
Sbjct: 125 AEIILGLQFLHSKGIVYRDLKLDNILL---DKDGHIKIADFGMCKENMLGDAKTNXFCGT 181
Query: 208 IDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQT 267
            DY++PE LL  +     D WS GV+LY +L G  PF  Q   +    I      FY + 
Sbjct: 182 PDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDN-PFYPR- 239
Query: 268 WKNISSSAKQLISSLLTVDPNRRPSAQ-ELLNHP 300
           W  +   AK L+  L   +P +R   + ++  HP
Sbjct: 240 W--LEKEAKDLLVKLFVREPEKRLGVRGDIRQHP 271

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 92.0 bits (227), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 116/219 (52%), Gaps = 13/219 (5%)
Query: 83  LLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEV 142
           L+ NEILVMR+     + +PN+++  D Y   + + +++E  +GG L D  V  E  M+ 
Sbjct: 64  LIINEILVMRE-----NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD--VVTETCMDE 116
Query: 143 GA-AAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGL-SSVEGYTDP 200
           G  AAV R+  + L  LH   ++HR++K +N L      D  +K+ DFG  + +      
Sbjct: 117 GQIAAVCRECLQALEFLHSNQVIHRNIKSDNILL---GMDGSVKLTDFGFCAQITPEQSK 173
Query: 201 VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGE 260
              + G+  +++PE + +     K D+WSLG++   ++ G PP++ + N  +   ++A  
Sbjct: 174 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE-NPLRALYLIATN 232
Query: 261 FSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH 299
            +   Q  + +S+  +  ++  L +D  +R SA+EL+ H
Sbjct: 233 GTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELIQH 271

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 92.0 bits (227), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 101/214 (47%), Gaps = 9/214 (4%)
Query: 89  LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVI 148
           +V ++++     HP +  ++  ++ +  +  ++E  +GG+L   I +  ++    A    
Sbjct: 66  MVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYA 125
Query: 149 RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF-GS 207
            +I  GL  LH   IV+RDLK +N L     +D  +KI DFG+       D     F G+
Sbjct: 126 AEIILGLQFLHSKGIVYRDLKLDNILL---DKDGHIKIADFGMCKENMLGDAKTNEFCGT 182
Query: 208 IDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQT 267
            DY++PE LL  +     D WS GV+LY +L G  PF  Q   +    I      FY + 
Sbjct: 183 PDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDN-PFYPR- 240
Query: 268 WKNISSSAKQLISSLLTVDPNRRPSAQ-ELLNHP 300
           W  +   AK L+  L   +P +R   + ++  HP
Sbjct: 241 W--LEKEAKDLLVKLFVREPEKRLGVRGDIRQHP 272

>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp Length = 335

Iteration: 1
 Score = 90.5 bits (223), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 109/221 (49%), Gaps = 20/221 (9%)
Query: 84  LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILE-LCSGGELFDRIVAQERYMEV 142
           +T EI ++ ++      H N+I + D++E+Q    L++E   SG +LF  I    R  E 
Sbjct: 76  VTLEIAILSRV-----EHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEP 130
Query: 143 GAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVV 202
            A+ + RQ+   +  L   +I+HRD+K EN +     ED  +K++DFG ++         
Sbjct: 131 LASYIFRQLVSAVGYLRLKDIIHRDIKDENIVI---AEDFTIKLIDFGSAAYLERGKLFY 187
Query: 203 GLFGSIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEF 261
              G+I+Y +PE L+ +       +MWSLGV LY L+    PF      + ++ + A   
Sbjct: 188 TFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFC-----ELEETVEAAIH 242
Query: 262 SFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
             Y      +S     L+S LL   P RR + ++L+  PWV
Sbjct: 243 PPY-----LVSKELMSLVSGLLQPVPERRTTLEKLVTDPWV 278

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 89.7 bits (221), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 109/233 (46%), Gaps = 29/233 (12%)
Query: 104 VIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANI 163
           V   Y  Y   + + +I+E   GG   D + A   + E   A ++++I +GL  LH    
Sbjct: 83  VTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGP-FDEFQIATMLKEILKGLDYLHSEKK 141
Query: 164 VHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF-GSIDYVSPEALLQDRIT 222
           +HRD+K  N L     E   +K+ DFG++     T      F G+  +++PE + Q    
Sbjct: 142 IHRDIKAANVLL---SEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYD 198
Query: 223 SKSDMWSLGVILYILLSGYPP----------FIAQSNRQKQQMIMAGEFSFYEQTWKNIS 272
           SK+D+WSLG+    L  G PP          F+   N       + G+F+          
Sbjct: 199 SKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPP---TLVGDFT---------- 245
Query: 273 SSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAKEEEMDAEIVSRLQSFNA 325
            S K+ I + L  DP+ RP+A+ELL H +++ +S K   +  E++ R + + A
Sbjct: 246 KSFKEFIDACLNKDPSFRPTAKELLKHKFIVKNSKKTSYL-TELIDRFKRWKA 297

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 89.7 bits (221), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 80/312 (25%), Positives = 138/312 (44%), Gaps = 60/312 (19%)
Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCG-ETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQI 68
           D+YE+ +++G G  +VV+      C  +  +VAIK +                       
Sbjct: 15  DDYELQEVIGSGATAVVQAAY---CAPKKEKVAIKRINL--------------------- 50
Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
                + Q S+ +  L  EI  M +       HPN++  Y  +  ++ + L+++L SGG 
Sbjct: 51  ----EKCQTSMDE--LLKEIQAMSQ-----CHHPNIVSYYTSFVVKDELWLVMKLLSGGS 99
Query: 129 LFD---RIVAQERYM-----EVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRE 180
           + D    IVA+  +      E   A ++R++ EGL  LH+   +HRD+K  N L     E
Sbjct: 100 VLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILL---GE 156
Query: 181 DSPLKIMDFGLSSVEGYTDPVV------GLFGSIDYVSPEALLQDR-ITSKSDMWSLGVI 233
           D  ++I DFG+S+       +          G+  +++PE + Q R    K+D+WS G+ 
Sbjct: 157 DGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGIT 216
Query: 234 LYILLSGYPPFIAQSNRQKQQMIMAGEFSFYE------QTWKNISSSAKQLISSLLTVDP 287
              L +G  P+      +   + +  +    E      +  K    S +++IS  L  DP
Sbjct: 217 AIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDP 276
Query: 288 NRRPSAQELLNH 299
            +RP+A ELL H
Sbjct: 277 EKRPTAAELLRH 288

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 89.0 bits (219), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 80/312 (25%), Positives = 138/312 (44%), Gaps = 60/312 (19%)
Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCG-ETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQI 68
           D+YE+ +++G G  +VV+      C  +  +VAIK +                       
Sbjct: 10  DDYELQEVIGSGATAVVQAAY---CAPKKEKVAIKRINL--------------------- 45
Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
                + Q S+ +  L  EI  M +       HPN++  Y  +  ++ + L+++L SGG 
Sbjct: 46  ----EKCQTSMDE--LLKEIQAMSQ-----CHHPNIVSYYTSFVVKDELWLVMKLLSGGS 94
Query: 129 LFD---RIVAQERYM-----EVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRE 180
           + D    IVA+  +      E   A ++R++ EGL  LH+   +HRD+K  N L     E
Sbjct: 95  VLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILL---GE 151
Query: 181 DSPLKIMDFGLSSVEGYTDPVV------GLFGSIDYVSPEALLQDR-ITSKSDMWSLGVI 233
           D  ++I DFG+S+       +          G+  +++PE + Q R    K+D+WS G+ 
Sbjct: 152 DGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGIT 211
Query: 234 LYILLSGYPPFIAQSNRQKQQMIMAGEFSFYE------QTWKNISSSAKQLISSLLTVDP 287
              L +G  P+      +   + +  +    E      +  K    S +++IS  L  DP
Sbjct: 212 AIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDP 271
Query: 288 NRRPSAQELLNH 299
            +RP+A ELL H
Sbjct: 272 EKRPTAAELLRH 283

>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353

Iteration: 1
 Score = 89.0 bits (219), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 75/304 (24%), Positives = 129/304 (42%), Gaps = 55/304 (18%)
Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIG 69
           D +E   +LG+G F  V     K  G+    A+K L++                      
Sbjct: 23  DNFEFIRVLGKGSFGKVMLARVKETGDL--YAVKVLKK---------------------- 58
Query: 70  FFPTRKQVSVSDALLTNE----ILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCS 125
                      D +L ++     +  ++I+     HP +  L+  ++  + +  ++E  +
Sbjct: 59  -----------DVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVN 107
Query: 126 GGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLK 185
           GG+L   I    R+ E  A     +I   L  LH   I++RDLK +N L   D E    K
Sbjct: 108 GGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLL--DHEGH-CK 164
Query: 186 IMDFGLSSVEGYTDPVV--GLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPP 243
           + DFG+   EG  + V      G+ DY++PE L +       D W++GV+LY +L G+ P
Sbjct: 165 LADFGMCK-EGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAP 223
Query: 244 FIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSA------QELL 297
           F A++     + I+  E  +   TW  +   A  ++ S +T +P  R  +        +L
Sbjct: 224 FEAENEDDLFEAILNDEVVY--PTW--LHEDATGILKSFMTKNPTMRLGSLTQGGEHAIL 279
Query: 298 NHPW 301
            HP+
Sbjct: 280 RHPF 283

>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric KinaseRNASE Ire1 Length = 448

Iteration: 1
 Score = 88.6 bits (218), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 120/248 (48%), Gaps = 34/248 (13%)
Query: 93  KIVENVSPHPNVIDLYDVYEDQNGVHLILELCS--------GGELFDRIVAQERYMEVGA 144
           K++     HPNVI  Y        +++ LELC+           + D  +  ++  E   
Sbjct: 78  KLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQK--EYNP 135
Query: 145 AAVIRQIAEGLAALHQANIVHRDLKPENCL------FLNDR----EDSPLKIMDFGL--- 191
            +++RQIA G+A LH   I+HRDLKP+N L      F  D+    E+  + I DFGL   
Sbjct: 136 ISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKK 195
Query: 192 --SSVEGYTDPVVGLFGSIDYVSPEAL---LQDRITSKSDMWSLGVILYILLS-GYPPFI 245
             S    +   +    G+  + +PE L    + R+T   D++S+G + Y +LS G  PF 
Sbjct: 196 LDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFG 255
Query: 246 AQSNRQKQQMIMAGEFSFYEQTW---KNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
            + +R+    I+ G FS  E      +++ + A  LIS ++  DP +RP+A ++L HP  
Sbjct: 256 DKYSRESN--IIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 313
Query: 303 IGDSAKEE 310
              S K E
Sbjct: 314 WPKSKKLE 321

>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The Kinase-Ribonuclease Domain Of Ire1 Length = 448

Iteration: 1
 Score = 88.6 bits (218), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 120/248 (48%), Gaps = 34/248 (13%)
Query: 93  KIVENVSPHPNVIDLYDVYEDQNGVHLILELCS--------GGELFDRIVAQERYMEVGA 144
           K++     HPNVI  Y        +++ LELC+           + D  +  ++  E   
Sbjct: 78  KLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQK--EYNP 135
Query: 145 AAVIRQIAEGLAALHQANIVHRDLKPENCL------FLNDR----EDSPLKIMDFGL--- 191
            +++RQIA G+A LH   I+HRDLKP+N L      F  D+    E+  + I DFGL   
Sbjct: 136 ISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKK 195
Query: 192 --SSVEGYTDPVVGLFGSIDYVSPEAL---LQDRITSKSDMWSLGVILYILLS-GYPPFI 245
             S    +   +    G+  + +PE L    + R+T   D++S+G + Y +LS G  PF 
Sbjct: 196 LDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFG 255
Query: 246 AQSNRQKQQMIMAGEFSFYEQTW---KNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
            + +R+    I+ G FS  E      +++ + A  LIS ++  DP +RP+A ++L HP  
Sbjct: 256 DKYSRESN--IIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 313
Query: 303 IGDSAKEE 310
              S K E
Sbjct: 314 WPKSKKLE 321

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 88.6 bits (218), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 72/235 (30%), Positives = 124/235 (52%), Gaps = 22/235 (9%)
Query: 72  PTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFD 131
           PT +Q+        NE+ V+RK     + H N++ L+  Y  +  + ++ + C G  L+ 
Sbjct: 47  PTPQQLQA----FKNEVGVLRK-----TRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYH 96
Query: 132 RIVAQERYMEVGAAA-VIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFG 190
            + A E   E+     + RQ A G+  LH  +I+HRDLK  N +FL+  ED+ +KI DFG
Sbjct: 97  HLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNN-IFLH--EDNTVKIGDFG 153
Query: 191 LSSVEGY---TDPVVGLFGSIDYVSPEAL-LQDR--ITSKSDMWSLGVILYILLSGYPPF 244
           L++V+     +     L GSI +++PE + +QD    + +SD+++ G++LY L++G  P+
Sbjct: 154 LATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPY 213
Query: 245 IAQSNR-QKQQMIMAGEFSF-YEQTWKNISSSAKQLISSLLTVDPNRRPSAQELL 297
              +NR Q  +M+  G  S    +   N     K+L++  L    + RPS   +L
Sbjct: 214 SNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRIL 268

>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 113/249 (45%), Gaps = 37/249 (14%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HPN+++L +V+  +  +HL+ E C    L +    Q    E    ++  Q  + +   H+
Sbjct: 61  HPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHK 120
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDYVSPEALLQD 219
            N +HRD+KPEN L     + S +K+ DFG +  + G +D       +  Y SPE L+ D
Sbjct: 121 HNCIHRDVKPENILI---TKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGD 177
Query: 220 -RITSKSDMWSLGVILYILLSGYPPFIAQSN---------------RQKQQMIMAGEF-- 261
            +     D+W++G +   LLSG P +  +S+                + QQ+    ++  
Sbjct: 178 TQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFS 237
Query: 262 ----------SFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV-----IGDS 306
                        E  + NIS  A  L+   L +DP  R + ++LL+HP+      I D 
Sbjct: 238 GVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIREIEDL 297
Query: 307 AKEEEMDAE 315
           AKE +  AE
Sbjct: 298 AKEHDKPAE 306

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score = 87.8 bits (216), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 102/204 (50%), Gaps = 10/204 (4%)
Query: 89  LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVI 148
           +V ++++  +   P +  L+  ++  + ++ ++E  +GG+L   I    ++ E  A    
Sbjct: 67  MVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYA 126
Query: 149 RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVG--LFG 206
            +I+ GL  LH+  I++RDLK +N +   D E   +KI DFG+   E   D V      G
Sbjct: 127 AEISIGLFFLHKRGIIYRDLKLDNVML--DSEGH-IKIADFGMCK-EHMMDGVTTREFCG 182
Query: 207 SIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQ 266
           + DY++PE +         D W+ GV+LY +L+G PPF  +   +  Q IM    S+   
Sbjct: 183 TPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYP-- 240
Query: 267 TWKNISSSAKQLISSLLTVDPNRR 290
             K++S  A  +   L+T  P +R
Sbjct: 241 --KSLSKEAVSICKGLMTKHPAKR 262

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 87.8 bits (216), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 108/229 (47%), Gaps = 13/229 (5%)
Query: 102 PNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQA 161
           P V   Y  Y     + +I+E   GG   D ++      E   A ++R+I +GL  LH  
Sbjct: 65  PYVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSE 123
Query: 162 NIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVG---LFGSIDYVSPEALLQ 218
             +HRD+K  N L     E   +K+ DFG++     TD  +      G+  +++PE + Q
Sbjct: 124 KKIHRDIKAANVLL---SEHGEVKLADFGVAG--QLTDTQIKRNTFVGTPFWMAPEVIKQ 178
Query: 219 DRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQL 278
               SK+D+WSLG+    L  G PP    S     +++     +       N S   K+ 
Sbjct: 179 SAYDSKADIWSLGITAIELARGEPP---HSELHPMKVLFLIPKNNPPTLEGNYSKPLKEF 235
Query: 279 ISSLLTVDPNRRPSAQELLNHPWVIGDSAKEEEMDAEIVSRLQSFNARR 327
           + + L  +P+ RP+A+ELL H +++ ++ K   +  E++ R + + A +
Sbjct: 236 VEACLNKEPSFRPTAKELLKHKFILRNAKKTSYL-TELIDRYKRWKAEQ 283

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 87.8 bits (216), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 107/227 (47%), Gaps = 9/227 (3%)
Query: 102 PNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQA 161
           P V   Y  Y     + +I+E   GG   D ++      E   A ++R+I +GL  LH  
Sbjct: 65  PYVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSE 123
Query: 162 NIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF-GSIDYVSPEALLQDR 220
             +HRD+K  N L     E   +K+ DFG++     T      F G+  +++PE + Q  
Sbjct: 124 KKIHRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSA 180
Query: 221 ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLIS 280
             SK+D+WSLG+    L  G PP    S     +++     +       N S   K+ + 
Sbjct: 181 YDSKADIWSLGITAIELARGEPP---HSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVE 237
Query: 281 SLLTVDPNRRPSAQELLNHPWVIGDSAKEEEMDAEIVSRLQSFNARR 327
           + L  +P+ RP+A+ELL H +++ ++ K   +  E++ R + + A +
Sbjct: 238 ACLNKEPSFRPTAKELLKHKFILRNAKKTSYL-TELIDRYKRWKAEQ 283

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 107/227 (47%), Gaps = 9/227 (3%)
Query: 102 PNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQA 161
           P V   Y  Y     + +I+E   GG   D ++      E   A ++R+I +GL  LH  
Sbjct: 80  PYVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSE 138
Query: 162 NIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF-GSIDYVSPEALLQDR 220
             +HRD+K  N L     E   +K+ DFG++     T      F G+  +++PE + Q  
Sbjct: 139 KKIHRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSA 195
Query: 221 ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLIS 280
             SK+D+WSLG+    L  G PP    S     +++     +       N S   K+ + 
Sbjct: 196 YDSKADIWSLGITAIELARGEPP---HSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVE 252
Query: 281 SLLTVDPNRRPSAQELLNHPWVIGDSAKEEEMDAEIVSRLQSFNARR 327
           + L  +P+ RP+A+ELL H +++ ++ K   +  E++ R + + A +
Sbjct: 253 ACLNKEPSFRPTAKELLKHKFILRNAKKTSYL-TELIDRYKRWKAEQ 298

>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For Catalysis And Regulation Of Non-conventional Splicing Length = 434

Iteration: 1
 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 120/252 (47%), Gaps = 38/252 (15%)
Query: 93  KIVENVSPHPNVIDLYDVYEDQNGVHLILELCS--------GGELFDRIVAQERYMEVGA 144
           K++     HPNVI  Y        +++ LELC+           + D  +  ++  E   
Sbjct: 60  KLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQK--EYNP 117
Query: 145 AAVIRQIAEGLAALHQANIVHRDLKPENCL------FLNDR----EDSPLKIMDFGL--- 191
            +++RQIA G+A LH   I+HRDLKP+N L      F  D+    E+  + I DFGL   
Sbjct: 118 ISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKK 177
Query: 192 --SSVEGYTDPVVGLFGSIDYVSPEAL-------LQDRITSKSDMWSLGVILYILLS-GY 241
             S    +   +    G+  + +PE L        + R+T   D++S+G + Y +LS G 
Sbjct: 178 LDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGK 237
Query: 242 PPFIAQSNRQKQQMIMAGEFSFYEQTW---KNISSSAKQLISSLLTVDPNRRPSAQELLN 298
            PF  + +R+    I+ G FS  E      +++ + A  LIS ++  DP +RP+A ++L 
Sbjct: 238 HPFGDKYSRESN--IIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295
Query: 299 HPWVIGDSAKEE 310
           HP     S K E
Sbjct: 296 HPLFWPKSKKLE 307

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 112/235 (47%), Gaps = 43/235 (18%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQER--YMEVGAAAVIRQIAEGLAAL 158
           HPN++ L DV   +  + L+ E         +++ + +    +      + Q+  G+A  
Sbjct: 78  HPNIVSLIDVIHSERCLTLVFEFMEKD--LKKVLDENKTGLQDSQIKIYLYQLLRGVAHC 135
Query: 159 HQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS-----SVEGYTDPVVGLFGSIDYVSP 213
           HQ  I+HRDLKP+N L      D  LK+ DFGL+      V  YT  VV L+    Y +P
Sbjct: 136 HQHRILHRDLKPQNLLI---NSDGALKLADFGLARAFGIPVRSYTHEVVTLW----YRAP 188
Query: 214 EALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSN-------------------RQKQ 253
           + L+  +  S S D+WS+G I   +++G P F   ++                    Q Q
Sbjct: 189 DVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQ 248
Query: 254 QMIMAGEFSFY---EQTWKNISSSAKQ----LISSLLTVDPNRRPSAQELLNHPW 301
           ++ +  + +F    ++ W +I     Q    L+S++L  DPN+R SA++ +NHP+
Sbjct: 249 ELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPY 303

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/319 (27%), Positives = 150/319 (47%), Gaps = 62/319 (19%)
Query: 2   GQETRKLTDEYEVTDIL-----GRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGF 56
           GQ       E E ++++     G G F  V +G  K  G+   VA+K L+ +        
Sbjct: 23  GQRDSSYYWEIEASEVMLSTRIGSGSFGTVYKG--KWHGD---VAVKILKVVD------- 70
Query: 57  PXXXXXXXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNG 116
                          PT +Q         NE+ V+RK     + H N++ L+  Y  ++ 
Sbjct: 71  ---------------PTPEQFQA----FRNEVAVLRK-----TRHVNIL-LFMGYMTKDN 105
Query: 117 VHLILELCSGGELFDRIVAQE-RYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLF 175
           + ++ + C G  L+  +  QE ++       + RQ A+G+  LH  NI+HRD+K  N +F
Sbjct: 106 LAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNN-IF 164
Query: 176 LNDREDSPLKIMDFGLSSVEGY---TDPVVGLFGSIDYVSPEAL-LQDR--ITSKSDMWS 229
           L+  E   +KI DFGL++V+     +  V    GS+ +++PE + +QD    + +SD++S
Sbjct: 165 LH--EGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYS 222
Query: 230 LGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSF---YEQTWKNISSSAKQLISSLLTVD 286
            G++LY L++G  P+   +NR  Q + M G         + +KN   + K+L++  +   
Sbjct: 223 YGIVLYELMTGELPYSHINNRD-QIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKV 281
Query: 287 PNRRP------SAQELLNH 299
              RP      S+ ELL H
Sbjct: 282 KEERPLFPQILSSIELLQH 300

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 112/235 (47%), Gaps = 43/235 (18%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQER--YMEVGAAAVIRQIAEGLAAL 158
           HPN++ L DV   +  + L+ E         +++ + +    +      + Q+  G+A  
Sbjct: 78  HPNIVSLIDVIHSERCLTLVFEFMEKD--LKKVLDENKTGLQDSQIKIYLYQLLRGVAHC 135
Query: 159 HQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS-----SVEGYTDPVVGLFGSIDYVSP 213
           HQ  I+HRDLKP+N L      D  LK+ DFGL+      V  YT  VV L+    Y +P
Sbjct: 136 HQHRILHRDLKPQNLLI---NSDGALKLADFGLARAFGIPVRSYTHEVVTLW----YRAP 188
Query: 214 EALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSN-------------------RQKQ 253
           + L+  +  S S D+WS+G I   +++G P F   ++                    Q Q
Sbjct: 189 DVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQ 248
Query: 254 QMIMAGEFSFY---EQTWKNISSSAKQ----LISSLLTVDPNRRPSAQELLNHPW 301
           ++ +  + +F    ++ W +I     Q    L+S++L  DPN+R SA++ +NHP+
Sbjct: 249 ELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPY 303

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 112/240 (46%), Gaps = 17/240 (7%)
Query: 73  TRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDR 132
           T K+ S+S+     E  VM K+      HP ++ LY V  +Q  + L+ E    G L D 
Sbjct: 58  TIKEGSMSEDDFIEEAEVMMKL-----SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY 112
Query: 133 IVAQERYMEVGAA-AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGL 191
           +  Q           +   + EG+A L +A ++HRDL   NCL     E+  +K+ DFG+
Sbjct: 113 LRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV---GENQVIKVSDFGM 169
Query: 192 SSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQ 247
           +     + YT      F  + + SPE     R +SKSD+WS GV+++ + S G  P+  +
Sbjct: 170 TRFVLDDQYTSSTGTKF-PVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR 228
Query: 248 SNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSA 307
           SN +  + I  G F  Y+   +  S+   Q+++      P  RP+   LL     I +S 
Sbjct: 229 SNSEVVEDISTG-FRLYKP--RLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAESG 285

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 86.7 bits (213), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 86/309 (27%), Positives = 147/309 (47%), Gaps = 56/309 (18%)
Query: 5   TRKLTDEYEVTD-------ILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFP 57
           +R  +D++E+ D        +G G F  V +G  K  G+   VA+K L            
Sbjct: 12  SRDSSDDWEIPDGQITVGQRIGSGSFGTVYKG--KWHGD---VAVKMLNVTA-------- 58
Query: 58  XXXXXXXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGV 117
                         PT +Q+        NE+ V+RK     + H N++ L+  Y  +  +
Sbjct: 59  --------------PTPQQLQA----FKNEVGVLRK-----TRHVNIL-LFMGYSTKPQL 94
Query: 118 HLILELCSGGELFDRIVAQERYMEVGAAA-VIRQIAEGLAALHQANIVHRDLKPENCLFL 176
            ++ + C G  L+  + A E   E+     + RQ A G+  LH  +I+HRDLK  N +FL
Sbjct: 95  AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNN-IFL 153
Query: 177 NDREDSPLKIMDFGLSSVEGY---TDPVVGLFGSIDYVSPEAL-LQDR--ITSKSDMWSL 230
           +  ED+ +KI DFGL++ +     +     L GSI +++PE + +QD    + +SD+++ 
Sbjct: 154 H--EDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAF 211
Query: 231 GVILYILLSGYPPFIAQSNR-QKQQMIMAGEFSF-YEQTWKNISSSAKQLISSLLTVDPN 288
           G++LY L++G  P+   +NR Q  +M+  G  S    +   N     K+L++  L    +
Sbjct: 212 GIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRD 271
Query: 289 RRPSAQELL 297
            RPS   +L
Sbjct: 272 ERPSFPRIL 280

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score = 86.7 bits (213), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 84/334 (25%), Positives = 145/334 (43%), Gaps = 82/334 (24%)
Query: 9   TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQI 68
           + +++  + LG G ++ V +G+ KT G         L+ +   +  G P           
Sbjct: 4   SSQFKQLEKLGNGTYATVYKGLNKTTG-----VYVALKEVKLDSEEGTP----------- 47
Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSG-- 126
                      S A+   EI +M+++      H N++ LYDV   +N + L+ E      
Sbjct: 48  -----------STAI--REISLMKEL-----KHENIVRLYDVIHTENKLTLVFEFMDNDL 89
Query: 127 -GELFDRIVAQE-RYMEVGAAAVIR-QIAEGLAALHQANIVHRDLKPENCLFLNDREDSP 183
              +  R V    R +E+      + Q+ +GLA  H+  I+HRDLKP+N L +N R    
Sbjct: 90  KKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQN-LLINKR--GQ 146
Query: 184 LKIMDFGLSSVEG-----YTDPVVGLFGSIDYVSPEALLQDRITSKS-DMWSLGVILYIL 237
           LK+ DFGL+   G     ++  VV L+    Y +P+ L+  R  S S D+WS G IL  +
Sbjct: 147 LKLGDFGLARAFGIPVNTFSSEVVTLW----YRAPDVLMGSRTYSTSIDIWSCGCILAEM 202
Query: 238 LSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAK--------------------- 276
           ++G P F   ++ ++ ++I     +  E  W +++   K                     
Sbjct: 203 ITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHT 262
Query: 277 ---------QLISSLLTVDPNRRPSAQELLNHPW 301
                      +  LL ++P+ R SA++ L+HPW
Sbjct: 263 KEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPW 296

>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin Length = 434

Iteration: 1
 Score = 86.7 bits (213), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 120/252 (47%), Gaps = 38/252 (15%)
Query: 93  KIVENVSPHPNVIDLYDVYEDQNGVHLILELCS--------GGELFDRIVAQERYMEVGA 144
           K++     HPNVI  Y        +++ LELC+           + D  +  ++  E   
Sbjct: 60  KLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQK--EYNP 117
Query: 145 AAVIRQIAEGLAALHQANIVHRDLKPENCL------FLNDR----EDSPLKIMDFGL--- 191
            +++RQIA G+A LH   I+HRDLKP+N L      F  D+    E+  + I DFGL   
Sbjct: 118 ISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKK 177
Query: 192 --SSVEGYTDPVVGLFGSIDYVSPEAL-------LQDRITSKSDMWSLGVILYILLS-GY 241
             S    +   +    G+  + +PE L        + R+T   D++S+G + Y +LS G 
Sbjct: 178 LDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGK 237
Query: 242 PPFIAQSNRQKQQMIMAGEFSFYEQTW---KNISSSAKQLISSLLTVDPNRRPSAQELLN 298
            PF  + +R+    I+ G FS  E      +++ + A  LIS ++  DP +RP+A ++L 
Sbjct: 238 HPFGDKYSRESN--IIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295
Query: 299 HPWVIGDSAKEE 310
           HP     S K E
Sbjct: 296 HPLFWPKSKKLE 307

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 86.3 bits (212), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 111/252 (44%), Gaps = 47/252 (18%)
Query: 7   KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXX 66
            L+D YE+ +ILG GG S V   + +   +   VA+K LR   +  P             
Sbjct: 9   HLSDRYELGEILGFGGMSEVH--LARDLRDHRDVAVKVLRADLARDP------------- 53
Query: 67  QIGFFPTRKQVSVSDALLTNEILVMRKIVENVSP--HPNVIDLYDVYEDQNGV----HLI 120
              F+                 L  R+  +N +   HP ++ +YD  E +       +++
Sbjct: 54  --SFY-----------------LRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIV 94
Query: 121 LELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRE 180
           +E   G  L D +  +       A  VI    + L   HQ  I+HRD+KP N +      
Sbjct: 95  MEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMI---SA 151
Query: 181 DSPLKIMDFGLSSVEGYTDPVV----GLFGSIDYVSPEALLQDRITSKSDMWSLGVILYI 236
            + +K+MDFG++     +   V     + G+  Y+SPE    D + ++SD++SLG +LY 
Sbjct: 152 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYE 211
Query: 237 LLSGYPPFIAQS 248
           +L+G PPF   S
Sbjct: 212 VLTGEPPFTGDS 223

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 85.9 bits (211), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 112/240 (46%), Gaps = 17/240 (7%)
Query: 73  TRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDR 132
           T ++ ++S+     E  VM K+      HP ++ LY V  +Q  + L+ E    G L D 
Sbjct: 38  TIREGAMSEEDFIEEAEVMMKL-----SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY 92
Query: 133 IVAQERYMEVGAA-AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGL 191
           +  Q           +   + EG+A L +A+++HRDL   NCL     E+  +K+ DFG+
Sbjct: 93  LRTQRGLFAAETLLGMCLDVCEGMAYLEEASVIHRDLAARNCLV---GENQVIKVSDFGM 149
Query: 192 SSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQ 247
           +     + YT      F  + + SPE     R +SKSD+WS GV+++ + S G  P+  +
Sbjct: 150 TRFVLDDQYTSSTGTKF-PVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR 208
Query: 248 SNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSA 307
           SN +  + I  G F  Y+   +  S+   Q+++      P  RP+   LL     I  S 
Sbjct: 209 SNSEVVEDISTG-FRLYKP--RLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAAIAASG 265

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 85.9 bits (211), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 111/252 (44%), Gaps = 47/252 (18%)
Query: 7   KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXX 66
            L+D YE+ +ILG GG S V   + +   +   VA+K LR   +  P             
Sbjct: 9   HLSDRYELGEILGFGGMSEVH--LARDLRDHRDVAVKVLRADLARDP------------- 53
Query: 67  QIGFFPTRKQVSVSDALLTNEILVMRKIVENVSP--HPNVIDLYDVYEDQNGV----HLI 120
              F+                 L  R+  +N +   HP ++ +YD  E +       +++
Sbjct: 54  --SFY-----------------LRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIV 94
Query: 121 LELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRE 180
           +E   G  L D +  +       A  VI    + L   HQ  I+HRD+KP N +      
Sbjct: 95  MEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMI---SA 151
Query: 181 DSPLKIMDFGLSSVEGYTDPVV----GLFGSIDYVSPEALLQDRITSKSDMWSLGVILYI 236
            + +K+MDFG++     +   V     + G+  Y+SPE    D + ++SD++SLG +LY 
Sbjct: 152 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYE 211
Query: 237 LLSGYPPFIAQS 248
           +L+G PPF   S
Sbjct: 212 VLTGEPPFTGDS 223

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 85.9 bits (211), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 86/309 (27%), Positives = 145/309 (46%), Gaps = 56/309 (18%)
Query: 5   TRKLTDEYEVTD-------ILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFP 57
           +R   D++E+ D        +G G F  V +G  K  G+   VA+K L            
Sbjct: 12  SRDAADDWEIPDGQITVGQRIGSGSFGTVYKG--KWHGD---VAVKMLNVTA-------- 58
Query: 58  XXXXXXXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGV 117
                         PT +Q+        NE+ V+RK     + H N++ L+  Y     +
Sbjct: 59  --------------PTPQQLQA----FKNEVGVLRK-----TRHVNIL-LFMGYSTAPQL 94
Query: 118 HLILELCSGGELFDRIVAQERYMEVGAAA-VIRQIAEGLAALHQANIVHRDLKPENCLFL 176
            ++ + C G  L+  + A E   E+     + RQ A G+  LH  +I+HRDLK  N +FL
Sbjct: 95  AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNN-IFL 153
Query: 177 NDREDSPLKIMDFGLSSVEGY---TDPVVGLFGSIDYVSPEAL-LQDR--ITSKSDMWSL 230
           +  ED+ +KI DFGL++ +     +     L GSI +++PE + +QD    + +SD+++ 
Sbjct: 154 H--EDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAF 211
Query: 231 GVILYILLSGYPPFIAQSNR-QKQQMIMAGEFSF-YEQTWKNISSSAKQLISSLLTVDPN 288
           G++LY L++G  P+   +NR Q  +M+  G  S    +   N     K+L++  L    +
Sbjct: 212 GIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRD 271
Query: 289 RRPSAQELL 297
            RPS   +L
Sbjct: 272 ERPSFPRIL 280

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 85.5 bits (210), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 112/240 (46%), Gaps = 17/240 (7%)
Query: 73  TRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDR 132
           T ++ ++S+     E  VM K+      HP ++ LY V  +Q  + L+ E    G L D 
Sbjct: 38  TIREGAMSEEDFIEEAEVMMKL-----SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY 92
Query: 133 IVAQERYMEVGAA-AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGL 191
           +  Q           +   + EG+A L +A ++HRDL   NCL     E+  +K+ DFG+
Sbjct: 93  LRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV---GENQVIKVSDFGM 149
Query: 192 SSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQ 247
           +     + YT      F  + + SPE     R +SKSD+WS GV+++ + S G  P+  +
Sbjct: 150 TRFVLDDQYTSSTGTKF-PVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR 208
Query: 248 SNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSA 307
           SN +  + I  G F  Y+   +  S+   Q+++      P  RP+   LL     I +S 
Sbjct: 209 SNSEVVEDISTG-FRLYKP--RLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAESG 265

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 85.5 bits (210), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 112/240 (46%), Gaps = 17/240 (7%)
Query: 73  TRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDR 132
           T ++ ++S+     E  VM K+      HP ++ LY V  +Q  + L+ E    G L D 
Sbjct: 36  TIREGAMSEEDFIEEAEVMMKL-----SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY 90
Query: 133 IVAQERYMEVGAA-AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGL 191
           +  Q           +   + EG+A L +A ++HRDL   NCL     E+  +K+ DFG+
Sbjct: 91  LRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV---GENQVIKVSDFGM 147
Query: 192 SSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQ 247
           +     + YT      F  + + SPE     R +SKSD+WS GV+++ + S G  P+  +
Sbjct: 148 TRFVLDDQYTSSTGTKF-PVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR 206
Query: 248 SNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSA 307
           SN +  + I  G F  Y+   +  S+   Q+++      P  RP+   LL     I +S 
Sbjct: 207 SNSEVVEDISTG-FRLYKP--RLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAESG 263

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 85.5 bits (210), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 112/240 (46%), Gaps = 17/240 (7%)
Query: 73  TRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDR 132
           T ++ ++S+     E  VM K+      HP ++ LY V  +Q  + L+ E    G L D 
Sbjct: 41  TIREGAMSEEDFIEEAEVMMKL-----SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY 95
Query: 133 IVAQERYMEVGAA-AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGL 191
           +  Q           +   + EG+A L +A ++HRDL   NCL     E+  +K+ DFG+
Sbjct: 96  LRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV---GENQVIKVSDFGM 152
Query: 192 SSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQ 247
           +     + YT      F  + + SPE     R +SKSD+WS GV+++ + S G  P+  +
Sbjct: 153 TRFVLDDQYTSSTGTKF-PVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR 211
Query: 248 SNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSA 307
           SN +  + I  G F  Y+   +  S+   Q+++      P  RP+   LL     I +S 
Sbjct: 212 SNSEVVEDISTG-FRLYKP--RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAESG 268

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 85.1 bits (209), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 125/236 (52%), Gaps = 24/236 (10%)
Query: 72  PTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFD 131
           PT +Q+        NE+ V+RK     + H N++ L+  Y  +  + ++ + C G  L+ 
Sbjct: 71  PTPQQLQA----FKNEVGVLRK-----TRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYH 120
Query: 132 RI-VAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFG 190
            + + + ++  +    + RQ A+G+  LH  +I+HRDLK  N +FL+  ED  +KI DFG
Sbjct: 121 HLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNN-IFLH--EDLTVKIGDFG 177
Query: 191 LSSVEGY---TDPVVGLFGSIDYVSPEAL-LQDR--ITSKSDMWSLGVILYILLSGYPPF 244
           L++V+     +     L GSI +++PE + +QD+   + +SD+++ G++LY L++G  P+
Sbjct: 178 LATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 237
Query: 245 IAQSNRQKQQMIMAGEFSF---YEQTWKNISSSAKQLISSLLTVDPNRRPSAQELL 297
              +NR  Q + M G         +   N   + K+L++  L    + RP   ++L
Sbjct: 238 SNINNRD-QIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 292

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 85.1 bits (209), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 125/236 (52%), Gaps = 24/236 (10%)
Query: 72  PTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFD 131
           PT +Q+        NE+ V+RK     + H N++ L+  Y  +  + ++ + C G  L+ 
Sbjct: 70  PTPQQLQA----FKNEVGVLRK-----TRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYH 119
Query: 132 RI-VAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFG 190
            + + + ++  +    + RQ A+G+  LH  +I+HRDLK  N +FL+  ED  +KI DFG
Sbjct: 120 HLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNN-IFLH--EDLTVKIGDFG 176
Query: 191 LSSVEGY---TDPVVGLFGSIDYVSPEAL-LQDR--ITSKSDMWSLGVILYILLSGYPPF 244
           L++V+     +     L GSI +++PE + +QD+   + +SD+++ G++LY L++G  P+
Sbjct: 177 LATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 236
Query: 245 IAQSNRQKQQMIMAGEFSF---YEQTWKNISSSAKQLISSLLTVDPNRRPSAQELL 297
              +NR  Q + M G         +   N   + K+L++  L    + RP   ++L
Sbjct: 237 SNINNRD-QIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 291

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 97/203 (47%), Gaps = 8/203 (3%)
Query: 89  LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVI 148
           +V ++++      P +  L+  ++  + ++ ++E  +GG+L   I    R+ E  A    
Sbjct: 389 MVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYA 448
Query: 149 RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF-GS 207
            +IA GL  L    I++RDLK +N +   D E   +KI DFG+     +       F G+
Sbjct: 449 AEIAIGLFFLQSKGIIYRDLKLDNVML--DSEGH-IKIADFGMCKENIWDGVTTKXFCGT 505
Query: 208 IDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQT 267
            DY++PE +         D W+ GV+LY +L+G  PF  +   +  Q IM    ++    
Sbjct: 506 PDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYP--- 562
Query: 268 WKNISSSAKQLISSLLTVDPNRR 290
            K++S  A  +   L+T  P +R
Sbjct: 563 -KSMSKEAVAICKGLMTKHPGKR 584

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 12/210 (5%)
Query: 102 PNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQA 161
           P V   Y  Y     + +I+E   GG   D ++      E   A ++R+I +GL  LH  
Sbjct: 85  PYVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSE 143
Query: 162 NIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVG---LFGSIDYVSPEALLQ 218
             +HRD+K  N L     E   +K+ DFG++     TD  +      G+  +++PE + Q
Sbjct: 144 KKIHRDIKAANVLL---SEHGEVKLADFGVAG--QLTDTQIKRNTFVGTPFWMAPEVIKQ 198
Query: 219 DRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQL 278
               SK+D+WSLG+    L  G PP    S     +++     +       N S   K+ 
Sbjct: 199 SAYDSKADIWSLGITAIELARGEPP---HSELHPMKVLFLIPKNNPPTLEGNYSKPLKEF 255
Query: 279 ISSLLTVDPNRRPSAQELLNHPWVIGDSAK 308
           + + L  +P+ RP+A+ELL H +++ ++ K
Sbjct: 256 VEACLNKEPSFRPTAKELLKHKFILRNAKK 285

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 111/252 (44%), Gaps = 47/252 (18%)
Query: 7   KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXX 66
            L+D YE+ +ILG GG S V   + +   +   VA+K LR   +  P             
Sbjct: 9   HLSDRYELGEILGFGGMSEVH--LARDLRDHRDVAVKVLRADLARDP------------- 53
Query: 67  QIGFFPTRKQVSVSDALLTNEILVMRKIVENVSP--HPNVIDLYDVYEDQNGV----HLI 120
              F+                 L  R+  +N +   HP ++ +YD  E +       +++
Sbjct: 54  --SFY-----------------LRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIV 94
Query: 121 LELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRE 180
           +E   G  L D +  +       A  VI    + L   HQ  I+HRD+KP N L      
Sbjct: 95  MEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANILI---SA 151
Query: 181 DSPLKIMDFGLSSVEGYTDPVV----GLFGSIDYVSPEALLQDRITSKSDMWSLGVILYI 236
            + +K++DFG++     +   V     + G+  Y+SPE    D + ++SD++SLG +LY 
Sbjct: 152 TNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYE 211
Query: 237 LLSGYPPFIAQS 248
           +L+G PPF   S
Sbjct: 212 VLTGEPPFTGDS 223

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 97/203 (47%), Gaps = 8/203 (3%)
Query: 89  LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVI 148
           +V ++++      P +  L+  ++  + ++ ++E  +GG+L   I    R+ E  A    
Sbjct: 68  MVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYA 127
Query: 149 RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF-GS 207
            +IA GL  L    I++RDLK +N +   D E   +KI DFG+     +       F G+
Sbjct: 128 AEIAIGLFFLQSKGIIYRDLKLDNVML--DSEGH-IKIADFGMCKENIWDGVTTKXFCGT 184
Query: 208 IDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQT 267
            DY++PE +         D W+ GV+LY +L+G  PF  +   +  Q IM    ++    
Sbjct: 185 PDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYP--- 241
Query: 268 WKNISSSAKQLISSLLTVDPNRR 290
            K++S  A  +   L+T  P +R
Sbjct: 242 -KSMSKEAVAICKGLMTKHPGKR 263

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 106/215 (49%), Gaps = 11/215 (5%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYM-EVGAAAVIRQIAEGLAALH 159
           HPN++ L D +  +N + +++E C+GG +   ++  ER + E     V +Q  + L  LH
Sbjct: 93  HPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH 152
Query: 160 QANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF-GSIDYVSPEALL- 217
              I+HRDLK  N LF  D +   +K+ DFG+S+    T      F G+  +++PE ++ 
Sbjct: 153 DNKIIHRDLKAGNILFTLDGD---IKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMC 209
Query: 218 ---QDR-ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
              +DR    K+D+WSLG+ L  +    PP    +  +    I   E     Q     SS
Sbjct: 210 ETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQP-SRWSS 268
Query: 274 SAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAK 308
           + K  +   L  + + R +  +LL HP+V  DS K
Sbjct: 269 NFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNK 303

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 125/236 (52%), Gaps = 24/236 (10%)
Query: 72  PTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFD 131
           PT +Q+        NE+ V+RK     + H N++ L+  Y  +  + ++ + C G  L+ 
Sbjct: 48  PTPQQLQA----FKNEVGVLRK-----TRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYH 97
Query: 132 RI-VAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFG 190
            + + + ++  +    + RQ A+G+  LH  +I+HRDLK  N +FL+  ED  +KI DFG
Sbjct: 98  HLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNN-IFLH--EDLTVKIGDFG 154
Query: 191 LSSVEGY---TDPVVGLFGSIDYVSPEAL-LQDR--ITSKSDMWSLGVILYILLSGYPPF 244
           L++V+     +     L GSI +++PE + +QD+   + +SD+++ G++LY L++G  P+
Sbjct: 155 LATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 214
Query: 245 IAQSNRQKQQMIMAGEFSF---YEQTWKNISSSAKQLISSLLTVDPNRRPSAQELL 297
              +NR  Q + M G         +   N   + K+L++  L    + RP   ++L
Sbjct: 215 SNINNRD-QIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 269

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 125/236 (52%), Gaps = 24/236 (10%)
Query: 72  PTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFD 131
           PT +Q+        NE+ V+RK     + H N++ L+  Y  +  + ++ + C G  L+ 
Sbjct: 48  PTPQQLQA----FKNEVGVLRK-----TRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYH 97
Query: 132 RI-VAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFG 190
            + + + ++  +    + RQ A+G+  LH  +I+HRDLK  N +FL+  ED  +KI DFG
Sbjct: 98  HLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNN-IFLH--EDLTVKIGDFG 154
Query: 191 LSSVEGY---TDPVVGLFGSIDYVSPEAL-LQDR--ITSKSDMWSLGVILYILLSGYPPF 244
           L++V+     +     L GSI +++PE + +QD+   + +SD+++ G++LY L++G  P+
Sbjct: 155 LATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 214
Query: 245 IAQSNRQKQQMIMAGEFSF---YEQTWKNISSSAKQLISSLLTVDPNRRPSAQELL 297
              +NR  Q + M G         +   N   + K+L++  L    + RP   ++L
Sbjct: 215 SNINNRD-QIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 269

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 125/236 (52%), Gaps = 24/236 (10%)
Query: 72  PTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFD 131
           PT +Q+        NE+ V+RK     + H N++ L+  Y  +  + ++ + C G  L+ 
Sbjct: 45  PTPQQLQA----FKNEVGVLRK-----TRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYH 94
Query: 132 RI-VAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFG 190
            + + + ++  +    + RQ A+G+  LH  +I+HRDLK  N +FL+  ED  +KI DFG
Sbjct: 95  HLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNN-IFLH--EDLTVKIGDFG 151
Query: 191 LSSVEGY---TDPVVGLFGSIDYVSPEAL-LQDR--ITSKSDMWSLGVILYILLSGYPPF 244
           L++V+     +     L GSI +++PE + +QD+   + +SD+++ G++LY L++G  P+
Sbjct: 152 LATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 211
Query: 245 IAQSNRQKQQMIMAGEFSF---YEQTWKNISSSAKQLISSLLTVDPNRRPSAQELL 297
              +NR  Q + M G         +   N   + K+L++  L    + RP   ++L
Sbjct: 212 SNINNRD-QIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 266

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 115/249 (46%), Gaps = 15/249 (6%)
Query: 67  QIGFFPTRKQVSVS---DALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILEL 123
            +G++  + +V++    +  ++ E  +    V     HP ++ LY V  +Q  + L+ E 
Sbjct: 25  HLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEF 84
Query: 124 CSGGELFDRIVAQERYMEVGAA-AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDS 182
              G L D +  Q           +   + EG+A L +A ++HRDL   NCL     E+ 
Sbjct: 85  MEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV---GENQ 141
Query: 183 PLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS 239
            +K+ DFG++     + YT      F  + + SPE     R +SKSD+WS GV+++ + S
Sbjct: 142 VIKVSDFGMTRFVLDDQYTSSTGTKF-PVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 200
Query: 240 -GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN 298
            G  P+  +SN +  + I  G F  Y+   +  S+   Q+++      P  RP+   LL 
Sbjct: 201 EGKIPYENRSNSEVVEDISTG-FRLYKP--RLASTHVYQIMNHCWRERPEDRPAFSRLLR 257
Query: 299 HPWVIGDSA 307
               I +S 
Sbjct: 258 QLAEIAESG 266

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 125/236 (52%), Gaps = 24/236 (10%)
Query: 72  PTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFD 131
           PT +Q+        NE+ V+RK     + H N++ L+  Y  +  + ++ + C G  L+ 
Sbjct: 43  PTPQQLQA----FKNEVGVLRK-----TRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYH 92
Query: 132 RI-VAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFG 190
            + + + ++  +    + RQ A+G+  LH  +I+HRDLK  N +FL+  ED  +KI DFG
Sbjct: 93  HLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNN-IFLH--EDLTVKIGDFG 149
Query: 191 LSSVEGY---TDPVVGLFGSIDYVSPEAL-LQDR--ITSKSDMWSLGVILYILLSGYPPF 244
           L++V+     +     L GSI +++PE + +QD+   + +SD+++ G++LY L++G  P+
Sbjct: 150 LATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
Query: 245 IAQSNRQKQQMIMAGEFSF---YEQTWKNISSSAKQLISSLLTVDPNRRPSAQELL 297
              +NR  Q + M G         +   N   + K+L++  L    + RP   ++L
Sbjct: 210 SNINNRD-QIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 264

>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 87/304 (28%), Positives = 140/304 (46%), Gaps = 44/304 (14%)
Query: 2   GQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXX 61
           G+E   L  +Y+V  +LG GG   V  GI+ +  +   VAIK + +              
Sbjct: 43  GKEKEPLESQYQVGPLLGSGGSGSVYSGIRVS--DNLPVAIKHVEK-------------- 86
Query: 62  XXXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLIL 121
                  G  P   +V +       E+++++K+    S    VI L D +E  +   LIL
Sbjct: 87  -DRISDWGELPNGTRVPM-------EVVLLKKVSSGFS---GVIRLLDWFERPDSFVLIL 135
Query: 122 ELCSG-GELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRE 180
           E      +LFD I  +    E  A +   Q+ E +   H   ++HRD+K EN L   D  
Sbjct: 136 ERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI--DLN 193
Query: 181 DSPLKIMDFGLSSVEGYTDPVVGLF-GSIDYVSPEALLQDRITSKS-DMWSLGVILYILL 238
              LK++DFG  ++    D V   F G+  Y  PE +   R   +S  +WSLG++LY ++
Sbjct: 194 RGELKLIDFGSGAL--LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 251
Query: 239 SGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN 298
            G  PF      +  + I+ G+  F ++    +SS  + LI   L + P+ RP+ +E+ N
Sbjct: 252 CGDIPF------EHDEEIIRGQVFFRQR----VSSECQHLIRWCLALRPSDRPTFEEIQN 301
Query: 299 HPWV 302
           HPW+
Sbjct: 302 HPWM 305

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 110/252 (43%), Gaps = 47/252 (18%)
Query: 7   KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXX 66
            L+D YE+ +ILG GG S V   + +       VA+K LR   +  P             
Sbjct: 9   HLSDRYELGEILGFGGMSEVH--LARDLRLHRDVAVKVLRADLARDP------------- 53
Query: 67  QIGFFPTRKQVSVSDALLTNEILVMRKIVENVSP--HPNVIDLYDVYEDQNGV----HLI 120
              F+                 L  R+  +N +   HP ++ +YD  E +       +++
Sbjct: 54  --SFY-----------------LRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIV 94
Query: 121 LELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRE 180
           +E   G  L D +  +       A  VI    + L   HQ  I+HRD+KP N +      
Sbjct: 95  MEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMI---SA 151
Query: 181 DSPLKIMDFGLSSVEGYTDPVV----GLFGSIDYVSPEALLQDRITSKSDMWSLGVILYI 236
            + +K+MDFG++     +   V     + G+  Y+SPE    D + ++SD++SLG +LY 
Sbjct: 152 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYE 211
Query: 237 LLSGYPPFIAQS 248
           +L+G PPF   S
Sbjct: 212 VLTGEPPFTGDS 223

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 9/203 (4%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAV---IRQIAEGLAA 157
           H N++     + +   + + +E   GG L   + ++   ++     +    +QI EGL  
Sbjct: 78  HKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKY 137
Query: 158 LHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF-GSIDYVSPEAL 216
           LH   IVHRD+K +N L   +     LKI DFG S      +P    F G++ Y++PE +
Sbjct: 138 LHDNQIVHRDIKGDNVLI--NTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEII 195
Query: 217 LQDR--ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSS 274
            +        +D+WSLG  +  + +G PPF      Q   M   G F  + +  +++S+ 
Sbjct: 196 DKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQ-AAMFKVGMFKVHPEIPESMSAE 254
Query: 275 AKQLISSLLTVDPNRRPSAQELL 297
           AK  I      DP++R  A +LL
Sbjct: 255 AKAFILKCFEPDPDKRACANDLL 277

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 83.6 bits (205), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 110/252 (43%), Gaps = 47/252 (18%)
Query: 7   KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXX 66
            L+D YE+ +ILG GG S V   + +       VA+K LR   +  P             
Sbjct: 26  HLSDRYELGEILGFGGMSEVH--LARDLRLHRDVAVKVLRADLARDP------------- 70
Query: 67  QIGFFPTRKQVSVSDALLTNEILVMRKIVENVSP--HPNVIDLYDVYEDQNGV----HLI 120
              F+                 L  R+  +N +   HP ++ +YD  E +       +++
Sbjct: 71  --SFY-----------------LRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIV 111
Query: 121 LELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRE 180
           +E   G  L D +  +       A  VI    + L   HQ  I+HRD+KP N +      
Sbjct: 112 MEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMI---SA 168
Query: 181 DSPLKIMDFGLSSVEGYTDPVV----GLFGSIDYVSPEALLQDRITSKSDMWSLGVILYI 236
            + +K+MDFG++     +   V     + G+  Y+SPE    D + ++SD++SLG +LY 
Sbjct: 169 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYE 228
Query: 237 LLSGYPPFIAQS 248
           +L+G PPF   S
Sbjct: 229 VLTGEPPFTGDS 240

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 83.6 bits (205), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 124/236 (52%), Gaps = 24/236 (10%)
Query: 72  PTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFD 131
           PT +Q+        NE+ V+RK     + H N++ L+  Y     + ++ + C G  L+ 
Sbjct: 43  PTPQQLQA----FKNEVGVLRK-----TRHVNIL-LFMGYSTAPQLAIVTQWCEGSSLYH 92
Query: 132 RI-VAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFG 190
            + + + ++  +    + RQ A+G+  LH  +I+HRDLK  N +FL+  ED  +KI DFG
Sbjct: 93  HLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNN-IFLH--EDLTVKIGDFG 149
Query: 191 LSSVEGY---TDPVVGLFGSIDYVSPEAL-LQDR--ITSKSDMWSLGVILYILLSGYPPF 244
           L++V+     +     L GSI +++PE + +QD+   + +SD+++ G++LY L++G  P+
Sbjct: 150 LATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
Query: 245 IAQSNRQKQQMIMAGEFSF---YEQTWKNISSSAKQLISSLLTVDPNRRPSAQELL 297
              +NR  Q + M G         +   N   + K+L++  L    + RP   ++L
Sbjct: 210 SNINNRD-QIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 264

>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415

Iteration: 1
 Score = 83.2 bits (204), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 82/321 (25%), Positives = 134/321 (41%), Gaps = 50/321 (15%)
Query: 3   QETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXX 62
           ++ R   ++YEV  ++GRG F           GE   V  K+ R++ +            
Sbjct: 67  RDLRMKAEDYEVVKVIGRGAF-----------GEVQLVRHKSTRKVYA------------ 103
Query: 63  XXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILE 122
                +      + +  SD+    E     + +   +  P V+ L+  ++D   +++++E
Sbjct: 104 -----MKLLSKFEMIKRSDSAFFWE----ERDIMAFANSPWVVQLFYAFQDDRYLYMVME 154
Query: 123 LCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDS 182
              GG+L + +++     E  A     ++   L A+H    +HRD+KP+N L     +  
Sbjct: 155 YMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL---DKSG 210
Query: 183 PLKIMDFGLS---SVEGYT--DPVVGLFGSIDYVSPEALLQD----RITSKSDMWSLGVI 233
            LK+ DFG     + EG    D  VG   + DY+SPE L           + D WS+GV 
Sbjct: 211 HLKLADFGTCMKMNKEGMVRCDTAVG---TPDYISPEVLKSQGGDGYYGRECDWWSVGVF 267
Query: 234 LYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNR--RP 291
           LY +L G  PF A S       IM  + S       +IS  AK LI + LT    R  R 
Sbjct: 268 LYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRN 327
Query: 292 SAQELLNHPWVIGDSAKEEEM 312
             +E+  H +   D    E +
Sbjct: 328 GVEEIKRHLFFKNDQWAWETL 348

>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410

Iteration: 1
 Score = 83.2 bits (204), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 82/321 (25%), Positives = 134/321 (41%), Gaps = 50/321 (15%)
Query: 3   QETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXX 62
           ++ R   ++YEV  ++GRG F           GE   V  K+ R++ +            
Sbjct: 62  RDLRMKAEDYEVVKVIGRGAF-----------GEVQLVRHKSTRKVYA------------ 98
Query: 63  XXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILE 122
                +      + +  SD+    E     + +   +  P V+ L+  ++D   +++++E
Sbjct: 99  -----MKLLSKFEMIKRSDSAFFWE----ERDIMAFANSPWVVQLFYAFQDDRYLYMVME 149
Query: 123 LCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDS 182
              GG+L + +++     E  A     ++   L A+H    +HRD+KP+N L     +  
Sbjct: 150 YMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL---DKSG 205
Query: 183 PLKIMDFGLS---SVEGYT--DPVVGLFGSIDYVSPEALLQD----RITSKSDMWSLGVI 233
            LK+ DFG     + EG    D  VG   + DY+SPE L           + D WS+GV 
Sbjct: 206 HLKLADFGTCMKMNKEGMVRCDTAVG---TPDYISPEVLKSQGGDGYYGRECDWWSVGVF 262
Query: 234 LYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNR--RP 291
           LY +L G  PF A S       IM  + S       +IS  AK LI + LT    R  R 
Sbjct: 263 LYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRN 322
Query: 292 SAQELLNHPWVIGDSAKEEEM 312
             +E+  H +   D    E +
Sbjct: 323 GVEEIKRHLFFKNDQWAWETL 343

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 83.2 bits (204), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 94/203 (46%), Gaps = 9/203 (4%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYM---EVGAAAVIRQIAEGLAA 157
           H N++     + +   + + +E   GG L   + ++   +   E       +QI EGL  
Sbjct: 64  HKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKY 123
Query: 158 LHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF-GSIDYVSPEAL 216
           LH   IVHRD+K +N L   +     LKI DFG S      +P    F G++ Y++PE +
Sbjct: 124 LHDNQIVHRDIKGDNVLI--NTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEII 181
Query: 217 LQD--RITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSS 274
            +        +D+WSLG  +  + +G PPF      Q   M   G F  + +  +++S+ 
Sbjct: 182 DKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQ-AAMFKVGMFKVHPEIPESMSAE 240
Query: 275 AKQLISSLLTVDPNRRPSAQELL 297
           AK  I      DP++R  A +LL
Sbjct: 241 AKAFILKCFEPDPDKRACANDLL 263

>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406

Iteration: 1
 Score = 83.2 bits (204), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 82/321 (25%), Positives = 134/321 (41%), Gaps = 50/321 (15%)
Query: 3   QETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXX 62
           ++ R   ++YEV  ++GRG F           GE   V  K+ R++ +            
Sbjct: 67  RDLRMKAEDYEVVKVIGRGAF-----------GEVQLVRHKSTRKVYA------------ 103
Query: 63  XXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILE 122
                +      + +  SD+    E     + +   +  P V+ L+  ++D   +++++E
Sbjct: 104 -----MKLLSKFEMIKRSDSAFFWE----ERDIMAFANSPWVVQLFYAFQDDRYLYMVME 154
Query: 123 LCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDS 182
              GG+L + +++     E  A     ++   L A+H    +HRD+KP+N L     +  
Sbjct: 155 YMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL---DKSG 210
Query: 183 PLKIMDFGLS---SVEGYT--DPVVGLFGSIDYVSPEALLQD----RITSKSDMWSLGVI 233
            LK+ DFG     + EG    D  VG   + DY+SPE L           + D WS+GV 
Sbjct: 211 HLKLADFGTCMKMNKEGMVRCDTAVG---TPDYISPEVLKSQGGDGYYGRECDWWSVGVF 267
Query: 234 LYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNR--RP 291
           LY +L G  PF A S       IM  + S       +IS  AK LI + LT    R  R 
Sbjct: 268 LYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRN 327
Query: 292 SAQELLNHPWVIGDSAKEEEM 312
             +E+  H +   D    E +
Sbjct: 328 GVEEIKRHLFFKNDQWAWETL 348

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 83.2 bits (204), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 114/251 (45%), Gaps = 26/251 (10%)
Query: 94  IVENVSPHPNVIDLYDVYEDQN------GVHLILELCSGGELFDRI--VAQERYMEVGAA 145
           +++  S H N+   Y  +  +N       + L++E C  G + D I         E   A
Sbjct: 73  MLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIA 132
Query: 146 AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVG-- 203
            + R+I  GL+ LHQ  ++HRD+K +N L     E++ +K++DFG+S+     D  VG  
Sbjct: 133 YICREILRGLSHLHQHKVIHRDIKGQNVLLT---ENAEVKLVDFGVSA---QLDRTVGRR 186
Query: 204 --LFGSIDYVSPEALLQDRITS-----KSDMWSLGVILYILLSGYPPFIAQSNRQKQQMI 256
               G+  +++PE +  D         KSD+WSLG+    +  G PP       +   +I
Sbjct: 187 NTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI 246
Query: 257 MAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAKEEEMDAEI 316
                   +   K  S   +  I S L  + ++RP+ ++L+ HP+ I D   E ++  ++
Sbjct: 247 PRNPAPRLKS--KKWSKKFQSFIESCLVKNHSQRPATEQLMKHPF-IRDQPNERQVRIQL 303
Query: 317 VSRLQSFNARR 327
              +     +R
Sbjct: 304 KDHIDRTKKKR 314

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 83.2 bits (204), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 105/215 (48%), Gaps = 11/215 (5%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYM-EVGAAAVIRQIAEGLAALH 159
           HPN++ L D +  +N + +++E C+GG +   ++  ER + E     V +Q  + L  LH
Sbjct: 93  HPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH 152
Query: 160 QANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF-GSIDYVSPEALL- 217
              I+HRDLK  N LF  D +   +K+ DFG+S+           F G+  +++PE ++ 
Sbjct: 153 DNKIIHRDLKAGNILFTLDGD---IKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMC 209
Query: 218 ---QDR-ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
              +DR    K+D+WSLG+ L  +    PP    +  +    I   E     Q     SS
Sbjct: 210 ETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQP-SRWSS 268
Query: 274 SAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAK 308
           + K  +   L  + + R +  +LL HP+V  DS K
Sbjct: 269 NFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNK 303

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score = 83.2 bits (204), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 114/234 (48%), Gaps = 42/234 (17%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSG--GELFDRIVAQERYMEVGAAAVIRQIAEGLAAL 158
           H N++ LYDV   +  + L+ E       +L D  V +     V A + + Q+  G+A  
Sbjct: 59  HSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLD--VCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 159 HQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEG-----YTDPVVGLFGSIDYVSP 213
           H   ++HRDLKP+N L   +RE   LKI DFGL+   G     YT  VV L+    Y +P
Sbjct: 117 HDRRVLHRDLKPQNLLI--NREGE-LKIADFGLARAFGIPVRKYTHEVVTLW----YRAP 169
Query: 214 EALLQDRITSKS-DMWSLGVILYILLSGYP--PFIAQSNRQKQQMIMAG----------- 259
           + L+  +  S + D+WS+G I   +++G P  P ++++++  +   + G           
Sbjct: 170 DVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVT 229
Query: 260 -------EFSFYEQ-TW----KNISSSAKQLISSLLTVDPNRRPSAQELLNHPW 301
                   F+ YE   W    K +  S   L+S +L +DPN+R +A++ L H +
Sbjct: 230 ELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAY 283

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score = 82.8 bits (203), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 114/234 (48%), Gaps = 42/234 (17%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSG--GELFDRIVAQERYMEVGAAAVIRQIAEGLAAL 158
           H N++ LYDV   +  + L+ E       +L D  V +     V A + + Q+  G+A  
Sbjct: 59  HSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLD--VCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 159 HQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEG-----YTDPVVGLFGSIDYVSP 213
           H   ++HRDLKP+N L   +RE   LKI DFGL+   G     YT  VV L+    Y +P
Sbjct: 117 HDRRVLHRDLKPQNLLI--NREGE-LKIADFGLARAFGIPVRKYTHEVVTLW----YRAP 169
Query: 214 EALLQDRITSKS-DMWSLGVILYILLSGYP--PFIAQSNRQKQQMIMAG----------- 259
           + L+  +  S + D+WS+G I   +++G P  P ++++++  +   + G           
Sbjct: 170 DVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVT 229
Query: 260 -------EFSFYEQ-TW----KNISSSAKQLISSLLTVDPNRRPSAQELLNHPW 301
                   F+ YE   W    K +  S   L+S +L +DPN+R +A++ L H +
Sbjct: 230 ELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAY 283

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 82.4 bits (202), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 78/298 (26%), Positives = 128/298 (42%), Gaps = 56/298 (18%)
Query: 11  EYEVTDI-----LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXX 65
           E E TDI     LG G +  V  G+ K    T  VA+KTL+                   
Sbjct: 10  EMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--VAVKTLKE------------------ 49
Query: 66  XQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCS 125
                          D +   E L    +++ +  HPN++ L  V   +   ++I E  +
Sbjct: 50  ---------------DTMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMT 93
Query: 126 GGELFDRIVAQERYMEVGAAAVIR---QIAEGLAALHQANIVHRDLKPENCLFLNDREDS 182
            G L D +    R  EV A  ++    QI+  +  L + N +HRDL   NCL     E+ 
Sbjct: 94  YGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENH 149
Query: 183 PLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILL 238
            +K+ DFGLS +   + YT P    F  I + +PE+L  ++ + KSD+W+ GV+L+ I  
Sbjct: 150 LVKVADFGLSRLMTGDTYTAPAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
Query: 239 SGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
            G  P+      Q  +++   E  +  +  +       +L+ +    +P+ RPS  E+
Sbjct: 209 YGMSPYPGIDLSQVYELL---EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 263

>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676

Iteration: 1
 Score = 82.4 bits (202), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 106/243 (43%), Gaps = 43/243 (17%)
Query: 12  YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFF 71
           +E+ + LG GGF  V R I +  GE  QVAIK  R+  S                     
Sbjct: 16  WEMKERLGTGGFGYVLRWIHQDTGE--QVAIKQCRQELSPK------------------- 54
Query: 72  PTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVH------LILELCS 125
             R++  +       EI +M+K+      HPNV+   +V +    +       L +E C 
Sbjct: 55  -NRERWCL-------EIQIMKKL-----NHPNVVSAREVPDGLQKLAPNDLPLLAMEYCE 101
Query: 126 GGELFDRIVAQERYMEVGAAAV---IRQIAEGLAALHQANIVHRDLKPENCLFLNDREDS 182
           GG+L   +   E    +    +   +  I+  L  LH+  I+HRDLKPEN +     +  
Sbjct: 102 GGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRL 161
Query: 183 PLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYP 242
             KI+D G +      +      G++ Y++PE L Q + T   D WS G + +  ++G+ 
Sbjct: 162 IHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFR 221
Query: 243 PFI 245
           PF+
Sbjct: 222 PFL 224

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 82.4 bits (202), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 78/298 (26%), Positives = 128/298 (42%), Gaps = 56/298 (18%)
Query: 11  EYEVTDI-----LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXX 65
           E E TDI     LG G +  V  G+ K    T  VA+KTL+                   
Sbjct: 11  EMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--VAVKTLKE------------------ 50
Query: 66  XQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCS 125
                          D +   E L    +++ +  HPN++ L  V   +   ++I E  +
Sbjct: 51  ---------------DTMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMT 94
Query: 126 GGELFDRIVAQERYMEVGAAAVIR---QIAEGLAALHQANIVHRDLKPENCLFLNDREDS 182
            G L D +    R  EV A  ++    QI+  +  L + N +HRDL   NCL     E+ 
Sbjct: 95  YGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENH 150
Query: 183 PLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILL 238
            +K+ DFGLS +   + YT P    F  I + +PE+L  ++ + KSD+W+ GV+L+ I  
Sbjct: 151 LVKVADFGLSRLMTGDTYTAPAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
Query: 239 SGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
            G  P+      Q  +++   E  +  +  +       +L+ +    +P+ RPS  E+
Sbjct: 210 YGMSPYPGIDLSQVYELL---EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 264

>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677

Iteration: 1
 Score = 82.4 bits (202), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 106/243 (43%), Gaps = 43/243 (17%)
Query: 12  YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFF 71
           +E+ + LG GGF  V R I +  GE  QVAIK  R+  S                     
Sbjct: 17  WEMKERLGTGGFGYVLRWIHQDTGE--QVAIKQCRQELSPK------------------- 55
Query: 72  PTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVH------LILELCS 125
             R++  +       EI +M+K+      HPNV+   +V +    +       L +E C 
Sbjct: 56  -NRERWCL-------EIQIMKKL-----NHPNVVSAREVPDGLQKLAPNDLPLLAMEYCE 102
Query: 126 GGELFDRIVAQERYMEVGAAAV---IRQIAEGLAALHQANIVHRDLKPENCLFLNDREDS 182
           GG+L   +   E    +    +   +  I+  L  LH+  I+HRDLKPEN +     +  
Sbjct: 103 GGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRL 162
Query: 183 PLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYP 242
             KI+D G +      +      G++ Y++PE L Q + T   D WS G + +  ++G+ 
Sbjct: 163 IHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFR 222
Query: 243 PFI 245
           PF+
Sbjct: 223 PFL 225

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 82.4 bits (202), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 124/236 (52%), Gaps = 24/236 (10%)
Query: 72  PTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFD 131
           PT +Q+        NE+ V+RK     + H N++ L+  Y  +  + ++ + C G  L+ 
Sbjct: 71  PTPQQLQA----FKNEVGVLRK-----TRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYH 120
Query: 132 RI-VAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFG 190
            + + + ++  +    + RQ A+G+  LH  +I+HRDLK  N +FL+  ED  +KI DFG
Sbjct: 121 HLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNN-IFLH--EDLTVKIGDFG 177
Query: 191 LSSVEGY---TDPVVGLFGSIDYVSPEAL-LQDR--ITSKSDMWSLGVILYILLSGYPPF 244
           L++ +     +     L GSI +++PE + +QD+   + +SD+++ G++LY L++G  P+
Sbjct: 178 LATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 237
Query: 245 IAQSNRQKQQMIMAGEFSFYEQTWK---NISSSAKQLISSLLTVDPNRRPSAQELL 297
              +NR  Q + M G         K   N   + K+L++  L    + RP   ++L
Sbjct: 238 SNINNRD-QIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 292

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 82.4 bits (202), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 105/215 (48%), Gaps = 11/215 (5%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYM-EVGAAAVIRQIAEGLAALH 159
           HPN++ L D +  +N + +++E C+GG +   ++  ER + E     V +Q  + L  LH
Sbjct: 93  HPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH 152
Query: 160 QANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF-GSIDYVSPEALL- 217
              I+HRDLK  N LF  D +   +K+ DFG+S+           F G+  +++PE ++ 
Sbjct: 153 DNKIIHRDLKAGNILFTLDGD---IKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMC 209
Query: 218 ---QDR-ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
              +DR    K+D+WSLG+ L  +    PP    +  +    I   E     Q     SS
Sbjct: 210 ETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQP-SRWSS 268
Query: 274 SAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAK 308
           + K  +   L  + + R +  +LL HP+V  DS K
Sbjct: 269 NFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNK 303

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score = 82.4 bits (202), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 68/234 (29%), Positives = 114/234 (48%), Gaps = 42/234 (17%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSG--GELFDRIVAQERYMEVGAAAVIRQIAEGLAAL 158
           H N++ LYDV   +  + L+ E       +L D  V +     V A + + Q+  G+A  
Sbjct: 59  HSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLD--VCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 159 HQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEG-----YTDPVVGLFGSIDYVSP 213
           H   ++HRDLKP+N L   +RE   LKI DFGL+   G     YT  +V L+    Y +P
Sbjct: 117 HDRRVLHRDLKPQNLLI--NREGE-LKIADFGLARAFGIPVRKYTHEIVTLW----YRAP 169
Query: 214 EALLQDRITSKS-DMWSLGVILYILLSGYP--PFIAQSNRQKQQMIMAG----------- 259
           + L+  +  S + D+WS+G I   +++G P  P ++++++  +   + G           
Sbjct: 170 DVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVT 229
Query: 260 -------EFSFYEQ-TW----KNISSSAKQLISSLLTVDPNRRPSAQELLNHPW 301
                   F+ YE   W    K +  S   L+S +L +DPN+R +A++ L H +
Sbjct: 230 ELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAY 283

>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta At 2.4 Angstroms Length = 193

Iteration: 1
 Score = 82.4 bits (202), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 83/162 (51%), Gaps = 8/162 (4%)
Query: 346 RTKKLKNLLGSHDLNEEEIQNLRIHFRTICANGDNATLSEFEEVL-KAMNMSSLVPLAPR 404
           R + +++LL S D  E EIQ     F   C +G + ++ EF+++             A  
Sbjct: 9   RPEVMQDLLESTDFTEHEIQEWYKGFLRDCPSG-HLSMEEFKKIYGNFFPYGDASKFAEH 67
Query: 405 IFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRA 464
           +F  FD N DGT+D RE +   S   + + +  L+  F MYD+D +G I+K E+  +++A
Sbjct: 68  VFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQA 127
Query: 465 LPDDC-----LPVDITEPGKLDE-IFDLMDANNDGKVTFDEF 500
           +         +P D + P K  E IF  MD N DGK++ +EF
Sbjct: 128 IYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEF 169

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 82.4 bits (202), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 66/236 (27%), Positives = 124/236 (52%), Gaps = 24/236 (10%)
Query: 72  PTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFD 131
           PT +Q+        NE+ V+RK     + H N++ L+  Y  +  + ++ + C G  L+ 
Sbjct: 63  PTPQQLQA----FKNEVGVLRK-----TRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYH 112
Query: 132 RI-VAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFG 190
            + + + ++  +    + RQ A+G+  LH  +I+HRDLK  N +FL+  ED  +KI DFG
Sbjct: 113 HLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNN-IFLH--EDLTVKIGDFG 169
Query: 191 LSSVEGY---TDPVVGLFGSIDYVSPEAL-LQDR--ITSKSDMWSLGVILYILLSGYPPF 244
           L++ +     +     L GSI +++PE + +QD+   + +SD+++ G++LY L++G  P+
Sbjct: 170 LATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 229
Query: 245 IAQSNRQKQQMIMAGEFSF---YEQTWKNISSSAKQLISSLLTVDPNRRPSAQELL 297
              +NR  Q + M G         +   N   + K+L++  L    + RP   ++L
Sbjct: 230 SNINNRD-QIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 284

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 82.0 bits (201), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 76/146 (52%), Gaps = 5/146 (3%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           H N++ + DV E+ +  +L++E   G  L + I +        A     QI +G+   H 
Sbjct: 70  HQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHD 129
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV--EGYTDPVVGLFGSIDYVSPEALLQ 218
             IVHRD+KP+N L  +++    LKI DFG++    E        + G++ Y SPE    
Sbjct: 130 MRIVHRDIKPQNILIDSNK---TLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKG 186
Query: 219 DRITSKSDMWSLGVILYILLSGYPPF 244
           +     +D++S+G++LY +L G PPF
Sbjct: 187 EATDECTDIYSIGIVLYEMLVGEPPF 212

>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 107/213 (50%), Gaps = 16/213 (7%)
Query: 104 VIDLYDVYEDQNGVHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQAN 162
           +  L+  ++D N ++L+++   GG+L   +   ++R  E  A   + ++   + ++HQ +
Sbjct: 136 ITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLH 195
Query: 163 IVHRDLKPENCLFLNDREDSPLKIMDFG--LSSVEGYTDPVVGLFGSIDYVSPEALL--- 217
            VHRD+KP+N L      +  +++ DFG  L  +E  T       G+ DY+SPE L    
Sbjct: 196 YVHRDIKPDNILM---DMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAME 252
Query: 218 --QDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGE--FSFYEQTWKNISS 273
             + R   + D WSLGV +Y +L G  PF A+S  +    IM  +  F F  Q   ++S 
Sbjct: 253 GGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQV-TDVSE 311
Query: 274 SAKQLISSLLTVDPNR--RPSAQELLNHPWVIG 304
           +AK LI  L+    +R  +   ++   HP+  G
Sbjct: 312 NAKDLIRRLICSREHRLGQNGIEDFKKHPFFSG 344

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 124/236 (52%), Gaps = 24/236 (10%)
Query: 72  PTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFD 131
           PT +Q+        NE+ V+RK     + H N++ L+  Y  +  + ++ + C G  L+ 
Sbjct: 43  PTPQQLQA----FKNEVGVLRK-----TRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYH 92
Query: 132 RI-VAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFG 190
            + + + ++  +    + RQ A+G+  LH  +I+HRDLK  N +FL+  ED  +KI DFG
Sbjct: 93  HLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNN-IFLH--EDLTVKIGDFG 149
Query: 191 LSSVEGY---TDPVVGLFGSIDYVSPEAL-LQDR--ITSKSDMWSLGVILYILLSGYPPF 244
           L++ +     +     L GSI +++PE + +QD+   + +SD+++ G++LY L++G  P+
Sbjct: 150 LATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
Query: 245 IAQSNRQKQQMIMAGEFSFYEQTWK---NISSSAKQLISSLLTVDPNRRPSAQELL 297
              +NR  Q + M G         K   N   + K+L++  L    + RP   ++L
Sbjct: 210 SNINNRD-QIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 264

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 118/261 (45%), Gaps = 43/261 (16%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      E+ N V+L+  L  G +L + IV  ++  +     +I QI  G
Sbjct: 109 HENVIGLLDVFTPATSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 166
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A+I+HRDLKP N   L   ED  LKI+DFGL+      D + G   +  Y +PE
Sbjct: 167 LKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 221
Query: 215 ALLQD-RITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIM---------------A 258
            +L         D+WS+G I+  LL+G   F    +  + Q IM               +
Sbjct: 222 IMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVISRMPS 281
Query: 259 GEFSFYEQTWKNISSS------------AKQLISSLLTVDPNRRPSAQELLNHPWVIGDS 306
            E   Y  +   +               A  L+  +L +D ++R +A E L HP+     
Sbjct: 282 HEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHPYFSQYH 341
Query: 307 AKEEEMDAEIVSRLQSFNARR 327
             ++E ++E     QSF +R+
Sbjct: 342 DPDDEPESEPYD--QSFESRQ 360

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 66/190 (34%), Positives = 98/190 (51%), Gaps = 15/190 (7%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      E+ N V+L+  L   G   + IV  ++  +     +I QI  G
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKSQKLTDDHVQFLIYQILRG 137
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A+I+HRDLKP N   L   EDS LKI+DFGL       D + G   +  Y +PE
Sbjct: 138 LKYIHSADIIHRDLKPSN---LAVNEDSELKILDFGL--CRHTDDEMTGYVATRWYRAPE 192
Query: 215 ALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
            +L     +++ D+WS+G I+  LL+G   F    +  + ++I+    +   +  K ISS
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 274 -SAKQLISSL 282
            SA+  I SL
Sbjct: 253 ESARNYIQSL 262

>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 104/232 (44%), Gaps = 15/232 (6%)
Query: 102 PNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQA 161
           P V+ L+  ++D   +++++E   GG+L + +++     E  A     ++   L A+H  
Sbjct: 135 PWVVQLFCAFQDDKYLYMVMEYMPGGDLVN-LMSNYDVPEKWAKFYTAEVVLALDAIHSM 193
Query: 162 NIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVV--GLFGSIDYVSPEALLQD 219
            ++HRD+KP+N L     +   LK+ DFG       T  V      G+ DY+SPE L   
Sbjct: 194 GLIHRDVKPDNMLL---DKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQ 250
Query: 220 ----RITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSA 275
                   + D WS+GV L+ +L G  PF A S       IM  + S        IS  A
Sbjct: 251 GGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFPEDAEISKHA 310
Query: 276 KQLISSLLTVDPNR--RPSAQELLNHPWVIGDSAKEE---EMDAEIVSRLQS 322
           K LI + LT    R  R   +E+  HP+   D    +   E  A +V  L S
Sbjct: 311 KNLICAFLTDREVRLGRNGVEEIKQHPFFKNDQWNWDNIRETAAPVVPELSS 362

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 109/252 (43%), Gaps = 47/252 (18%)
Query: 7   KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXX 66
            L+D YE+ +ILG GG S V   + +       VA+K LR   +  P             
Sbjct: 9   HLSDRYELGEILGFGGMSEVH--LARDLRLHRDVAVKVLRADLARDP------------- 53
Query: 67  QIGFFPTRKQVSVSDALLTNEILVMRKIVENVSP--HPNVIDLYDVYEDQNGV----HLI 120
              F+                 L  R+  +N +   HP ++ +Y   E +       +++
Sbjct: 54  --SFY-----------------LRFRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIV 94
Query: 121 LELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRE 180
           +E   G  L D +  +       A  VI    + L   HQ  I+HRD+KP N +      
Sbjct: 95  MEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMI---SA 151
Query: 181 DSPLKIMDFGLSSVEGYTDPVV----GLFGSIDYVSPEALLQDRITSKSDMWSLGVILYI 236
            + +K+MDFG++     +   V     + G+  Y+SPE    D + ++SD++SLG +LY 
Sbjct: 152 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYE 211
Query: 237 LLSGYPPFIAQS 248
           +L+G PPF   S
Sbjct: 212 VLTGEPPFTGDS 223

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/190 (34%), Positives = 99/190 (52%), Gaps = 15/190 (7%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      E+ N V+L+  L   G   + IV  ++  +     +I QI  G
Sbjct: 86  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 143
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A+I+HRDLKP N   L   EDS LKI+DFGL+      D + G   +  Y +PE
Sbjct: 144 LKYIHSADIIHRDLKPSN---LAVNEDSELKILDFGLA--RHTDDEMTGYVATRWYRAPE 198
Query: 215 ALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
            +L     +++ D+WS+G I+  LL+G   F    +  + ++I+    +   +  K ISS
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 258
Query: 274 -SAKQLISSL 282
            SA+  I SL
Sbjct: 259 ESARNYIQSL 268

>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 112/226 (49%), Gaps = 22/226 (9%)
Query: 89  LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQER----YMEVGA 144
           +V +KI+  V     ++ L   +E +  + L++ + +GG++   I   +     + E  A
Sbjct: 233 MVEKKILAKVHSR-FIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRA 291
Query: 145 AAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS-SVEGYTDPVVG 203
                QI  GL  LHQ NI++RDLKPEN L L+D  D  ++I D GL+  ++       G
Sbjct: 292 IFYTAQIVSGLEHLHQRNIIYRDLKPENVL-LDD--DGNVRISDLGLAVELKAGQTKTKG 348
Query: 204 LFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQS----NRQKQQMIMAG 259
             G+  +++PE LL +      D ++LGV LY +++   PF A+     N++ +Q ++  
Sbjct: 349 YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQ 408
Query: 260 EFSFYEQTWKNISSSAKQLISSLLTVDPNRR-----PSAQELLNHP 300
             ++ ++     S ++K    +LL  DP +R      S   L  HP
Sbjct: 409 AVTYPDK----FSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHP 450

>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 112/226 (49%), Gaps = 22/226 (9%)
Query: 89  LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQER----YMEVGA 144
           +V +KI+  V     ++ L   +E +  + L++ + +GG++   I   +     + E  A
Sbjct: 233 MVEKKILAKVHSR-FIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRA 291
Query: 145 AAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS-SVEGYTDPVVG 203
                QI  GL  LHQ NI++RDLKPEN L L+D  D  ++I D GL+  ++       G
Sbjct: 292 IFYTAQIVSGLEHLHQRNIIYRDLKPENVL-LDD--DGNVRISDLGLAVELKAGQTKTKG 348
Query: 204 LFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQS----NRQKQQMIMAG 259
             G+  +++PE LL +      D ++LGV LY +++   PF A+     N++ +Q ++  
Sbjct: 349 YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQ 408
Query: 260 EFSFYEQTWKNISSSAKQLISSLLTVDPNRR-----PSAQELLNHP 300
             ++ ++     S ++K    +LL  DP +R      S   L  HP
Sbjct: 409 AVTYPDK----FSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHP 450

>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 112/226 (49%), Gaps = 22/226 (9%)
Query: 89  LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQER----YMEVGA 144
           +V +KI+  V     ++ L   +E +  + L++ + +GG++   I   +     + E  A
Sbjct: 233 MVEKKILAKVHSR-FIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRA 291
Query: 145 AAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS-SVEGYTDPVVG 203
                QI  GL  LHQ NI++RDLKPEN L L+D  D  ++I D GL+  ++       G
Sbjct: 292 IFYTAQIVSGLEHLHQRNIIYRDLKPENVL-LDD--DGNVRISDLGLAVELKAGQTKTKG 348
Query: 204 LFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQS----NRQKQQMIMAG 259
             G+  +++PE LL +      D ++LGV LY +++   PF A+     N++ +Q ++  
Sbjct: 349 YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQ 408
Query: 260 EFSFYEQTWKNISSSAKQLISSLLTVDPNRR-----PSAQELLNHP 300
             ++ ++     S ++K    +LL  DP +R      S   L  HP
Sbjct: 409 AVTYPDK----FSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHP 450

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/190 (34%), Positives = 99/190 (52%), Gaps = 15/190 (7%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      E+ N V+L+  L   G   + IV  ++  +     +I QI  G
Sbjct: 82  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 139
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A+I+HRDLKP N   L   EDS LKI+DFGL+      D + G   +  Y +PE
Sbjct: 140 LKYIHSADIIHRDLKPSN---LAVNEDSELKILDFGLA--RHTDDEMTGYVATRWYRAPE 194
Query: 215 ALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
            +L     +++ D+WS+G I+  LL+G   F    +  + ++I+    +   +  K ISS
Sbjct: 195 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 254
Query: 274 -SAKQLISSL 282
            SA+  I SL
Sbjct: 255 ESARNYIQSL 264

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 80/262 (30%), Positives = 123/262 (46%), Gaps = 47/262 (17%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      E+ N V+L+  L   G   + IV  ++  +     +I QI  G
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A+I+HRDLKP N   L   ED  LKI+DFGL+      D + G   +  Y +PE
Sbjct: 138 LKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 192
Query: 215 ALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
            +L     +++ D+WS+G I+  LL+G   F    +  + ++I+    +   +  K ISS
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 274 -SAKQLISSL--------------------------LTVDPNRRPSAQELLNHPWVIGDS 306
            SA+  I SL                          L +D ++R +A + L H +     
Sbjct: 253 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF---- 308
Query: 307 AKEEEMDAEIVS--RLQSFNAR 326
           A+  + D E V+  R QSF +R
Sbjct: 309 AQYHDPDDEPVADPRDQSFESR 330

>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 112/226 (49%), Gaps = 22/226 (9%)
Query: 89  LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQER----YMEVGA 144
           +V +KI+  V     ++ L   +E +  + L++ + +GG++   I   +     + E  A
Sbjct: 233 MVEKKILAKVHSR-FIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRA 291
Query: 145 AAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS-SVEGYTDPVVG 203
                QI  GL  LHQ NI++RDLKPEN L L+D  D  ++I D GL+  ++       G
Sbjct: 292 IFYTAQIVSGLEHLHQRNIIYRDLKPENVL-LDD--DGNVRISDLGLAVELKAGQTKTKG 348
Query: 204 LFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQS----NRQKQQMIMAG 259
             G+  +++PE LL +      D ++LGV LY +++   PF A+     N++ +Q ++  
Sbjct: 349 YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQ 408
Query: 260 EFSFYEQTWKNISSSAKQLISSLLTVDPNRR-----PSAQELLNHP 300
             ++ ++     S ++K    +LL  DP +R      S   L  HP
Sbjct: 409 AVTYPDK----FSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHP 450

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 40/228 (17%)
Query: 84  LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVG 143
           L  + L   +I++  S HPN++ L  V   +  +++++EL  GG+    +  +   + V 
Sbjct: 155 LKAKFLQEARILKQYS-HPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVK 213
Query: 144 AA-AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVV 202
               ++   A G+  L     +HRDL   NCL     E + LKI DFG+S  E   D V 
Sbjct: 214 TLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVT---EKNVLKISDFGMSREE--ADGVX 268
Query: 203 GLFGS-----IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMI 256
              G      + + +PEAL   R +S+SD+WS G++L+   S G  P+   SN+Q ++ +
Sbjct: 269 AASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFV 328
Query: 257 MAGE------------FSFYEQTWKNISSSAKQLISSLLTVDPNRRPS 292
             G             F   EQ W                 +P +RPS
Sbjct: 329 EKGGRLPCPELCPDAVFRLMEQCW---------------AYEPGQRPS 361

>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 120/257 (46%), Gaps = 52/257 (20%)
Query: 89  LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVG---AA 145
           LV+ K+V     H N+I L +V+  Q  +    ++    EL D  ++Q   ME+     +
Sbjct: 74  LVLMKVVN----HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMS 129
Query: 146 AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF 205
            ++ Q+  G+  LH A I+HRDLKP N +    + D+ LKI+DFGL+   G +  +    
Sbjct: 130 YLLYQMLVGIKHLHSAGIIHRDLKPSNIVV---KSDATLKILDFGLARTAGTSFMMTPYV 186
Query: 206 GSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF-----IAQSNRQKQQM----- 255
            +  Y +PE +L        D+WS+GVI+  ++ G   F     I Q N+  +Q+     
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSP 246
Query: 256 ------------------IMAGEFSFYEQTWKNI------------SSSAKQLISSLLTV 285
                               AG +SF E+ + ++            +S A+ L+S +L +
Sbjct: 247 EFMKKLQPTVRTYVENRPKYAG-YSF-EKLFPDVLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 286 DPNRRPSAQELLNHPWV 302
           D ++R S  E L HP++
Sbjct: 305 DASKRISVDEALQHPYI 321

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 40/228 (17%)
Query: 84  LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVG 143
           L  + L   +I++  S HPN++ L  V   +  +++++EL  GG+    +  +   + V 
Sbjct: 155 LKAKFLQEARILKQYS-HPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVK 213
Query: 144 AA-AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVV 202
               ++   A G+  L     +HRDL   NCL     E + LKI DFG+S  E   D V 
Sbjct: 214 TLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVT---EKNVLKISDFGMSREE--ADGVY 268
Query: 203 GLFGS-----IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMI 256
              G      + + +PEAL   R +S+SD+WS G++L+   S G  P+   SN+Q ++ +
Sbjct: 269 AASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFV 328
Query: 257 MAGE------------FSFYEQTWKNISSSAKQLISSLLTVDPNRRPS 292
             G             F   EQ W                 +P +RPS
Sbjct: 329 EKGGRLPCPELCPDAVFRLMEQCW---------------AYEPGQRPS 361

>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 121/257 (47%), Gaps = 52/257 (20%)
Query: 89  LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVG---AA 145
           LV+ K+V     H N+I L +V+  Q  +    ++    EL D  ++Q   ME+     +
Sbjct: 74  LVLMKVVN----HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMS 129
Query: 146 AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF 205
            ++ Q+  G+  LH A I+HRDLKP N +    + D+ LKI+DFGL+   G +  +    
Sbjct: 130 YLLYQMLVGIKHLHSAGIIHRDLKPSNIVV---KSDATLKILDFGLARTAGTSFMMTPYV 186
Query: 206 GSIDYVSPEALLQDRITSKSDMWSLGVILYILLSG---YP--PFIAQSNRQKQQM----- 255
            +  Y +PE +L        D+WS+GVI+  ++ G   +P    I Q N+  +Q+     
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSP 246
Query: 256 ------------------IMAGEFSFYEQTWKNI------------SSSAKQLISSLLTV 285
                               AG +SF E+ + ++            +S A+ L+S +L +
Sbjct: 247 EFMKKLQPTVRTYVENRPKYAG-YSF-EKLFPDVLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 286 DPNRRPSAQELLNHPWV 302
           D ++R S  E L HP++
Sbjct: 305 DASKRISVDEALQHPYI 321

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 105/241 (43%), Gaps = 55/241 (22%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGA---------AAVIRQI 151
           HPN++ L DV   +N ++L+ E  S        +  +++M+  A          + + Q+
Sbjct: 62  HPNIVKLLDVIHTENKLYLVFEFLS--------MDLKKFMDASALTGIPLPLIKSYLFQL 113
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEG-----YTDPVVGLFG 206
            +GLA  H   ++HRDLKPEN L      +  +K+ DFGL+   G     Y   VV L+ 
Sbjct: 114 LQGLAFCHSHRVLHRDLKPENLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLW- 169
Query: 207 SIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYE 265
              Y +PE LL  +  S + D+WSLG I   +++    F   S   +   I     +  E
Sbjct: 170 ---YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 226
Query: 266 QTWKNISS-------------------------SAKQLISSLLTVDPNRRPSAQELLNHP 300
             W  ++S                           + L+S +L  DPN+R SA+  L HP
Sbjct: 227 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 286
Query: 301 W 301
           +
Sbjct: 287 F 287

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 105/241 (43%), Gaps = 55/241 (22%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGA---------AAVIRQI 151
           HPN++ L DV   +N ++L+ E  S        +  +++M+  A          + + Q+
Sbjct: 64  HPNIVKLLDVIHTENKLYLVFEFLS--------MDLKKFMDASALTGIPLPLIKSYLFQL 115
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEG-----YTDPVVGLFG 206
            +GLA  H   ++HRDLKPEN L      +  +K+ DFGL+   G     Y   VV L+ 
Sbjct: 116 LQGLAFCHSHRVLHRDLKPENLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLW- 171
Query: 207 SIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYE 265
              Y +PE LL  +  S + D+WSLG I   +++    F   S   +   I     +  E
Sbjct: 172 ---YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 228
Query: 266 QTWKNISS-------------------------SAKQLISSLLTVDPNRRPSAQELLNHP 300
             W  ++S                           + L+S +L  DPN+R SA+  L HP
Sbjct: 229 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 288
Query: 301 W 301
           +
Sbjct: 289 F 289

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 98/190 (51%), Gaps = 15/190 (7%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      E+ N V+L+  L   G   + IV  ++  +     +I QI  G
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A+I+HRDLKP N   L   ED  LKI+DFGL+      D + G   +  Y +PE
Sbjct: 138 LKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 192
Query: 215 ALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
            +L     +++ D+WS+G I+  LL+G   F    +  + ++I+    +   +  K ISS
Sbjct: 193 IMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 274 -SAKQLISSL 282
            SA+  I SL
Sbjct: 253 ESARNYIQSL 262

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/190 (34%), Positives = 100/190 (52%), Gaps = 15/190 (7%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      E+ N V+L+  L  G +L + IV  ++  +     +I QI  G
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKXQKLTDDHVQFLIYQILRG 137
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A+I+HRDLKP N   L   ED  LKI+DFGL+      D + G   +  Y +PE
Sbjct: 138 LKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 192
Query: 215 ALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
            +L     +++ D+WS+G I+  LL+G   F    +  + ++I+    +   +  K ISS
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 274 -SAKQLISSL 282
            SA+  I SL
Sbjct: 253 ESARNYIQSL 262

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 79.7 bits (195), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 77/298 (25%), Positives = 128/298 (42%), Gaps = 56/298 (18%)
Query: 11  EYEVTDI-----LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXX 65
           E E TDI     LG G +  V  G+ K    T  VA+KTL+                   
Sbjct: 14  EMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--VAVKTLKE------------------ 53
Query: 66  XQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCS 125
                          D +   E L    +++ +  HPN++ L  V   +   ++I+E  +
Sbjct: 54  ---------------DTMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIIIEFMT 97
Query: 126 GGELFDRIVAQERYMEVGAAAVIR---QIAEGLAALHQANIVHRDLKPENCLFLNDREDS 182
            G L D +    R  EV A  ++    QI+  +  L + N +HRDL   NCL     E+ 
Sbjct: 98  YGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENH 153
Query: 183 PLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILL 238
            +K+ DFGLS +   + YT      F  I + +PE+L  ++ + KSD+W+ GV+L+ I  
Sbjct: 154 LVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
Query: 239 SGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
            G  P+      Q  +++   E  +  +  +       +L+ +    +P+ RPS  E+
Sbjct: 213 YGMSPYPGIDLSQVYELL---EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 79.7 bits (195), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/190 (34%), Positives = 100/190 (52%), Gaps = 15/190 (7%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      E+ N V+L+  L  G +L + IV  ++  +     +I QI  G
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKXQKLTDDHVQFLIYQILRG 137
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A+I+HRDLKP N   L   ED  LKI+DFGL+      D + G   +  Y +PE
Sbjct: 138 LKYIHSADIIHRDLKPSN---LAVNEDXELKILDFGLA--RHTDDEMTGYVATRWYRAPE 192
Query: 215 ALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
            +L     +++ D+WS+G I+  LL+G   F    +  + ++I+    +   +  K ISS
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 274 -SAKQLISSL 282
            SA+  I SL
Sbjct: 253 ESARNYIQSL 262

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score = 79.7 bits (195), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 98/190 (51%), Gaps = 15/190 (7%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      E+ N V+L+  L   G   + IV  ++  +     +I QI  G
Sbjct: 87  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 144
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A+I+HRDLKP N   L   ED  LKI+DFGL+      D + G   +  Y +PE
Sbjct: 145 LKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTADEMTGYVATRWYRAPE 199
Query: 215 ALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
            +L     +++ D+WS+G I+  LL+G   F    +  + ++I+    +   +  K ISS
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 259
Query: 274 -SAKQLISSL 282
            SA+  I SL
Sbjct: 260 ESARNYIQSL 269

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score = 79.7 bits (195), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/190 (34%), Positives = 100/190 (52%), Gaps = 15/190 (7%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      E+ N V+L+  L  G +L + IV  ++  +     +I QI  G
Sbjct: 76  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 133
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A+I+HRDLKP N   L   ED  LKI+DFGL+      D + G   +  Y +PE
Sbjct: 134 LKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMAGFVATRWYRAPE 188
Query: 215 ALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
            +L     +++ D+WS+G I+  LL+G   F    +  + ++I+    +   +  K ISS
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 248
Query: 274 -SAKQLISSL 282
            SA+  I SL
Sbjct: 249 ESARNYIQSL 258

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score = 79.7 bits (195), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 98/190 (51%), Gaps = 15/190 (7%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      E+ N V+L+  L   G   + IV  ++  +     +I QI  G
Sbjct: 87  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 144
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A+I+HRDLKP N   L   ED  LKI+DFGL+      D + G   +  Y +PE
Sbjct: 145 LKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTADEMTGYVATRWYRAPE 199
Query: 215 ALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
            +L     +++ D+WS+G I+  LL+G   F    +  + ++I+    +   +  K ISS
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 259
Query: 274 -SAKQLISSL 282
            SA+  I SL
Sbjct: 260 ESARNYIQSL 269

>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form Length = 190

Iteration: 1
 Score = 79.7 bits (195), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 89/159 (55%), Gaps = 8/159 (5%)
Query: 349 KLKNLLGSHDLNEEEIQNLRIHFRTICANGDNATLSEFEEVLKAM-NMSSLVPLAPRIFD 407
           +L++L+ S   +++E+Q     F   C +G +   SEF+++ K           A  +F+
Sbjct: 12  QLQDLVRSTRFDKKELQQWYKGFFKDCPSG-HLNKSEFQKIYKQFFPFGDPSAFAEYVFN 70
Query: 408 LFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPD 467
           +FD +++G +D +E +C  S   + + +D L   FQ+YD+D +G I+ +E+  ++ A+  
Sbjct: 71  VFDADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDAIYK 130
Query: 468 DC-----LPVDITEPGK-LDEIFDLMDANNDGKVTFDEF 500
                  LP D   P K +++IF++MD N DG++T +EF
Sbjct: 131 MVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEF 169

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 79.7 bits (195), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 77/298 (25%), Positives = 128/298 (42%), Gaps = 56/298 (18%)
Query: 11  EYEVTDI-----LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXX 65
           E E TDI     LG G +  V  G+ K    T  VA+KTL+                   
Sbjct: 9   EMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--VAVKTLKE------------------ 48
Query: 66  XQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCS 125
                          D +   E L    +++ +  HPN++ L  V   +   ++I+E  +
Sbjct: 49  ---------------DTMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIIIEFMT 92
Query: 126 GGELFDRIVAQERYMEVGAAAVIR---QIAEGLAALHQANIVHRDLKPENCLFLNDREDS 182
            G L D +    R  EV A  ++    QI+  +  L + N +HRDL   NCL     E+ 
Sbjct: 93  YGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENH 148
Query: 183 PLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILL 238
            +K+ DFGLS +   + YT      F  I + +PE+L  ++ + KSD+W+ GV+L+ I  
Sbjct: 149 LVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
Query: 239 SGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
            G  P+      Q  +++   E  +  +  +       +L+ +    +P+ RPS  E+
Sbjct: 208 YGMSPYPGIDLSQVYELL---EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score = 79.7 bits (195), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/190 (34%), Positives = 100/190 (52%), Gaps = 15/190 (7%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      E+ N V+L+  L  G +L + IV  ++  +     +I QI  G
Sbjct: 87  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 144
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A+I+HRDLKP N   L   ED  LKI+DFGL+      D + G   +  Y +PE
Sbjct: 145 LKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTADEMTGYVATRWYRAPE 199
Query: 215 ALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
            +L     +++ D+WS+G I+  LL+G   F    +  + ++I+    +   +  K ISS
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 259
Query: 274 -SAKQLISSL 282
            SA+  I SL
Sbjct: 260 ESARNYIQSL 269

>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364

Iteration: 1
 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 113/255 (44%), Gaps = 48/255 (18%)
Query: 89  LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVG---AA 145
           LV+ K V     H N+I L +V+  Q  +    ++    EL D  + Q  +ME+     +
Sbjct: 74  LVLLKCVN----HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMS 129
Query: 146 AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF 205
            ++ Q+  G+  LH A I+HRDLKP N +    + D  LKI+DFGL+        +    
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTACTNFMMTPYV 186
Query: 206 GSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF-----IAQSNRQKQQM----- 255
            +  Y +PE +L     +  D+WS+G I+  L+ G   F     I Q N+  +Q+     
Sbjct: 187 VTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSA 246
Query: 256 -IMAG------------------EFSFYEQTW---------KNISSSAKQLISSLLTVDP 287
             MA                   +F      W         K  +S A+ L+S +L +DP
Sbjct: 247 EFMAALQPTVRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDP 306
Query: 288 NRRPSAQELLNHPWV 302
           ++R S  E L HP++
Sbjct: 307 DKRISVDEALRHPYI 321

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 77/298 (25%), Positives = 128/298 (42%), Gaps = 56/298 (18%)
Query: 11  EYEVTDI-----LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXX 65
           E E TDI     LG G +  V  G+ K    T  VA+KTL+                   
Sbjct: 9   EMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--VAVKTLKE------------------ 48
Query: 66  XQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCS 125
                          D +   E L    +++ +  HPN++ L  V   +   ++I+E  +
Sbjct: 49  ---------------DTMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIIIEFMT 92
Query: 126 GGELFDRIVAQERYMEVGAAAVIR---QIAEGLAALHQANIVHRDLKPENCLFLNDREDS 182
            G L D +    R  EV A  ++    QI+  +  L + N +HRDL   NCL     E+ 
Sbjct: 93  YGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENH 148
Query: 183 PLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILL 238
            +K+ DFGLS +   + YT      F  I + +PE+L  ++ + KSD+W+ GV+L+ I  
Sbjct: 149 LVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
Query: 239 SGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
            G  P+      Q  +++   E  +  +  +       +L+ +    +P+ RPS  E+
Sbjct: 208 YGMSPYPGIDLSQVYELL---EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score = 79.3 bits (194), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 66/190 (34%), Positives = 100/190 (52%), Gaps = 15/190 (7%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      E+ N V+L+  L  G +L + IV  ++  +     +I QI  G
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A+I+HRDLKP N   L   ED  LKI+DFGL+      D + G   +  Y +PE
Sbjct: 138 LKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMAGFVATRWYRAPE 192
Query: 215 ALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
            +L     +++ D+WS+G I+  LL+G   F    +  + ++I+    +   +  K ISS
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 274 -SAKQLISSL 282
            SA+  I SL
Sbjct: 253 ESARNYIQSL 262

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score = 79.3 bits (194), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 66/190 (34%), Positives = 100/190 (52%), Gaps = 15/190 (7%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      E+ N V+L+  L  G +L + IV  ++  +     +I QI  G
Sbjct: 77  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 134
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A+I+HRDLKP N   L   ED  LKI+DFGL+      D + G   +  Y +PE
Sbjct: 135 LKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 189
Query: 215 ALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
            +L     +++ D+WS+G I+  LL+G   F    +  + ++I+    +   +  K ISS
Sbjct: 190 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 249
Query: 274 -SAKQLISSL 282
            SA+  I SL
Sbjct: 250 ESARNYIQSL 259

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score = 79.3 bits (194), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 98/190 (51%), Gaps = 15/190 (7%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      E+ N V+L+  L   G   + IV  ++  +     +I QI  G
Sbjct: 91  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 148
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A+I+HRDLKP N   L   ED  LKI+DFGL+      D + G   +  Y +PE
Sbjct: 149 LKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 203
Query: 215 ALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
            +L     +++ D+WS+G I+  LL+G   F    +  + ++I+    +   +  K ISS
Sbjct: 204 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 263
Query: 274 -SAKQLISSL 282
            SA+  I SL
Sbjct: 264 ESARNYIQSL 273

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score = 79.3 bits (194), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 98/190 (51%), Gaps = 15/190 (7%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      E+ N V+L+  L   G   + IV  ++  +     +I QI  G
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A+I+HRDLKP N   L   ED  LKI+DFGL+      D + G   +  Y +PE
Sbjct: 138 LKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 192
Query: 215 ALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
            +L     +++ D+WS+G I+  LL+G   F    +  + ++I+    +   +  K ISS
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 274 -SAKQLISSL 282
            SA+  I SL
Sbjct: 253 ESARNYIQSL 262

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score = 79.3 bits (194), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 98/190 (51%), Gaps = 15/190 (7%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      E+ N V+L+  L   G   + IV  ++  +     +I QI  G
Sbjct: 92  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 149
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A+I+HRDLKP N   L   ED  LKI+DFGL+      D + G   +  Y +PE
Sbjct: 150 LKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 204
Query: 215 ALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
            +L     +++ D+WS+G I+  LL+G   F    +  + ++I+    +   +  K ISS
Sbjct: 205 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 264
Query: 274 -SAKQLISSL 282
            SA+  I SL
Sbjct: 265 ESARNYIQSL 274

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score = 79.3 bits (194), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 98/190 (51%), Gaps = 15/190 (7%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      E+ N V+L+  L   G   + IV  ++  +     +I QI  G
Sbjct: 86  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 143
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A+I+HRDLKP N   L   ED  LKI+DFGL+      D + G   +  Y +PE
Sbjct: 144 LKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 198
Query: 215 ALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
            +L     +++ D+WS+G I+  LL+G   F    +  + ++I+    +   +  K ISS
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 258
Query: 274 -SAKQLISSL 282
            SA+  I SL
Sbjct: 259 ESARNYIQSL 268

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score = 79.3 bits (194), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 98/190 (51%), Gaps = 15/190 (7%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      E+ N V+L+  L   G   + IV  ++  +     +I QI  G
Sbjct: 92  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 149
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A+I+HRDLKP N   L   ED  LKI+DFGL+      D + G   +  Y +PE
Sbjct: 150 LKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 204
Query: 215 ALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
            +L     +++ D+WS+G I+  LL+G   F    +  + ++I+    +   +  K ISS
Sbjct: 205 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 264
Query: 274 -SAKQLISSL 282
            SA+  I SL
Sbjct: 265 ESARNYIQSL 274

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score = 79.3 bits (194), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 98/190 (51%), Gaps = 15/190 (7%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      E+ N V+L+  L   G   + IV  ++  +     +I QI  G
Sbjct: 92  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 149
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A+I+HRDLKP N   L   ED  LKI+DFGL+      D + G   +  Y +PE
Sbjct: 150 LKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 204
Query: 215 ALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
            +L     +++ D+WS+G I+  LL+G   F    +  + ++I+    +   +  K ISS
Sbjct: 205 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 264
Query: 274 -SAKQLISSL 282
            SA+  I SL
Sbjct: 265 ESARNYIQSL 274

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score = 79.3 bits (194), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 66/190 (34%), Positives = 100/190 (52%), Gaps = 15/190 (7%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      E+ N V+L+  L  G +L + IV  ++  +     +I QI  G
Sbjct: 77  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 134
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A+I+HRDLKP N   L   ED  LKI+DFGL+      D + G   +  Y +PE
Sbjct: 135 LKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 189
Query: 215 ALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
            +L     +++ D+WS+G I+  LL+G   F    +  + ++I+    +   +  K ISS
Sbjct: 190 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 249
Query: 274 -SAKQLISSL 282
            SA+  I SL
Sbjct: 250 ESARNYIQSL 259

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score = 79.3 bits (194), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 98/190 (51%), Gaps = 15/190 (7%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      E+ N V+L+  L   G   + IV  ++  +     +I QI  G
Sbjct: 78  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 135
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A+I+HRDLKP N   L   ED  LKI+DFGL+      D + G   +  Y +PE
Sbjct: 136 LKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 190
Query: 215 ALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
            +L     +++ D+WS+G I+  LL+G   F    +  + ++I+    +   +  K ISS
Sbjct: 191 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 250
Query: 274 -SAKQLISSL 282
            SA+  I SL
Sbjct: 251 ESARNYIQSL 260

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score = 79.3 bits (194), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 66/190 (34%), Positives = 100/190 (52%), Gaps = 15/190 (7%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      E+ N V+L+  L  G +L + IV  ++  +     +I QI  G
Sbjct: 76  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 133
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A+I+HRDLKP N   L   ED  LKI+DFGL+      D + G   +  Y +PE
Sbjct: 134 LKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 188
Query: 215 ALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
            +L     +++ D+WS+G I+  LL+G   F    +  + ++I+    +   +  K ISS
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 248
Query: 274 -SAKQLISSL 282
            SA+  I SL
Sbjct: 249 ESARNYIQSL 258

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score = 79.3 bits (194), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 66/190 (34%), Positives = 100/190 (52%), Gaps = 15/190 (7%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      E+ N V+L+  L  G +L + IV  ++  +     +I QI  G
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A+I+HRDLKP N   L   ED  LKI+DFGL+      D + G   +  Y +PE
Sbjct: 138 LKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMAGFVATRWYRAPE 192
Query: 215 ALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
            +L     +++ D+WS+G I+  LL+G   F    +  + ++I+    +   +  K ISS
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 274 -SAKQLISSL 282
            SA+  I SL
Sbjct: 253 ESARNYIQSL 262

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score = 79.3 bits (194), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 66/190 (34%), Positives = 100/190 (52%), Gaps = 15/190 (7%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      E+ N V+L+  L  G +L + IV  ++  +     +I QI  G
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A+I+HRDLKP N   L   ED  LKI+DFGL+      D + G   +  Y +PE
Sbjct: 138 LKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 192
Query: 215 ALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
            +L     +++ D+WS+G I+  LL+G   F    +  + ++I+    +   +  K ISS
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 274 -SAKQLISSL 282
            SA+  I SL
Sbjct: 253 ESARNYIQSL 262

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score = 79.3 bits (194), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 98/190 (51%), Gaps = 15/190 (7%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      E+ N V+L+  L   G   + IV  ++  +     +I QI  G
Sbjct: 91  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 148
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A+I+HRDLKP N   L   ED  LKI+DFGL+      D + G   +  Y +PE
Sbjct: 149 LKYIHSADIIHRDLKPSN---LAVNEDXELKILDFGLA--RHTDDEMTGYVATRWYRAPE 203
Query: 215 ALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
            +L     +++ D+WS+G I+  LL+G   F    +  + ++I+    +   +  K ISS
Sbjct: 204 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 263
Query: 274 -SAKQLISSL 282
            SA+  I SL
Sbjct: 264 ESARNYIQSL 273

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score = 79.3 bits (194), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 66/190 (34%), Positives = 100/190 (52%), Gaps = 15/190 (7%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      E+ N V+L+  L  G +L + IV  ++  +     +I QI  G
Sbjct: 76  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 133
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A+I+HRDLKP N   L   ED  LKI+DFGL+      D + G   +  Y +PE
Sbjct: 134 LKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 188
Query: 215 ALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
            +L     +++ D+WS+G I+  LL+G   F    +  + ++I+    +   +  K ISS
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 248
Query: 274 -SAKQLISSL 282
            SA+  I SL
Sbjct: 249 ESARNYIQSL 258

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 79.3 bits (194), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 70/289 (24%), Positives = 131/289 (45%), Gaps = 39/289 (13%)
Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIG 69
           +E E    +G+GGF +V +G  +   + + VAIK+L                      +G
Sbjct: 19  NEIEYEKQIGKGGFGLVHKG--RLVKDKSVVAIKSL---------------------ILG 55
Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
                 ++         E+ +M  +      HPN++ LY +    N   +++E    G+L
Sbjct: 56  DSEGETEMIEKFQEFQREVFIMSNLN-----HPNIVKLYGLM--HNPPRMVMEFVPCGDL 108
Query: 130 FDRIVAQERYMEVGAAA-VIRQIAEGLAALHQAN--IVHRDLKPENCLFLNDREDSPL-- 184
           + R++ +   ++      ++  IA G+  +   N  IVHRDL+  N    +  E++P+  
Sbjct: 109 YHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCA 168
Query: 185 KIMDFGLSSVEGYTDPVVGLFGSIDYVSPEAL--LQDRITSKSDMWSLGVILYILLSGYP 242
           K+ DFGLS    ++  V GL G+  +++PE +   ++  T K+D +S  +ILY +L+G  
Sbjct: 169 KVADFGLSQQSVHS--VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEG 226
Query: 243 PFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRP 291
           PF   S  + + + M  E        ++     + +I    + DP +RP
Sbjct: 227 PFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRP 275

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score = 79.3 bits (194), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 66/190 (34%), Positives = 100/190 (52%), Gaps = 15/190 (7%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      E+ N V+L+  L  G +L + IV  ++  +     +I QI  G
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A+I+HRDLKP N   L   ED  LKI+DFGL+      D + G   +  Y +PE
Sbjct: 138 LKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 192
Query: 215 ALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
            +L     +++ D+WS+G I+  LL+G   F    +  + ++I+    +   +  K ISS
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 274 -SAKQLISSL 282
            SA+  I SL
Sbjct: 253 ESARNYIQSL 262

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score = 79.0 bits (193), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 66/190 (34%), Positives = 100/190 (52%), Gaps = 15/190 (7%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      E+ N V+L+  L  G +L + IV  ++  +     +I QI  G
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A+I+HRDLKP N   L   ED  LKI+DFGL+      D + G   +  Y +PE
Sbjct: 138 LKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 192
Query: 215 ALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
            +L     +++ D+WS+G I+  LL+G   F    +  + ++I+    +   +  K ISS
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 274 -SAKQLISSL 282
            SA+  I SL
Sbjct: 253 ESARNYIQSL 262

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score = 79.0 bits (193), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 66/190 (34%), Positives = 100/190 (52%), Gaps = 15/190 (7%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      E+ N V+L+  L  G +L + IV  ++  +     +I QI  G
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A+I+HRDLKP N   L   ED  LKI+DFGL+      D + G   +  Y +PE
Sbjct: 138 LKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 192
Query: 215 ALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
            +L     +++ D+WS+G I+  LL+G   F    +  + ++I+    +   +  K ISS
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 274 -SAKQLISSL 282
            SA+  I SL
Sbjct: 253 ESARNYIQSL 262

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score = 79.0 bits (193), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 66/190 (34%), Positives = 100/190 (52%), Gaps = 15/190 (7%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      E+ N V+L+  L  G +L + IV  ++  +     +I QI  G
Sbjct: 85  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 142
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A+I+HRDLKP N   L   ED  LKI+DFGL+      D + G   +  Y +PE
Sbjct: 143 LKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 197
Query: 215 ALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
            +L     +++ D+WS+G I+  LL+G   F    +  + ++I+    +   +  K ISS
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 257
Query: 274 -SAKQLISSL 282
            SA+  I SL
Sbjct: 258 ESARNYIQSL 267

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score = 79.0 bits (193), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 66/190 (34%), Positives = 100/190 (52%), Gaps = 15/190 (7%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      E+ N V+L+  L  G +L + IV  ++  +     +I QI  G
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A+I+HRDLKP N   L   ED  LKI+DFGL+      D + G   +  Y +PE
Sbjct: 138 LKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGXVATRWYRAPE 192
Query: 215 ALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
            +L     +++ D+WS+G I+  LL+G   F    +  + ++I+    +   +  K ISS
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 274 -SAKQLISSL 282
            SA+  I SL
Sbjct: 253 ESARNYIQSL 262

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score = 79.0 bits (193), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 66/190 (34%), Positives = 100/190 (52%), Gaps = 15/190 (7%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      E+ N V+L+  L  G +L + IV  ++  +     +I QI  G
Sbjct: 87  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 144
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A+I+HRDLKP N   L   ED  LKI+DFGL+      D + G   +  Y +PE
Sbjct: 145 LKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 199
Query: 215 ALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
            +L     +++ D+WS+G I+  LL+G   F    +  + ++I+    +   +  K ISS
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 259
Query: 274 -SAKQLISSL 282
            SA+  I SL
Sbjct: 260 ESARNYIQSL 269

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score = 79.0 bits (193), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 98/190 (51%), Gaps = 15/190 (7%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      E+ N V+L+  L   G   + IV  ++  +     +I QI  G
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A+I+HRDLKP N   L   ED  LKI+DFGL+      D + G   +  Y +PE
Sbjct: 138 LKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 192
Query: 215 ALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
            +L     +++ D+WS+G I+  LL+G   F    +  + ++I+    +   +  K ISS
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 274 -SAKQLISSL 282
            SA+  I SL
Sbjct: 253 ESARNYIQSL 262

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score = 79.0 bits (193), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 66/190 (34%), Positives = 100/190 (52%), Gaps = 15/190 (7%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      E+ N V+L+  L  G +L + IV  ++  +     +I QI  G
Sbjct: 85  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 142
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A+I+HRDLKP N   L   ED  LKI+DFGL+      D + G   +  Y +PE
Sbjct: 143 LKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 197
Query: 215 ALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
            +L     +++ D+WS+G I+  LL+G   F    +  + ++I+    +   +  K ISS
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 257
Query: 274 -SAKQLISSL 282
            SA+  I SL
Sbjct: 258 ESARNYIQSL 267

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score = 79.0 bits (193), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 66/190 (34%), Positives = 100/190 (52%), Gaps = 15/190 (7%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      E+ N V+L+  L  G +L + IV  ++  +     +I QI  G
Sbjct: 79  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 136
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A+I+HRDLKP N   L   ED  LKI+DFGL+      D + G   +  Y +PE
Sbjct: 137 LKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 191
Query: 215 ALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
            +L     +++ D+WS+G I+  LL+G   F    +  + ++I+    +   +  K ISS
Sbjct: 192 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 251
Query: 274 -SAKQLISSL 282
            SA+  I SL
Sbjct: 252 ESARNYIQSL 261

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score = 79.0 bits (193), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 98/190 (51%), Gaps = 15/190 (7%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      E+ N V+L+  L   G   + IV  ++  +     +I QI  G
Sbjct: 82  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 139
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A+I+HRDLKP N   L   ED  LKI+DFGL+      D + G   +  Y +PE
Sbjct: 140 LKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 194
Query: 215 ALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
            +L     +++ D+WS+G I+  LL+G   F    +  + ++I+    +   +  K ISS
Sbjct: 195 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 254
Query: 274 -SAKQLISSL 282
            SA+  I SL
Sbjct: 255 ESARNYIQSL 264

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score = 79.0 bits (193), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 98/190 (51%), Gaps = 15/190 (7%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      E+ N V+L+  L   G   + IV  ++  +     +I QI  G
Sbjct: 99  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 156
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A+I+HRDLKP N   L   ED  LKI+DFGL+      D + G   +  Y +PE
Sbjct: 157 LKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 211
Query: 215 ALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
            +L     +++ D+WS+G I+  LL+G   F    +  + ++I+    +   +  K ISS
Sbjct: 212 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 271
Query: 274 -SAKQLISSL 282
            SA+  I SL
Sbjct: 272 ESARNYIQSL 281

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score = 79.0 bits (193), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 66/190 (34%), Positives = 100/190 (52%), Gaps = 15/190 (7%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      E+ N V+L+  L  G +L + IV  ++  +     +I QI  G
Sbjct: 85  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 142
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A+I+HRDLKP N   L   ED  LKI+DFGL+      D + G   +  Y +PE
Sbjct: 143 LKYIHSADIIHRDLKPSN---LAVNEDXELKILDFGLA--RHTDDEMTGYVATRWYRAPE 197
Query: 215 ALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
            +L     +++ D+WS+G I+  LL+G   F    +  + ++I+    +   +  K ISS
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 257
Query: 274 -SAKQLISSL 282
            SA+  I SL
Sbjct: 258 ESARNYIQSL 267

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score = 79.0 bits (193), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 98/190 (51%), Gaps = 15/190 (7%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      E+ N V+L+  L   G   + IV  ++  +     +I QI  G
Sbjct: 100 HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 157
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A+I+HRDLKP N   L   ED  LKI+DFGL+      D + G   +  Y +PE
Sbjct: 158 LKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 212
Query: 215 ALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
            +L     +++ D+WS+G I+  LL+G   F    +  + ++I+    +   +  K ISS
Sbjct: 213 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 272
Query: 274 -SAKQLISSL 282
            SA+  I SL
Sbjct: 273 ESARNYIQSL 282

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score = 79.0 bits (193), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 98/190 (51%), Gaps = 15/190 (7%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      E+ N V+L+  L   G   + IV  ++  +     +I QI  G
Sbjct: 82  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 139
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A+I+HRDLKP N   L   ED  LKI+DFGL+      D + G   +  Y +PE
Sbjct: 140 LKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 194
Query: 215 ALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
            +L     +++ D+WS+G I+  LL+G   F    +  + ++I+    +   +  K ISS
Sbjct: 195 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 254
Query: 274 -SAKQLISSL 282
            SA+  I SL
Sbjct: 255 ESARNYIQSL 264

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score = 79.0 bits (193), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 98/190 (51%), Gaps = 15/190 (7%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      E+ N V+L+  L   G   + IV  ++  +     +I QI  G
Sbjct: 103 HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 160
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A+I+HRDLKP N   L   ED  LKI+DFGL+      D + G   +  Y +PE
Sbjct: 161 LKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 215
Query: 215 ALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
            +L     +++ D+WS+G I+  LL+G   F    +  + ++I+    +   +  K ISS
Sbjct: 216 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 275
Query: 274 -SAKQLISSL 282
            SA+  I SL
Sbjct: 276 ESARNYIQSL 285

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score = 79.0 bits (193), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 66/190 (34%), Positives = 100/190 (52%), Gaps = 15/190 (7%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      E+ N V+L+  L  G +L + IV  ++  +     +I QI  G
Sbjct: 85  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 142
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A+I+HRDLKP N   L   ED  LKI+DFGL+      D + G   +  Y +PE
Sbjct: 143 LKYIHSADIIHRDLKPSN---LAVNEDXELKILDFGLA--RHTDDEMTGYVATRWYRAPE 197
Query: 215 ALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
            +L     +++ D+WS+G I+  LL+G   F    +  + ++I+    +   +  K ISS
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 257
Query: 274 -SAKQLISSL 282
            SA+  I SL
Sbjct: 258 ESARNYIQSL 267

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score = 79.0 bits (193), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 98/190 (51%), Gaps = 15/190 (7%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      E+ N V+L+  L   G   + IV  ++  +     +I QI  G
Sbjct: 82  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 139
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A+I+HRDLKP N   L   ED  LKI+DFGL+      D + G   +  Y +PE
Sbjct: 140 LKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 194
Query: 215 ALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
            +L     +++ D+WS+G I+  LL+G   F    +  + ++I+    +   +  K ISS
Sbjct: 195 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 254
Query: 274 -SAKQLISSL 282
            SA+  I SL
Sbjct: 255 ESARNYIQSL 264

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 79.0 bits (193), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 104/241 (43%), Gaps = 55/241 (22%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGA---------AAVIRQI 151
           HPN++ L DV   +N ++L+ E              +++M+  A          + + Q+
Sbjct: 61  HPNIVKLLDVIHTENKLYLVFEFLHQD--------LKKFMDASALTGIPLPLIKSYLFQL 112
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS-----SVEGYTDPVVGLFG 206
            +GLA  H   ++HRDLKP+N L      +  +K+ DFGL+      V  YT  VV L+ 
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLW- 168
Query: 207 SIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYE 265
              Y +PE LL  +  S + D+WSLG I   +++    F   S   +   I     +  E
Sbjct: 169 ---YRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 225
Query: 266 QTWKNISS-------------------------SAKQLISSLLTVDPNRRPSAQELLNHP 300
             W  ++S                           + L+S +L  DPN+R SA+  L HP
Sbjct: 226 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 285
Query: 301 W 301
           +
Sbjct: 286 F 286

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score = 79.0 bits (193), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 66/190 (34%), Positives = 100/190 (52%), Gaps = 15/190 (7%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      E+ N V+L+  L  G +L + IV  ++  +     +I QI  G
Sbjct: 86  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 143
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A+I+HRDLKP N   L   ED  LKI+DFGL+      D + G   +  Y +PE
Sbjct: 144 LKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 198
Query: 215 ALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
            +L     +++ D+WS+G I+  LL+G   F    +  + ++I+    +   +  K ISS
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 258
Query: 274 -SAKQLISSL 282
            SA+  I SL
Sbjct: 259 ESARNYIQSL 268

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score = 79.0 bits (193), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 98/190 (51%), Gaps = 15/190 (7%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      E+ N V+L+  L   G   + IV  ++  +     +I QI  G
Sbjct: 99  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 156
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A+I+HRDLKP N   L   ED  LKI+DFGL+      D + G   +  Y +PE
Sbjct: 157 LKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 211
Query: 215 ALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
            +L     +++ D+WS+G I+  LL+G   F    +  + ++I+    +   +  K ISS
Sbjct: 212 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 271
Query: 274 -SAKQLISSL 282
            SA+  I SL
Sbjct: 272 ESARNYIQSL 281

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score = 79.0 bits (193), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 98/190 (51%), Gaps = 15/190 (7%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      E+ N V+L+  L   G   + IV  ++  +     +I QI  G
Sbjct: 90  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 147
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A+I+HRDLKP N   L   ED  LKI+DFGL+      D + G   +  Y +PE
Sbjct: 148 LKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 202
Query: 215 ALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
            +L     +++ D+WS+G I+  LL+G   F    +  + ++I+    +   +  K ISS
Sbjct: 203 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 262
Query: 274 -SAKQLISSL 282
            SA+  I SL
Sbjct: 263 ESARNYIQSL 272

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score = 79.0 bits (193), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 98/190 (51%), Gaps = 15/190 (7%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      E+ N V+L+  L   G   + IV  ++  +     +I QI  G
Sbjct: 100 HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 157
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A+I+HRDLKP N   L   ED  LKI+DFGL+      D + G   +  Y +PE
Sbjct: 158 LKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 212
Query: 215 ALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
            +L     +++ D+WS+G I+  LL+G   F    +  + ++I+    +   +  K ISS
Sbjct: 213 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 272
Query: 274 -SAKQLISSL 282
            SA+  I SL
Sbjct: 273 ESARNYIQSL 282

>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383

Iteration: 1
 Score = 79.0 bits (193), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 98/190 (51%), Gaps = 15/190 (7%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      E+ N V+L+  L   G   + IV  ++  +     +I QI  G
Sbjct: 103 HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 160
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A+I+HRDLKP N   L   ED  LKI+DFGL+      D + G   +  Y +PE
Sbjct: 161 LKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMXGYVATRWYRAPE 215
Query: 215 ALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
            +L     +++ D+WS+G I+  LL+G   F    +  + ++I+    +   +  K ISS
Sbjct: 216 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 275
Query: 274 -SAKQLISSL 282
            SA+  I SL
Sbjct: 276 ESARNYIQSL 285

>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 79.0 bits (193), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 119/257 (46%), Gaps = 52/257 (20%)
Query: 89  LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVG---AA 145
           LV+ K+V     H N+I L +V+  Q  +    ++    EL D  ++Q   ME+     +
Sbjct: 74  LVLMKVVN----HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMS 129
Query: 146 AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF 205
            ++ Q+  G+  LH A I+HRDLKP N +    + D+ LKI+DFGL+   G +  +    
Sbjct: 130 YLLYQMLVGIKHLHSAGIIHRDLKPSNIVV---KSDATLKILDFGLARTAGTSFMMTPYV 186
Query: 206 GSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF-----IAQSNRQKQQM----- 255
            +  Y +PE +L        D+WS+G I+  ++ G   F     I Q N+  +Q+     
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSP 246
Query: 256 ------------------IMAGEFSFYEQTWKNI------------SSSAKQLISSLLTV 285
                               AG +SF E+ + ++            +S A+ L+S +L +
Sbjct: 247 EFMKKLQPTVRTYVENRPKYAG-YSF-EKLFPDVLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 286 DPNRRPSAQELLNHPWV 302
           D ++R S  E L HP++
Sbjct: 305 DASKRISVDEALQHPYI 321

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score = 79.0 bits (193), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 103/210 (49%), Gaps = 19/210 (9%)
Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           + + E  S HP ++ L+  ++ ++ +  ++E  +GG+L   +  Q +  E  A     +I
Sbjct: 103 KHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEI 162
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGY--TDPVVGLFGSID 209
           +  L  LH+  I++RDLK +N L      +  +K+ D+G+   EG    D      G+ +
Sbjct: 163 SLALNYLHERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCK-EGLRPGDTTSTFCGTPN 218
Query: 210 YVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF--IAQSNRQKQ-------QMIMAGE 260
           Y++PE L  +      D W+LGV+++ +++G  PF  +  S+   Q       Q+I+  +
Sbjct: 219 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ 278
Query: 261 FSFYEQTWKNISSSAKQLISSLLTVDPNRR 290
                +  +++S  A  ++ S L  DP  R
Sbjct: 279 I----RIPRSLSVKAASVLKSFLNKDPKER 304

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 78.6 bits (192), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 77/298 (25%), Positives = 127/298 (42%), Gaps = 56/298 (18%)
Query: 11  EYEVTDI-----LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXX 65
           E E TDI     LG G +  V  G+ K    T  VA+KTL+                   
Sbjct: 13  EMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--VAVKTLKE------------------ 52
Query: 66  XQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCS 125
                          D +   E L    +++ +  HPN++ L  V   +   ++I E  +
Sbjct: 53  ---------------DTMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMT 96
Query: 126 GGELFDRIVAQERYMEVGAAAVIR---QIAEGLAALHQANIVHRDLKPENCLFLNDREDS 182
            G L D +    R  EV A  ++    QI+  +  L + N +HRDL   NCL     E+ 
Sbjct: 97  YGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENH 152
Query: 183 PLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILL 238
            +K+ DFGLS +   + YT      F  I + +PE+L  ++ + KSD+W+ GV+L+ I  
Sbjct: 153 LVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 211
Query: 239 SGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
            G  P+      Q  +++   E  +  +  +       +L+ +    +P+ RPS  E+
Sbjct: 212 YGMSPYPGIDLSQVYELL---EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 266

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score = 78.6 bits (192), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 103/210 (49%), Gaps = 19/210 (9%)
Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           + + E  S HP ++ L+  ++ ++ +  ++E  +GG+L   +  Q +  E  A     +I
Sbjct: 71  KHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEI 130
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYT--DPVVGLFGSID 209
           +  L  LH+  I++RDLK +N L      +  +K+ D+G+   EG    D      G+ +
Sbjct: 131 SLALNYLHERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPN 186
Query: 210 YVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF--IAQSNRQKQ-------QMIMAGE 260
           Y++PE L  +      D W+LGV+++ +++G  PF  +  S+   Q       Q+I+  +
Sbjct: 187 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ 246
Query: 261 FSFYEQTWKNISSSAKQLISSLLTVDPNRR 290
                +  +++S  A  ++ S L  DP  R
Sbjct: 247 I----RIPRSMSVKAASVLKSFLNKDPKER 272

>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360

Iteration: 1
 Score = 78.6 bits (192), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 72/255 (28%), Positives = 114/255 (44%), Gaps = 48/255 (18%)
Query: 89  LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVG---AA 145
           LV+ K V     H N+I L +V+  Q  +    ++    EL D  + Q  +ME+     +
Sbjct: 72  LVLLKCVN----HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMS 127
Query: 146 AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF 205
            ++ Q+  G+  LH A I+HRDLKP N +    + D  LKI+DFGL+        +    
Sbjct: 128 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTASTNFMMTPYV 184
Query: 206 GSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF-----IAQSNRQKQQM-IMAG 259
            +  Y +PE +L        D+WS+G I+  L+ G   F     I Q N+  +Q+   + 
Sbjct: 185 VTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSA 244
Query: 260 EF---------------------SFYE--QTW---------KNISSSAKQLISSLLTVDP 287
           EF                     +F E    W         K  +S A+ L+S +L +DP
Sbjct: 245 EFMAALQPTVRNYVENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDP 304
Query: 288 NRRPSAQELLNHPWV 302
           ++R S  E L HP++
Sbjct: 305 DKRISVDEALRHPYI 319

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score = 78.6 bits (192), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 98/190 (51%), Gaps = 15/190 (7%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      E+ N V+L+  L   G   + IV  ++  +     +I QI  G
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A+I+HRDLKP N   L   ED  LKI+DFGL+      D + G   +  Y +PE
Sbjct: 138 LKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 192
Query: 215 ALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
            +L     +++ D+WS+G I+  LL+G   F    +  + ++I+    +   +  K ISS
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 274 -SAKQLISSL 282
            SA+  I SL
Sbjct: 253 ESARNYIQSL 262

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 78.6 bits (192), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 77/298 (25%), Positives = 127/298 (42%), Gaps = 56/298 (18%)
Query: 11  EYEVTDI-----LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXX 65
           E E TDI     LG G +  V  G+ K    T  VA+KTL+                   
Sbjct: 11  EMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--VAVKTLKE------------------ 50
Query: 66  XQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCS 125
                          D +   E L    +++ +  HPN++ L  V   +   ++I E  +
Sbjct: 51  ---------------DTMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMT 94
Query: 126 GGELFDRIVAQERYMEVGAAAVIR---QIAEGLAALHQANIVHRDLKPENCLFLNDREDS 182
            G L D +    R  EV A  ++    QI+  +  L + N +HRDL   NCL     E+ 
Sbjct: 95  YGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENH 150
Query: 183 PLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILL 238
            +K+ DFGLS +   + YT      F  I + +PE+L  ++ + KSD+W+ GV+L+ I  
Sbjct: 151 LVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
Query: 239 SGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
            G  P+      Q  +++   E  +  +  +       +L+ +    +P+ RPS  E+
Sbjct: 210 YGMSPYPGIDLSQVYELL---EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 264

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 78.6 bits (192), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 104/241 (43%), Gaps = 55/241 (22%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGA---------AAVIRQI 151
           HPN++ L DV   +N ++L+ E              +++M+  A          + + Q+
Sbjct: 68  HPNIVKLLDVIHTENKLYLVFEFLHQD--------LKKFMDASALTGIPLPLIKSYLFQL 119
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEG-----YTDPVVGLFG 206
            +GLA  H   ++HRDLKP+N L      +  +K+ DFGL+   G     YT  VV L+ 
Sbjct: 120 LQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLW- 175
Query: 207 SIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYE 265
              Y +PE LL  +  S + D+WSLG I   +++    F   S   +   I     +  E
Sbjct: 176 ---YRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 232
Query: 266 QTWKNISS-------------------------SAKQLISSLLTVDPNRRPSAQELLNHP 300
             W  ++S                           + L+S +L  DPN+R SA+  L HP
Sbjct: 233 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 292
Query: 301 W 301
           +
Sbjct: 293 F 293

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score = 78.6 bits (192), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 66/190 (34%), Positives = 100/190 (52%), Gaps = 15/190 (7%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      E+ N V+L+  L  G +L + IV  ++  +     +I QI  G
Sbjct: 86  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 143
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A+I+HRDLKP N   L   ED  LKI+DFGL+      D + G   +  Y +PE
Sbjct: 144 LKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 198
Query: 215 ALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
            +L     +++ D+WS+G I+  LL+G   F    +  + ++I+    +   +  K ISS
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 258
Query: 274 -SAKQLISSL 282
            SA+  I SL
Sbjct: 259 ESARNYIQSL 268

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 78.6 bits (192), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 77/298 (25%), Positives = 127/298 (42%), Gaps = 56/298 (18%)
Query: 11  EYEVTDI-----LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXX 65
           E E TDI     LG G +  V  G+ K    T  VA+KTL+                   
Sbjct: 11  EMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--VAVKTLKE------------------ 50
Query: 66  XQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCS 125
                          D +   E L    +++ +  HPN++ L  V   +   ++I E  +
Sbjct: 51  ---------------DTMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMT 94
Query: 126 GGELFDRIVAQERYMEVGAAAVIR---QIAEGLAALHQANIVHRDLKPENCLFLNDREDS 182
            G L D +    R  EV A  ++    QI+  +  L + N +HRDL   NCL     E+ 
Sbjct: 95  YGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENH 150
Query: 183 PLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILL 238
            +K+ DFGLS +   + YT      F  I + +PE+L  ++ + KSD+W+ GV+L+ I  
Sbjct: 151 LVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
Query: 239 SGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
            G  P+      Q  +++   E  +  +  +       +L+ +    +P+ RPS  E+
Sbjct: 210 YGMSPYPGIDLSQVYELL---EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 264

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 78.6 bits (192), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 77/298 (25%), Positives = 127/298 (42%), Gaps = 56/298 (18%)
Query: 11  EYEVTDI-----LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXX 65
           E E TDI     LG G +  V  G+ K    T  VA+KTL+                   
Sbjct: 14  EMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--VAVKTLKE------------------ 53
Query: 66  XQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCS 125
                          D +   E L    +++ +  HPN++ L  V   +   ++I E  +
Sbjct: 54  ---------------DTMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMT 97
Query: 126 GGELFDRIVAQERYMEVGAAAVIR---QIAEGLAALHQANIVHRDLKPENCLFLNDREDS 182
            G L D +    R  EV A  ++    QI+  +  L + N +HRDL   NCL     E+ 
Sbjct: 98  YGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENH 153
Query: 183 PLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILL 238
            +K+ DFGLS +   + YT      F  I + +PE+L  ++ + KSD+W+ GV+L+ I  
Sbjct: 154 LVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
Query: 239 SGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
            G  P+      Q  +++   E  +  +  +       +L+ +    +P+ RPS  E+
Sbjct: 213 YGMSPYPGIDLSQVYELL---EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 78.6 bits (192), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 77/298 (25%), Positives = 127/298 (42%), Gaps = 56/298 (18%)
Query: 11  EYEVTDI-----LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXX 65
           E E TDI     LG G +  V  G+ K    T  VA+KTL+                   
Sbjct: 9   EMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--VAVKTLKE------------------ 48
Query: 66  XQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCS 125
                          D +   E L    +++ +  HPN++ L  V   +   ++I E  +
Sbjct: 49  ---------------DTMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMT 92
Query: 126 GGELFDRIVAQERYMEVGAAAVIR---QIAEGLAALHQANIVHRDLKPENCLFLNDREDS 182
            G L D +    R  EV A  ++    QI+  +  L + N +HRDL   NCL     E+ 
Sbjct: 93  YGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENH 148
Query: 183 PLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILL 238
            +K+ DFGLS +   + YT      F  I + +PE+L  ++ + KSD+W+ GV+L+ I  
Sbjct: 149 LVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
Query: 239 SGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
            G  P+      Q  +++   E  +  +  +       +L+ +    +P+ RPS  E+
Sbjct: 208 YGMSPYPGIDLSQVYELL---EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 78.6 bits (192), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 95/216 (43%), Gaps = 11/216 (5%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HPN I     Y  ++   L++E C G       V ++   EV  AAV     +GLA LH 
Sbjct: 113 HPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHS 172
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALL--- 217
            N++HRD+K  N L     E   +K+ DFG +S+     P     G+  +++PE +L   
Sbjct: 173 HNMIHRDVKAGNILL---SEPGLVKLGDFGSASIMA---PANXFVGTPYWMAPEVILAMD 226
Query: 218 QDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQ 277
           + +   K D+WSLG+    L    PP    +       I   E    +    + S   + 
Sbjct: 227 EGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSG--HWSEYFRN 284
Query: 278 LISSLLTVDPNRRPSAQELLNHPWVIGDSAKEEEMD 313
            + S L   P  RP+++ LL H +V+ +      MD
Sbjct: 285 FVDSCLQKIPQDRPTSEVLLKHRFVLRERPPTVIMD 320

>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281

Iteration: 1
 Score = 78.6 bits (192), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 89/307 (28%), Positives = 126/307 (41%), Gaps = 53/307 (17%)
Query: 1   MGQETRKLT---DEYEVTDILGRGGFSVVRRGIKKTC-GETNQVAIKTLRRIGSTTPYGF 56
           MG  TR      +  E+   +G G F  V +GI  +       VAIKT +   S      
Sbjct: 3   MGSSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSD----- 57
Query: 57  PXXXXXXXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNG 116
                                SV +  L  E L MR+       HP+++ L  V   +N 
Sbjct: 58  ---------------------SVREKFL-QEALTMRQF-----DHPHIVKLIGVI-TENP 89
Query: 117 VHLILELCSGGELFDRIVAQERYMEVGAAAVI---RQIAEGLAALHQANIVHRDLKPENC 173
           V +I+ELC+ GEL  R   Q R   +  A++I    Q++  LA L     VHRD+   N 
Sbjct: 90  VWIIMELCTLGEL--RSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNV 147
Query: 174 LFLNDREDSPLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSL 230
           L      +  +K+ DFGLS       Y     G    I +++PE++   R TS SD+W  
Sbjct: 148 LV---SSNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESINFRRFTSASDVWMF 203
Query: 231 GVILY-ILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNR 289
           GV ++ IL+ G  PF    N      I  GE         N   +   L++     DP+R
Sbjct: 204 GVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP---PNCPPTLYSLMTKCWAYDPSR 260
Query: 290 RPSAQEL 296
           RP   EL
Sbjct: 261 RPRFTEL 267

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 78.6 bits (192), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 77/298 (25%), Positives = 127/298 (42%), Gaps = 56/298 (18%)
Query: 11  EYEVTDI-----LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXX 65
           E E TDI     LG G +  V  G+ K    T  VA+KTL+                   
Sbjct: 14  EMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--VAVKTLKE------------------ 53
Query: 66  XQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCS 125
                          D +   E L    +++ +  HPN++ L  V   +   ++I E  +
Sbjct: 54  ---------------DTMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMT 97
Query: 126 GGELFDRIVAQERYMEVGAAAVI---RQIAEGLAALHQANIVHRDLKPENCLFLNDREDS 182
            G L D +    R  EV A  ++    QI+  +  L + N +HRDL   NCL     E+ 
Sbjct: 98  YGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENH 153
Query: 183 PLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILL 238
            +K+ DFGLS +   + YT      F  I + +PE+L  ++ + KSD+W+ GV+L+ I  
Sbjct: 154 LVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
Query: 239 SGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
            G  P+      Q  +++   E  +  +  +       +L+ +    +P+ RPS  E+
Sbjct: 213 YGMSPYPGIDLSQVYELL---EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 78.6 bits (192), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 95/216 (43%), Gaps = 11/216 (5%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HPN I     Y  ++   L++E C G       V ++   EV  AAV     +GLA LH 
Sbjct: 74  HPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHS 133
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALL--- 217
            N++HRD+K  N L     E   +K+ DFG +S+     P     G+  +++PE +L   
Sbjct: 134 HNMIHRDVKAGNILL---SEPGLVKLGDFGSASIMA---PANXFVGTPYWMAPEVILAMD 187
Query: 218 QDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQ 277
           + +   K D+WSLG+    L    PP    +       I   E    +    + S   + 
Sbjct: 188 EGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSG--HWSEYFRN 245
Query: 278 LISSLLTVDPNRRPSAQELLNHPWVIGDSAKEEEMD 313
            + S L   P  RP+++ LL H +V+ +      MD
Sbjct: 246 FVDSCLQKIPQDRPTSEVLLKHRFVLRERPPTVIMD 281

>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304

Iteration: 1
 Score = 78.6 bits (192), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 89/307 (28%), Positives = 126/307 (41%), Gaps = 53/307 (17%)
Query: 1   MGQETRKLT---DEYEVTDILGRGGFSVVRRGIKKTC-GETNQVAIKTLRRIGSTTPYGF 56
           MG  TR      +  E+   +G G F  V +GI  +       VAIKT +   S      
Sbjct: 26  MGSSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSD----- 80
Query: 57  PXXXXXXXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNG 116
                                SV +  L  E L MR+       HP+++ L  V   +N 
Sbjct: 81  ---------------------SVREKFL-QEALTMRQF-----DHPHIVKLIGVI-TENP 112
Query: 117 VHLILELCSGGELFDRIVAQERYMEVGAAAVI---RQIAEGLAALHQANIVHRDLKPENC 173
           V +I+ELC+ GEL  R   Q R   +  A++I    Q++  LA L     VHRD+   N 
Sbjct: 113 VWIIMELCTLGEL--RSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNV 170
Query: 174 LFLNDREDSPLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSL 230
           L      +  +K+ DFGLS       Y     G    I +++PE++   R TS SD+W  
Sbjct: 171 LV---SSNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESINFRRFTSASDVWMF 226
Query: 231 GVILY-ILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNR 289
           GV ++ IL+ G  PF    N      I  GE         N   +   L++     DP+R
Sbjct: 227 GVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP---PNCPPTLYSLMTKCWAYDPSR 283
Query: 290 RPSAQEL 296
           RP   EL
Sbjct: 284 RPRFTEL 290

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 78.6 bits (192), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 77/298 (25%), Positives = 127/298 (42%), Gaps = 56/298 (18%)
Query: 11  EYEVTDI-----LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXX 65
           E E TDI     LG G +  V  G+ K    T  VA+KTL+                   
Sbjct: 14  EMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--VAVKTLKE------------------ 53
Query: 66  XQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCS 125
                          D +   E L    +++ +  HPN++ L  V   +   ++I E  +
Sbjct: 54  ---------------DTMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMT 97
Query: 126 GGELFDRIVAQERYMEVGAAAVIR---QIAEGLAALHQANIVHRDLKPENCLFLNDREDS 182
            G L D +    R  EV A  ++    QI+  +  L + N +HRDL   NCL     E+ 
Sbjct: 98  YGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENH 153
Query: 183 PLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILL 238
            +K+ DFGLS +   + YT      F  I + +PE+L  ++ + KSD+W+ GV+L+ I  
Sbjct: 154 LVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
Query: 239 SGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
            G  P+      Q  +++   E  +  +  +       +L+ +    +P+ RPS  E+
Sbjct: 213 YGMSPYPGIDLSQVYELL---EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 78.6 bits (192), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 77/298 (25%), Positives = 127/298 (42%), Gaps = 56/298 (18%)
Query: 11  EYEVTDI-----LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXX 65
           E E TDI     LG G +  V  G+ K    T  VA+KTL+                   
Sbjct: 9   EMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--VAVKTLKE------------------ 48
Query: 66  XQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCS 125
                          D +   E L    +++ +  HPN++ L  V   +   ++I E  +
Sbjct: 49  ---------------DTMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMT 92
Query: 126 GGELFDRIVAQERYMEVGAAAVIR---QIAEGLAALHQANIVHRDLKPENCLFLNDREDS 182
            G L D +    R  EV A  ++    QI+  +  L + N +HRDL   NCL     E+ 
Sbjct: 93  YGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENH 148
Query: 183 PLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILL 238
            +K+ DFGLS +   + YT      F  I + +PE+L  ++ + KSD+W+ GV+L+ I  
Sbjct: 149 LVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
Query: 239 SGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
            G  P+      Q  +++   E  +  +  +       +L+ +    +P+ RPS  E+
Sbjct: 208 YGMSPYPGIDLSQVYELL---EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 78.6 bits (192), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 104/241 (43%), Gaps = 55/241 (22%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGA---------AAVIRQI 151
           HPN++ L DV   +N ++L+ E              +++M+  A          + + Q+
Sbjct: 62  HPNIVKLLDVIHTENKLYLVFEFLHQD--------LKKFMDASALTGIPLPLIKSYLFQL 113
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEG-----YTDPVVGLFG 206
            +GLA  H   ++HRDLKP+N L      +  +K+ DFGL+   G     YT  VV L+ 
Sbjct: 114 LQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLW- 169
Query: 207 SIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYE 265
              Y +PE LL  +  S + D+WSLG I   +++    F   S   +   I     +  E
Sbjct: 170 ---YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 226
Query: 266 QTWKNISS-------------------------SAKQLISSLLTVDPNRRPSAQELLNHP 300
             W  ++S                           + L+S +L  DPN+R SA+  L HP
Sbjct: 227 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 286
Query: 301 W 301
           +
Sbjct: 287 F 287

>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320

Iteration: 1
 Score = 78.6 bits (192), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 79/285 (27%), Positives = 123/285 (43%), Gaps = 69/285 (24%)
Query: 75  KQVSVSDALLTN---------EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCS 125
           K+V++   +LT+         EI ++R++      H N++ ++++    +G  L  ++ S
Sbjct: 37  KRVAIKKIVLTDPQSVKHALREIKIIRRL-----DHDNIVKVFEIL-GPSGSQLTDDVGS 90
Query: 126 GGELFDRIVAQERYMEVGAAAVIRQ--------------IAEGLAALHQANIVHRDLKPE 171
             EL    + QE YME   A V+ Q              +  GL  +H AN++HRDLKP 
Sbjct: 91  LTELNSVYIVQE-YMETDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPA 149
Query: 172 NCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSID-------YVSPEALLQ-DRITS 223
           N LF+N  ED  LKI DFGL+ +    DP     G +        Y SP  LL  +  T 
Sbjct: 150 N-LFIN-TEDLVLKIGDFGLARI---MDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTK 204
Query: 224 KSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYE------------------ 265
             DMW+ G I   +L+G   F      ++ Q+I+      +E                  
Sbjct: 205 AIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDM 264
Query: 266 --------QTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
                   Q    IS  A   +  +LT  P  R +A+E L+HP++
Sbjct: 265 TEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYM 309

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 78.6 bits (192), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 78/297 (26%), Positives = 126/297 (42%), Gaps = 54/297 (18%)
Query: 11  EYEVTDI-----LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXX 65
           E E TDI     LG G F  V  G+ K    T  VA+KTL+                   
Sbjct: 7   EMERTDITMKHKLGGGQFGEVYEGVWKKYSLT--VAVKTLKE------------------ 46
Query: 66  XQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCS 125
                          D +   E L    +++ +  HPN++ L  V   +   ++I E  +
Sbjct: 47  ---------------DTMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMT 90
Query: 126 GGELFDRIVAQERYMEVGAAAVIR---QIAEGLAALHQANIVHRDLKPENCLFLNDREDS 182
            G L D +    R  EV A  ++    QI+  +  L + N +HRDL   NCL     E+ 
Sbjct: 91  YGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENH 146
Query: 183 PLKIMDFGLSSV-EGYTDPV-VGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILLS 239
            +K+ DFGLS +  G T     G    I + +PE+L  ++ + KSD+W+ GV+L+ I   
Sbjct: 147 LVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 206
Query: 240 GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
           G  P+      Q  +++   E  +  +  +       +L+ +    +P+ RPS  E+
Sbjct: 207 GMSPYPGIDPSQVYELL---EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 260

>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656

Iteration: 1
 Score = 78.6 bits (192), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 103/226 (45%), Gaps = 23/226 (10%)
Query: 78  SVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE 137
           SV +  L  E L MR+       HP+++ L  V   +N V +I+ELC+ GEL  R   Q 
Sbjct: 433 SVREKFL-QEALTMRQF-----DHPHIVKLIGVI-TENPVWIIMELCTLGEL--RSFLQV 483
Query: 138 RYMEVGAAAVI---RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV 194
           R   +  A++I    Q++  LA L     VHRD+   N L      +  +K+ DFGLS  
Sbjct: 484 RKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV---SSNDCVKLGDFGLSRY 540
Query: 195 ---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILLSGYPPFIAQSNR 250
                Y     G    I +++PE++   R TS SD+W  GV ++ IL+ G  PF    N 
Sbjct: 541 MEDSTYYKASKGKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 599
Query: 251 QKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
                I  GE         N   +   L++     DP+RRP   EL
Sbjct: 600 DVIGRIENGE---RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 642

>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 78.6 bits (192), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 103/226 (45%), Gaps = 23/226 (10%)
Query: 78  SVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE 137
           SV +  L  E L MR+       HP+++ L  V   +N V +I+ELC+ GEL  R   Q 
Sbjct: 53  SVREKFL-QEALTMRQF-----DHPHIVKLIGVI-TENPVWIIMELCTLGEL--RSFLQV 103
Query: 138 RYMEVGAAAVI---RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV 194
           R   +  A++I    Q++  LA L     VHRD+   N L      +  +K+ DFGLS  
Sbjct: 104 RKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV---SSNDCVKLGDFGLSRY 160
Query: 195 ---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILLSGYPPFIAQSNR 250
                Y     G    I +++PE++   R TS SD+W  GV ++ IL+ G  PF    N 
Sbjct: 161 MEDSTYYKASKGKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 219
Query: 251 QKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
                I  GE         N   +   L++     DP+RRP   EL
Sbjct: 220 DVIGRIENGERLPMP---PNCPPTLYSLMTKCWAYDPSRRPRFTEL 262

>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276

Iteration: 1
 Score = 78.6 bits (192), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 103/225 (45%), Gaps = 21/225 (9%)
Query: 78  SVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE 137
           SV +  L  E L MR+       HP+++ L  V   +N V +I+ELC+ GEL  R   Q 
Sbjct: 53  SVREKFL-QEALTMRQF-----DHPHIVKLIGVI-TENPVWIIMELCTLGEL--RSFLQV 103
Query: 138 RYMEVGAAAVI---RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV 194
           R   +  A++I    Q++  LA L     VHRD+   N L      +  +K+ DFGLS  
Sbjct: 104 RKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV---SSNDCVKLGDFGLSRY 160
Query: 195 EGYTDPVVGLFGS--IDYVSPEALLQDRITSKSDMWSLGVILY-ILLSGYPPFIAQSNRQ 251
              +       G   I +++PE++   R TS SD+W  GV ++ IL+ G  PF    N  
Sbjct: 161 MEDSTXXKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 220
Query: 252 KQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
               I  GE         N   +   L++     DP+RRP   EL
Sbjct: 221 VIGRIENGERLPMP---PNCPPTLYSLMTKCWAYDPSRRPRFTEL 262

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 78.6 bits (192), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 77/298 (25%), Positives = 127/298 (42%), Gaps = 56/298 (18%)
Query: 11  EYEVTDI-----LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXX 65
           E E TDI     LG G +  V  G+ K    T  VA+KTL+                   
Sbjct: 9   EMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--VAVKTLKE------------------ 48
Query: 66  XQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCS 125
                          D +   E L    +++ +  HPN++ L  V   +   ++I E  +
Sbjct: 49  ---------------DTMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMT 92
Query: 126 GGELFDRIVAQERYMEVGAAAVIR---QIAEGLAALHQANIVHRDLKPENCLFLNDREDS 182
            G L D +    R  EV A  ++    QI+  +  L + N +HRDL   NCL     E+ 
Sbjct: 93  YGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENH 148
Query: 183 PLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILL 238
            +K+ DFGLS +   + YT      F  I + +PE+L  ++ + KSD+W+ GV+L+ I  
Sbjct: 149 LVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
Query: 239 SGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
            G  P+      Q  +++   E  +  +  +       +L+ +    +P+ RPS  E+
Sbjct: 208 YGMSPYPGIDLSQVYELL---EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262

>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281

Iteration: 1
 Score = 78.6 bits (192), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 103/226 (45%), Gaps = 23/226 (10%)
Query: 78  SVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE 137
           SV +  L  E L MR+       HP+++ L  V   +N V +I+ELC+ GEL  R   Q 
Sbjct: 55  SVREKFL-QEALTMRQF-----DHPHIVKLIGVI-TENPVWIIMELCTLGEL--RSFLQV 105
Query: 138 RYMEVGAAAVI---RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV 194
           R   +  A++I    Q++  LA L     VHRD+   N L      +  +K+ DFGLS  
Sbjct: 106 RKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV---SSNDCVKLGDFGLSRY 162
Query: 195 ---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILLSGYPPFIAQSNR 250
                Y     G    I +++PE++   R TS SD+W  GV ++ IL+ G  PF    N 
Sbjct: 163 MEDSTYYKASKGKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 221
Query: 251 QKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
                I  GE         N   +   L++     DP+RRP   EL
Sbjct: 222 DVIGRIENGERLPMP---PNCPPTLYSLMTKCWAYDPSRRPRFTEL 264

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score = 78.6 bits (192), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 98/190 (51%), Gaps = 15/190 (7%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      E+ N V+L+  L   G   + IV  ++  +     +I QI  G
Sbjct: 100 HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 157
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A+I+HRDLKP N   L   ED  LKI+DFGL+      D + G   +  Y +PE
Sbjct: 158 LKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMXGXVATRWYRAPE 212
Query: 215 ALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
            +L     +++ D+WS+G I+  LL+G   F    +  + ++I+    +   +  K ISS
Sbjct: 213 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 272
Query: 274 -SAKQLISSL 282
            SA+  I SL
Sbjct: 273 ESARNYIQSL 282

>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276

Iteration: 1
 Score = 78.6 bits (192), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 103/226 (45%), Gaps = 23/226 (10%)
Query: 78  SVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE 137
           SV +  L  E L MR+       HP+++ L  V   +N V +I+ELC+ GEL  R   Q 
Sbjct: 53  SVREKFL-QEALTMRQF-----DHPHIVKLIGVI-TENPVWIIMELCTLGEL--RSFLQV 103
Query: 138 RYMEVGAAAVI---RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV 194
           R   +  A++I    Q++  LA L     VHRD+   N L      +  +K+ DFGLS  
Sbjct: 104 RKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV---SSNDCVKLGDFGLSRY 160
Query: 195 ---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILLSGYPPFIAQSNR 250
                Y     G    I +++PE++   R TS SD+W  GV ++ IL+ G  PF    N 
Sbjct: 161 MEDSTYYKASKGKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 219
Query: 251 QKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
                I  GE         N   +   L++     DP+RRP   EL
Sbjct: 220 DVIGRIENGERLPMP---PNCPPTLYSLMTKCWAYDPSRRPRFTEL 262

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 78.6 bits (192), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 77/298 (25%), Positives = 127/298 (42%), Gaps = 56/298 (18%)
Query: 11  EYEVTDI-----LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXX 65
           E E TDI     LG G +  V  G+ K    T  VA+KTL+                   
Sbjct: 22  EMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--VAVKTLKE------------------ 61
Query: 66  XQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCS 125
                          D +   E L    +++ +  HPN++ L  V   +   ++I E  +
Sbjct: 62  ---------------DTMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMT 105
Query: 126 GGELFDRIVAQERYMEVGAAAVIR---QIAEGLAALHQANIVHRDLKPENCLFLNDREDS 182
            G L D +    R  EV A  ++    QI+  +  L + N +HRDL   NCL     E+ 
Sbjct: 106 YGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENH 161
Query: 183 PLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILL 238
            +K+ DFGLS +   + YT      F  I + +PE+L  ++ + KSD+W+ GV+L+ I  
Sbjct: 162 LVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 220
Query: 239 SGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
            G  P+      Q  +++   E  +  +  +       +L+ +    +P+ RPS  E+
Sbjct: 221 YGMSPYPGIDLSQVYELL---EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 275

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 78.6 bits (192), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 77/298 (25%), Positives = 127/298 (42%), Gaps = 56/298 (18%)
Query: 11  EYEVTDI-----LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXX 65
           E E TDI     LG G +  V  G+ K    T  VA+KTL+                   
Sbjct: 9   EMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--VAVKTLKE------------------ 48
Query: 66  XQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCS 125
                          D +   E L    +++ +  HPN++ L  V   +   ++I E  +
Sbjct: 49  ---------------DTMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMT 92
Query: 126 GGELFDRIVAQERYMEVGAAAVIR---QIAEGLAALHQANIVHRDLKPENCLFLNDREDS 182
            G L D +    R  EV A  ++    QI+  +  L + N +HRDL   NCL     E+ 
Sbjct: 93  YGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENH 148
Query: 183 PLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILL 238
            +K+ DFGLS +   + YT      F  I + +PE+L  ++ + KSD+W+ GV+L+ I  
Sbjct: 149 LVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
Query: 239 SGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
            G  P+      Q  +++   E  +  +  +       +L+ +    +P+ RPS  E+
Sbjct: 208 YGMSPYPGIDLSQVYELL---EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 78.6 bits (192), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 104/241 (43%), Gaps = 55/241 (22%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGA---------AAVIRQI 151
           HPN++ L DV   +N ++L+ E              +++M+  A          + + Q+
Sbjct: 60  HPNIVKLLDVIHTENKLYLVFEFLHQD--------LKKFMDASALTGIPLPLIKSYLFQL 111
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS-----SVEGYTDPVVGLFG 206
            +GLA  H   ++HRDLKP+N L      +  +K+ DFGL+      V  YT  VV L+ 
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLW- 167
Query: 207 SIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYE 265
              Y +PE LL  +  S + D+WSLG I   +++    F   S   +   I     +  E
Sbjct: 168 ---YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 224
Query: 266 QTWKNISS-------------------------SAKQLISSLLTVDPNRRPSAQELLNHP 300
             W  ++S                           + L+S +L  DPN+R SA+  L HP
Sbjct: 225 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 284
Query: 301 W 301
           +
Sbjct: 285 F 285

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 78.6 bits (192), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 104/241 (43%), Gaps = 55/241 (22%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGA---------AAVIRQI 151
           HPN++ L DV   +N ++L+ E              +++M+  A          + + Q+
Sbjct: 61  HPNIVKLLDVIHTENKLYLVFEFLHQD--------LKKFMDASALTGIPLPLIKSYLFQL 112
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEG-----YTDPVVGLFG 206
            +GLA  H   ++HRDLKP+N L      +  +K+ DFGL+   G     YT  VV L+ 
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLW- 168
Query: 207 SIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYE 265
              Y +PE LL  +  S + D+WSLG I   +++    F   S   +   I     +  E
Sbjct: 169 ---YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 225
Query: 266 QTWKNISS-------------------------SAKQLISSLLTVDPNRRPSAQELLNHP 300
             W  ++S                           + L+S +L  DPN+R SA+  L HP
Sbjct: 226 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 285
Query: 301 W 301
           +
Sbjct: 286 F 286

>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282

Iteration: 1
 Score = 78.2 bits (191), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 103/226 (45%), Gaps = 23/226 (10%)
Query: 78  SVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE 137
           SV +  L  E L MR+       HP+++ L  V   +N V +I+ELC+ GEL  R   Q 
Sbjct: 56  SVREKFL-QEALTMRQF-----DHPHIVKLIGVI-TENPVWIIMELCTLGEL--RSFLQV 106
Query: 138 RYMEVGAAAVI---RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV 194
           R   +  A++I    Q++  LA L     VHRD+   N L      +  +K+ DFGLS  
Sbjct: 107 RKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV---SSNDCVKLGDFGLSRY 163
Query: 195 ---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILLSGYPPFIAQSNR 250
                Y     G    I +++PE++   R TS SD+W  GV ++ IL+ G  PF    N 
Sbjct: 164 MEDSTYYKASKGKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 222
Query: 251 QKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
                I  GE         N   +   L++     DP+RRP   EL
Sbjct: 223 DVIGRIENGERLPMP---PNCPPTLYSLMTKCWAYDPSRRPRFTEL 265

>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 119/257 (46%), Gaps = 52/257 (20%)
Query: 89  LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVG---AA 145
           LV+ K+V     H N+I L +V+  Q  +    ++    EL D  ++Q   ME+     +
Sbjct: 74  LVLMKVVN----HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMS 129
Query: 146 AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF 205
            ++ Q+  G+  LH A I+HRDLKP N +    + D+ LKI+DFGL+   G +  +    
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDATLKILDFGLARTAGTSFMMTPYV 186
Query: 206 GSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF-----IAQSNRQKQQM----- 255
            +  Y +PE +L        D+WS+G I+  ++ G   F     I Q N+  +Q+     
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSP 246
Query: 256 ------------------IMAGEFSFYEQTWKNI------------SSSAKQLISSLLTV 285
                               AG +SF E+ + ++            +S A+ L+S +L +
Sbjct: 247 EFMKKLQPTVRTYVENRPKYAG-YSF-EKLFPDVLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 286 DPNRRPSAQELLNHPWV 302
           D ++R S  E L HP++
Sbjct: 305 DASKRISVDEALQHPYI 321

>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 103/210 (49%), Gaps = 19/210 (9%)
Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           + + E  S HP ++ L+  ++ ++ +  ++E  +GG+L   +  Q +  E  A     +I
Sbjct: 56  KHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEI 115
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYT--DPVVGLFGSID 209
           +  L  LH+  I++RDLK +N L      +  +K+ D+G+   EG    D      G+ +
Sbjct: 116 SLALNYLHERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPN 171
Query: 210 YVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF--IAQSNRQKQ-------QMIMAGE 260
           Y++PE L  +      D W+LGV+++ +++G  PF  +  S+   Q       Q+I+  +
Sbjct: 172 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ 231
Query: 261 FSFYEQTWKNISSSAKQLISSLLTVDPNRR 290
                +  +++S  A  ++ S L  DP  R
Sbjct: 232 I----RIPRSLSVKAASVLKSFLNKDPKER 257

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 104/241 (43%), Gaps = 55/241 (22%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGA---------AAVIRQI 151
           HPN++ L DV   +N ++L+ E              +++M+  A          + + Q+
Sbjct: 61  HPNIVKLLDVIHTENKLYLVFEFLHQD--------LKKFMDASALTGIPLPLIKSYLFQL 112
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS-----SVEGYTDPVVGLFG 206
            +GLA  H   ++HRDLKP+N L      +  +K+ DFGL+      V  YT  VV L+ 
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLW- 168
Query: 207 SIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYE 265
              Y +PE LL  +  S + D+WSLG I   +++    F   S   +   I     +  E
Sbjct: 169 ---YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 225
Query: 266 QTWKNISS-------------------------SAKQLISSLLTVDPNRRPSAQELLNHP 300
             W  ++S                           + L+S +L  DPN+R SA+  L HP
Sbjct: 226 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 285
Query: 301 W 301
           +
Sbjct: 286 F 286

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 104/241 (43%), Gaps = 55/241 (22%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGA---------AAVIRQI 151
           HPN++ L DV   +N ++L+ E              +++M+  A          + + Q+
Sbjct: 60  HPNIVKLLDVIHTENKLYLVFEFLHQD--------LKKFMDASALTGIPLPLIKSYLFQL 111
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS-----SVEGYTDPVVGLFG 206
            +GLA  H   ++HRDLKP+N L      +  +K+ DFGL+      V  YT  VV L+ 
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLW- 167
Query: 207 SIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYE 265
              Y +PE LL  +  S + D+WSLG I   +++    F   S   +   I     +  E
Sbjct: 168 ---YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 224
Query: 266 QTWKNISS-------------------------SAKQLISSLLTVDPNRRPSAQELLNHP 300
             W  ++S                           + L+S +L  DPN+R SA+  L HP
Sbjct: 225 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 284
Query: 301 W 301
           +
Sbjct: 285 F 285

>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 103/226 (45%), Gaps = 23/226 (10%)
Query: 78  SVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE 137
           SV +  L  E L MR+       HP+++ L  V   +N V +I+ELC+ GEL  R   Q 
Sbjct: 50  SVREKFL-QEALTMRQF-----DHPHIVKLIGVI-TENPVWIIMELCTLGEL--RSFLQV 100
Query: 138 RYMEVGAAAVI---RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV 194
           R   +  A++I    Q++  LA L     VHRD+   N L      +  +K+ DFGLS  
Sbjct: 101 RKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV---SSNDCVKLGDFGLSRY 157
Query: 195 ---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILLSGYPPFIAQSNR 250
                Y     G    I +++PE++   R TS SD+W  GV ++ IL+ G  PF    N 
Sbjct: 158 MEDSTYYKASKGKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 216
Query: 251 QKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
                I  GE         N   +   L++     DP+RRP   EL
Sbjct: 217 DVIGRIENGERLPMP---PNCPPTLYSLMTKCWAYDPSRRPRFTEL 259

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 104/241 (43%), Gaps = 55/241 (22%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGA---------AAVIRQI 151
           HPN++ L DV   +N ++L+ E              +++M+  A          + + Q+
Sbjct: 65  HPNIVKLLDVIHTENKLYLVFEFLHQD--------LKKFMDASALTGIPLPLIKSYLFQL 116
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS-----SVEGYTDPVVGLFG 206
            +GLA  H   ++HRDLKP+N L      +  +K+ DFGL+      V  YT  VV L+ 
Sbjct: 117 LQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLW- 172
Query: 207 SIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYE 265
              Y +PE LL  +  S + D+WSLG I   +++    F   S   +   I     +  E
Sbjct: 173 ---YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 229
Query: 266 QTWKNISS-------------------------SAKQLISSLLTVDPNRRPSAQELLNHP 300
             W  ++S                           + L+S +L  DPN+R SA+  L HP
Sbjct: 230 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 289
Query: 301 W 301
           +
Sbjct: 290 F 290

>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 100/208 (48%), Gaps = 12/208 (5%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HP +++L+  ++D+  + ++++L  GG+L   +     + E      I ++   L  L  
Sbjct: 74  HPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQN 133
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDR 220
             I+HRD+KP+N L     E   + I DF ++++      +  + G+  Y++PE     +
Sbjct: 134 QRIIHRDMKPDNILL---DEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRK 190
Query: 221 ITSKS---DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSF--YEQTWKNISSSA 275
               S   D WSLGV  Y LL G  P+  +S+   ++++   E +   Y   W   S   
Sbjct: 191 GAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSAW---SQEM 247
Query: 276 KQLISSLLTVDPNRRPSA-QELLNHPWV 302
             L+  LL  +P++R S   ++ N P++
Sbjct: 248 VSLLKKLLEPNPDQRFSQLSDVQNFPYM 275

>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 103/210 (49%), Gaps = 19/210 (9%)
Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           + + E  S HP ++ L+  ++ ++ +  ++E  +GG+L   +  Q +  E  A     +I
Sbjct: 60  KHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEI 119
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGY--TDPVVGLFGSID 209
           +  L  LH+  I++RDLK +N L      +  +K+ D+G+   EG    D      G+ +
Sbjct: 120 SLALNYLHERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPN 175
Query: 210 YVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF--IAQSNRQKQ-------QMIMAGE 260
           Y++PE L  +      D W+LGV+++ +++G  PF  +  S+   Q       Q+I+  +
Sbjct: 176 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ 235
Query: 261 FSFYEQTWKNISSSAKQLISSLLTVDPNRR 290
                +  +++S  A  ++ S L  DP  R
Sbjct: 236 I----RIPRSLSVKAASVLKSFLNKDPKER 261

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 104/241 (43%), Gaps = 55/241 (22%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGA---------AAVIRQI 151
           HPN++ L DV   +N ++L+ E              +++M+  A          + + Q+
Sbjct: 61  HPNIVKLLDVIHTENKLYLVFEFLHQD--------LKKFMDASALTGIPLPLIKSYLFQL 112
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEG-----YTDPVVGLFG 206
            +GLA  H   ++HRDLKP+N L      +  +K+ DFGL+   G     YT  VV L+ 
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLW- 168
Query: 207 SIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYE 265
              Y +PE LL  +  S + D+WSLG I   +++    F   S   +   I     +  E
Sbjct: 169 ---YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 225
Query: 266 QTWKNISS-------------------------SAKQLISSLLTVDPNRRPSAQELLNHP 300
             W  ++S                           + L+S +L  DPN+R SA+  L HP
Sbjct: 226 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 285
Query: 301 W 301
           +
Sbjct: 286 F 286

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 104/241 (43%), Gaps = 55/241 (22%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGA---------AAVIRQI 151
           HPN++ L DV   +N ++L+ E              +++M+  A          + + Q+
Sbjct: 60  HPNIVKLLDVIHTENKLYLVFEFLHQD--------LKKFMDASALTGIPLPLIKSYLFQL 111
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEG-----YTDPVVGLFG 206
            +GLA  H   ++HRDLKP+N L      +  +K+ DFGL+   G     YT  VV L+ 
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLW- 167
Query: 207 SIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYE 265
              Y +PE LL  +  S + D+WSLG I   +++    F   S   +   I     +  E
Sbjct: 168 ---YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 224
Query: 266 QTWKNISS-------------------------SAKQLISSLLTVDPNRRPSAQELLNHP 300
             W  ++S                           + L+S +L  DPN+R SA+  L HP
Sbjct: 225 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 284
Query: 301 W 301
           +
Sbjct: 285 F 285

>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 117/257 (45%), Gaps = 52/257 (20%)
Query: 89  LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVG---AA 145
           LV+ K V     H N+I L +V+  Q  +    ++    EL D  + Q   ME+     +
Sbjct: 76  LVLMKCVN----HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS 131
Query: 146 AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF 205
            ++ Q+  G+  LH A I+HRDLKP N +    + D  LKI+DFGL+   G +  +V   
Sbjct: 132 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMVPFV 188
Query: 206 GSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF-----IAQSNRQKQQM----- 255
            +  Y +PE +L        D+WS+G I+  ++ G   F     I Q N+  +Q+     
Sbjct: 189 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCP 248
Query: 256 ------------------IMAGEFSFYEQTWKNI------------SSSAKQLISSLLTV 285
                               AG +SF E+ + ++            +S A+ L+S +L +
Sbjct: 249 EFMKKLQPTVRTYVENRPKYAG-YSF-EKLFPDVLFPADSEHNKLKASQARDLLSKMLVI 306
Query: 286 DPNRRPSAQELLNHPWV 302
           D ++R S  E L HP++
Sbjct: 307 DASKRISVDEALQHPYI 323

>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/190 (34%), Positives = 99/190 (52%), Gaps = 15/190 (7%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      E+ N V+L+  L  G +L + IV   +  +     +I QI  G
Sbjct: 76  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCAKLTDDHVQFLIYQILRG 133
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A+I+HRDLKP N   L   ED  LKI+DFGL+      D + G   +  Y +PE
Sbjct: 134 LKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 188
Query: 215 ALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
            +L     +++ D+WS+G I+  LL+G   F    +  + ++I+    +   +  K ISS
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 248
Query: 274 -SAKQLISSL 282
            SA+  I SL
Sbjct: 249 ESARNYIQSL 258

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 77/297 (25%), Positives = 127/297 (42%), Gaps = 54/297 (18%)
Query: 11  EYEVTDI-----LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXX 65
           E E TDI     LG G +  V  G+ K    T  VA+KTL+                   
Sbjct: 7   EMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--VAVKTLKE------------------ 46
Query: 66  XQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCS 125
                          D +   E L    +++ +  HPN++ L  V   +   ++I+E  +
Sbjct: 47  ---------------DTMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIIIEFMT 90
Query: 126 GGELFDRIVAQERYMEVGAAAVIR---QIAEGLAALHQANIVHRDLKPENCLFLNDREDS 182
            G L D +    R  EV A  ++    QI+  +  L + N +HRDL   NCL     E+ 
Sbjct: 91  YGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENH 146
Query: 183 PLKIMDFGLSSV-EGYTDPV-VGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILLS 239
            +K+ DFGLS +  G T     G    I + +PE+L  ++ + KSD+W+ GV+L+ I   
Sbjct: 147 LVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 206
Query: 240 GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
           G  P+      Q  +++   E  +  +  +       +L+ +    +P+ RPS  E+
Sbjct: 207 GMSPYPGIDPSQVYELL---EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 260

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 104/241 (43%), Gaps = 55/241 (22%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGA---------AAVIRQI 151
           HPN++ L DV   +N ++L+ E              +++M+  A          + + Q+
Sbjct: 68  HPNIVKLLDVIHTENKLYLVFEFLHQD--------LKKFMDASALTGIPLPLIKSYLFQL 119
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEG-----YTDPVVGLFG 206
            +GLA  H   ++HRDLKP+N L      +  +K+ DFGL+   G     YT  VV L+ 
Sbjct: 120 LQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLW- 175
Query: 207 SIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYE 265
              Y +PE LL  +  S + D+WSLG I   +++    F   S   +   I     +  E
Sbjct: 176 ---YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 232
Query: 266 QTWKNISS-------------------------SAKQLISSLLTVDPNRRPSAQELLNHP 300
             W  ++S                           + L+S +L  DPN+R SA+  L HP
Sbjct: 233 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 292
Query: 301 W 301
           +
Sbjct: 293 F 293

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 101/225 (44%), Gaps = 9/225 (4%)
Query: 102 PNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQA 161
           P +   +  Y     + +I+E   GG   D ++      E   A ++R+I +GL  LH  
Sbjct: 77  PYITRYFGSYLKSTKLWIIMEYLGGGSALD-LLKPGPLEETYIATILREILKGLDYLHSE 135
Query: 162 NIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF-GSIDYVSPEALLQDR 220
             +HRD+K  N L     E   +K+ DFG++     T      F G+  +++PE + Q  
Sbjct: 136 RKIHRDIKAANVLL---SEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSA 192
Query: 221 ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLIS 280
              K+D+WSLG+    L  G PP    S+    +++     +         S   K+ + 
Sbjct: 193 YDFKADIWSLGITAIELAKGEPP---NSDLHPMRVLFLIPKNSPPTLEGQHSKPFKEFVE 249
Query: 281 SLLTVDPNRRPSAQELLNHPWVIGDSAKEEEMDAEIVSRLQSFNA 325
           + L  DP  RP+A+ELL H + I    K+     E++ R + + +
Sbjct: 250 ACLNKDPRFRPTAKELLKHKF-ITRYTKKTSFLTELIDRYKRWKS 293

>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 99/201 (49%), Gaps = 26/201 (12%)
Query: 121 LELCSGGELFDRIVAQERYMEVGAAA-VIRQIAEGLAALHQANIVHRDLKPENCLFLNDR 179
           +E C  G L+D I ++    +      + RQI E L+ +H   I+HRDLKP N +F++  
Sbjct: 94  MEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMN-IFID-- 150
Query: 180 EDSPLKIMDFGLS---------------SVEGYTDPVVGLFGSIDYVSPEAL-LQDRITS 223
           E   +KI DFGL+               ++ G +D +    G+  YV+ E L        
Sbjct: 151 ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNE 210
Query: 224 KSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEF--SFYEQTWKNISSSAKQLISS 281
           K DM+SLG+I + ++  +   + + N  K+   ++ EF   F +   K      K++I  
Sbjct: 211 KIDMYSLGIIFFEMIYPFSTGMERVNILKKLRSVSIEFPPDFDDNKMK----VEKKIIRL 266
Query: 282 LLTVDPNRRPSAQELLNHPWV 302
           L+  DPN+RP A+ LLN  W+
Sbjct: 267 LIDHDPNKRPGARTLLNSGWL 287

>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 102/226 (45%), Gaps = 23/226 (10%)
Query: 78  SVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE 137
           SV +  L  E L MR+       HP+++ L  V   +N V +I+ELC+ GEL  R   Q 
Sbjct: 53  SVREKFL-QEALTMRQF-----DHPHIVKLIGVI-TENPVWIIMELCTLGEL--RSFLQV 103
Query: 138 RYMEVGAAAVI---RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV 194
           R   +  A++I    Q++  LA L     VHRD+   N L         +K+ DFGLS  
Sbjct: 104 RKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV---SATDCVKLGDFGLSRY 160
Query: 195 ---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILLSGYPPFIAQSNR 250
                Y     G    I +++PE++   R TS SD+W  GV ++ IL+ G  PF    N 
Sbjct: 161 MEDSTYYKASKGKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 219
Query: 251 QKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
                I  GE         N   +   L++     DP+RRP   EL
Sbjct: 220 DVIGRIENGERLPMP---PNCPPTLYSLMTKCWAYDPSRRPRFTEL 262

>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/190 (33%), Positives = 98/190 (51%), Gaps = 15/190 (7%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      E+ N V+L+  L   G   + IV  ++  +     +I QI  G
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A+I+HRDLKP N   L   ED  LKI+D+GL+      D + G   +  Y +PE
Sbjct: 138 LKYIHSADIIHRDLKPSN---LAVNEDCELKILDYGLA--RHTDDEMTGYVATRWYRAPE 192
Query: 215 ALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
            +L     +++ D+WS+G I+  LL+G   F    +  + ++I+    +   +  K ISS
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 274 -SAKQLISSL 282
            SA+  I SL
Sbjct: 253 ESARNYIQSL 262

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 76/298 (25%), Positives = 127/298 (42%), Gaps = 56/298 (18%)
Query: 11  EYEVTDI-----LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXX 65
           E E TDI     LG G +  V  G+ K    T  VA+KTL+                   
Sbjct: 7   EMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--VAVKTLKE------------------ 46
Query: 66  XQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCS 125
                          D +   E L    +++ +  HPN++ L  V   +   ++I E  +
Sbjct: 47  ---------------DTMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMT 90
Query: 126 GGELFDRIVAQERYMEVGAAAVI---RQIAEGLAALHQANIVHRDLKPENCLFLNDREDS 182
            G L D +    R  EV A  ++    QI+  +  L + N +HRDL   NCL     E+ 
Sbjct: 91  YGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENH 146
Query: 183 PLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILL 238
            +K+ DFGLS +   + +T      F  I + +PE+L  ++ + KSD+W+ GV+L+ I  
Sbjct: 147 LVKVADFGLSRLMTGDTFTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
Query: 239 SGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
            G  P+      Q  +++   E  +  +  +       +L+ +    +P+ RPS  E+
Sbjct: 206 YGMSPYPGIDPSQVYELL---EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 260

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 123/285 (43%), Gaps = 51/285 (17%)
Query: 18  LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFFPTRKQV 77
           LG+G F  V  G   T   T +VAIKTL+  G+ +P  F                     
Sbjct: 26  LGQGCFGEVWMG---TWNGTTRVAIKTLKP-GTMSPEAF--------------------- 60
Query: 78  SVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ- 136
                    E  VM+K+      H  ++ LY V  ++  +++++E  S G L D +  + 
Sbjct: 61  -------LQEAQVMKKLR-----HEKLVQLYAVVSEEP-IYIVIEYMSKGSLLDFLKGEM 107
Query: 137 ERYMEVGAAA-VIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV- 194
            +Y+ +     +  QIA G+A + + N VHRDL+  N L     E+   K+ DFGL+ + 
Sbjct: 108 GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADFGLARLI 164
Query: 195 --EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQ 251
               YT      F  I + +PEA L  R T KSD+WS G++L  L + G  P+    NR+
Sbjct: 165 EDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 223
Query: 252 KQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
               +  G   +          S   L+      DP  RP+ + L
Sbjct: 224 VLDQVERG---YRMPCPPECPESLHDLMCQCWRKDPEERPTFEYL 265

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 97/211 (45%), Gaps = 20/211 (9%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           HPN+I L  V   +  + L++E   GG L +R+++ +R           QIA G+  LH 
Sbjct: 65  HPNIIALRGVCLKEPNLCLVMEFARGGPL-NRVLSGKRIPPDILVNWAVQIARGMNYLHD 123
Query: 161 ANIV---HRDLKPENCLFL-----NDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVS 212
             IV   HRDLK  N L L      D  +  LKI DFGL+  E +    +   G+  +++
Sbjct: 124 EAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR-EWHRTTKMSAAGAYAWMA 182
Query: 213 PEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNIS 272
           PE +     +  SD+WS GV+L+ LL+G  PF           +   + +        I 
Sbjct: 183 PEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLAL------PIP 236
Query: 273 SSAKQLISSLL----TVDPNRRPSAQELLNH 299
           S+  +  + L+      DP+ RPS   +L+ 
Sbjct: 237 STCPEPFAKLMEDCWNPDPHSRPSFTNILDQ 267

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 81/285 (28%), Positives = 122/285 (42%), Gaps = 51/285 (17%)
Query: 18  LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFFPTRKQV 77
           LG+G F  V  G   T   T +VAIKTL+  G+ +P  F                     
Sbjct: 26  LGQGCFGEVWMG---TWNGTTRVAIKTLKP-GTMSPEAF--------------------- 60
Query: 78  SVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ- 136
                    E  VM+KI      H  ++ LY V  ++  ++++ E  S G L D +  + 
Sbjct: 61  -------LQEAQVMKKIR-----HEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEM 107
Query: 137 ERYMEVGAAA-VIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV- 194
            +Y+ +     +  QIA G+A + + N VHRDL+  N L     E+   K+ DFGL+ + 
Sbjct: 108 GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADFGLARLI 164
Query: 195 --EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQ 251
               YT      F  I + +PEA L  R T KSD+WS G++L  L + G  P+    NR+
Sbjct: 165 EDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 223
Query: 252 KQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
               +  G   +          S   L+      DP  RP+ + L
Sbjct: 224 VLDQVERG---YRMPCPPECPESLHDLMCQCWRKDPEERPTFEYL 265

>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 102/226 (45%), Gaps = 23/226 (10%)
Query: 78  SVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE 137
           SV +  L  E L MR+       HP+++ L  V   +N V +I+ELC+ GEL  R   Q 
Sbjct: 433 SVREKFL-QEALTMRQF-----DHPHIVKLIGVI-TENPVWIIMELCTLGEL--RSFLQV 483
Query: 138 RYMEVGAAAVI---RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV 194
           R   +  A++I    Q++  LA L     VHRD+   N L         +K+ DFGLS  
Sbjct: 484 RKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV---SATDCVKLGDFGLSRY 540
Query: 195 ---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILLSGYPPFIAQSNR 250
                Y     G    I +++PE++   R TS SD+W  GV ++ IL+ G  PF    N 
Sbjct: 541 MEDSTYYKASKGKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 599
Query: 251 QKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
                I  GE         N   +   L++     DP+RRP   EL
Sbjct: 600 DVIGRIENGE---RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 642

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 103/241 (42%), Gaps = 55/241 (22%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGA---------AAVIRQI 151
           HPN++ L DV   +N ++L+ E              +++M+  A          + + Q+
Sbjct: 62  HPNIVKLLDVIHTENKLYLVFEFLHQD--------LKKFMDASALTGIPLPLIKSYLFQL 113
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEG-----YTDPVVGLFG 206
            +GLA  H   ++HRDLKPEN L      +  +K+ DFGL+   G     Y   VV L+ 
Sbjct: 114 LQGLAFCHSHRVLHRDLKPENLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLW- 169
Query: 207 SIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYE 265
              Y +PE LL  +  S + D+WSLG I   +++    F   S   +   I     +  E
Sbjct: 170 ---YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 226
Query: 266 QTWKNISS-------------------------SAKQLISSLLTVDPNRRPSAQELLNHP 300
             W  ++S                           + L+S +L  DPN+R SA+  L HP
Sbjct: 227 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 286
Query: 301 W 301
           +
Sbjct: 287 F 287

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 77/297 (25%), Positives = 127/297 (42%), Gaps = 54/297 (18%)
Query: 11  EYEVTDI-----LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXX 65
           E E TDI     LG G +  V  G+ K    T  VA+KTL+                   
Sbjct: 10  EMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--VAVKTLKE------------------ 49
Query: 66  XQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCS 125
                          D +   E L    +++ +  HPN++ L  V   +   ++I+E  +
Sbjct: 50  ---------------DTMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIIIEFMT 93
Query: 126 GGELFDRIVAQERYMEVGAAAVIR---QIAEGLAALHQANIVHRDLKPENCLFLNDREDS 182
            G L D +    R  EV A  ++    QI+  +  L + N +HRDL   NCL     E+ 
Sbjct: 94  YGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENH 149
Query: 183 PLKIMDFGLSSV-EGYTDPV-VGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILLS 239
            +K+ DFGLS +  G T     G    I + +PE+L  ++ + KSD+W+ GV+L+ I   
Sbjct: 150 LVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 209
Query: 240 GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
           G  P+      Q  +++   E  +  +  +       +L+ +    +P+ RPS  E+
Sbjct: 210 GMSPYPGIDLSQVYELL---EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 263

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 130/289 (44%), Gaps = 39/289 (13%)
Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIG 69
           +E E    +G+GGF +V +G  +   + + VAIK+L                      +G
Sbjct: 19  NEIEYEKQIGKGGFGLVHKG--RLVKDKSVVAIKSL---------------------ILG 55
Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
                 ++         E+ +M  +      HPN++ LY +    N   +++E    G+L
Sbjct: 56  DSEGETEMIEKFQEFQREVFIMSNLN-----HPNIVKLYGLM--HNPPRMVMEFVPCGDL 108
Query: 130 FDRIVAQERYMEVGAAA-VIRQIAEGLAALHQAN--IVHRDLKPENCLFLNDREDSPL-- 184
           + R++ +   ++      ++  IA G+  +   N  IVHRDL+  N    +  E++P+  
Sbjct: 109 YHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCA 168
Query: 185 KIMDFGLSSVEGYTDPVVGLFGSIDYVSPEAL--LQDRITSKSDMWSLGVILYILLSGYP 242
           K+ DFG S    ++  V GL G+  +++PE +   ++  T K+D +S  +ILY +L+G  
Sbjct: 169 KVADFGTSQQSVHS--VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEG 226
Query: 243 PFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRP 291
           PF   S  + + + M  E        ++     + +I    + DP +RP
Sbjct: 227 PFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRP 275

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 103/241 (42%), Gaps = 55/241 (22%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGA---------AAVIRQI 151
           HPN++ L DV   +N ++L+ E              +++M+  A          + + Q+
Sbjct: 63  HPNIVKLLDVIHTENKLYLVFEFLHQD--------LKKFMDASALTGIPLPLIKSYLFQL 114
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEG-----YTDPVVGLFG 206
            +GLA  H   ++HRDLKPEN L      +  +K+ DFGL+   G     Y   VV L+ 
Sbjct: 115 LQGLAFCHSHRVLHRDLKPENLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLW- 170
Query: 207 SIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYE 265
              Y +PE LL  +  S + D+WSLG I   +++    F   S   +   I     +  E
Sbjct: 171 ---YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 227
Query: 266 QTWKNISS-------------------------SAKQLISSLLTVDPNRRPSAQELLNHP 300
             W  ++S                           + L+S +L  DPN+R SA+  L HP
Sbjct: 228 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 287
Query: 301 W 301
           +
Sbjct: 288 F 288

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 104/241 (43%), Gaps = 55/241 (22%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGA---------AAVIRQI 151
           HPN++ L DV   +N ++L+ E              +++M+  A          + + Q+
Sbjct: 61  HPNIVKLLDVIHTENKLYLVFEFLHQD--------LKKFMDASALTGIPLPLIKSYLFQL 112
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS-----SVEGYTDPVVGLFG 206
            +GL+  H   ++HRDLKP+N L      +  +K+ DFGL+      V  YT  VV L+ 
Sbjct: 113 LQGLSFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLW- 168
Query: 207 SIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYE 265
              Y +PE LL  +  S + D+WSLG I   +++    F   S   +   I     +  E
Sbjct: 169 ---YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 225
Query: 266 QTWKNISS-------------------------SAKQLISSLLTVDPNRRPSAQELLNHP 300
             W  ++S                           + L+S +L  DPN+R SA+  L HP
Sbjct: 226 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 285
Query: 301 W 301
           +
Sbjct: 286 F 286

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 122/285 (42%), Gaps = 51/285 (17%)
Query: 18  LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFFPTRKQV 77
           LG+G F  V  G   T   T +VAIKTL+  G+ +P  F                     
Sbjct: 17  LGQGCFGEVWMG---TWNGTTRVAIKTLKP-GTMSPEAF--------------------- 51
Query: 78  SVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ- 136
                    E  VM+K+      H  ++ LY V  ++  ++++ E  S G L D +  + 
Sbjct: 52  -------LQEAQVMKKLR-----HEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEM 98
Query: 137 ERYMEVGAAA-VIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV- 194
            +Y+ +     +  QIA G+A + + N VHRDL+  N L     E+   K+ DFGL+ + 
Sbjct: 99  GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADFGLARLI 155
Query: 195 --EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQ 251
               YT      F  I + +PEA L  R T KSD+WS G++L  L + G  P+    NR+
Sbjct: 156 EDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 214
Query: 252 KQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
               +  G   +          S   L+      DP  RP+ + L
Sbjct: 215 VLDQVERG---YRMPCPPECPESLHDLMCQCWRKDPEERPTFEYL 256

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 122/285 (42%), Gaps = 51/285 (17%)
Query: 18  LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFFPTRKQV 77
           LG+G F  V  G   T   T +VAIKTL+  G+ +P  F                     
Sbjct: 26  LGQGCFGEVWMG---TWNGTTRVAIKTLKP-GTMSPEAF--------------------- 60
Query: 78  SVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ- 136
                    E  VM+K+      H  ++ LY V  ++  ++++ E  S G L D +  + 
Sbjct: 61  -------LQEAQVMKKLR-----HEKLVQLYAVVSEEP-IYIVCEYMSKGSLLDFLKGEM 107
Query: 137 ERYMEVGAAA-VIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV- 194
            +Y+ +     +  QIA G+A + + N VHRDL+  N L     E+   K+ DFGL+ + 
Sbjct: 108 GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADFGLARLI 164
Query: 195 --EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQ 251
               YT      F  I + +PEA L  R T KSD+WS G++L  L + G  P+    NR+
Sbjct: 165 EDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 223
Query: 252 KQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
               +  G   +          S   L+      DP  RP+ + L
Sbjct: 224 VLDQVERG---YRMPCPPECPESLHDLMCQCWRKDPEERPTFEYL 265

>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 57/190 (30%), Positives = 100/190 (52%), Gaps = 14/190 (7%)
Query: 104 VIDLYDVYEDQNGVHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQAN 162
           +  L+  ++D+N ++L+++   GG+L   +   +++  E  A   I ++   + ++HQ +
Sbjct: 136 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLH 195
Query: 163 IVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVG---LFGSIDYVSPEAL--L 217
            VHRD+KP+N L      +  +++ DFG S ++   D  V      G+ DY+SPE L  +
Sbjct: 196 YVHRDIKPDNVLL---DVNGHIRLADFG-SCLKMNDDGTVQSSVAVGTPDYISPEILQAM 251
Query: 218 QD---RITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSF-YEQTWKNISS 273
           +D   +   + D WSLGV +Y +L G  PF A+S  +    IM  E  F +     ++S 
Sbjct: 252 EDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSE 311
Query: 274 SAKQLISSLL 283
            AK LI  L+
Sbjct: 312 EAKDLIQRLI 321

>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312

Iteration: 1
 Score = 76.6 bits (187), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 96/208 (46%), Gaps = 18/208 (8%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE--RYMEVGAAAVIRQIAEGLAAL 158
           HPNVI L  V      V +I E    G L D  + Q   ++  +    ++R IA G+  L
Sbjct: 93  HPNVIHLEGVVTKSTPVMIITEFMENGSL-DSFLRQNDGQFTVIQLVGMLRGIAAGMKYL 151
Query: 159 HQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS-------SVEGYTDPVVGLFGSIDYV 211
              N VHRDL   N L      +   K+ DFGLS       S   YT  + G    I + 
Sbjct: 152 ADMNYVHRDLAARNILV---NSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKI-PIRWT 207
Query: 212 SPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKN 270
           +PEA+   + TS SD+WS G++++ ++S G  P+   +N   Q +I A E  +      +
Sbjct: 208 APEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTN---QDVINAIEQDYRLPPPMD 264
Query: 271 ISSSAKQLISSLLTVDPNRRPSAQELLN 298
             S+  QL+      D N RP   +++N
Sbjct: 265 CPSALHQLMLDCWQKDRNHRPKFGQIVN 292

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 76.6 bits (187), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 123/285 (43%), Gaps = 51/285 (17%)
Query: 18  LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFFPTRKQV 77
           LG+G F  V  G   T   T +VAIKTL+  G+ +P  F                     
Sbjct: 26  LGQGCFGEVWMG---TWNGTTRVAIKTLKP-GTMSPEAF--------------------- 60
Query: 78  SVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ- 136
                    E  VM+K+      H  ++ LY V  ++  +++++E  S G L D +  + 
Sbjct: 61  -------LQEAQVMKKLR-----HEKLVQLYAVVSEEP-IYIVMEYMSKGCLLDFLKGEM 107
Query: 137 ERYMEVGAAA-VIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV- 194
            +Y+ +     +  QIA G+A + + N VHRDL+  N L     E+   K+ DFGL+ + 
Sbjct: 108 GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADFGLARLI 164
Query: 195 --EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQ 251
               YT      F  I + +PEA L  R T KSD+WS G++L  L + G  P+    NR+
Sbjct: 165 EDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 223
Query: 252 KQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
               +  G   +          S   L+      DP  RP+ + L
Sbjct: 224 VLDQVERG---YRMPCPPECPESLHDLMCQCWRKDPEERPTFEYL 265

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 76.6 bits (187), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 104/241 (43%), Gaps = 55/241 (22%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGA---------AAVIRQI 151
           HPN++ L DV   +N ++L+ E  S        +  + +M+  A          + + Q+
Sbjct: 63  HPNIVKLLDVIHTENKLYLVFEFLS--------MDLKDFMDASALTGIPLPLIKSYLFQL 114
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEG-----YTDPVVGLFG 206
            +GLA  H   ++HRDLKP+N L      +  +K+ DFGL+   G     Y   VV L+ 
Sbjct: 115 LQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLW- 170
Query: 207 SIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYE 265
              Y +PE LL  +  S + D+WSLG I   +++    F   S   +   I     +  E
Sbjct: 171 ---YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 227
Query: 266 QTWKNISS-------------------------SAKQLISSLLTVDPNRRPSAQELLNHP 300
             W  ++S                           + L+S +L  DPN+R SA+  L HP
Sbjct: 228 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 287
Query: 301 W 301
           +
Sbjct: 288 F 288

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score = 76.6 bits (187), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/263 (25%), Positives = 113/263 (42%), Gaps = 42/263 (15%)
Query: 87  EILVMRKIVENVSPHPNVIDLYDV-----YEDQNGVHLILELCSGGELFDRIVAQERYME 141
           E+ V+R +      HPNV+ L+DV      + +  + L+ E        D     ++  E
Sbjct: 61  EVAVLRHL--ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ----DLTTYLDKVPE 114
Query: 142 VGAAA-----VIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEG 196
            G        ++ Q+  GL  LH   +VHRDLKP+N L  +  +   +K+ DFGL+ +  
Sbjct: 115 PGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQ---IKLADFGLARIYS 171
Query: 197 YTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMI 256
           +   +  +  ++ Y +PE LLQ    +  D+WS+G I   +    P F   S+  +   I
Sbjct: 172 FQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKI 231
Query: 257 -----MAGEFSF------------------YEQTWKNISSSAKQLISSLLTVDPNRRPSA 293
                + GE  +                   E+   +I    K L+   LT +P +R SA
Sbjct: 232 LDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISA 291
Query: 294 QELLNHPWVIGDSAKEEEMDAEI 316
              L+HP+       +E +D+ +
Sbjct: 292 YSALSHPYFQDLERCKENLDSHL 314

>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 76.6 bits (187), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 118/257 (45%), Gaps = 52/257 (20%)
Query: 89  LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVG---AA 145
           LV+ K V     H N+I L +V+  Q  +    ++    EL D  ++Q   ME+     +
Sbjct: 74  LVLMKCVN----HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMS 129
Query: 146 AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF 205
            ++ Q+  G+  LH A I+HRDLKP N +    + D+ LKI+DFGL+   G +  +    
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDATLKILDFGLARTAGTSFMMTPYV 186
Query: 206 GSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF-----IAQSNRQKQQM----- 255
            +  Y +PE +L        D+WS+G I+  ++ G   F     I Q N+  +Q+     
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSP 246
Query: 256 ------------------IMAGEFSFYEQTWKNI------------SSSAKQLISSLLTV 285
                               AG +SF E+ + ++            +S A+ L+S +L +
Sbjct: 247 EFMKKLQPTVRTYVENRPKYAG-YSF-EKLFPDVLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 286 DPNRRPSAQELLNHPWV 302
           D ++R S  E L HP++
Sbjct: 305 DASKRISVDEALQHPYI 321

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 76.6 bits (187), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 104/241 (43%), Gaps = 55/241 (22%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGA---------AAVIRQI 151
           HPN++ L DV   +N ++L+ E  S        +  + +M+  A          + + Q+
Sbjct: 64  HPNIVKLLDVIHTENKLYLVFEFLS--------MDLKDFMDASALTGIPLPLIKSYLFQL 115
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEG-----YTDPVVGLFG 206
            +GLA  H   ++HRDLKP+N L      +  +K+ DFGL+   G     Y   VV L+ 
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLW- 171
Query: 207 SIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYE 265
              Y +PE LL  +  S + D+WSLG I   +++    F   S   +   I     +  E
Sbjct: 172 ---YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 228
Query: 266 QTWKNISS-------------------------SAKQLISSLLTVDPNRRPSAQELLNHP 300
             W  ++S                           + L+S +L  DPN+R SA+  L HP
Sbjct: 229 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 288
Query: 301 W 301
           +
Sbjct: 289 F 289

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score = 76.6 bits (187), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 108/239 (45%), Gaps = 42/239 (17%)
Query: 101 HPNVIDLYDVY-----EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGL 155
           H N+I + D+      E    V+L+  L  G +L+ +++  +          + QI  GL
Sbjct: 100 HENIIGINDIIRAPTIEQMKDVYLVTHLM-GADLY-KLLKTQHLSNDHICYFLYQILRGL 157
Query: 156 AALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV----EGYTDPVVGLFGSIDYV 211
             +H AN++HRDLKP N L LN   D  LKI DFGL+ V      +T  +     +  Y 
Sbjct: 158 KYIHSANVLHRDLKPSN-LLLNTTXD--LKICDFGLARVADPDHDHTGFLTEYVATRWYR 214
Query: 212 SPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIM------------- 257
           +PE +L  +  +KS D+WS+G IL  +LS  P F  +    +   I+             
Sbjct: 215 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 274
Query: 258 -----AGEFSF---------YEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
                A  +           + + + N  S A  L+  +LT +P++R   ++ L HP++
Sbjct: 275 IINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 333

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 76.6 bits (187), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 130/289 (44%), Gaps = 39/289 (13%)
Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIG 69
           +E E    +G+GGF +V +G  +   + + VAIK+L                      +G
Sbjct: 19  NEIEYEKQIGKGGFGLVHKG--RLVKDKSVVAIKSL---------------------ILG 55
Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
                 ++         E+ +M  +      HPN++ LY +    N   +++E    G+L
Sbjct: 56  DSEGETEMIEKFQEFQREVFIMSNLN-----HPNIVKLYGLM--HNPPRMVMEFVPCGDL 108
Query: 130 FDRIVAQERYMEVGAAA-VIRQIAEGLAALHQAN--IVHRDLKPENCLFLNDREDSPL-- 184
           + R++ +   ++      ++  IA G+  +   N  IVHRDL+  N    +  E++P+  
Sbjct: 109 YHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCA 168
Query: 185 KIMDFGLSSVEGYTDPVVGLFGSIDYVSPEAL--LQDRITSKSDMWSLGVILYILLSGYP 242
           K+ DF LS    ++  V GL G+  +++PE +   ++  T K+D +S  +ILY +L+G  
Sbjct: 169 KVADFSLSQQSVHS--VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEG 226
Query: 243 PFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRP 291
           PF   S  + + + M  E        ++     + +I    + DP +RP
Sbjct: 227 PFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRP 275

>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433

Iteration: 1
 Score = 76.6 bits (187), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 57/190 (30%), Positives = 100/190 (52%), Gaps = 14/190 (7%)
Query: 104 VIDLYDVYEDQNGVHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQAN 162
           +  L+  ++D+N ++L+++   GG+L   +   +++  E  A   I ++   + ++HQ +
Sbjct: 152 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLH 211
Query: 163 IVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVG---LFGSIDYVSPEAL--L 217
            VHRD+KP+N L      +  +++ DFG S ++   D  V      G+ DY+SPE L  +
Sbjct: 212 YVHRDIKPDNVLL---DVNGHIRLADFG-SCLKMNDDGTVQSSVAVGTPDYISPEILQAM 267
Query: 218 QD---RITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSF-YEQTWKNISS 273
           +D   +   + D WSLGV +Y +L G  PF A+S  +    IM  E  F +     ++S 
Sbjct: 268 EDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSE 327
Query: 274 SAKQLISSLL 283
            AK LI  L+
Sbjct: 328 EAKDLIQRLI 337

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 76.6 bits (187), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 89/196 (45%), Gaps = 8/196 (4%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGEL---FDRIVAQERYM-EVGAAAVIRQIAEGLA 156
           HPNVI  Y  + + N ++++LEL   G+L         Q+R + E        Q+   L 
Sbjct: 91  HPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALE 150
Query: 157 ALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV-EGYTDPVVGLFGSIDYVSPEA 215
            +H   ++HRD+KP N +F+       +K+ D GL       T     L G+  Y+SPE 
Sbjct: 151 HMHSRRVMHRDIKPAN-VFIT--ATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPER 207
Query: 216 LLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSA 275
           + ++    KSD+WSLG +LY + +   PF               +  +      + S   
Sbjct: 208 IHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEEL 267
Query: 276 KQLISSLLTVDPNRRP 291
           +QL++  +  DP +RP
Sbjct: 268 RQLVNMCINPDPEKRP 283

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 76.6 bits (187), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 122/285 (42%), Gaps = 51/285 (17%)
Query: 18  LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFFPTRKQV 77
           LG+G F  V  G   T   T +VAIKTL+  G+ +P  F                     
Sbjct: 15  LGQGCFGEVWMG---TWNGTTRVAIKTLKP-GTMSPEAF--------------------- 49
Query: 78  SVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ- 136
                    E  VM+K+      H  ++ LY V  ++  ++++ E  S G L D +  + 
Sbjct: 50  -------LQEAQVMKKLR-----HEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEM 96
Query: 137 ERYMEVGAAA-VIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV- 194
            +Y+ +     +  QIA G+A + + N VHRDL+  N L     E+   K+ DFGL+ + 
Sbjct: 97  GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADFGLARLI 153
Query: 195 --EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQ 251
               YT      F  I + +PEA L  R T KSD+WS G++L  L + G  P+    NR+
Sbjct: 154 EDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 212
Query: 252 KQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
               +  G   +          S   L+      DP  RP+ + L
Sbjct: 213 VLDQVERG---YRMPCPPECPESLHDLMCQCWRKDPEERPTFEYL 254

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 76.6 bits (187), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 122/285 (42%), Gaps = 51/285 (17%)
Query: 18  LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFFPTRKQV 77
           LG+G F  V  G   T   T +VAIKTL+  G+ +P  F                     
Sbjct: 26  LGQGCFGEVWMG---TWNGTTRVAIKTLKP-GTMSPEAF--------------------- 60
Query: 78  SVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ- 136
                    E  VM+K+      H  ++ LY V  ++  ++++ E  S G L D +  + 
Sbjct: 61  -------LQEAQVMKKLR-----HEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEM 107
Query: 137 ERYMEVGAAA-VIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV- 194
            +Y+ +     +  QIA G+A + + N VHRDL+  N L     E+   K+ DFGL+ + 
Sbjct: 108 GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADFGLARLI 164
Query: 195 --EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQ 251
               YT      F  I + +PEA L  R T KSD+WS G++L  L + G  P+    NR+
Sbjct: 165 EDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 223
Query: 252 KQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
               +  G   +          S   L+      DP  RP+ + L
Sbjct: 224 VLDQVERG---YRMPCPPECPESLHDLMCQCWRKDPEERPTFEYL 265

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 76.6 bits (187), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 122/284 (42%), Gaps = 49/284 (17%)
Query: 18  LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFFPTRKQV 77
           LG+G F  V  G   T   T +VAIKTL+  G+ +P  F                     
Sbjct: 26  LGQGCFGEVWMG---TWNGTTRVAIKTLKP-GTMSPEAF--------------------- 60
Query: 78  SVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ- 136
                    E  VM+K+      H  ++ LY V  ++  +++++E  S G L D +  + 
Sbjct: 61  -------LQEAQVMKKLR-----HEKLVQLYAVVSEEP-IYIVIEYMSKGSLLDFLKGEM 107
Query: 137 ERYMEVGAAA-VIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV- 194
            +Y+ +     +  QIA G+A + + N VHRDL+  N L     E+   K+ DFGL+ + 
Sbjct: 108 GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADFGLARLI 164
Query: 195 -EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQK 252
            +       G    I + +PEA L  R T KSD+WS G++L  L + G  P+    NR+ 
Sbjct: 165 EDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 224
Query: 253 QQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
              +  G   +          S   L+      DP  RP+ + L
Sbjct: 225 LDQVERG---YRMPCPPECPESLHDLMCQCWRKDPEERPTFEYL 265

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 76.6 bits (187), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 82/332 (24%), Positives = 136/332 (40%), Gaps = 88/332 (26%)
Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIG 69
           + ++  + +G G + VV +   K  GE   VA+K +R    T   G P            
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEV--VALKKIRLDTETE--GVP------------ 46
Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
                     S A+   EI +++++      HPN++ L DV   +N ++L+ E       
Sbjct: 47  ----------STAI--REISLLKEL-----NHPNIVKLLDVIHTENKLYLVFEFLHQD-- 87
Query: 130 FDRIVAQERYMEVGA---------AAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRE 180
                  +++M+  A          + + Q+ +GLA  H   ++HRDLKP+N L      
Sbjct: 88  ------LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI---NT 138
Query: 181 DSPLKIMDFGLSSVEG-----YTDPVVGLFGSIDYVSPEALLQDRITSKS-DMWSLGVIL 234
           +  +K+ DFGL+   G     Y   VV L+    Y +PE LL  +  S + D+WSLG I 
Sbjct: 139 EGAIKLADFGLARAFGVPVRTYXHEVVTLW----YRAPEILLGCKYYSTAVDIWSLGCIF 194
Query: 235 YILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS--------------------- 273
             +++    F   S   +   I     +  E  W  ++S                     
Sbjct: 195 AEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVP 254
Query: 274 ----SAKQLISSLLTVDPNRRPSAQELLNHPW 301
                 + L+S +L  DPN+R SA+  L HP+
Sbjct: 255 PLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 286

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 76.3 bits (186), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 77/297 (25%), Positives = 126/297 (42%), Gaps = 54/297 (18%)
Query: 11  EYEVTDI-----LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXX 65
           E E TDI     LG G +  V  G+ K    T  VA+KTL+                   
Sbjct: 14  EMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--VAVKTLKE------------------ 53
Query: 66  XQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCS 125
                          D +   E L    +++ +  HPN++ L  V   +   ++I E  +
Sbjct: 54  ---------------DTMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMT 97
Query: 126 GGELFDRIVAQERYMEVGAAAVIR---QIAEGLAALHQANIVHRDLKPENCLFLNDREDS 182
            G L D +    R  EV A  ++    QI+  +  L + N +HRDL   NCL     E+ 
Sbjct: 98  YGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENH 153
Query: 183 PLKIMDFGLSSV-EGYTDPV-VGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILLS 239
            +K+ DFGLS +  G T     G    I + +PE+L  ++ + KSD+W+ GV+L+ I   
Sbjct: 154 LVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 213
Query: 240 GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
           G  P+      Q  +++   E  +  +  +       +L+ +    +P+ RPS  E+
Sbjct: 214 GMSPYPGIDLSQVYELL---EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 76/298 (25%), Positives = 127/298 (42%), Gaps = 56/298 (18%)
Query: 11  EYEVTDI-----LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXX 65
           E E TDI     LG G +  V  G+ K    T  VA+KTL+                   
Sbjct: 216 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--VAVKTLKE------------------ 255
Query: 66  XQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCS 125
                          D +   E L    +++ +  HPN++ L  V   +   ++I E  +
Sbjct: 256 ---------------DTMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMT 299
Query: 126 GGELFDRIVAQERYMEVGAAAVI---RQIAEGLAALHQANIVHRDLKPENCLFLNDREDS 182
            G L D +    R  EV A  ++    QI+  +  L + N +HR+L   NCL     E+ 
Sbjct: 300 YGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLV---GENH 355
Query: 183 PLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILL 238
            +K+ DFGLS +   + YT      F  I + +PE+L  ++ + KSD+W+ GV+L+ I  
Sbjct: 356 LVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 414
Query: 239 SGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
            G  P+      Q  +++   E  +  +  +       +L+ +    +P+ RPS  E+
Sbjct: 415 YGMSPYPGIDLSQVYELL---EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 469

>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 116/257 (45%), Gaps = 52/257 (20%)
Query: 89  LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVG---AA 145
           LV+ K V     H N+I L +V+  Q  +    ++    EL D  + Q   ME+     +
Sbjct: 75  LVLMKCVN----HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS 130
Query: 146 AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF 205
            ++ Q+  G+  LH A I+HRDLKP N +    + D  LKI+DFGL+   G +  +    
Sbjct: 131 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYV 187
Query: 206 GSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF-----IAQSNRQKQQM----- 255
            +  Y +PE +L        D+WS+G I+  ++ G   F     I Q N+  +Q+     
Sbjct: 188 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCP 247
Query: 256 ------------------IMAGEFSFYEQTWKNI------------SSSAKQLISSLLTV 285
                               AG +SF E+ + ++            +S A+ L+S +L +
Sbjct: 248 EFMKKLQPTVRTYVENRPKYAG-YSF-EKLFPDVLFPADSEHNKLKASQARDLLSKMLVI 305
Query: 286 DPNRRPSAQELLNHPWV 302
           D ++R S  E L HP++
Sbjct: 306 DASKRISVDEALQHPYI 322

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 103/241 (42%), Gaps = 55/241 (22%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGA---------AAVIRQI 151
           HPN++ L DV   +N ++L+ E              +++M+  A          + + Q+
Sbjct: 62  HPNIVKLLDVIHTENKLYLVFEFLHQD--------LKKFMDASALTGIPLPLIKSYLFQL 113
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEG-----YTDPVVGLFG 206
            +GLA  H   ++HRDLKP+N L      +  +K+ DFGL+   G     Y   VV L+ 
Sbjct: 114 LQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLW- 169
Query: 207 SIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYE 265
              Y +PE LL  +  S + D+WSLG I   +++    F   S   +   I     +  E
Sbjct: 170 ---YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 226
Query: 266 QTWKNISS-------------------------SAKQLISSLLTVDPNRRPSAQELLNHP 300
             W  ++S                           + L+S +L  DPN+R SA+  L HP
Sbjct: 227 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 286
Query: 301 W 301
           +
Sbjct: 287 F 287

>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 64/190 (33%), Positives = 97/190 (51%), Gaps = 15/190 (7%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      E+ N V+L+  L   G   + IV  ++  +     +I QI  G
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A+I+HRDLKP N   L   ED  LKI+ FGL+      D + G   +  Y +PE
Sbjct: 138 LKYIHSADIIHRDLKPSN---LAVNEDCELKILGFGLA--RHTDDEMTGYVATRWYRAPE 192
Query: 215 ALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
            +L     +++ D+WS+G I+  LL+G   F    +  + ++I+    +   +  K ISS
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 274 -SAKQLISSL 282
            SA+  I SL
Sbjct: 253 ESARNYIQSL 262

>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 117/257 (45%), Gaps = 52/257 (20%)
Query: 89  LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVG---AA 145
           LV+ K V     H N+I L +V+  Q  +    ++    EL D  ++Q   ME+     +
Sbjct: 74  LVLMKCVN----HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMS 129
Query: 146 AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF 205
            ++ Q+  G+  LH A I+HRDLKP N +    + D  LKI+DFGL+   G +  +    
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYV 186
Query: 206 GSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF-----IAQSNRQKQQM----- 255
            +  Y +PE +L        D+WS+G I+  ++ G   F     I Q N+  +Q+     
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSP 246
Query: 256 ------------------IMAGEFSFYEQTWKNI------------SSSAKQLISSLLTV 285
                               AG +SF E+ + ++            +S A+ L+S +L +
Sbjct: 247 EFMKKLQPTVRTYVENRPKYAG-YSF-EKLFPDVLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 286 DPNRRPSAQELLNHPWV 302
           D ++R S  E L HP++
Sbjct: 305 DASKRISVDEALQHPYI 321

>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 84/355 (23%), Positives = 145/355 (40%), Gaps = 84/355 (23%)
Query: 8   LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQ 67
           ++ ++++  +LG G + VV     K  GE   VAIK +       P+  P          
Sbjct: 9   ISSDFQLKSLLGEGAYGVVCSATHKPTGEI--VAIKKIE------PFDKP---------- 50
Query: 68  IGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDV-----YEDQNGVHLILE 122
                          L     L   KI+++   H N+I ++++     +E+ N V++I E
Sbjct: 51  ---------------LFALRTLREIKILKHFK-HENIITIFNIQRPDSFENFNEVYIIQE 94
Query: 123 LCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDS 182
           L        R+++ +   +      I Q    +  LH +N++HRDLKP N L +N   D 
Sbjct: 95  LMQTD--LHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSN-LLINSNCD- 150
Query: 183 PLKIMDFGLS-----SVEGYTDPVVGLFGSIDYV------SPEALLQDRITSKS-DMWSL 230
            LK+ DFGL+     S    ++P     G  +YV      +PE +L     S++ D+WS 
Sbjct: 151 -LKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSC 209
Query: 231 GVILYILLSGYPPFIAQSNRQKQQMIM-------------------AGEF---------S 262
           G IL  L    P F  +  R +  +I                    A E+         +
Sbjct: 210 GCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAA 269
Query: 263 FYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAKEEEMDAEIV 317
             E+ +  ++     L+  +L  DP +R +A+E L HP++       +E + E +
Sbjct: 270 PLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDPNDEPEGEPI 324

>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 116/258 (44%), Gaps = 54/258 (20%)
Query: 89  LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVG---AA 145
           LV+ K V     H N+I L +V+  Q  +    ++    EL D  + Q   ME+     +
Sbjct: 79  LVLMKCVN----HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS 134
Query: 146 AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF 205
            ++ Q+  G+  LH A I+HRDLKP N +    + D  LKI+DFGL+   G +  +    
Sbjct: 135 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYV 191
Query: 206 GSIDYVSPEALLQDRITSKSDMWSLGVIL------YILLSGYPPFIAQSNRQKQQM---- 255
            +  Y +PE +L        D+WS+G I+       IL  G   +I Q N+  +Q+    
Sbjct: 192 VTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGR-DYIDQWNKVIEQLGTPC 250
Query: 256 -------------------IMAGEFSFYEQTWKNI------------SSSAKQLISSLLT 284
                                AG +SF E+ + ++            +S A+ L+S +L 
Sbjct: 251 PEFMKKLQPTVRTYVENRPKYAG-YSF-EKLFPDVLFPADSEHNKLKASQARDLLSKMLV 308
Query: 285 VDPNRRPSAQELLNHPWV 302
           +D ++R S  E L HP++
Sbjct: 309 IDASKRISVDEALQHPYI 326

>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 116/257 (45%), Gaps = 52/257 (20%)
Query: 89  LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVG---AA 145
           LV+ K V     H N+I L +V+  Q  +    ++    EL D  + Q   ME+     +
Sbjct: 74  LVLMKCVN----HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS 129
Query: 146 AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF 205
            ++ Q+  G+  LH A I+HRDLKP N +    + D  LKI+DFGL+   G +  +    
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYV 186
Query: 206 GSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF-----IAQSNRQKQQM----- 255
            +  Y +PE +L        D+WS+G I+  ++ G   F     I Q N+  +Q+     
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCP 246
Query: 256 ------------------IMAGEFSFYEQTWKNI------------SSSAKQLISSLLTV 285
                               AG +SF E+ + ++            +S A+ L+S +L +
Sbjct: 247 EFMKKLQPTVRTYVENRPKYAG-YSF-EKLFPDVLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 286 DPNRRPSAQELLNHPWV 302
           D ++R S  E L HP++
Sbjct: 305 DASKRISVDEALQHPYI 321

>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 116/257 (45%), Gaps = 52/257 (20%)
Query: 89  LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVG---AA 145
           LV+ K V     H N+I L +V+  Q  +    ++    EL D  + Q   ME+     +
Sbjct: 74  LVLMKCVN----HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS 129
Query: 146 AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF 205
            ++ Q+  G+  LH A I+HRDLKP N +    + D  LKI+DFGL+   G +  +    
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYV 186
Query: 206 GSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF-----IAQSNRQKQQM----- 255
            +  Y +PE +L        D+WS+G I+  ++ G   F     I Q N+  +Q+     
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSP 246
Query: 256 ------------------IMAGEFSFYEQTWKNI------------SSSAKQLISSLLTV 285
                               AG +SF E+ + ++            +S A+ L+S +L +
Sbjct: 247 EFMKKLQPTVRTYVENRPKYAG-YSF-EKLFPDVLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 286 DPNRRPSAQELLNHPWV 302
           D ++R S  E L HP++
Sbjct: 305 DASKRISVDEALQHPYI 321

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 103/241 (42%), Gaps = 55/241 (22%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGA---------AAVIRQI 151
           HPN++ L DV   +N ++L+ E              +++M+  A          + + Q+
Sbjct: 61  HPNIVKLLDVIHTENKLYLVFEFLHQD--------LKKFMDASALTGIPLPLIKSYLFQL 112
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS-----SVEGYTDPVVGLFG 206
            +GLA  H   ++HRDLKP+N L      +  +K+ DFGL+      V  Y   VV L+ 
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLW- 168
Query: 207 SIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYE 265
              Y +PE LL  +  S + D+WSLG I   +++    F   S   +   I     +  E
Sbjct: 169 ---YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 225
Query: 266 QTWKNISS-------------------------SAKQLISSLLTVDPNRRPSAQELLNHP 300
             W  ++S                           + L+S +L  DPN+R SA+  L HP
Sbjct: 226 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 285
Query: 301 W 301
           +
Sbjct: 286 F 286

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 103/241 (42%), Gaps = 55/241 (22%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGA---------AAVIRQI 151
           HPN++ L DV   +N ++L+ E              +++M+  A          + + Q+
Sbjct: 61  HPNIVKLLDVIHTENKLYLVFEFLHQD--------LKKFMDASALTGIPLPLIKSYLFQL 112
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEG-----YTDPVVGLFG 206
            +GLA  H   ++HRDLKP+N L      +  +K+ DFGL+   G     Y   VV L+ 
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLW- 168
Query: 207 SIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYE 265
              Y +PE LL  +  S + D+WSLG I   +++    F   S   +   I     +  E
Sbjct: 169 ---YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 225
Query: 266 QTWKNISS-------------------------SAKQLISSLLTVDPNRRPSAQELLNHP 300
             W  ++S                           + L+S +L  DPN+R SA+  L HP
Sbjct: 226 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 285
Query: 301 W 301
           +
Sbjct: 286 F 286

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 107/249 (42%), Gaps = 42/249 (16%)
Query: 86  NEILVMRKIVENVSPHPNVIDLYDV-----YEDQNGVHLILELCSGGELFDRIVAQERYM 140
            E+ V+R +      HPNV+ L+DV      + +  + L+ E        D     ++  
Sbjct: 60  REVAVLRHL--ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ----DLTTYLDKVP 113
Query: 141 EVGAAA-----VIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVE 195
           E G        ++ Q+  GL  LH   +VHRDLKP+N L  +  +   +K+ DFGL+ + 
Sbjct: 114 EPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQ---IKLADFGLARIY 170
Query: 196 GYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQM 255
            +   +  +  ++ Y +PE LLQ    +  D+WS+G I   +    P F   S+  +   
Sbjct: 171 SFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGK 230
Query: 256 I-----MAGEFSF------------------YEQTWKNISSSAKQLISSLLTVDPNRRPS 292
           I     + GE  +                   E+   +I    K L+   LT +P +R S
Sbjct: 231 ILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRIS 290
Query: 293 AQELLNHPW 301
           A   L+HP+
Sbjct: 291 AYSALSHPY 299

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 137/332 (41%), Gaps = 88/332 (26%)
Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIG 69
           + ++  + +G G + VV +   K  GE   VA+K +R    T   G P            
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEV--VALKKIRLDTETE--GVP------------ 46
Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
                     S A+   EI +++++      HPN++ L DV   +N ++L+ E     +L
Sbjct: 47  ----------STAI--REISLLKEL-----NHPNIVKLLDVIHTENKLYLVFEFLHQ-DL 88
Query: 130 FDRIVAQERYMEVGA---------AAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRE 180
            D       +M+  A          + + Q+ +GLA  H   ++HRDLKPEN L      
Sbjct: 89  KD-------FMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLI---NT 138
Query: 181 DSPLKIMDFGLS-----SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKS-DMWSLGVIL 234
           +  +K+ DFGL+      V  Y   VV L+    Y +PE LL  +  S + D+WSLG I 
Sbjct: 139 EGAIKLADFGLARAFGVPVRTYXHEVVTLW----YRAPEILLGCKYYSTAVDIWSLGCIF 194
Query: 235 YILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS--------------------- 273
             +++    F   S   +   I     +  E  W  ++S                     
Sbjct: 195 AEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVP 254
Query: 274 ----SAKQLISSLLTVDPNRRPSAQELLNHPW 301
                 + L+S +L  DPN+R SA+  L HP+
Sbjct: 255 PLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 286

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 103/241 (42%), Gaps = 55/241 (22%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGA---------AAVIRQI 151
           HPN++ L DV   +N ++L+ E              +++M+  A          + + Q+
Sbjct: 60  HPNIVKLLDVIHTENKLYLVFEFLHQD--------LKKFMDASALTGIPLPLIKSYLFQL 111
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEG-----YTDPVVGLFG 206
            +GLA  H   ++HRDLKP+N L      +  +K+ DFGL+   G     Y   VV L+ 
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLW- 167
Query: 207 SIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYE 265
              Y +PE LL  +  S + D+WSLG I   +++    F   S   +   I     +  E
Sbjct: 168 ---YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 224
Query: 266 QTWKNISS-------------------------SAKQLISSLLTVDPNRRPSAQELLNHP 300
             W  ++S                           + L+S +L  DPN+R SA+  L HP
Sbjct: 225 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 284
Query: 301 W 301
           +
Sbjct: 285 F 285

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 103/241 (42%), Gaps = 55/241 (22%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGA---------AAVIRQI 151
           HPN++ L DV   +N ++L+ E              +++M+  A          + + Q+
Sbjct: 60  HPNIVKLLDVIHTENKLYLVFEFLHQD--------LKKFMDASALTGIPLPLIKSYLFQL 111
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEG-----YTDPVVGLFG 206
            +GLA  H   ++HRDLKP+N L      +  +K+ DFGL+   G     Y   VV L+ 
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLW- 167
Query: 207 SIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYE 265
              Y +PE LL  +  S + D+WSLG I   +++    F   S   +   I     +  E
Sbjct: 168 ---YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 224
Query: 266 QTWKNISS-------------------------SAKQLISSLLTVDPNRRPSAQELLNHP 300
             W  ++S                           + L+S +L  DPN+R SA+  L HP
Sbjct: 225 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 284
Query: 301 W 301
           +
Sbjct: 285 F 285

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 76/298 (25%), Positives = 127/298 (42%), Gaps = 56/298 (18%)
Query: 11  EYEVTDI-----LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXX 65
           E E TDI     LG G +  V  G+ K    T  VA+KTL+                   
Sbjct: 255 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--VAVKTLKE------------------ 294
Query: 66  XQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCS 125
                          D +   E L    +++ +  HPN++ L  V   +   ++I E  +
Sbjct: 295 ---------------DTMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMT 338
Query: 126 GGELFDRIVAQERYMEVGAAAVI---RQIAEGLAALHQANIVHRDLKPENCLFLNDREDS 182
            G L D +    R  EV A  ++    QI+  +  L + N +HR+L   NCL     E+ 
Sbjct: 339 YGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLV---GENH 394
Query: 183 PLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILL 238
            +K+ DFGLS +   + YT      F  I + +PE+L  ++ + KSD+W+ GV+L+ I  
Sbjct: 395 LVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 453
Query: 239 SGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
            G  P+      Q  +++   E  +  +  +       +L+ +    +P+ RPS  E+
Sbjct: 454 YGMSPYPGIDLSQVYELL---EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 508

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 75.9 bits (185), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 103/241 (42%), Gaps = 55/241 (22%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGA---------AAVIRQI 151
           HPN++ L DV   +N ++L+ E              +++M+  A          + + Q+
Sbjct: 64  HPNIVKLLDVIHTENKLYLVFEFLHQD--------LKKFMDASALTGIPLPLIKSYLFQL 115
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEG-----YTDPVVGLFG 206
            +GLA  H   ++HRDLKP+N L      +  +K+ DFGL+   G     Y   VV L+ 
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLW- 171
Query: 207 SIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYE 265
              Y +PE LL  +  S + D+WSLG I   +++    F   S   +   I     +  E
Sbjct: 172 ---YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 228
Query: 266 QTWKNISS-------------------------SAKQLISSLLTVDPNRRPSAQELLNHP 300
             W  ++S                           + L+S +L  DPN+R SA+  L HP
Sbjct: 229 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 288
Query: 301 W 301
           +
Sbjct: 289 F 289

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 75.9 bits (185), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 103/241 (42%), Gaps = 55/241 (22%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGA---------AAVIRQI 151
           HPN++ L DV   +N ++L+ E              +++M+  A          + + Q+
Sbjct: 63  HPNIVKLLDVIHTENKLYLVFEFLHQD--------LKKFMDASALTGIPLPLIKSYLFQL 114
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEG-----YTDPVVGLFG 206
            +GLA  H   ++HRDLKP+N L      +  +K+ DFGL+   G     Y   VV L+ 
Sbjct: 115 LQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLW- 170
Query: 207 SIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYE 265
              Y +PE LL  +  S + D+WSLG I   +++    F   S   +   I     +  E
Sbjct: 171 ---YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 227
Query: 266 QTWKNISS-------------------------SAKQLISSLLTVDPNRRPSAQELLNHP 300
             W  ++S                           + L+S +L  DPN+R SA+  L HP
Sbjct: 228 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 287
Query: 301 W 301
           +
Sbjct: 288 F 288

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 75.9 bits (185), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 103/241 (42%), Gaps = 55/241 (22%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGA---------AAVIRQI 151
           HPN++ L DV   +N ++L+ E              +++M+  A          + + Q+
Sbjct: 61  HPNIVKLLDVIHTENKLYLVFEFLHQD--------LKKFMDASALTGIPLPLIKSYLFQL 112
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEG-----YTDPVVGLFG 206
            +GLA  H   ++HRDLKP+N L      +  +K+ DFGL+   G     Y   VV L+ 
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLW- 168
Query: 207 SIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYE 265
              Y +PE LL  +  S + D+WSLG I   +++    F   S   +   I     +  E
Sbjct: 169 ---YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 225
Query: 266 QTWKNISS-------------------------SAKQLISSLLTVDPNRRPSAQELLNHP 300
             W  ++S                           + L+S +L  DPN+R SA+  L HP
Sbjct: 226 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 285
Query: 301 W 301
           +
Sbjct: 286 F 286

>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353

Iteration: 1
 Score = 75.9 bits (185), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 83/355 (23%), Positives = 146/355 (41%), Gaps = 84/355 (23%)
Query: 8   LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQ 67
           ++ ++++  +LG G + VV     K  GE   VAIK +       P+  P          
Sbjct: 9   ISSDFQLKSLLGEGAYGVVCSATHKPTGEI--VAIKKIE------PFDKP---------- 50
Query: 68  IGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDV-----YEDQNGVHLILE 122
                          L     L   KI+++   H N+I ++++     +E+ N V++I E
Sbjct: 51  ---------------LFALRTLREIKILKHFK-HENIITIFNIQRPDSFENFNEVYIIQE 94
Query: 123 LCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDS 182
           L        R+++ +   +      I Q    +  LH +N++HRDLKP N L +N   D 
Sbjct: 95  LMQTD--LHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSN-LLINSNCD- 150
Query: 183 PLKIMDFGLS-----SVEGYTDPVVGLFGSIDYV------SPEALLQDRITSKS-DMWSL 230
            LK+ DFGL+     S    ++P     G +++V      +PE +L     S++ D+WS 
Sbjct: 151 -LKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSC 209
Query: 231 GVILYILLSGYPPFIAQSNRQKQQMIM-------------------AGEF---------S 262
           G IL  L    P F  +  R +  +I                    A E+         +
Sbjct: 210 GCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAA 269
Query: 263 FYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAKEEEMDAEIV 317
             E+ +  ++     L+  +L  DP +R +A+E L HP++       +E + E +
Sbjct: 270 PLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDPNDEPEGEPI 324

>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358

Iteration: 1
 Score = 75.9 bits (185), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 116/258 (44%), Gaps = 54/258 (20%)
Query: 89  LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVG---AA 145
           LV+ K V     H N+I L +V+  Q  +    ++    EL D  + Q   ME+     +
Sbjct: 68  LVLMKCVN----HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS 123
Query: 146 AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF 205
            ++ Q+  G+  LH A I+HRDLKP N +    + D  LKI+DFGL+   G +  +    
Sbjct: 124 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYV 180
Query: 206 GSIDYVSPEALLQDRITSKSDMWSLGVIL------YILLSGYPPFIAQSNRQKQQM---- 255
            +  Y +PE +L        D+WS+G I+       IL  G   +I Q N+  +Q+    
Sbjct: 181 VTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGR-DYIDQWNKVIEQLGTPC 239
Query: 256 -------------------IMAGEFSFYEQTWKNI------------SSSAKQLISSLLT 284
                                AG +SF E+ + ++            +S A+ L+S +L 
Sbjct: 240 PEFMKKLQPTVRTYVENRPKYAG-YSF-EKLFPDVLFPADSEHNKLKASQARDLLSKMLV 297
Query: 285 VDPNRRPSAQELLNHPWV 302
           +D ++R S  E L HP++
Sbjct: 298 IDASKRISVDEALQHPYI 315

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 75.9 bits (185), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 103/241 (42%), Gaps = 55/241 (22%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGA---------AAVIRQI 151
           HPN++ L DV   +N ++L+ E              +++M+  A          + + Q+
Sbjct: 64  HPNIVKLLDVIHTENKLYLVFEFLHQD--------LKKFMDASALTGIPLPLIKSYLFQL 115
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEG-----YTDPVVGLFG 206
            +GLA  H   ++HRDLKP+N L      +  +K+ DFGL+   G     Y   VV L+ 
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLW- 171
Query: 207 SIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYE 265
              Y +PE LL  +  S + D+WSLG I   +++    F   S   +   I     +  E
Sbjct: 172 ---YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 228
Query: 266 QTWKNISS-------------------------SAKQLISSLLTVDPNRRPSAQELLNHP 300
             W  ++S                           + L+S +L  DPN+R SA+  L HP
Sbjct: 229 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 288
Query: 301 W 301
           +
Sbjct: 289 F 289

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 75.9 bits (185), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 120/273 (43%), Gaps = 33/273 (12%)
Query: 73  TRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDR 132
           T+ +  + D ++  EIL           HP ++ L   Y     + +++E C GG +   
Sbjct: 54  TKSEEELEDYIVEIEILA-------TCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAI 106
Query: 133 IVAQERYM-EVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGL 191
           ++  +R + E     V RQ+ E L  LH   I+HRDLK  N L   + +   +++ DFG+
Sbjct: 107 MLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGD---IRLADFGV 163
Query: 192 SSVEGYT-DPVVGLFGSIDYVSPEALLQDRITS-----KSDMWSLGVILYILLSGYPPFI 245
           S+    T        G+  +++PE ++ + +       K+D+WSLG+ L  +    PP  
Sbjct: 164 SAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPH- 222
Query: 246 AQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGD 305
            + N  +  + +A        T    S   +  +   L  +P  RPSA +LL HP+    
Sbjct: 223 HELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPF---- 278
Query: 306 SAKEEEMDAEIVSRLQSFNARRKLRAAAIASVL 338
                      VS + S  A R+L A A A V+
Sbjct: 279 -----------VSSITSNKALRELVAEAKAEVM 300

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 75.9 bits (185), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 103/241 (42%), Gaps = 55/241 (22%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGA---------AAVIRQI 151
           HPN++ L DV   +N ++L+ E              +++M+  A          + + Q+
Sbjct: 65  HPNIVKLLDVIHTENKLYLVFEFLHQD--------LKKFMDASALTGIPLPLIKSYLFQL 116
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEG-----YTDPVVGLFG 206
            +GLA  H   ++HRDLKP+N L      +  +K+ DFGL+   G     Y   VV L+ 
Sbjct: 117 LQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLW- 172
Query: 207 SIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYE 265
              Y +PE LL  +  S + D+WSLG I   +++    F   S   +   I     +  E
Sbjct: 173 ---YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 229
Query: 266 QTWKNISS-------------------------SAKQLISSLLTVDPNRRPSAQELLNHP 300
             W  ++S                           + L+S +L  DPN+R SA+  L HP
Sbjct: 230 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 289
Query: 301 W 301
           +
Sbjct: 290 F 290

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 75.9 bits (185), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 103/241 (42%), Gaps = 55/241 (22%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGA---------AAVIRQI 151
           HPN++ L DV   +N ++L+ E              +++M+  A          + + Q+
Sbjct: 63  HPNIVKLLDVIHTENKLYLVFEFLHQD--------LKKFMDASALTGIPLPLIKSYLFQL 114
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEG-----YTDPVVGLFG 206
            +GLA  H   ++HRDLKP+N L      +  +K+ DFGL+   G     Y   VV L+ 
Sbjct: 115 LQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLW- 170
Query: 207 SIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYE 265
              Y +PE LL  +  S + D+WSLG I   +++    F   S   +   I     +  E
Sbjct: 171 ---YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 227
Query: 266 QTWKNISS-------------------------SAKQLISSLLTVDPNRRPSAQELLNHP 300
             W  ++S                           + L+S +L  DPN+R SA+  L HP
Sbjct: 228 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 287
Query: 301 W 301
           +
Sbjct: 288 F 288

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 75.9 bits (185), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 103/241 (42%), Gaps = 55/241 (22%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGA---------AAVIRQI 151
           HPN++ L DV   +N ++L+ E              +++M+  A          + + Q+
Sbjct: 62  HPNIVKLLDVIHTENKLYLVFEFLHQD--------LKKFMDASALTGIPLPLIKSYLFQL 113
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEG-----YTDPVVGLFG 206
            +GLA  H   ++HRDLKP+N L      +  +K+ DFGL+   G     Y   VV L+ 
Sbjct: 114 LQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLW- 169
Query: 207 SIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYE 265
              Y +PE LL  +  S + D+WSLG I   +++    F   S   +   I     +  E
Sbjct: 170 ---YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 226
Query: 266 QTWKNISS-------------------------SAKQLISSLLTVDPNRRPSAQELLNHP 300
             W  ++S                           + L+S +L  DPN+R SA+  L HP
Sbjct: 227 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 286
Query: 301 W 301
           +
Sbjct: 287 F 287

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score = 75.9 bits (185), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 107/249 (42%), Gaps = 42/249 (16%)
Query: 86  NEILVMRKIVENVSPHPNVIDLYDV-----YEDQNGVHLILELCSGGELFDRIVAQERYM 140
            E+ V+R +      HPNV+ L+DV      + +  + L+ E        D     ++  
Sbjct: 60  REVAVLRHL--ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ----DLTTYLDKVP 113
Query: 141 EVGAAA-----VIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVE 195
           E G        ++ Q+  GL  LH   +VHRDLKP+N L  +  +   +K+ DFGL+ + 
Sbjct: 114 EPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQ---IKLADFGLARIY 170
Query: 196 GYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQM 255
            +   +  +  ++ Y +PE LLQ    +  D+WS+G I   +    P F   S+  +   
Sbjct: 171 SFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGK 230
Query: 256 I-----MAGEFSF------------------YEQTWKNISSSAKQLISSLLTVDPNRRPS 292
           I     + GE  +                   E+   +I    K L+   LT +P +R S
Sbjct: 231 ILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRIS 290
Query: 293 AQELLNHPW 301
           A   L+HP+
Sbjct: 291 AYSALSHPY 299

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 75.9 bits (185), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 103/241 (42%), Gaps = 55/241 (22%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGA---------AAVIRQI 151
           HPN++ L DV   +N ++L+ E              + +M+  A          + + Q+
Sbjct: 60  HPNIVKLLDVIHTENKLYLVFEHVHQD--------LKTFMDASALTGIPLPLIKSYLFQL 111
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS-----SVEGYTDPVVGLFG 206
            +GLA  H   ++HRDLKP+N L      +  +K+ DFGL+      V  YT  VV L+ 
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLW- 167
Query: 207 SIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYE 265
              Y +PE LL  +  S + D+WSLG I   +++    F   S   +   I     +  E
Sbjct: 168 ---YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 224
Query: 266 QTWKNISS-------------------------SAKQLISSLLTVDPNRRPSAQELLNHP 300
             W  ++S                           + L+S +L  DPN+R SA+  L HP
Sbjct: 225 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 284
Query: 301 W 301
           +
Sbjct: 285 F 285

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 75.9 bits (185), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 120/273 (43%), Gaps = 33/273 (12%)
Query: 73  TRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDR 132
           T+ +  + D ++  EIL           HP ++ L   Y     + +++E C GG +   
Sbjct: 46  TKSEEELEDYIVEIEILA-------TCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAI 98
Query: 133 IVAQERYM-EVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGL 191
           ++  +R + E     V RQ+ E L  LH   I+HRDLK  N L   + +   +++ DFG+
Sbjct: 99  MLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGD---IRLADFGV 155
Query: 192 SSVEGYT-DPVVGLFGSIDYVSPEALLQDRITS-----KSDMWSLGVILYILLSGYPPFI 245
           S+    T        G+  +++PE ++ + +       K+D+WSLG+ L  +    PP  
Sbjct: 156 SAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPH- 214
Query: 246 AQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGD 305
            + N  +  + +A        T    S   +  +   L  +P  RPSA +LL HP+    
Sbjct: 215 HELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPF---- 270
Query: 306 SAKEEEMDAEIVSRLQSFNARRKLRAAAIASVL 338
                      VS + S  A R+L A A A V+
Sbjct: 271 -----------VSSITSNKALRELVAEAKAEVM 292

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 75.9 bits (185), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 109/240 (45%), Gaps = 48/240 (20%)
Query: 18  LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFFPTRKQV 77
           LG+G F  V  G   T   T +VAIKTL+  G+ +P  F                     
Sbjct: 192 LGQGCFGEVWMG---TWNGTTRVAIKTLKP-GTMSPEAF--------------------- 226
Query: 78  SVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE 137
                    E  VM+K+      H  ++ LY V  ++  ++++ E  S G L D +  + 
Sbjct: 227 -------LQEAQVMKKLR-----HEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGET 273
Query: 138 -RYMEVGAAA-VIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV- 194
            +Y+ +     +  QIA G+A + + N VHRDL+  N L     E+   K+ DFGL+ + 
Sbjct: 274 GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADFGLARLI 330
Query: 195 --EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQ 251
               YT      F  I + +PEA L  R T KSD+WS G++L  L + G  P+    NR+
Sbjct: 331 EDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 389

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 75.5 bits (184), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 109/240 (45%), Gaps = 48/240 (20%)
Query: 18  LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFFPTRKQV 77
           LG+G F  V  G   T   T +VAIKTL+  G+ +P  F                     
Sbjct: 192 LGQGCFGEVWMG---TWNGTTRVAIKTLKP-GTMSPEAF--------------------- 226
Query: 78  SVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE 137
                    E  VM+K+      H  ++ LY V  ++  ++++ E  S G L D +  + 
Sbjct: 227 -------LQEAQVMKKLR-----HEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGET 273
Query: 138 -RYMEVGAAA-VIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV- 194
            +Y+ +     +  QIA G+A + + N VHRDL+  N L     E+   K+ DFGL+ + 
Sbjct: 274 GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADFGLARLI 330
Query: 195 --EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQ 251
               YT      F  I + +PEA L  R T KSD+WS G++L  L + G  P+    NR+
Sbjct: 331 EDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 389

>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360

Iteration: 1
 Score = 75.5 bits (184), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 99/190 (52%), Gaps = 15/190 (7%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      E+ N V+L+  L  G +L + IV  ++  +     +I QI  G
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A+I+HRDLKP N   L   ED  LKI+DF L+      D + G   +  Y +PE
Sbjct: 138 LKYIHSADIIHRDLKPSN---LAVNEDCELKILDFYLA--RHTDDEMTGYVATRWYRAPE 192
Query: 215 ALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
            +L     +++ D+WS+G I+  LL+G   F    +  + ++I+    +   +  K ISS
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 274 -SAKQLISSL 282
            SA+  I SL
Sbjct: 253 ESARNYIQSL 262

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 75.5 bits (184), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 121/285 (42%), Gaps = 51/285 (17%)
Query: 18  LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFFPTRKQV 77
           LG+G F  V  G   T   T +VAIKTL+  G+ +P  F                     
Sbjct: 193 LGQGCFGEVWMG---TWNGTTRVAIKTLKP-GNMSPEAF--------------------- 227
Query: 78  SVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ- 136
                    E  VM+K+      H  ++ LY V  ++  ++++ E  S G L D +  + 
Sbjct: 228 -------LQEAQVMKKLR-----HEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEM 274
Query: 137 ERYMEVGAAA-VIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV- 194
            +Y+ +     +  QIA G+A + + N VHRDL+  N L     E+   K+ DFGL  + 
Sbjct: 275 GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADFGLGRLI 331
Query: 195 --EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQ 251
               YT      F  I + +PEA L  R T KSD+WS G++L  L + G  P+    NR+
Sbjct: 332 EDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 390
Query: 252 KQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
               +  G   +          S   L+      DP  RP+ + L
Sbjct: 391 VLDQVERG---YRMPCPPECPESLHDLMCQCWRKDPEERPTFEYL 432

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 75.5 bits (184), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 121/285 (42%), Gaps = 51/285 (17%)
Query: 18  LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFFPTRKQV 77
           LG+G F  V  G   T   T +VAIKTL+  G+ +P  F                     
Sbjct: 26  LGQGCFGEVWMG---TWNGTTRVAIKTLKP-GTMSPEAF--------------------- 60
Query: 78  SVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ- 136
                    E  VM+K+      H  ++ LY V  ++  ++++ E  S G L D +  + 
Sbjct: 61  -------LQEAQVMKKLR-----HEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEM 107
Query: 137 ERYMEVGAAA-VIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV- 194
            +Y+ +     +  QIA G+A + + N VHRDL   N L     E+   K+ DFGL+ + 
Sbjct: 108 GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLAAANILV---GENLVCKVADFGLARLI 164
Query: 195 --EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQ 251
               YT      F  I + +PEA L  R T KSD+WS G++L  L + G  P+    NR+
Sbjct: 165 EDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 223
Query: 252 KQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
               +  G   +          S   L+      DP  RP+ + L
Sbjct: 224 VLDQVERG---YRMPCPPECPESLHDLMCQCWRKDPEERPTFEYL 265

>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464

Iteration: 1
 Score = 75.5 bits (184), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 112/256 (43%), Gaps = 50/256 (19%)
Query: 89  LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVG---AA 145
           LV+ K V     H N+I L +V+  Q  +    ++    EL D  + Q   ME+     +
Sbjct: 112 LVLMKCVN----HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS 167
Query: 146 AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF 205
            ++ Q+  G+  LH A I+HRDLKP N +    + D  LKI+DFGL+   G +  +    
Sbjct: 168 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYV 224
Query: 206 GSIDYVSPEALLQDRITSKSDMWSLGVIL------YILLSGYPPFIAQSNRQKQQM-IMA 258
            +  Y +PE +L        D+WS+G I+       IL  G   +I Q N+  +Q+    
Sbjct: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR-DYIDQWNKVIEQLGTPC 283
Query: 259 GEF-SFYEQTWKNI-------------------------------SSSAKQLISSLLTVD 286
            EF    + T +N                                +S A+ L+S +L +D
Sbjct: 284 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 343
Query: 287 PNRRPSAQELLNHPWV 302
           P +R S  + L HP++
Sbjct: 344 PAKRISVDDALQHPYI 359

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 75.5 bits (184), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 122/285 (42%), Gaps = 51/285 (17%)
Query: 18  LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFFPTRKQV 77
           LG+G F  V  G   T   T +VAIKTL+  G+ +P  F                     
Sbjct: 26  LGQGCFGEVWMG---TWNGTTRVAIKTLKP-GTMSPEAF--------------------- 60
Query: 78  SVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ- 136
                    E  VM+K+      H  ++ LY V  ++  ++++ E  S G L D +  + 
Sbjct: 61  -------LQEAQVMKKLR-----HEKLVQLYAVVSEEP-IYIVTEYMSKGCLLDFLKGEM 107
Query: 137 ERYMEVGAAA-VIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV- 194
            +Y+ +     +  QIA G+A + + N VHRDL+  N L     E+   K+ DFGL+ + 
Sbjct: 108 GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADFGLARLI 164
Query: 195 --EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQ 251
               YT      F  I + +PEA L  R T KSD+WS G++L  L + G  P+    NR+
Sbjct: 165 EDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 223
Query: 252 KQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
               +  G   +          S   L+      DP  RP+ + L
Sbjct: 224 VLDQVERG---YRMPCPPECPESLHDLMCQCWRKDPEERPTFEYL 265

>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 75.5 bits (184), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 64/190 (33%), Positives = 97/190 (51%), Gaps = 15/190 (7%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      E+ N V+L+  L   G   + IV  ++  +     +I QI  G
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A+I+HRDLKP N   L   ED  LKI+D GL+      D + G   +  Y +PE
Sbjct: 138 LKYIHSADIIHRDLKPSN---LAVNEDCELKILDAGLA--RHTDDEMTGYVATRWYRAPE 192
Query: 215 ALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
            +L     +++ D+WS+G I+  LL+G   F    +  + ++I+    +   +  K ISS
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 274 -SAKQLISSL 282
            SA+  I SL
Sbjct: 253 ESARNYIQSL 262

>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1 Catalytic Domain Apo Form Length = 390

Iteration: 1
 Score = 75.5 bits (184), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 114/235 (48%), Gaps = 31/235 (13%)
Query: 86  NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAA 145
           NEI  + K+ ++      +I LYD       +++++E C   +L   +  ++        
Sbjct: 103 NEIAYLNKLQQHSD---KIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERK 158
Query: 146 AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVV-- 202
           +  + + E +  +HQ  IVH DLKP N L +    D  LK++DFG+++ ++  T  VV  
Sbjct: 159 SYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKD 214
Query: 203 GLFGSIDYVSPEALLQDRITSKS------------DMWSLGVILYILLSGYPPF---IAQ 247
              G+++Y+ PEA+ +D  +S+             D+WSLG ILY +  G  PF   I Q
Sbjct: 215 SQVGTVNYMPPEAI-KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ 273
Query: 248 SNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
            ++    +    E  F +   K++    + ++   L  DP +R S  ELL HP+V
Sbjct: 274 ISKLHAIIDPNHEIEFPDIPEKDL----QDVLKCCLKRDPKQRISIPELLAHPYV 324

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 75.5 bits (184), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 101/205 (49%), Gaps = 15/205 (7%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE---RYMEVGAAAVIRQIAEGLAA 157
           HPN++ LY      N V L++E   GG L++ +   E    Y    A +   Q ++G+A 
Sbjct: 60  HPNIVKLYGAC--LNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAY 117
Query: 158 LHQAN---IVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDYVSP 213
           LH      ++HRDLKP N L +     + LKI DFG +  ++ +   +    GS  +++P
Sbjct: 118 LHSMQPKALIHRDLKPPNLLLVAG--GTVLKICDFGTACDIQTH---MTNNKGSAAWMAP 172
Query: 214 EALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
           E       + K D++S G+IL+ +++   PF  +      +++ A          KN+  
Sbjct: 173 EVFEGSNYSEKCDVFSWGIILWEVITRRKPF-DEIGGPAFRIMWAVHNGTRPPLIKNLPK 231
Query: 274 SAKQLISSLLTVDPNRRPSAQELLN 298
             + L++   + DP++RPS +E++ 
Sbjct: 232 PIESLMTRCWSKDPSQRPSMEEIVK 256

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 75.5 bits (184), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 79/285 (27%), Positives = 122/285 (42%), Gaps = 51/285 (17%)
Query: 18  LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFFPTRKQV 77
           LG+G F  V  G   T   T +VAIKTL+  G+ +P  F                     
Sbjct: 19  LGQGCFGEVWMG---TWNGTTRVAIKTLKP-GTMSPEAF--------------------- 53
Query: 78  SVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE 137
                    E  VM+K+      H  ++ LY V  ++  ++++ E  S G L D +  + 
Sbjct: 54  -------LQEAQVMKKLR-----HEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGET 100
Query: 138 -RYMEVGAAA-VIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV- 194
            +Y+ +     +  QIA G+A + + N VHRDL+  N L     E+   K+ DFGL+ + 
Sbjct: 101 GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADFGLARLI 157
Query: 195 --EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQ 251
               YT      F  I + +PEA L  R T KSD+WS G++L  L + G  P+    NR+
Sbjct: 158 EDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 216
Query: 252 KQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
               +  G   +          S   L+      +P  RP+ + L
Sbjct: 217 VLDQVERG---YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYL 258

>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364

Iteration: 1
 Score = 75.5 bits (184), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 112/256 (43%), Gaps = 50/256 (19%)
Query: 89  LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVG---AA 145
           LV+ K V     H N+I L +V+  Q  +    ++    EL D  + Q   ME+     +
Sbjct: 74  LVLMKCVN----HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMS 129
Query: 146 AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF 205
            ++ Q+  G+  LH A I+HRDLKP N +    + D  LKI+DFGL+   G +  +    
Sbjct: 130 YLLYQMLXGIKHLHSAGIIHRDLKPSNIVV---KSDXTLKILDFGLARTAGTSFMMTPYV 186
Query: 206 GSIDYVSPEALLQDRITSKSDMWSLGVIL------YILLSGYPPFIAQSNRQKQQM-IMA 258
            +  Y +PE +L        D+WS+G I+       IL  G   +I Q N+  +Q+    
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR-DYIDQWNKVIEQLGTPC 245
Query: 259 GEF-SFYEQTWKNI-------------------------------SSSAKQLISSLLTVD 286
            EF    + T +N                                +S A+ L+S +L +D
Sbjct: 246 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 287 PNRRPSAQELLNHPWV 302
           P +R S  + L HP++
Sbjct: 306 PAKRISVDDALQHPYI 321

>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With Atp Length = 342

Iteration: 1
 Score = 75.5 bits (184), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 114/235 (48%), Gaps = 31/235 (13%)
Query: 86  NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAA 145
           NEI  + K+ ++      +I LYD       +++++E C   +L   +  ++        
Sbjct: 103 NEIAYLNKLQQHSD---KIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERK 158
Query: 146 AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVV-- 202
           +  + + E +  +HQ  IVH DLKP N L +    D  LK++DFG+++ ++  T  VV  
Sbjct: 159 SYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKD 214
Query: 203 GLFGSIDYVSPEALLQDRITSKS------------DMWSLGVILYILLSGYPPF---IAQ 247
              G+++Y+ PEA+ +D  +S+             D+WSLG ILY +  G  PF   I Q
Sbjct: 215 SQVGTVNYMPPEAI-KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ 273
Query: 248 SNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
            ++    +    E  F +   K++    + ++   L  DP +R S  ELL HP+V
Sbjct: 274 ISKLHAIIDPNHEIEFPDIPEKDL----QDVLKCCLKRDPKQRISIPELLAHPYV 324

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 75.5 bits (184), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 101/205 (49%), Gaps = 15/205 (7%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE---RYMEVGAAAVIRQIAEGLAA 157
           HPN++ LY      N V L++E   GG L++ +   E    Y    A +   Q ++G+A 
Sbjct: 61  HPNIVKLYGAC--LNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAY 118
Query: 158 LHQAN---IVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDYVSP 213
           LH      ++HRDLKP N L +     + LKI DFG +  ++ +   +    GS  +++P
Sbjct: 119 LHSMQPKALIHRDLKPPNLLLVAG--GTVLKICDFGTACDIQTH---MTNNKGSAAWMAP 173
Query: 214 EALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
           E       + K D++S G+IL+ +++   PF  +      +++ A          KN+  
Sbjct: 174 EVFEGSNYSEKCDVFSWGIILWEVITRRKPF-DEIGGPAFRIMWAVHNGTRPPLIKNLPK 232
Query: 274 SAKQLISSLLTVDPNRRPSAQELLN 298
             + L++   + DP++RPS +E++ 
Sbjct: 233 PIESLMTRCWSKDPSQRPSMEEIVK 257

>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 75.5 bits (184), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 64/190 (33%), Positives = 97/190 (51%), Gaps = 15/190 (7%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      E+ N V+L+  L   G   + IV  ++  +     +I QI  G
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A+I+HRDLKP N   L   ED  LKI+D GL+      D + G   +  Y +PE
Sbjct: 138 LKYIHSADIIHRDLKPSN---LAVNEDCELKILDRGLA--RHTDDEMTGYVATRWYRAPE 192
Query: 215 ALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
            +L     +++ D+WS+G I+  LL+G   F    +  + ++I+    +   +  K ISS
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 274 -SAKQLISSL 282
            SA+  I SL
Sbjct: 253 ESARNYIQSL 262

>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356

Iteration: 1
 Score = 75.5 bits (184), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 112/256 (43%), Gaps = 50/256 (19%)
Query: 89  LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVG---AA 145
           LV+ K V     H N+I L +V+  Q  +    ++    EL D  + Q   ME+     +
Sbjct: 67  LVLMKCVN----HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMS 122
Query: 146 AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF 205
            ++ Q+  G+  LH A I+HRDLKP N +    + D  LKI+DFGL+   G +  +    
Sbjct: 123 YLLYQMLXGIKHLHSAGIIHRDLKPSNIVV---KSDXTLKILDFGLARTAGTSFMMTPYV 179
Query: 206 GSIDYVSPEALLQDRITSKSDMWSLGVIL------YILLSGYPPFIAQSNRQKQQM-IMA 258
            +  Y +PE +L        D+WS+G I+       IL  G   +I Q N+  +Q+    
Sbjct: 180 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR-DYIDQWNKVIEQLGTPC 238
Query: 259 GEF-SFYEQTWKNI-------------------------------SSSAKQLISSLLTVD 286
            EF    + T +N                                +S A+ L+S +L +D
Sbjct: 239 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 298
Query: 287 PNRRPSAQELLNHPWV 302
           P +R S  + L HP++
Sbjct: 299 PAKRISVDDALQHPYI 314

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 75.5 bits (184), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 109/240 (45%), Gaps = 48/240 (20%)
Query: 18  LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFFPTRKQV 77
           LG+G F  V  G   T   T +VAIKTL+  G+ +P  F                     
Sbjct: 275 LGQGCFGEVWMG---TWNGTTRVAIKTLK-PGTMSPEAF--------------------- 309
Query: 78  SVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE 137
                    E  VM+K+      H  ++ LY V  ++  ++++ E  S G L D +  + 
Sbjct: 310 -------LQEAQVMKKLR-----HEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGET 356
Query: 138 -RYMEVGAAA-VIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV- 194
            +Y+ +     +  QIA G+A + + N VHRDL+  N L     E+   K+ DFGL+ + 
Sbjct: 357 GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADFGLARLI 413
Query: 195 --EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQ 251
               YT      F  I + +PEA L  R T KSD+WS G++L  L + G  P+    NR+
Sbjct: 414 EDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 472

>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364

Iteration: 1
 Score = 75.1 bits (183), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 112/256 (43%), Gaps = 50/256 (19%)
Query: 89  LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVG---AA 145
           LV+ K V     H N+I L +V+  Q  +    ++    EL D  + Q   ME+     +
Sbjct: 74  LVLMKXVN----HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMS 129
Query: 146 AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF 205
            ++ Q+  G+  LH A I+HRDLKP N +    + D  LKI+DFGL+   G +  +    
Sbjct: 130 YLLYQMLXGIKHLHSAGIIHRDLKPSNIVV---KSDXTLKILDFGLARTAGTSFMMTPYV 186
Query: 206 GSIDYVSPEALLQDRITSKSDMWSLGVIL------YILLSGYPPFIAQSNRQKQQM-IMA 258
            +  Y +PE +L        D+WS+G I+       IL  G   +I Q N+  +Q+    
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR-DYIDQWNKVIEQLGTPC 245
Query: 259 GEF-SFYEQTWKNI-------------------------------SSSAKQLISSLLTVD 286
            EF    + T +N                                +S A+ L+S +L +D
Sbjct: 246 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 287 PNRRPSAQELLNHPWV 302
           P +R S  + L HP++
Sbjct: 306 PAKRISVDDALQHPYI 321

>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a Mutant In Complex With Sp600125 Inhibitor Length = 390

Iteration: 1
 Score = 75.1 bits (183), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 114/235 (48%), Gaps = 31/235 (13%)
Query: 86  NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAA 145
           NEI  + K+ ++      +I LYD       +++++E C   +L   +  ++        
Sbjct: 103 NEIAYLNKLQQHSD---KIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERK 158
Query: 146 AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVV-- 202
           +  + + E +  +HQ  IVH DLKP N L +    D  LK++DFG+++ ++  T  VV  
Sbjct: 159 SYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKD 214
Query: 203 GLFGSIDYVSPEALLQDRITSKS------------DMWSLGVILYILLSGYPPF---IAQ 247
              G+++Y+ PEA+ +D  +S+             D+WSLG ILY +  G  PF   I Q
Sbjct: 215 SQVGAVNYMPPEAI-KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ 273
Query: 248 SNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
            ++    +    E  F +   K++    + ++   L  DP +R S  ELL HP+V
Sbjct: 274 ISKLHAIIDPNHEIEFPDIPEKDL----QDVLKCCLKRDPKQRISIPELLAHPYV 324

>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 75.1 bits (183), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 64/190 (33%), Positives = 97/190 (51%), Gaps = 15/190 (7%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      E+ N V+L+  L   G   + IV  ++  +     +I QI  G
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A+I+HRDLKP N   L   ED  LKI+D GL+      D + G   +  Y +PE
Sbjct: 138 LKYIHSADIIHRDLKPSN---LAVNEDCELKILDGGLA--RHTDDEMTGYVATRWYRAPE 192
Query: 215 ALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
            +L     +++ D+WS+G I+  LL+G   F    +  + ++I+    +   +  K ISS
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 274 -SAKQLISSL 282
            SA+  I SL
Sbjct: 253 ESARNYIQSL 262

>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379

Iteration: 1
 Score = 75.1 bits (183), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 116/257 (45%), Gaps = 52/257 (20%)
Query: 89  LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVG---AA 145
           LV+ K V     H N+I L +V+  Q  +    ++    EL D  + Q   ME+     +
Sbjct: 74  LVLMKCVN----HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS 129
Query: 146 AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF 205
            ++ Q+  G+  LH A I+HRDLKP N +    + D  LKI+DFGL+   G +  +    
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPEV 186
Query: 206 GSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF-----IAQSNRQKQQM----- 255
            +  Y +PE +L        D+WS+G I+  ++ G   F     I Q N+  +Q+     
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCP 246
Query: 256 ------------------IMAGEFSFYEQTWKNI------------SSSAKQLISSLLTV 285
                               AG +SF E+ + ++            +S A+ L+S +L +
Sbjct: 247 EFMKKLQPTVRTYVENRPKYAG-YSF-EKLFPDVLFPADSEHNALKASQARDLLSKMLVI 304
Query: 286 DPNRRPSAQELLNHPWV 302
           D ++R S  E L HP++
Sbjct: 305 DASKRISVDEALQHPYI 321

>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364

Iteration: 1
 Score = 75.1 bits (183), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 112/256 (43%), Gaps = 50/256 (19%)
Query: 89  LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVG---AA 145
           LV+ K V     H N+I L +V+  Q  +    ++    EL D  + Q   ME+     +
Sbjct: 74  LVLMKCVN----HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS 129
Query: 146 AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF 205
            ++ Q+  G+  LH A I+HRDLKP N +    + D  LKI+DFGL+   G +  +    
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYV 186
Query: 206 GSIDYVSPEALLQDRITSKSDMWSLGVIL------YILLSGYPPFIAQSNRQKQQM-IMA 258
            +  Y +PE +L        D+WS+G I+       IL  G   +I Q N+  +Q+    
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR-DYIDQWNKVIEQLGTPC 245
Query: 259 GEF-SFYEQTWKNI-------------------------------SSSAKQLISSLLTVD 286
            EF    + T +N                                +S A+ L+S +L +D
Sbjct: 246 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 287 PNRRPSAQELLNHPWV 302
           P +R S  + L HP++
Sbjct: 306 PAKRISVDDALQHPYI 321

>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356

Iteration: 1
 Score = 75.1 bits (183), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 112/256 (43%), Gaps = 50/256 (19%)
Query: 89  LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVG---AA 145
           LV+ K V     H N+I L +V+  Q  +    ++    EL D  + Q   ME+     +
Sbjct: 68  LVLMKCVN----HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS 123
Query: 146 AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF 205
            ++ Q+  G+  LH A I+HRDLKP N +    + D  LKI+DFGL+   G +  +    
Sbjct: 124 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYV 180
Query: 206 GSIDYVSPEALLQDRITSKSDMWSLGVIL------YILLSGYPPFIAQSNRQKQQM-IMA 258
            +  Y +PE +L        D+WS+G I+       IL  G   +I Q N+  +Q+    
Sbjct: 181 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR-DYIDQWNKVIEQLGTPC 239
Query: 259 GEF-SFYEQTWKNI-------------------------------SSSAKQLISSLLTVD 286
            EF    + T +N                                +S A+ L+S +L +D
Sbjct: 240 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 299
Query: 287 PNRRPSAQELLNHPWV 302
           P +R S  + L HP++
Sbjct: 300 PAKRISVDDALQHPYI 315

>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364

Iteration: 1
 Score = 75.1 bits (183), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 112/256 (43%), Gaps = 50/256 (19%)
Query: 89  LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVG---AA 145
           LV+ K V     H N+I L +V+  Q  +    ++    EL D  + Q   ME+     +
Sbjct: 75  LVLMKCVN----HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS 130
Query: 146 AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF 205
            ++ Q+  G+  LH A I+HRDLKP N +    + D  LKI+DFGL+   G +  +    
Sbjct: 131 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYV 187
Query: 206 GSIDYVSPEALLQDRITSKSDMWSLGVIL------YILLSGYPPFIAQSNRQKQQM-IMA 258
            +  Y +PE +L        D+WS+G I+       IL  G   +I Q N+  +Q+    
Sbjct: 188 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR-DYIDQWNKVIEQLGTPC 246
Query: 259 GEF-SFYEQTWKNI-------------------------------SSSAKQLISSLLTVD 286
            EF    + T +N                                +S A+ L+S +L +D
Sbjct: 247 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 306
Query: 287 PNRRPSAQELLNHPWV 302
           P +R S  + L HP++
Sbjct: 307 PAKRISVDDALQHPYI 322

>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365

Iteration: 1
 Score = 75.1 bits (183), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 112/256 (43%), Gaps = 50/256 (19%)
Query: 89  LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVG---AA 145
           LV+ K V     H N+I L +V+  Q  +    ++    EL D  + Q   ME+     +
Sbjct: 75  LVLMKCVN----HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS 130
Query: 146 AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF 205
            ++ Q+  G+  LH A I+HRDLKP N +    + D  LKI+DFGL+   G +  +    
Sbjct: 131 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYV 187
Query: 206 GSIDYVSPEALLQDRITSKSDMWSLGVIL------YILLSGYPPFIAQSNRQKQQM-IMA 258
            +  Y +PE +L        D+WS+G I+       IL  G   +I Q N+  +Q+    
Sbjct: 188 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR-DYIDQWNKVIEQLGTPC 246
Query: 259 GEF-SFYEQTWKNI-------------------------------SSSAKQLISSLLTVD 286
            EF    + T +N                                +S A+ L+S +L +D
Sbjct: 247 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 306
Query: 287 PNRRPSAQELLNHPWV 302
           P +R S  + L HP++
Sbjct: 307 PAKRISVDDALQHPYI 322

>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363

Iteration: 1
 Score = 75.1 bits (183), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 112/256 (43%), Gaps = 50/256 (19%)
Query: 89  LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVG---AA 145
           LV+ K V     H N+I L +V+  Q  +    ++    EL D  + Q   ME+     +
Sbjct: 74  LVLMKCVN----HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS 129
Query: 146 AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF 205
            ++ Q+  G+  LH A I+HRDLKP N +    + D  LKI+DFGL+   G +  +    
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYV 186
Query: 206 GSIDYVSPEALLQDRITSKSDMWSLGVIL------YILLSGYPPFIAQSNRQKQQM-IMA 258
            +  Y +PE +L        D+WS+G I+       IL  G   +I Q N+  +Q+    
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR-DYIDQWNKVIEQLGTPC 245
Query: 259 GEF-SFYEQTWKNI-------------------------------SSSAKQLISSLLTVD 286
            EF    + T +N                                +S A+ L+S +L +D
Sbjct: 246 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 287 PNRRPSAQELLNHPWV 302
           P +R S  + L HP++
Sbjct: 306 PAKRISVDDALQHPYI 321

>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356

Iteration: 1
 Score = 75.1 bits (183), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 112/256 (43%), Gaps = 50/256 (19%)
Query: 89  LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVG---AA 145
           LV+ K V     H N+I L +V+  Q  +    ++    EL D  + Q   ME+     +
Sbjct: 68  LVLMKCVN----HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS 123
Query: 146 AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF 205
            ++ Q+  G+  LH A I+HRDLKP N +    + D  LKI+DFGL+   G +  +    
Sbjct: 124 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYV 180
Query: 206 GSIDYVSPEALLQDRITSKSDMWSLGVIL------YILLSGYPPFIAQSNRQKQQM-IMA 258
            +  Y +PE +L        D+WS+G I+       IL  G   +I Q N+  +Q+    
Sbjct: 181 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR-DYIDQWNKVIEQLGTPC 239
Query: 259 GEF-SFYEQTWKNI-------------------------------SSSAKQLISSLLTVD 286
            EF    + T +N                                +S A+ L+S +L +D
Sbjct: 240 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 299
Query: 287 PNRRPSAQELLNHPWV 302
           P +R S  + L HP++
Sbjct: 300 PAKRISVDDALQHPYI 315

>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362

Iteration: 1
 Score = 75.1 bits (183), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 112/256 (43%), Gaps = 50/256 (19%)
Query: 89  LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVG---AA 145
           LV+ K V     H N+I L +V+  Q  +    ++    EL D  + Q   ME+     +
Sbjct: 73  LVLMKCVN----HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS 128
Query: 146 AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF 205
            ++ Q+  G+  LH A I+HRDLKP N +    + D  LKI+DFGL+   G +  +    
Sbjct: 129 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYV 185
Query: 206 GSIDYVSPEALLQDRITSKSDMWSLGVIL------YILLSGYPPFIAQSNRQKQQM-IMA 258
            +  Y +PE +L        D+WS+G I+       IL  G   +I Q N+  +Q+    
Sbjct: 186 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR-DYIDQWNKVIEQLGTPC 244
Query: 259 GEF-SFYEQTWKNI-------------------------------SSSAKQLISSLLTVD 286
            EF    + T +N                                +S A+ L+S +L +D
Sbjct: 245 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 304
Query: 287 PNRRPSAQELLNHPWV 302
           P +R S  + L HP++
Sbjct: 305 PAKRISVDDALQHPYI 320

>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 112/256 (43%), Gaps = 50/256 (19%)
Query: 89  LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVG---AA 145
           LV+ K V     H N+I L +V+  Q  +    ++    EL D  + Q   ME+     +
Sbjct: 112 LVLMKCVN----HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS 167
Query: 146 AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF 205
            ++ Q+  G+  LH A I+HRDLKP N +    + D  LKI+DFGL+   G +  +    
Sbjct: 168 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYV 224
Query: 206 GSIDYVSPEALLQDRITSKSDMWSLGVIL------YILLSGYPPFIAQSNRQKQQM-IMA 258
            +  Y +PE +L        D+WS+G I+       IL  G   +I Q N+  +Q+    
Sbjct: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR-DYIDQWNKVIEQLGTPC 283
Query: 259 GEF-SFYEQTWKNI-------------------------------SSSAKQLISSLLTVD 286
            EF    + T +N                                +S A+ L+S +L +D
Sbjct: 284 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 343
Query: 287 PNRRPSAQELLNHPWV 302
           P +R S  + L HP++
Sbjct: 344 PAKRISVDDALQHPYI 359

>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 112/256 (43%), Gaps = 50/256 (19%)
Query: 89  LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVG---AA 145
           LV+ K V     H N+I L +V+  Q  +    ++    EL D  + Q   ME+     +
Sbjct: 74  LVLMKXVN----HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS 129
Query: 146 AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF 205
            ++ Q+  G+  LH A I+HRDLKP N +    + D  LKI+DFGL+   G +  +    
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDXTLKILDFGLARTAGTSFMMTPYV 186
Query: 206 GSIDYVSPEALLQDRITSKSDMWSLGVIL------YILLSGYPPFIAQSNRQKQQM-IMA 258
            +  Y +PE +L        D+WS+G I+       IL  G   +I Q N+  +Q+    
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR-DYIDQWNKVIEQLGTPC 245
Query: 259 GEF-SFYEQTWKNI-------------------------------SSSAKQLISSLLTVD 286
            EF    + T +N                                +S A+ L+S +L +D
Sbjct: 246 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 287 PNRRPSAQELLNHPWV 302
           P +R S  + L HP++
Sbjct: 306 PAKRISVDDALQHPYI 321

>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 112/256 (43%), Gaps = 50/256 (19%)
Query: 89  LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVG---AA 145
           LV+ K V     H N+I L +V+  Q  +    ++    EL D  + Q   ME+     +
Sbjct: 67  LVLMKCVN----HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS 122
Query: 146 AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF 205
            ++ Q+  G+  LH A I+HRDLKP N +    + D  LKI+DFGL+   G +  +    
Sbjct: 123 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYV 179
Query: 206 GSIDYVSPEALLQDRITSKSDMWSLGVIL------YILLSGYPPFIAQSNRQKQQM-IMA 258
            +  Y +PE +L        D+WS+G I+       IL  G   +I Q N+  +Q+    
Sbjct: 180 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR-DYIDQWNKVIEQLGTPC 238
Query: 259 GEF-SFYEQTWKNI-------------------------------SSSAKQLISSLLTVD 286
            EF    + T +N                                +S A+ L+S +L +D
Sbjct: 239 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 298
Query: 287 PNRRPSAQELLNHPWV 302
           P +R S  + L HP++
Sbjct: 299 PAKRISVDDALQHPYI 314

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 103/241 (42%), Gaps = 55/241 (22%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGA---------AAVIRQI 151
           HPN++ L DV   +N ++L+ E              +++M+  A          + + Q+
Sbjct: 64  HPNIVKLLDVIHTENKLYLVFEHVDQD--------LKKFMDASALTGIPLPLIKSYLFQL 115
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEG-----YTDPVVGLFG 206
            +GLA  H   ++HRDLKP+N L      +  +K+ DFGL+   G     Y   VV L+ 
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLW- 171
Query: 207 SIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYE 265
              Y +PE LL  +  S + D+WSLG I   +++    F   S   +   I     +  E
Sbjct: 172 ---YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 228
Query: 266 QTWKNISS-------------------------SAKQLISSLLTVDPNRRPSAQELLNHP 300
             W  ++S                           + L+S +L  DPN+R SA+  L HP
Sbjct: 229 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 288
Query: 301 W 301
           +
Sbjct: 289 F 289

>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 98/201 (48%), Gaps = 26/201 (12%)
Query: 121 LELCSGGELFDRIVAQERYMEVGAAA-VIRQIAEGLAALHQANIVHRDLKPENCLFLNDR 179
           +E C    L+D I ++    +      + RQI E L+ +H   I+HRDLKP N +F++  
Sbjct: 94  MEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMN-IFID-- 150
Query: 180 EDSPLKIMDFGLS---------------SVEGYTDPVVGLFGSIDYVSPEAL-LQDRITS 223
           E   +KI DFGL+               ++ G +D +    G+  YV+ E L        
Sbjct: 151 ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNE 210
Query: 224 KSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEF--SFYEQTWKNISSSAKQLISS 281
           K DM+SLG+I + ++  +   + + N  K+   ++ EF   F +   K      K++I  
Sbjct: 211 KIDMYSLGIIFFEMIYPFSTGMERVNILKKLRSVSIEFPPDFDDNKMK----VEKKIIRL 266
Query: 282 LLTVDPNRRPSAQELLNHPWV 302
           L+  DPN+RP A+ LLN  W+
Sbjct: 267 LIDHDPNKRPGARTLLNSGWL 287

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 109/240 (45%), Gaps = 48/240 (20%)
Query: 18  LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFFPTRKQV 77
           LG+G F  V  G   T   T +VAIKTL+  G+ +P  F                     
Sbjct: 192 LGQGCFGEVWMG---TWNGTTRVAIKTLKP-GTMSPEAF--------------------- 226
Query: 78  SVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE 137
                    E  VM+K+      H  ++ LY V  ++  ++++ E  S G L D +  + 
Sbjct: 227 -------LQEAQVMKKLR-----HEKLVQLYAVVSEEP-IYIVGEYMSKGSLLDFLKGET 273
Query: 138 -RYMEVGAAA-VIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV- 194
            +Y+ +     +  QIA G+A + + N VHRDL+  N L     E+   K+ DFGL+ + 
Sbjct: 274 GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADFGLARLI 330
Query: 195 --EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQ 251
               YT      F  I + +PEA L  R T KSD+WS G++L  L + G  P+    NR+
Sbjct: 331 EDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 389

>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 112/256 (43%), Gaps = 50/256 (19%)
Query: 89  LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVG---AA 145
           LV+ K V     H N+I L +V+  Q  +    ++    EL D  + Q   ME+     +
Sbjct: 74  LVLMKXVN----HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMS 129
Query: 146 AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF 205
            ++ Q+  G+  LH A I+HRDLKP N +    + D  LKI+DFGL+   G +  +    
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDXTLKILDFGLARTAGTSFMMTPYV 186
Query: 206 GSIDYVSPEALLQDRITSKSDMWSLGVIL------YILLSGYPPFIAQSNRQKQQM-IMA 258
            +  Y +PE +L        D+WS+G I+       IL  G   +I Q N+  +Q+    
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR-DYIDQWNKVIEQLGTPC 245
Query: 259 GEF-SFYEQTWKNI-------------------------------SSSAKQLISSLLTVD 286
            EF    + T +N                                +S A+ L+S +L +D
Sbjct: 246 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 287 PNRRPSAQELLNHPWV 302
           P +R S  + L HP++
Sbjct: 306 PAKRISVDDALQHPYI 321

>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With Calcium Bound Length = 198

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 81/151 (53%), Gaps = 5/151 (3%)
Query: 358 DLNEEEIQNLRIHFRTICANGDNATLSEFEEVLKAMNMS-SLVPLAPRIFDLFDNNRDGT 416
           +L+  E       F T C +G   TL EF++     N+S S      ++F+ FD N+DG 
Sbjct: 10  ELSATECHQWYKKFMTECPSG-QLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNKDGY 68
Query: 417 VDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALP--DDCLPVDI 474
           +D  E +   S + K + D  LR  F++YD+D +GCI + E+ ++++A+   + C    +
Sbjct: 69  IDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEA-M 127
Query: 475 TEPGKLDEIFDLMDANNDGKVTFDEFRAAMQ 505
           T     + +FD +D N DG+++ +EF   +Q
Sbjct: 128 TAEEFTNMVFDKIDINGDGELSLEEFMEGVQ 158

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 102/241 (42%), Gaps = 55/241 (22%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGA---------AAVIRQI 151
           HPN++ L DV   +N ++L+ E              + +M+  A          + + Q+
Sbjct: 64  HPNIVKLLDVIHTENKLYLVFEFLHQD--------LKTFMDASALTGIPLPLIKSYLFQL 115
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEG-----YTDPVVGLFG 206
            +GLA  H   ++HRDLKP+N L      +  +K+ DFGL+   G     Y   VV L+ 
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLW- 171
Query: 207 SIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYE 265
              Y +PE LL  +  S + D+WSLG I   +++    F   S   +   I     +  E
Sbjct: 172 ---YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 228
Query: 266 QTWKNISS-------------------------SAKQLISSLLTVDPNRRPSAQELLNHP 300
             W  ++S                           + L+S +L  DPN+R SA+  L HP
Sbjct: 229 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 288
Query: 301 W 301
           +
Sbjct: 289 F 289

>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain Length = 343

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 114/235 (48%), Gaps = 31/235 (13%)
Query: 86  NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAA 145
           NEI  + K+ ++      +I LYD       +++++E C   +L   +  ++        
Sbjct: 56  NEIAYLNKLQQHSD---KIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERK 111
Query: 146 AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVV-- 202
           +  + + E +  +HQ  IVH DLKP N L +    D  LK++DFG+++ ++  T  VV  
Sbjct: 112 SYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKD 167
Query: 203 GLFGSIDYVSPEALLQDRITSKS------------DMWSLGVILYILLSGYPPF---IAQ 247
              G+++Y+ PEA+ +D  +S+             D+WSLG ILY +  G  PF   I Q
Sbjct: 168 SQVGTVNYMPPEAI-KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ 226
Query: 248 SNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
            ++    +    E  F +   K++    + ++   L  DP +R S  ELL HP+V
Sbjct: 227 ISKLHAIIDPNHEIEFPDIPEKDL----QDVLKCCLKRDPKQRISIPELLAHPYV 277

>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (ttk) Length = 313

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 114/235 (48%), Gaps = 31/235 (13%)
Query: 86  NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAA 145
           NEI  + K+ ++      +I LYD       +++++E C   +L   +  ++        
Sbjct: 75  NEIAYLNKLQQHSD---KIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERK 130
Query: 146 AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVV-- 202
           +  + + E +  +HQ  IVH DLKP N L +    D  LK++DFG+++ ++  T  VV  
Sbjct: 131 SYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKD 186
Query: 203 GLFGSIDYVSPEALLQDRITSKS------------DMWSLGVILYILLSGYPPF---IAQ 247
              G+++Y+ PEA+ +D  +S+             D+WSLG ILY +  G  PF   I Q
Sbjct: 187 SQVGTVNYMPPEAI-KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ 245
Query: 248 SNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
            ++    +    E  F +   K++    + ++   L  DP +R S  ELL HP+V
Sbjct: 246 ISKLHAIIDPNHEIEFPDIPEKDL----QDVLKCCLKRDPKQRISIPELLAHPYV 296

>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 107/229 (46%), Gaps = 17/229 (7%)
Query: 75  KQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIV 134
           K+ S+S+     E   M K+      HP ++  Y V   +  ++++ E  S G L + + 
Sbjct: 41  KEGSMSEDEFFQEAQTMMKL-----SHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLR 95
Query: 135 AQERYMEVGAA-AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS 193
           +  + +E      +   + EG+A L     +HRDL   NCL   DR D  +K+ DFG++ 
Sbjct: 96  SHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLV--DR-DLCVKVSDFGMTR 152
Query: 194 V---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSN 249
               + Y   V   F  + + +PE     + +SKSD+W+ G++++ + S G  P+   +N
Sbjct: 153 YVLDDQYVSSVGTKF-PVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTN 211
Query: 250 RQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN 298
            +    +  G   +        S +  Q++ S     P +RP+ Q+LL+
Sbjct: 212 SEVVLKVSQGHRLYRPHL---ASDTIYQIMYSCWHELPEKRPTFQQLLS 257

>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 104/243 (42%), Gaps = 59/243 (24%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELC----------SGGELFDRIVAQERYMEVGAAAVIRQ 150
           H N++ L+DV      + L+ E C            G+L   IV           + + Q
Sbjct: 60  HKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVK----------SFLFQ 109
Query: 151 IAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEG-----YTDPVVGLF 205
           + +GL   H  N++HRDLKP+N L   + E   LK+ DFGL+   G     Y+  VV L+
Sbjct: 110 LLKGLGFCHSRNVLHRDLKPQNLLINRNGE---LKLADFGLARAFGIPVRCYSAEVVTLW 166
Query: 206 GSIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQ-QMIMAGEFSF 263
               Y  P+ L   ++ S S DMWS G I   L +   P    ++   Q + I     + 
Sbjct: 167 ----YRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTP 222
Query: 264 YEQTWKNIS-------------------------SSAKQLISSLLTVDPNRRPSAQELLN 298
            E+ W +++                         ++ + L+ +LL  +P +R SA+E L 
Sbjct: 223 TEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282
Query: 299 HPW 301
           HP+
Sbjct: 283 HPY 285

>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2- Yl)amino]benzamide Length = 320

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 114/235 (48%), Gaps = 31/235 (13%)
Query: 86  NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAA 145
           NEI  + K+ ++      +I LYD       +++++E C   +L   +  ++        
Sbjct: 55  NEIAYLNKLQQHSD---KIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERK 110
Query: 146 AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVV-- 202
           +  + + E +  +HQ  IVH DLKP N L +    D  LK++DFG+++ ++  T  VV  
Sbjct: 111 SYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKD 166
Query: 203 GLFGSIDYVSPEALLQDRITSKS------------DMWSLGVILYILLSGYPPF---IAQ 247
              G+++Y+ PEA+ +D  +S+             D+WSLG ILY +  G  PF   I Q
Sbjct: 167 SQVGTVNYMPPEAI-KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ 225
Query: 248 SNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
            ++    +    E  F +   K++    + ++   L  DP +R S  ELL HP+V
Sbjct: 226 ISKLHAIIDPNHEIEFPDIPEKDL----QDVLKCCLKRDPKQRISIPELLAHPYV 276

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 78/187 (41%), Gaps = 26/187 (13%)
Query: 147 VIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFG 206
           ++RQ   GL  LH   IVHRDLKPEN L  +      +K+ DFGL+ +  Y   +  +  
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENILVTSG---GTVKLADFGLARIYSYQMALAPVVV 173
Query: 207 SIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQ 266
           ++ Y +PE LLQ    +  DMWS+G I   +    P F   S   +   I        E 
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPED 233
Query: 267 TW-----------------------KNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVI 303
            W                         +  S  QL+  +LT +P++R SA   L H ++ 
Sbjct: 234 DWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLH 293
Query: 304 GDSAKEE 310
            D    E
Sbjct: 294 KDEGNPE 300

>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 85/177 (48%), Gaps = 25/177 (14%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAA--------------- 145
           HPNV+ L  V      + +I   CS G+L + +V +  + +VG+                
Sbjct: 71  HPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDF 130
Query: 146 -AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGL 204
             ++ QIA G+  L   ++VH+DL   N L  +      +KI D GL   E Y      L
Sbjct: 131 VHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLN---VKISDLGLFR-EVYAADYYKL 186
Query: 205 FGS----IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMI 256
            G+    I +++PEA++  + +  SD+WS GV+L+ + S G  P+   SN+   +MI
Sbjct: 187 LGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMI 243

>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 116/258 (44%), Gaps = 54/258 (20%)
Query: 89  LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVG---AA 145
           LV+ K V     H N+I L +V+  Q  +    ++    EL D  + Q   ME+     +
Sbjct: 74  LVLMKCVN----HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS 129
Query: 146 AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF 205
            ++ Q+  G+  LH A I+HRDLKP N +    + D  LKI+DFGL+   G +  +    
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMEPEV 186
Query: 206 GSIDYVSPEALLQDRITSKSDMWSLGVIL------YILLSGYPPFIAQSNRQKQQM---- 255
            +  Y +PE +L        D+WS+G I+       IL  G   +I Q N+  +Q+    
Sbjct: 187 VTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGR-DYIDQWNKVIEQLGTPC 245
Query: 256 -------------------IMAGEFSFYEQTWKNI------------SSSAKQLISSLLT 284
                                AG +SF E+ + ++            +S A+ L+S +L 
Sbjct: 246 PEFMKKLQPTVRTYVENRPKYAG-YSF-EKLFPDVLFPADSEHNKLKASQARDLLSKMLV 303
Query: 285 VDPNRRPSAQELLNHPWV 302
           +D ++R S  E L HP++
Sbjct: 304 IDASKRISVDEALQHPYI 321

>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 78/289 (26%), Positives = 126/289 (43%), Gaps = 49/289 (16%)
Query: 13  EVTDILGRGGFSVVRRGIKKTCGETNQ-VAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFF 71
           ++ +++G G F  V RG  K  G+    VAIKTL+                      G+ 
Sbjct: 19  KIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKG---------------------GYT 57
Query: 72  PTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL-- 129
             +++  +S+A +  +             HPN+I L  V  +   V ++ E    G L  
Sbjct: 58  ERQRREFLSEASIMGQF-----------EHPNIIRLEGVVTNSMPVMILTEFMENGALDS 106
Query: 130 FDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDF 189
           F R+    ++  +    ++R IA G+  L + + VHRDL   N L      +   K+ DF
Sbjct: 107 FLRL-NDGQFTVIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILV---NSNLVCKVSDF 162
Query: 190 GLSSV--EGYTDPV----VGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYP 242
           GLS    E  +DP     +G    I + +PEA+   + TS SD WS G++++ ++S G  
Sbjct: 163 GLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGER 222
Query: 243 PFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRP 291
           P+   SN   Q +I A E  +      +  +S  QL+      D N RP
Sbjct: 223 PYWDMSN---QDVINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARP 268

>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 85/177 (48%), Gaps = 25/177 (14%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAA--------------- 145
           HPNV+ L  V      + +I   CS G+L + +V +  + +VG+                
Sbjct: 88  HPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDF 147
Query: 146 -AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGL 204
             ++ QIA G+  L   ++VH+DL   N L  +      +KI D GL   E Y      L
Sbjct: 148 VHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLN---VKISDLGLFR-EVYAADYYKL 203
Query: 205 FGS----IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMI 256
            G+    I +++PEA++  + +  SD+WS GV+L+ + S G  P+   SN+   +MI
Sbjct: 204 LGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMI 260

>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715 Length = 317

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 114/235 (48%), Gaps = 31/235 (13%)
Query: 86  NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAA 145
           NEI  + K+ ++      +I LYD       +++++E C   +L   +  ++        
Sbjct: 59  NEIAYLNKLQQHSD---KIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERK 114
Query: 146 AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVV-- 202
           +  + + E +  +HQ  IVH DLKP N L +    D  LK++DFG+++ ++  T  VV  
Sbjct: 115 SYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKD 170
Query: 203 GLFGSIDYVSPEALLQDRITSKS------------DMWSLGVILYILLSGYPPF---IAQ 247
              G+++Y+ PEA+ +D  +S+             D+WSLG ILY +  G  PF   I Q
Sbjct: 171 SQVGTVNYMPPEAI-KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ 229
Query: 248 SNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
            ++    +    E  F +   K++    + ++   L  DP +R S  ELL HP+V
Sbjct: 230 ISKLHAIIDPNHEIEFPDIPEKDL----QDVLKCCLKRDPKQRISIPELLAHPYV 280

>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 78/187 (41%), Gaps = 26/187 (13%)
Query: 147 VIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFG 206
           ++RQ   GL  LH   IVHRDLKPEN L  +      +K+ DFGL+ +  Y   +  +  
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENILVTSG---GTVKLADFGLARIYSYQMALFPVVV 173
Query: 207 SIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQ 266
           ++ Y +PE LLQ    +  DMWS+G I   +    P F   S   +   I        E 
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPED 233
Query: 267 TW-----------------------KNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVI 303
            W                         +  S  QL+  +LT +P++R SA   L H ++ 
Sbjct: 234 DWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLH 293
Query: 304 GDSAKEE 310
            D    E
Sbjct: 294 KDEGNPE 300

>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 83/359 (23%), Positives = 144/359 (40%), Gaps = 92/359 (25%)
Query: 8   LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQ 67
           ++ ++++  +LG G + VV     K  GE   VAIK +       P+  P          
Sbjct: 9   ISSDFQLKSLLGEGAYGVVCSATHKPTGEI--VAIKKIE------PFDKP---------- 50
Query: 68  IGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDV-----YEDQNGVHLILE 122
                          L     L   KI+++   H N+I ++++     +E+ N V++I E
Sbjct: 51  ---------------LFALRTLREIKILKHFK-HENIITIFNIQRPDSFENFNEVYIIQE 94
Query: 123 LCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDS 182
           L        R+++ +   +      I Q    +  LH +N++HRDLKP N L +N   D 
Sbjct: 95  LMQTD--LHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSN-LLINSNCD- 150
Query: 183 PLKIMDFGLSSV---------------EGYTDPVVGLFGSIDYVSPEALLQDRITSKS-D 226
            LK+ DFGL+ +                G T+ V   +    Y +PE +L     S++ D
Sbjct: 151 -LKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRW----YRAPEVMLTSAKYSRAMD 205
Query: 227 MWSLGVILYILLSGYPPFIAQSNRQKQQMIM-------------------AGEF------ 261
           +WS G IL  L    P F  +  R +  +I                    A E+      
Sbjct: 206 VWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPM 265
Query: 262 ---SFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAKEEEMDAEIV 317
              +  E+ +  ++     L+  +L  DP +R +A+E L HP++       +E + E +
Sbjct: 266 YPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDPNDEPEGEPI 324

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 78/187 (41%), Gaps = 26/187 (13%)
Query: 147 VIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFG 206
           ++RQ   GL  LH   IVHRDLKPEN L  +      +K+ DFGL+ +  Y   +  +  
Sbjct: 125 LMRQFLRGLDFLHANCIVHRDLKPENILVTSG---GTVKLADFGLARIYSYQMALTPVVV 181
Query: 207 SIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQ 266
           ++ Y +PE LLQ    +  DMWS+G I   +    P F   S   +   I        E 
Sbjct: 182 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPED 241
Query: 267 TW-----------------------KNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVI 303
            W                         +  S  QL+  +LT +P++R SA   L H ++ 
Sbjct: 242 DWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLH 301
Query: 304 GDSAKEE 310
            D    E
Sbjct: 302 KDEGNPE 308

>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/190 (30%), Positives = 80/190 (42%), Gaps = 32/190 (16%)
Query: 147 VIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYT---DPVVG 203
           ++RQ   GL  LH   IVHRDLKPEN L  +      +K+ DFGL+ +  Y    DPVV 
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENILVTSG---GTVKLADFGLARIYSYQMALDPVVV 173
Query: 204 LFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSF 263
              ++ Y +PE LLQ    +  DMWS+G I   +    P F   S   +   I       
Sbjct: 174 ---TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLP 230
Query: 264 YEQTW-----------------------KNISSSAKQLISSLLTVDPNRRPSAQELLNHP 300
            E  W                         +  S  QL+  +LT +P++R SA   L H 
Sbjct: 231 PEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHS 290
Query: 301 WVIGDSAKEE 310
           ++  D    E
Sbjct: 291 YLHKDEGNPE 300

>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 95/208 (45%), Gaps = 18/208 (8%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE--RYMEVGAAAVIRQIAEGLAAL 158
           HPNVI L  V      V +I E    G L D  + Q   ++  +    ++R IA G+  L
Sbjct: 67  HPNVIHLEGVVTKSTPVMIITEFMENGSL-DSFLRQNDGQFTVIQLVGMLRGIAAGMKYL 125
Query: 159 HQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS-------SVEGYTDPVVGLFGSIDYV 211
              N VHR L   N L      +   K+ DFGLS       S   YT  + G    I + 
Sbjct: 126 ADMNYVHRALAARNILV---NSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKI-PIRWT 181
Query: 212 SPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKN 270
           +PEA+   + TS SD+WS G++++ ++S G  P+   +N   Q +I A E  +      +
Sbjct: 182 APEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTN---QDVINAIEQDYRLPPPMD 238
Query: 271 ISSSAKQLISSLLTVDPNRRPSAQELLN 298
             S+  QL+      D N RP   +++N
Sbjct: 239 CPSALHQLMLDCWQKDRNHRPKFGQIVN 266

>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 116/258 (44%), Gaps = 54/258 (20%)
Query: 89  LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVG---AA 145
           LV+ K V     H N+I L +V+  Q  +    ++    EL D  + Q   ME+     +
Sbjct: 74  LVLMKCVN----HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS 129
Query: 146 AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF 205
            ++ Q+  G+  LH A I+HRDLKP N +    + D  LKI+DFGL+   G +  +    
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMEPEV 186
Query: 206 GSIDYVSPEALLQDRITSKSDMWSLGVIL------YILLSGYPPFIAQSNRQKQQM---- 255
            +  Y +PE +L        D+WS+G I+       IL  G   +I Q N+  +Q+    
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGR-DYIDQWNKVIEQLGTPC 245
Query: 256 -------------------IMAGEFSFYEQTWKNI------------SSSAKQLISSLLT 284
                                AG +SF E+ + ++            +S A+ L+S +L 
Sbjct: 246 PAFMKKLQPTVRNYVENRPKYAG-YSF-EKLFPDVLFPADSEHNKLKASQARDLLSKMLV 303
Query: 285 VDPNRRPSAQELLNHPWV 302
           +D ++R S  E L HP++
Sbjct: 304 IDASKRISVDEALQHPYI 321

>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 104/235 (44%), Gaps = 41/235 (17%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      +D    +L++     G    +++  E+  E     ++ Q+ +G
Sbjct: 83  HENVIGLLDVFTPDETLDDFTDFYLVMPFM--GTDLGKLMKHEKLGEDRIQFLVYQMLKG 140
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A I+HRDLKP N   L   ED  LKI+DFGL+        + G   +  Y +PE
Sbjct: 141 LRYIHAAGIIHRDLKPGN---LAVNEDCELKILDFGLARQA--DSEMXGXVVTRWYRAPE 195
Query: 215 ALLQD-RITSKSDMWSLGVILYILL---------------------SGYPP--FIAQSNR 250
            +L   R T   D+WS+G I+  ++                     +G PP  F+ +   
Sbjct: 196 VILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQS 255
Query: 251 QKQQMIMAG----EFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPW 301
            + +  M G    E   +     N S  A  L+  +L +D  +R +A E L HP+
Sbjct: 256 DEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPY 310

>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 130/296 (43%), Gaps = 49/296 (16%)
Query: 13  EVTDILGRGGFSVVRRGIKKTCGETNQ-VAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFF 71
           ++ +++G G F  V RG  K  G+    VAIKTL+                      G+ 
Sbjct: 17  KIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKG---------------------GYT 55
Query: 72  PTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL-- 129
             +++  +S+A +  +             HPN+I L  V  +   V ++ E    G L  
Sbjct: 56  ERQRREFLSEASIMGQF-----------EHPNIIRLEGVVTNSMPVMILTEFMENGALDS 104
Query: 130 FDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDF 189
           F R+    ++  +    ++R IA G+  L + + VHRDL   N L      +   K+ DF
Sbjct: 105 FLRL-NDGQFTVIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILV---NSNLVCKVSDF 160
Query: 190 GLSSV--EGYTDPV----VGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYP 242
           GLS    E  +DP     +G    I + +PEA+   + TS SD WS G++++ ++S G  
Sbjct: 161 GLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGER 220
Query: 243 PFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN 298
           P+   SN   Q +I A E  +      +  +S  QL+      D N RP   ++++
Sbjct: 221 PYWDMSN---QDVINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVS 273

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 78/285 (27%), Positives = 122/285 (42%), Gaps = 51/285 (17%)
Query: 18  LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFFPTRKQV 77
           LG+G F  V  G   T   T +VAIKTL+  G+ +P  F                     
Sbjct: 23  LGQGCFGEVWMG---TWNGTTRVAIKTLKP-GTMSPEAF--------------------- 57
Query: 78  SVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE 137
                    E  VM+K+      H  ++ LY V  ++  ++++ E  + G L D +  + 
Sbjct: 58  -------LQEAQVMKKLR-----HEKLVQLYAVVSEEP-IYIVTEYMNKGSLLDFLKGET 104
Query: 138 -RYMEVGAAA-VIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV- 194
            +Y+ +     +  QIA G+A + + N VHRDL+  N L     E+   K+ DFGL+ + 
Sbjct: 105 GKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADFGLARLI 161
Query: 195 --EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQ 251
               YT      F  I + +PEA L  R T KSD+WS G++L  L + G  P+    NR+
Sbjct: 162 EDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 220
Query: 252 KQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
               +  G   +          S   L+      +P  RP+ + L
Sbjct: 221 VLDQVERG---YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYL 262

>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 112/239 (46%), Gaps = 42/239 (17%)
Query: 101 HPNVIDLYDVY-----EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGL 155
           H NVI + D+      E    V+++ +L    +L+ +++  ++         + QI  GL
Sbjct: 100 HENVIGIRDILRASTLEAMRDVYIVQDLMET-DLY-KLLKSQQLSNDHICYFLYQILRGL 157
Query: 156 AALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV----EGYTDPVVGLFGSIDYV 211
             +H AN++HRDLKP N L +N   D  LKI DFGL+ +      +T  +     +  Y 
Sbjct: 158 KYIHSANVLHRDLKPSN-LLINTTCD--LKICDFGLARIADPEHDHTGFLTEXVATRWYR 214
Query: 212 SPEALLQDRITSKS-DMWSLGVILYILLSGYPPF---------------IAQSNRQKQQM 255
           +PE +L  +  +KS D+WS+G IL  +LS  P F               +   +++    
Sbjct: 215 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 274
Query: 256 IMAGEFSFYEQT--------WKNI----SSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
           I+  +   Y Q+        W  +     S A  L+  +LT +PN+R + +E L HP++
Sbjct: 275 IINMKARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEALAHPYL 333

>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 93/382 (24%), Positives = 146/382 (38%), Gaps = 131/382 (34%)
Query: 2   GQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXX 61
           G+  R +  +YE+   LG+G + +V + I +  GE   VA+K +      +         
Sbjct: 1   GRVDRHVLRKYELVKKLGKGAYGIVWKSIDRRTGEV--VAVKKIFDAFQNS--------- 49
Query: 62  XXXXXQIGFFPTRKQVSVSDALLT-NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLI 120
                             +DA  T  EI+++ ++    S H N+++L +V    N   + 
Sbjct: 50  ------------------TDAQRTFREIMILTEL----SGHENIVNLLNVLRADNDRDVY 87
Query: 121 LELCSGGELFDRIVAQERYMEVGAAAVIR--------------QIAEGLAALHQANIVHR 166
           L       +FD       YME    AVIR              Q+ + +  LH   ++HR
Sbjct: 88  L-------VFD-------YMETDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGGLLHR 133
Query: 167 DLKPENCLFLNDREDSPLKIMDFGLS-------------------SVEGYTD--PVVGLF 205
           D+KP N L      +  +K+ DFGLS                   + E + D  P++  +
Sbjct: 134 DMKPSNILL---NAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDY 190
Query: 206 GSID-YVSPEALL-QDRITSKSDMWSLGVILYILLSGYPPFIAQSN-RQKQQMIMAGEFS 262
            +   Y +PE LL   + T   DMWSLG IL  +L G P F   S   Q +++I   +F 
Sbjct: 191 VATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFP 250
Query: 263 FYEQT--------------------------------WKNI----------SSSAKQLIS 280
             E                                  WKN+          +  A  L+ 
Sbjct: 251 SNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLD 310
Query: 281 SLLTVDPNRRPSAQELLNHPWV 302
            LL  +PN+R SA + L HP+V
Sbjct: 311 KLLQFNPNKRISANDALKHPFV 332

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 77/284 (27%), Positives = 120/284 (42%), Gaps = 49/284 (17%)
Query: 18  LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFFPTRKQV 77
           LG+G F  V  G   T   T +VAIKTL+  G+ +P  F                     
Sbjct: 16  LGQGCFGEVWMG---TWNGTTRVAIKTLKP-GTMSPEAF--------------------- 50
Query: 78  SVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE 137
                    E  VM+K+      H  ++ LY V  ++  + ++ E  S G L D +  + 
Sbjct: 51  -------LQEAQVMKKLR-----HEKLVQLYAVVSEEP-IXIVTEYMSKGSLLDFLKGET 97
Query: 138 -RYMEVGAAA-VIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV- 194
            +Y+ +     +  QIA G+A + + N VHRDL+  N L     E+   K+ DFGL+ + 
Sbjct: 98  GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADFGLARLI 154
Query: 195 -EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQK 252
            +       G    I + +PEA L  R T KSD+WS G++L  L + G  P+    NR+ 
Sbjct: 155 EDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 214
Query: 253 QQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
              +  G   +          S   L+      +P  RP+ + L
Sbjct: 215 LDQVERG---YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYL 255

>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/246 (26%), Positives = 116/246 (47%), Gaps = 43/246 (17%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYME--------VGAAAVIRQIA 152
           H N++ L+D+   +  + L+ E        D+ + Q  Y++              + Q+ 
Sbjct: 59  HANIVTLHDIIHTEKSLTLVFEY------LDKDLKQ--YLDDCGNIINMHNVKLFLFQLL 110
Query: 153 EGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEG-----YTDPVVGLFGS 207
            GLA  H+  ++HRDLKP+N L +N+R +  LK+ DFGL+  +      Y + VV L+  
Sbjct: 111 RGLAYCHRQKVLHRDLKPQN-LLINERGE--LKLADFGLARAKSIPTKTYDNEVVTLW-- 165
Query: 208 IDYVSPEALLQDR-ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQ 266
             Y  P+ LL     +++ DMW +G I Y + +G P F   +  ++   I     +  E+
Sbjct: 166 --YRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEE 223
Query: 267 TWKNISSSAKQLISSLLTVDPNRRPSAQELLNH-PWVIGDSAKEEEMDAEIVSRLQSFNA 325
           TW  I S+ +    +     P  R  A+ LL+H P +  D        A+++++L  F  
Sbjct: 224 TWPGILSNEEFKTYNY----PKYR--AEALLSHAPRLDSDG-------ADLLTKLLQFEG 270
Query: 326 RRKLRA 331
           R ++ A
Sbjct: 271 RNRISA 276

>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292

Iteration: 1
 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 104/243 (42%), Gaps = 59/243 (24%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELC----------SGGELFDRIVAQERYMEVGAAAVIRQ 150
           H N++ L+DV      + L+ E C            G+L   IV           + + Q
Sbjct: 60  HKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVK----------SFLFQ 109
Query: 151 IAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEG-----YTDPVVGLF 205
           + +GL   H  N++HRDLKP+N L   + E   LK+ +FGL+   G     Y+  VV L+
Sbjct: 110 LLKGLGFCHSRNVLHRDLKPQNLLINRNGE---LKLANFGLARAFGIPVRCYSAEVVTLW 166
Query: 206 GSIDYVSPEALLQDRITSKS-DMWSLGVILYILL-SGYPPFIAQSNRQKQQMIMAGEFSF 263
               Y  P+ L   ++ S S DMWS G I   L  +G P F       + + I     + 
Sbjct: 167 ----YRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTP 222
Query: 264 YEQTWKNIS-------------------------SSAKQLISSLLTVDPNRRPSAQELLN 298
            E+ W +++                         ++ + L+ +LL  +P +R SA+E L 
Sbjct: 223 TEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282
Query: 299 HPW 301
           HP+
Sbjct: 283 HPY 285

>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688

Iteration: 1
 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 75/303 (24%), Positives = 126/303 (41%), Gaps = 50/303 (16%)
Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIG 69
           +++ V  I+GRGGF  V    K   G+    A+K L +                      
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKADTGKM--YAMKCLDK---------------------- 223
Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
               R ++   + L  NE +++  +  +    P ++ +   +   + +  IL+L +GG+L
Sbjct: 224 ---KRIKMKQGETLALNERIMLSLV--STGDCPFIVCMSYAFHTPDKLSFILDLMNGGDL 278
Query: 130 FDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDF 189
              +     + E        +I  GL  +H   +V+RDLKP N L     E   ++I D 
Sbjct: 279 HYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDL 335
Query: 190 GLSSVEGYTDPVVGLFGSIDYVSPEALLQD-RITSKSDMWSLGVILYILLSGYPPFIAQS 248
           GL+       P   + G+  Y++PE L +     S +D +SLG +L+ LL G+ PF    
Sbjct: 336 GLACDFSKKKPHASV-GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHK 394
Query: 249 NRQKQQ-----MIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR-----PSAQELLN 298
            + K +     + MA E         + S   + L+  LL  D NRR       AQE+  
Sbjct: 395 TKDKHEIDRMTLTMAVELP------DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 448
Query: 299 HPW 301
            P+
Sbjct: 449 SPF 451

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 87/187 (46%), Gaps = 35/187 (18%)
Query: 148 IRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV----EGYTDPVVG 203
           + QI  GL  +H AN++HRDLKP N L LN   D  LKI DFGL+ V      +T  +  
Sbjct: 132 LYQILRGLKYIHSANVLHRDLKPSN-LLLNTTSD--LKICDFGLARVADPDHDHTGFLTE 188
Query: 204 LFGSIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIM----- 257
              +  Y +PE +L  +  +KS D+WS+G IL  +LS  P F  +    +   I+     
Sbjct: 189 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 248
Query: 258 -------------AGEFSF---------YEQTWKNISSSAKQLISSLLTVDPNRRPSAQE 295
                        A  +           + + + N  S A  L+  +LT +P++R   ++
Sbjct: 249 PSQEDLNCGINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQ 308
Query: 296 LLNHPWV 302
            L HP++
Sbjct: 309 ALAHPYL 315

>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 75/303 (24%), Positives = 126/303 (41%), Gaps = 50/303 (16%)
Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIG 69
           +++ V  I+GRGGF  V    K   G+    A+K L +                      
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKM--YAMKCLDK---------------------- 224
Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
               R ++   + L  NE +++  +  +    P ++ +   +   + +  IL+L +GG+L
Sbjct: 225 ---KRIKMKQGETLALNERIMLSLV--STGDCPFIVCMSYAFHTPDKLSFILDLMNGGDL 279
Query: 130 FDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDF 189
              +     + E        +I  GL  +H   +V+RDLKP N L     E   ++I D 
Sbjct: 280 HYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDL 336
Query: 190 GLSSVEGYTDPVVGLFGSIDYVSPEALLQD-RITSKSDMWSLGVILYILLSGYPPFIAQS 248
           GL+       P   + G+  Y++PE L +     S +D +SLG +L+ LL G+ PF    
Sbjct: 337 GLACDFSKKKPHASV-GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHK 395
Query: 249 NRQKQQ-----MIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR-----PSAQELLN 298
            + K +     + MA E         + S   + L+  LL  D NRR       AQE+  
Sbjct: 396 TKDKHEIDRMTLTMAVELP------DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449
Query: 299 HPW 301
            P+
Sbjct: 450 SPF 452

>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 90/179 (50%), Gaps = 10/179 (5%)
Query: 86  NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRI-VAQERYMEVGA 144
           +E +   K++ N+S H  ++ LY V   Q  + +I E  + G L + +   + R+     
Sbjct: 48  DEFIEEAKVMMNLS-HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL 106
Query: 145 AAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV---EGYTDPV 201
             + + + E +  L     +HRDL   NCL +ND+    +K+ DFGLS     + YT  V
Sbjct: 107 LEMCKDVCEAMEYLESKQFLHRDLAARNCL-VNDQ--GVVKVSDFGLSRYVLDDEYTSSV 163
Query: 202 VGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAG 259
              F  + +  PE L+  + +SKSD+W+ GV+++ + S G  P+   +N +  + I  G
Sbjct: 164 GSKF-PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 221

>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 90/179 (50%), Gaps = 10/179 (5%)
Query: 86  NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRI-VAQERYMEVGA 144
           +E +   K++ N+S H  ++ LY V   Q  + +I E  + G L + +   + R+     
Sbjct: 44  DEFIEEAKVMMNLS-HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL 102
Query: 145 AAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV---EGYTDPV 201
             + + + E +  L     +HRDL   NCL +ND+    +K+ DFGLS     + YT  V
Sbjct: 103 LEMCKDVCEAMEYLESKQFLHRDLAARNCL-VNDQ--GVVKVSDFGLSRYVLDDEYTSSV 159
Query: 202 VGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAG 259
              F  + +  PE L+  + +SKSD+W+ GV+++ + S G  P+   +N +  + I  G
Sbjct: 160 GSKF-PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 217

>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 90/179 (50%), Gaps = 10/179 (5%)
Query: 86  NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRI-VAQERYMEVGA 144
           +E +   K++ N+S H  ++ LY V   Q  + +I E  + G L + +   + R+     
Sbjct: 55  DEFIEEAKVMMNLS-HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL 113
Query: 145 AAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV---EGYTDPV 201
             + + + E +  L     +HRDL   NCL +ND+    +K+ DFGLS     + YT  V
Sbjct: 114 LEMCKDVCEAMEYLESKQFLHRDLAARNCL-VNDQ--GVVKVSDFGLSRYVLDDEYTSSV 170
Query: 202 VGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAG 259
              F  + +  PE L+  + +SKSD+W+ GV+++ + S G  P+   +N +  + I  G
Sbjct: 171 GSKF-PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 228

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 87/187 (46%), Gaps = 35/187 (18%)
Query: 148 IRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV----EGYTDPVVG 203
           + QI  GL  +H AN++HRDLKP N L LN   D  LKI DFGL+ V      +T  +  
Sbjct: 134 LYQILRGLKYIHSANVLHRDLKPSN-LLLNTTXD--LKICDFGLARVADPDHDHTGFLTE 190
Query: 204 LFGSIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIM----- 257
              +  Y +PE +L  +  +KS D+WS+G IL  +LS  P F  +    +   I+     
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 250
Query: 258 -------------AGEFSF---------YEQTWKNISSSAKQLISSLLTVDPNRRPSAQE 295
                        A  +           + + + N  S A  L+  +LT +P++R   ++
Sbjct: 251 PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQ 310
Query: 296 LLNHPWV 302
            L HP++
Sbjct: 311 ALAHPYL 317

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 87/187 (46%), Gaps = 35/187 (18%)
Query: 148 IRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV----EGYTDPVVG 203
           + QI  GL  +H AN++HRDLKP N L LN   D  LKI DFGL+ V      +T  +  
Sbjct: 130 LYQILRGLKYIHSANVLHRDLKPSN-LLLNTTXD--LKICDFGLARVADPDHDHTGFLTE 186
Query: 204 LFGSIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIM----- 257
              +  Y +PE +L  +  +KS D+WS+G IL  +LS  P F  +    +   I+     
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 246
Query: 258 -------------AGEFSF---------YEQTWKNISSSAKQLISSLLTVDPNRRPSAQE 295
                        A  +           + + + N  S A  L+  +LT +P++R   ++
Sbjct: 247 PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQ 306
Query: 296 LLNHPWV 302
            L HP++
Sbjct: 307 ALAHPYL 313

>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689

Iteration: 1
 Score = 72.8 bits (177), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 75/303 (24%), Positives = 126/303 (41%), Gaps = 50/303 (16%)
Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIG 69
           +++ V  I+GRGGF  V    K   G+    A+K L +                      
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKM--YAMKCLDK---------------------- 224
Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
               R ++   + L  NE +++  +  +    P ++ +   +   + +  IL+L +GG+L
Sbjct: 225 ---KRIKMKQGETLALNERIMLSLV--STGDCPFIVCMSYAFHTPDKLSFILDLMNGGDL 279
Query: 130 FDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDF 189
              +     + E        +I  GL  +H   +V+RDLKP N L     E   ++I D 
Sbjct: 280 HYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDL 336
Query: 190 GLSSVEGYTDPVVGLFGSIDYVSPEALLQD-RITSKSDMWSLGVILYILLSGYPPFIAQS 248
           GL+       P   + G+  Y++PE L +     S +D +SLG +L+ LL G+ PF    
Sbjct: 337 GLACDFSKKKPHASV-GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHK 395
Query: 249 NRQKQQ-----MIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR-----PSAQELLN 298
            + K +     + MA E         + S   + L+  LL  D NRR       AQE+  
Sbjct: 396 TKDKHEIDRMTLTMAVELP------DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449
Query: 299 HPW 301
            P+
Sbjct: 450 SPF 452

>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398

Iteration: 1
 Score = 72.8 bits (177), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 93/387 (24%), Positives = 156/387 (40%), Gaps = 104/387 (26%)
Query: 5   TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXX 64
           T  + DEYE+ + +G G + VV    ++  G+  QVAIK +       P  F        
Sbjct: 49  TFDVGDEYEIIETIGNGAYGVVSSARRRLTGQ--QVAIKKI-------PNAF-------- 91
Query: 65  XXQIGFFPTRKQVSVSDALLTNEILVMR--KIVENVSPHPNVIDLYDV------YEDQNG 116
                             ++TN    +R  KI+++   H N+I + D+      Y +   
Sbjct: 92  -----------------DVVTNAKRTLRELKILKHFK-HDNIIAIKDILRPTVPYGEFKS 133
Query: 117 VHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFL 176
           V+++L+L    +L   I + +          + Q+  GL  +H A ++HRDLKP N L  
Sbjct: 134 VYVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLV- 191
Query: 177 NDREDSPLKIMDFGLSSVEGY-TDPVVGLFGSIDYV------SPEALLQ-DRITSKSDMW 228
              E+  LKI DFG++   G  T P    +   +YV      +PE +L     T   D+W
Sbjct: 192 --NENCELKIGDFGMA--RGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLW 247
Query: 229 SLGVILYILLSGYPPFIAQSNRQKQQMIM---------------AGEFSFYEQT------ 267
           S+G I   +L+    F  ++   + Q+IM               A     Y Q+      
Sbjct: 248 SVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQP 307
Query: 268 --WKNISSSAKQ----LISSLLTVDPNRRPSAQELLNHPWVIGDSAKEEEMDA------- 314
             W+ +   A +    L+  +L  +P+ R SA   L HP++      ++E D        
Sbjct: 308 VPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHDPDDEPDCAPPFDFA 367
Query: 315 -------------EIVSRLQSFNARRK 328
                         IV+ ++ F+ARR+
Sbjct: 368 FDREALTRERIKEAIVAEIEDFHARRE 394

>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695

Iteration: 1
 Score = 72.8 bits (177), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 75/303 (24%), Positives = 126/303 (41%), Gaps = 50/303 (16%)
Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIG 69
           +++ V  I+GRGGF  V    K   G+    A+K L +                      
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKM--YAMKCLDK---------------------- 224
Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
               R ++   + L  NE +++  +  +    P ++ +   +   + +  IL+L +GG+L
Sbjct: 225 ---KRIKMKQGETLALNERIMLSLV--STGDCPFIVCMSYAFHTPDKLSFILDLMNGGDL 279
Query: 130 FDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDF 189
              +     + E        +I  GL  +H   +V+RDLKP N L     E   ++I D 
Sbjct: 280 HYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDL 336
Query: 190 GLSSVEGYTDPVVGLFGSIDYVSPEALLQD-RITSKSDMWSLGVILYILLSGYPPFIAQS 248
           GL+       P   + G+  Y++PE L +     S +D +SLG +L+ LL G+ PF    
Sbjct: 337 GLACDFSKKKPHASV-GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHK 395
Query: 249 NRQKQQ-----MIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR-----PSAQELLN 298
            + K +     + MA E         + S   + L+  LL  D NRR       AQE+  
Sbjct: 396 TKDKHEIDRMTLTMAVELP------DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449
Query: 299 HPW 301
            P+
Sbjct: 450 SPF 452

>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360

Iteration: 1
 Score = 72.8 bits (177), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 87/187 (46%), Gaps = 35/187 (18%)
Query: 148 IRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV----EGYTDPVVG 203
           + QI  GL  +H AN++HRDLKP N L LN   D  LKI DFGL+ V      +T  +  
Sbjct: 130 LYQILRGLKYIHSANVLHRDLKPSN-LLLNTTXD--LKIXDFGLARVADPDHDHTGFLTE 186
Query: 204 LFGSIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIM----- 257
              +  Y +PE +L  +  +KS D+WS+G IL  +LS  P F  +    +   I+     
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 246
Query: 258 -------------AGEFSF---------YEQTWKNISSSAKQLISSLLTVDPNRRPSAQE 295
                        A  +           + + + N  S A  L+  +LT +P++R   ++
Sbjct: 247 PSQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQ 306
Query: 296 LLNHPWV 302
            L HP++
Sbjct: 307 ALAHPYL 313

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score = 72.8 bits (177), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 87/187 (46%), Gaps = 35/187 (18%)
Query: 148 IRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV----EGYTDPVVG 203
           + QI  GL  +H AN++HRDLKP N L LN   D  LKI DFGL+ V      +T  +  
Sbjct: 134 LYQILRGLKYIHSANVLHRDLKPSN-LLLNTTXD--LKICDFGLARVADPDHDHTGFLTE 190
Query: 204 LFGSIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIM----- 257
              +  Y +PE +L  +  +KS D+WS+G IL  +LS  P F  +    +   I+     
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 250
Query: 258 -------------AGEFSF---------YEQTWKNISSSAKQLISSLLTVDPNRRPSAQE 295
                        A  +           + + + N  S A  L+  +LT +P++R   ++
Sbjct: 251 PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQ 310
Query: 296 LLNHPWV 302
            L HP++
Sbjct: 311 ALAHPYL 317

>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283

Iteration: 1
 Score = 72.8 bits (177), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 90/179 (50%), Gaps = 10/179 (5%)
Query: 86  NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRI-VAQERYMEVGA 144
           +E +   K++ N+S H  ++ LY V   Q  + +I E  + G L + +   + R+     
Sbjct: 64  DEFIEEAKVMMNLS-HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL 122
Query: 145 AAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV---EGYTDPV 201
             + + + E +  L     +HRDL   NCL +ND+    +K+ DFGLS     + YT  V
Sbjct: 123 LEMCKDVCEAMEYLESKQFLHRDLAARNCL-VNDQ--GVVKVSDFGLSRYVLDDEYTSSV 179
Query: 202 VGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAG 259
              F  + +  PE L+  + +SKSD+W+ GV+++ + S G  P+   +N +  + I  G
Sbjct: 180 GSKF-PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 237

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 72.8 bits (177), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 119/249 (47%), Gaps = 41/249 (16%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      ED + V+L+  L   G   + IV  +   +     ++ Q+  G
Sbjct: 86  HENVIGLLDVFTPATSIEDFSEVYLVTTLM--GADLNNIVKSQALSDEHVQFLVYQLLRG 143
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A I+HRDLKP N       EDS L+I+DFGL+      + + G   +  Y +PE
Sbjct: 144 LKYIHSAGIIHRDLKPSNVAV---NEDSELRILDFGLA--RQADEEMTGYVATRWYRAPE 198
Query: 215 ALLQDRITSKS-DMWSLGVILYILLSG---YP--PFIAQSNRQKQQM------IMAGEFS 262
            +L     +++ D+WS+G I+  LL G   +P   +I Q  R  + +      ++A   S
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISS 258
Query: 263 FYEQTW---------KNISSS-------AKQLISSLLTVDPNRRPSAQELLNHPWVIGDS 306
            + +T+         K++SS        A  L+  +L +D ++R SA E L H +     
Sbjct: 259 EHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYH 318
Query: 307 AKEEEMDAE 315
             E+E +AE
Sbjct: 319 DPEDEPEAE 327

>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271

Iteration: 1
 Score = 72.8 bits (177), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 90/179 (50%), Gaps = 10/179 (5%)
Query: 86  NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRI-VAQERYMEVGA 144
           +E +   K++ N+S H  ++ LY V   Q  + +I E  + G L + +   + R+     
Sbjct: 49  DEFIEEAKVMMNLS-HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL 107
Query: 145 AAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV---EGYTDPV 201
             + + + E +  L     +HRDL   NCL +ND+    +K+ DFGLS     + YT  V
Sbjct: 108 LEMCKDVCEAMEYLESKQFLHRDLAARNCL-VNDQ--GVVKVSDFGLSRYVLDDEYTSSV 164
Query: 202 VGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAG 259
              F  + +  PE L+  + +SKSD+W+ GV+++ + S G  P+   +N +  + I  G
Sbjct: 165 GSKF-PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 222

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score = 72.4 bits (176), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 87/187 (46%), Gaps = 35/187 (18%)
Query: 148 IRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV----EGYTDPVVG 203
           + QI  GL  +H AN++HRDLKP N L LN   D  LKI DFGL+ V      +T  +  
Sbjct: 130 LYQILRGLKYIHSANVLHRDLKPSN-LLLNTTXD--LKICDFGLARVADPDHDHTGFLTE 186
Query: 204 LFGSIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIM----- 257
              +  Y +PE +L  +  +KS D+WS+G IL  +LS  P F  +    +   I+     
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 246
Query: 258 -------------AGEFSF---------YEQTWKNISSSAKQLISSLLTVDPNRRPSAQE 295
                        A  +           + + + N  S A  L+  +LT +P++R   ++
Sbjct: 247 PSQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQ 306
Query: 296 LLNHPWV 302
            L HP++
Sbjct: 307 ALAHPYL 313

>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306

Iteration: 1
 Score = 72.4 bits (176), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 78/154 (50%), Gaps = 12/154 (7%)
Query: 150 QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPV----VGLF 205
           +IA+G+A L+    VHRDL   NC+  +D     +KI DFG++     TD       GL 
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFT---VKIGDFGMTRDIXETDXXRKGGKGLL 194
Query: 206 GSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFY 264
             + +++PE+L     T+ SDMWS GV+L+ + S    P+   SN Q  + +M G   + 
Sbjct: 195 -PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDG--GYL 251
Query: 265 EQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN 298
           +Q   N       L+      +PN RP+  E++N
Sbjct: 252 DQP-DNCPERVTDLMRMCWQFNPNMRPTFLEIVN 284

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 72.4 bits (176), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 108/239 (45%), Gaps = 46/239 (19%)
Query: 18  LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFFPTRKQV 77
           LG+G F  V  G   T   T +VAIKTL+  G+ +P  F                     
Sbjct: 23  LGQGCFGEVWMG---TWNGTTRVAIKTLKP-GTMSPEAF--------------------- 57
Query: 78  SVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE 137
                    E  VM+K+      H  ++ LY V  ++  ++++ E  + G L D +  + 
Sbjct: 58  -------LQEAQVMKKLR-----HEKLVQLYAVVSEEP-IYIVTEYMNKGSLLDFLKGET 104
Query: 138 -RYMEVGAAA-VIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV- 194
            +Y+ +     +  QIA G+A + + N VHRDL+  N L     E+   K+ DFGL+ + 
Sbjct: 105 GKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADFGLARLI 161
Query: 195 -EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQ 251
            +       G    I + +PEA L  R T KSD+WS G++L  L + G  P+    NR+
Sbjct: 162 EDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 220

>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium Sensor 1) Length = 190

Iteration: 1
 Score = 72.4 bits (176), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 74/150 (49%), Gaps = 8/150 (5%)
Query: 359 LNEEEIQNLRIHFRTICANGDNATLSEFEEVLKAM-NMSSLVPLAPRIFDLFDNNRDGTV 417
             E+E+Q     F   C +G     + F+++ K           A  +F++FD N+DG +
Sbjct: 22  FTEKEVQQWYKGFIKDCPSG-QLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRI 80
Query: 418 DMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDC-----LPV 472
           +  E +   S   +   D+ LR  F++YD+D  G IT+ E+  ++ A+         LP 
Sbjct: 81  EFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPE 140
Query: 473 DITEPGK-LDEIFDLMDANNDGKVTFDEFR 501
           +   P K +D IF +MD N DGK+T  EF+
Sbjct: 141 EENTPEKRVDRIFAMMDKNADGKLTLQEFQ 170

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 72.0 bits (175), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 87/187 (46%), Gaps = 35/187 (18%)
Query: 148 IRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV----EGYTDPVVG 203
           + QI  GL  +H AN++HRDLKP N L LN   D  LKI DFGL+ V      +T  +  
Sbjct: 134 LYQILRGLKYIHSANVLHRDLKPSN-LLLNTTCD--LKICDFGLARVADPDHDHTGFLTE 190
Query: 204 LFGSIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIM----- 257
              +  Y +PE +L  +  +KS D+WS+G IL  +LS  P F  +    +   I+     
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 250
Query: 258 -------------AGEFSF---------YEQTWKNISSSAKQLISSLLTVDPNRRPSAQE 295
                        A  +           + + + N  S A  L+  +LT +P++R   ++
Sbjct: 251 PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQ 310
Query: 296 LLNHPWV 302
            L HP++
Sbjct: 311 ALAHPYL 317

>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442

Iteration: 1
 Score = 72.0 bits (175), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 93/387 (24%), Positives = 156/387 (40%), Gaps = 104/387 (26%)
Query: 5   TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXX 64
           T  + DEYE+ + +G G + VV    ++  G+  QVAIK +       P  F        
Sbjct: 50  TFDVGDEYEIIETIGNGAYGVVSSARRRLTGQ--QVAIKKI-------PNAF-------- 92
Query: 65  XXQIGFFPTRKQVSVSDALLTNEILVMR--KIVENVSPHPNVIDLYDV------YEDQNG 116
                             ++TN    +R  KI+++   H N+I + D+      Y +   
Sbjct: 93  -----------------DVVTNAKRTLRELKILKHFK-HDNIIAIKDILRPTVPYGEFKS 134
Query: 117 VHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFL 176
           V+++L+L    +L   I + +          + Q+  GL  +H A ++HRDLKP N L  
Sbjct: 135 VYVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLV- 192
Query: 177 NDREDSPLKIMDFGLSSVEGY-TDPVVGLFGSIDYV------SPEALLQ-DRITSKSDMW 228
              E+  LKI DFG++   G  T P    +   +YV      +PE +L     T   D+W
Sbjct: 193 --NENCELKIGDFGMA--RGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLW 248
Query: 229 SLGVILYILLSGYPPFIAQSNRQKQQMIM---------------AGEFSFYEQT------ 267
           S+G I   +L+    F  ++   + Q+IM               A     Y Q+      
Sbjct: 249 SVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQP 308
Query: 268 --WKNISSSAKQ----LISSLLTVDPNRRPSAQELLNHPWVIGDSAKEEEMDA------- 314
             W+ +   A +    L+  +L  +P+ R SA   L HP++      ++E D        
Sbjct: 309 VPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHDPDDEPDCAPPFDFA 368
Query: 315 -------------EIVSRLQSFNARRK 328
                         IV+ ++ F+ARR+
Sbjct: 369 FDREALTRERIKEAIVAEIEDFHARRE 395

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score = 72.0 bits (175), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 87/187 (46%), Gaps = 35/187 (18%)
Query: 148 IRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV----EGYTDPVVG 203
           + QI  GL  +H AN++HRDLKP N L LN   D  LKI DFGL+ V      +T  +  
Sbjct: 138 LYQILRGLKYIHSANVLHRDLKPSN-LLLNTTCD--LKICDFGLARVADPDHDHTGFLTE 194
Query: 204 LFGSIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIM----- 257
              +  Y +PE +L  +  +KS D+WS+G IL  +LS  P F  +    +   I+     
Sbjct: 195 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 254
Query: 258 -------------AGEFSF---------YEQTWKNISSSAKQLISSLLTVDPNRRPSAQE 295
                        A  +           + + + N  S A  L+  +LT +P++R   ++
Sbjct: 255 PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQ 314
Query: 296 LLNHPWV 302
            L HP++
Sbjct: 315 ALAHPYL 321

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score = 72.0 bits (175), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 87/187 (46%), Gaps = 35/187 (18%)
Query: 148 IRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV----EGYTDPVVG 203
           + QI  GL  +H AN++HRDLKP N L LN   D  LKI DFGL+ V      +T  +  
Sbjct: 130 LYQILRGLKYIHSANVLHRDLKPSN-LLLNTTCD--LKICDFGLARVADPDHDHTGFLTE 186
Query: 204 LFGSIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIM----- 257
              +  Y +PE +L  +  +KS D+WS+G IL  +LS  P F  +    +   I+     
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 246
Query: 258 -------------AGEFSF---------YEQTWKNISSSAKQLISSLLTVDPNRRPSAQE 295
                        A  +           + + + N  S A  L+  +LT +P++R   ++
Sbjct: 247 PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQ 306
Query: 296 LLNHPWV 302
            L HP++
Sbjct: 307 ALAHPYL 313

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 72.0 bits (175), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 87/187 (46%), Gaps = 35/187 (18%)
Query: 148 IRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV----EGYTDPVVG 203
           + QI  GL  +H AN++HRDLKP N L LN   D  LKI DFGL+ V      +T  +  
Sbjct: 132 LYQILRGLKYIHSANVLHRDLKPSN-LLLNTTCD--LKICDFGLARVADPDHDHTGFLTE 188
Query: 204 LFGSIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIM----- 257
              +  Y +PE +L  +  +KS D+WS+G IL  +LS  P F  +    +   I+     
Sbjct: 189 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 248
Query: 258 -------------AGEFSF---------YEQTWKNISSSAKQLISSLLTVDPNRRPSAQE 295
                        A  +           + + + N  S A  L+  +LT +P++R   ++
Sbjct: 249 PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQ 308
Query: 296 LLNHPWV 302
            L HP++
Sbjct: 309 ALAHPYL 315

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score = 72.0 bits (175), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 94/206 (45%), Gaps = 16/206 (7%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE-RYMEVGAAAVIRQIAEGLAALH 159
           HPN+I L  V      V ++ E    G L   +   + ++  +    ++R IA G+  L 
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 160 QANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV------EGYTDPVVGLFGSIDYVSP 213
               VHRDL   N L      +   K+ DFGLS V        YT    G    I + SP
Sbjct: 165 DMGFVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYT--TRGGKIPIRWTSP 219
Query: 214 EALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNIS 272
           EA+   + TS SD+WS G++L+ ++S G  P+   SN   Q +I A +  +      +  
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN---QDVIKAVDEGYRLPPPMDCP 276
Query: 273 SSAKQLISSLLTVDPNRRPSAQELLN 298
           ++  QL+      D N RP  +++++
Sbjct: 277 AALYQLMLDCWQKDRNNRPKFEQIVS 302

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 72.0 bits (175), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 91/200 (45%), Gaps = 35/200 (17%)
Query: 148 IRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV----EGYTDPVVG 203
           + QI  GL  +H AN++HRDLKP N L LN   D  LKI DFGL+ V      +T  +  
Sbjct: 132 LYQILRGLKYIHSANVLHRDLKPSN-LLLNTTCD--LKICDFGLARVADPDHDHTGFLTE 188
Query: 204 LFGSIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIM----- 257
              +  Y +PE +L  +  +KS D+WS+G IL  +LS  P F  +    +   I+     
Sbjct: 189 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 248
Query: 258 -------------AGEFSF---------YEQTWKNISSSAKQLISSLLTVDPNRRPSAQE 295
                        A  +           + + + N  S A  L+  +LT +P++R   ++
Sbjct: 249 PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQ 308
Query: 296 LLNHPWVIGDSAKEEEMDAE 315
            L HP++       +E  AE
Sbjct: 309 ALAHPYLAQYYDPSDEPIAE 328

>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364

Iteration: 1
 Score = 72.0 bits (175), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 87/187 (46%), Gaps = 35/187 (18%)
Query: 148 IRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV----EGYTDPVVG 203
           + QI  GL  +H AN++HRDLKP N L LN   D  LKI DFGL+ V      +T  +  
Sbjct: 134 LYQILRGLKYIHSANVLHRDLKPSN-LLLNTTCD--LKICDFGLARVADPDHDHTGFLTE 190
Query: 204 LFGSIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIM----- 257
              +  Y +PE +L  +  +KS D+WS+G IL  +LS  P F  +    +   I+     
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 250
Query: 258 -------------AGEFSF---------YEQTWKNISSSAKQLISSLLTVDPNRRPSAQE 295
                        A  +           + + + N  S A  L+  +LT +P++R   ++
Sbjct: 251 PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQ 310
Query: 296 LLNHPWV 302
            L HP++
Sbjct: 311 ALAHPYL 317

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score = 72.0 bits (175), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 87/187 (46%), Gaps = 35/187 (18%)
Query: 148 IRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV----EGYTDPVVG 203
           + QI  GL  +H AN++HRDLKP N L LN   D  LKI DFGL+ V      +T  +  
Sbjct: 128 LYQILRGLKYIHSANVLHRDLKPSN-LLLNTTCD--LKICDFGLARVADPDHDHTGFLTE 184
Query: 204 LFGSIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIM----- 257
              +  Y +PE +L  +  +KS D+WS+G IL  +LS  P F  +    +   I+     
Sbjct: 185 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 244
Query: 258 -------------AGEFSF---------YEQTWKNISSSAKQLISSLLTVDPNRRPSAQE 295
                        A  +           + + + N  S A  L+  +LT +P++R   ++
Sbjct: 245 PEQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQ 304
Query: 296 LLNHPWV 302
            L HP++
Sbjct: 305 ALAHPYL 311

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score = 72.0 bits (175), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 87/187 (46%), Gaps = 35/187 (18%)
Query: 148 IRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV----EGYTDPVVG 203
           + QI  GL  +H AN++HRDLKP N L LN   D  LKI DFGL+ V      +T  +  
Sbjct: 128 LYQILRGLKYIHSANVLHRDLKPSN-LLLNTTCD--LKICDFGLARVADPDHDHTGFLTE 184
Query: 204 LFGSIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIM----- 257
              +  Y +PE +L  +  +KS D+WS+G IL  +LS  P F  +    +   I+     
Sbjct: 185 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 244
Query: 258 -------------AGEFSF---------YEQTWKNISSSAKQLISSLLTVDPNRRPSAQE 295
                        A  +           + + + N  S A  L+  +LT +P++R   ++
Sbjct: 245 PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQ 304
Query: 296 LLNHPWV 302
            L HP++
Sbjct: 305 ALAHPYL 311

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score = 72.0 bits (175), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 87/187 (46%), Gaps = 35/187 (18%)
Query: 148 IRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV----EGYTDPVVG 203
           + QI  GL  +H AN++HRDLKP N L LN   D  LKI DFGL+ V      +T  +  
Sbjct: 130 LYQILRGLKYIHSANVLHRDLKPSN-LLLNTTCD--LKICDFGLARVADPDHDHTGFLTE 186
Query: 204 LFGSIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIM----- 257
              +  Y +PE +L  +  +KS D+WS+G IL  +LS  P F  +    +   I+     
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 246
Query: 258 -------------AGEFSF---------YEQTWKNISSSAKQLISSLLTVDPNRRPSAQE 295
                        A  +           + + + N  S A  L+  +LT +P++R   ++
Sbjct: 247 PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQ 306
Query: 296 LLNHPWV 302
            L HP++
Sbjct: 307 ALAHPYL 313

>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287

Iteration: 1
 Score = 72.0 bits (175), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 109/239 (45%), Gaps = 45/239 (18%)
Query: 14  VTDI-LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFFP 72
           + DI LG G F  VR+G+ +   +   VAIK L++                         
Sbjct: 13  IADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQ------------------------- 47
Query: 73  TRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDR 132
                  ++   T E++   +I+  +  +P ++ L  V + +  + L++E+  GG L   
Sbjct: 48  ------GTEKADTEEMMREAQIMHQLD-NPYIVRLIGVCQAE-ALMLVMEMAGGGPLHKF 99
Query: 133 IVAQERYMEVG-AAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGL 191
           +V +   + V   A ++ Q++ G+  L + N VHRDL   N L +N       KI DFGL
Sbjct: 100 LVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHY---AKISDFGL 156
Query: 192 SSVEG-----YTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPF 244
           S   G     YT    G +  + + +PE +   + +S+SD+WS GV ++  LS G  P+
Sbjct: 157 SKALGADDSYYTARSAGKW-PLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPY 214

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 72.0 bits (175), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 87/187 (46%), Gaps = 35/187 (18%)
Query: 148 IRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV----EGYTDPVVG 203
           + QI  GL  +H AN++HRDLKP N L LN   D  LKI DFGL+ V      +T  +  
Sbjct: 135 LYQILRGLKYIHSANVLHRDLKPSN-LLLNTTCD--LKICDFGLARVADPDHDHTGFLTE 191
Query: 204 LFGSIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIM----- 257
              +  Y +PE +L  +  +KS D+WS+G IL  +LS  P F  +    +   I+     
Sbjct: 192 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 251
Query: 258 -------------AGEFSF---------YEQTWKNISSSAKQLISSLLTVDPNRRPSAQE 295
                        A  +           + + + N  S A  L+  +LT +P++R   ++
Sbjct: 252 PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQ 311
Query: 296 LLNHPWV 302
            L HP++
Sbjct: 312 ALAHPYL 318

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score = 72.0 bits (175), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 87/187 (46%), Gaps = 35/187 (18%)
Query: 148 IRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV----EGYTDPVVG 203
           + QI  GL  +H AN++HRDLKP N L LN   D  LKI DFGL+ V      +T  +  
Sbjct: 136 LYQILRGLKYIHSANVLHRDLKPSN-LLLNTTCD--LKICDFGLARVADPDHDHTGFLTE 192
Query: 204 LFGSIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIM----- 257
              +  Y +PE +L  +  +KS D+WS+G IL  +LS  P F  +    +   I+     
Sbjct: 193 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 252
Query: 258 -------------AGEFSF---------YEQTWKNISSSAKQLISSLLTVDPNRRPSAQE 295
                        A  +           + + + N  S A  L+  +LT +P++R   ++
Sbjct: 253 PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQ 312
Query: 296 LLNHPWV 302
            L HP++
Sbjct: 313 ALAHPYL 319

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score = 72.0 bits (175), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 87/187 (46%), Gaps = 35/187 (18%)
Query: 148 IRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV----EGYTDPVVG 203
           + QI  GL  +H AN++HRDLKP N L LN   D  LKI DFGL+ V      +T  +  
Sbjct: 127 LYQILRGLKYIHSANVLHRDLKPSN-LLLNTTCD--LKICDFGLARVADPDHDHTGFLTE 183
Query: 204 LFGSIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIM----- 257
              +  Y +PE +L  +  +KS D+WS+G IL  +LS  P F  +    +   I+     
Sbjct: 184 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 243
Query: 258 -------------AGEFSF---------YEQTWKNISSSAKQLISSLLTVDPNRRPSAQE 295
                        A  +           + + + N  S A  L+  +LT +P++R   ++
Sbjct: 244 PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQ 303
Query: 296 LLNHPWV 302
            L HP++
Sbjct: 304 ALAHPYL 310

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score = 72.0 bits (175), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 87/187 (46%), Gaps = 35/187 (18%)
Query: 148 IRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV----EGYTDPVVG 203
           + QI  GL  +H AN++HRDLKP N L LN   D  LKI DFGL+ V      +T  +  
Sbjct: 134 LYQILRGLKYIHSANVLHRDLKPSN-LLLNTTCD--LKICDFGLARVADPDHDHTGFLTE 190
Query: 204 LFGSIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIM----- 257
              +  Y +PE +L  +  +KS D+WS+G IL  +LS  P F  +    +   I+     
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 250
Query: 258 -------------AGEFSF---------YEQTWKNISSSAKQLISSLLTVDPNRRPSAQE 295
                        A  +           + + + N  S A  L+  +LT +P++R   ++
Sbjct: 251 PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQ 310
Query: 296 LLNHPWV 302
            L HP++
Sbjct: 311 ALAHPYL 317

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score = 72.0 bits (175), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 87/187 (46%), Gaps = 35/187 (18%)
Query: 148 IRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV----EGYTDPVVG 203
           + QI  GL  +H AN++HRDLKP N L LN   D  LKI DFGL+ V      +T  +  
Sbjct: 150 LYQILRGLKYIHSANVLHRDLKPSN-LLLNTTCD--LKICDFGLARVADPDHDHTGFLTE 206
Query: 204 LFGSIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIM----- 257
              +  Y +PE +L  +  +KS D+WS+G IL  +LS  P F  +    +   I+     
Sbjct: 207 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 266
Query: 258 -------------AGEFSF---------YEQTWKNISSSAKQLISSLLTVDPNRRPSAQE 295
                        A  +           + + + N  S A  L+  +LT +P++R   ++
Sbjct: 267 PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQ 326
Query: 296 LLNHPWV 302
            L HP++
Sbjct: 327 ALAHPYL 333

>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (Ttk) In Complex With A Pyrimido-Diazepin Ligand Length = 313

Iteration: 1
 Score = 72.0 bits (175), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 65/235 (27%), Positives = 113/235 (48%), Gaps = 31/235 (13%)
Query: 86  NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAA 145
           NEI  + K+ ++      +I LYD       +++++E C   +L   +  ++        
Sbjct: 75  NEIAYLNKLQQHSD---KIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERK 130
Query: 146 AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVV-- 202
           +  + + E +  +HQ  IVH DLKP N L +    D  LK++DFG+++ ++     VV  
Sbjct: 131 SYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDXXXVVKD 186
Query: 203 GLFGSIDYVSPEALLQDRITSKS------------DMWSLGVILYILLSGYPPF---IAQ 247
              G+++Y+ PEA+ +D  +S+             D+WSLG ILY +  G  PF   I Q
Sbjct: 187 SQVGTVNYMPPEAI-KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ 245
Query: 248 SNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
            ++    +    E  F +   K++    + ++   L  DP +R S  ELL HP+V
Sbjct: 246 ISKLHAIIDPNHEIEFPDIPEKDL----QDVLKCCLKRDPKQRISIPELLAHPYV 296

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 71.6 bits (174), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 75/284 (26%), Positives = 124/284 (43%), Gaps = 49/284 (17%)
Query: 18  LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFFPTRKQV 77
           LG G F  V  G   T     +VAIKTL+  G+ +P  F                     
Sbjct: 17  LGNGQFGEVWMG---TWNGNTKVAIKTLKP-GTMSPESF--------------------- 51
Query: 78  SVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE 137
                    E  +M+K+      H  ++ LY V  ++  ++++ E  + G L D +   E
Sbjct: 52  -------LEEAQIMKKL-----KHDKLVQLYAVVSEEP-IYIVTEYMNKGSLLDFLKDGE 98
Query: 138 -RYMEV-GAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV- 194
            R +++     +  Q+A G+A + + N +HRDL+  N L  N       KI DFGL+ + 
Sbjct: 99  GRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGNGL---ICKIADFGLARLI 155
Query: 195 -EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQK 252
            +       G    I + +PEA L  R T KSD+WS G++L  L++ G  P+   +NR+ 
Sbjct: 156 EDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREV 215
Query: 253 QQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
            + +  G   +     ++   S  +L+      DP  RP+ + L
Sbjct: 216 LEQVERG---YRMPCPQDCPISLHELMIHCWKKDPEERPTFEYL 256

>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 94/206 (45%), Gaps = 16/206 (7%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE-RYMEVGAAAVIRQIAEGLAALH 159
           HPN+I L  V      V ++ E    G L   +   + ++  +    ++R IA G+  L 
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 160 QANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV------EGYTDPVVGLFGSIDYVSP 213
               VHRDL   N L      +   K+ DFGLS V        YT    G    I + SP
Sbjct: 165 DMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYT--TRGGKIPIRWTSP 219
Query: 214 EALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNIS 272
           EA+   + TS SD+WS G++L+ ++S G  P+   SN   Q +I A +  +      +  
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN---QDVIKAVDEGYRLPPPMDCP 276
Query: 273 SSAKQLISSLLTVDPNRRPSAQELLN 298
           ++  QL+      D N RP  +++++
Sbjct: 277 AALYQLMLDCWQKDRNNRPKFEQIVS 302

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 119/249 (47%), Gaps = 41/249 (16%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      ED + V+L+  L   G   + IV  +   +     ++ Q+  G
Sbjct: 86  HENVIGLLDVFTPATSIEDFSEVYLVTTLM--GADLNNIVKCQALSDEHVQFLVYQLLRG 143
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A I+HRDLKP N       EDS L+I+DFGL+      + + G   +  Y +PE
Sbjct: 144 LKYIHSAGIIHRDLKPSNVAV---NEDSELRILDFGLA--RQADEEMTGYVATRWYRAPE 198
Query: 215 ALLQDRITSKS-DMWSLGVILYILLSG---YP--PFIAQSNRQKQQM------IMAGEFS 262
            +L     +++ D+WS+G I+  LL G   +P   +I Q  R  + +      ++A   S
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISS 258
Query: 263 FYEQTW---------KNISSS-------AKQLISSLLTVDPNRRPSAQELLNHPWVIGDS 306
            + +T+         K++SS        A  L+  +L +D ++R SA E L H +     
Sbjct: 259 EHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYH 318
Query: 307 AKEEEMDAE 315
             E+E +AE
Sbjct: 319 DPEDEPEAE 327

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 94/206 (45%), Gaps = 16/206 (7%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE-RYMEVGAAAVIRQIAEGLAALH 159
           HPN+I L  V      V ++ E    G L   +   + ++  +    ++R IA G+  L 
Sbjct: 93  HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 152
Query: 160 QANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV------EGYTDPVVGLFGSIDYVSP 213
               VHRDL   N L      +   K+ DFGLS V        YT    G    I + SP
Sbjct: 153 DMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYT--TRGGKIPIRWTSP 207
Query: 214 EALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNIS 272
           EA+   + TS SD+WS G++L+ ++S G  P+   SN   Q +I A +  +      +  
Sbjct: 208 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN---QDVIKAVDEGYRLPPPMDCP 264
Query: 273 SSAKQLISSLLTVDPNRRPSAQELLN 298
           ++  QL+      D N RP  +++++
Sbjct: 265 AALYQLMLDCWQKDRNNRPKFEQIVS 290

>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 94/206 (45%), Gaps = 16/206 (7%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE-RYMEVGAAAVIRQIAEGLAALH 159
           HPN+I L  V      V ++ E    G L   +   + ++  +    ++R IA G+  L 
Sbjct: 103 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 162
Query: 160 QANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV------EGYTDPVVGLFGSIDYVSP 213
               VHRDL   N L      +   K+ DFGLS V        YT    G    I + SP
Sbjct: 163 DMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYT--TRGGKIPIRWTSP 217
Query: 214 EALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNIS 272
           EA+   + TS SD+WS G++L+ ++S G  P+   SN   Q +I A +  +      +  
Sbjct: 218 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN---QDVIKAVDEGYRLPPPMDCP 274
Query: 273 SSAKQLISSLLTVDPNRRPSAQELLN 298
           ++  QL+      D N RP  +++++
Sbjct: 275 AALYQLMLDCWQKDRNNRPKFEQIVS 300

>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 94/206 (45%), Gaps = 16/206 (7%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE-RYMEVGAAAVIRQIAEGLAALH 159
           HPN+I L  V      V ++ E    G L   +   + ++  +    ++R IA G+  L 
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 160 QANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV------EGYTDPVVGLFGSIDYVSP 213
               VHRDL   N L      +   K+ DFGLS V        YT    G    I + SP
Sbjct: 165 DMGAVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYT--TRGGKIPIRWTSP 219
Query: 214 EALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNIS 272
           EA+   + TS SD+WS G++L+ ++S G  P+   SN   Q +I A +  +      +  
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN---QDVIKAVDEGYRLPPPMDCP 276
Query: 273 SSAKQLISSLLTVDPNRRPSAQELLN 298
           ++  QL+      D N RP  +++++
Sbjct: 277 AALYQLMLDCWQKDRNNRPKFEQIVS 302

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 94/206 (45%), Gaps = 16/206 (7%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE-RYMEVGAAAVIRQIAEGLAALH 159
           HPN+I L  V      V ++ E    G L   +   + ++  +    ++R IA G+  L 
Sbjct: 76  HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 135
Query: 160 QANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV------EGYTDPVVGLFGSIDYVSP 213
               VHRDL   N L      +   K+ DFGLS V        YT    G    I + SP
Sbjct: 136 DMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYT--TRGGKIPIRWTSP 190
Query: 214 EALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNIS 272
           EA+   + TS SD+WS G++L+ ++S G  P+   SN   Q +I A +  +      +  
Sbjct: 191 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN---QDVIKAVDEGYRLPPPMDCP 247
Query: 273 SSAKQLISSLLTVDPNRRPSAQELLN 298
           ++  QL+      D N RP  +++++
Sbjct: 248 AALYQLMLDCWQKDRNNRPKFEQIVS 273

>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 94/206 (45%), Gaps = 16/206 (7%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE-RYMEVGAAAVIRQIAEGLAALH 159
           HPN+I L  V      V ++ E    G L   +   + ++  +    ++R IA G+  L 
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 160 QANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV------EGYTDPVVGLFGSIDYVSP 213
               VHRDL   N L      +   K+ DFGLS V        YT    G    I + SP
Sbjct: 165 DMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYT--TRGGKIPIRWTSP 219
Query: 214 EALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNIS 272
           EA+   + TS SD+WS G++L+ ++S G  P+   SN   Q +I A +  +      +  
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN---QDVIKAVDEGYRLPPPMDCP 276
Query: 273 SSAKQLISSLLTVDPNRRPSAQELLN 298
           ++  QL+      D N RP  +++++
Sbjct: 277 AALYQLMLDCWQKDRNNRPKFEQIVS 302

>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 94/206 (45%), Gaps = 16/206 (7%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE-RYMEVGAAAVIRQIAEGLAALH 159
           HPN+I L  V      V ++ E    G L   +   + ++  +    ++R IA G+  L 
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 160 QANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV------EGYTDPVVGLFGSIDYVSP 213
               VHRDL   N L      +   K+ DFGLS V        YT    G    I + SP
Sbjct: 165 DMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYT--TRGGKIPIRWTSP 219
Query: 214 EALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNIS 272
           EA+   + TS SD+WS G++L+ ++S G  P+   SN   Q +I A +  +      +  
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN---QDVIKAVDEGYRLPPPMDCP 276
Query: 273 SSAKQLISSLLTVDPNRRPSAQELLN 298
           ++  QL+      D N RP  +++++
Sbjct: 277 AALYQLMLDCWQKDRNNRPKFEQIVS 302

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 71/306 (23%), Positives = 126/306 (41%), Gaps = 55/306 (17%)
Query: 5   TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXX 64
           T++  + ++V + LG G +  V + I K  G+   VAIK                     
Sbjct: 24  TKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQI--VAIK--------------------- 60
Query: 65  XXQIGFFPTRKQVSVSDAL--LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILE 122
                      QV V   L  +  EI +M++        P+V+  Y  Y     + +++E
Sbjct: 61  -----------QVPVESDLQEIIKEISIMQQ-----CDSPHVVKYYGSYFKNTDLWIVME 104
Query: 123 LCSGGELFDRIVAQERYM-EVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRED 181
            C  G + D I  + + + E   A +++   +GL  LH    +HRD+K  N L      +
Sbjct: 105 YCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILL---NTE 161
Query: 182 SPLKIMDFGLSSVEGYTDPVVG---LFGSIDYVSPEALLQDRITSKSDMWSLGVILYILL 238
              K+ DFG++     TD +     + G+  +++PE + +      +D+WSLG+    + 
Sbjct: 162 GHAKLADFGVAG--QLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMA 219
Query: 239 SGYPPFIAQSNRQKQQMIMAGEFSFYEQT--WKNISSSAKQLISSLLTVDPNRRPSAQEL 296
            G PP+      +   MI       + +   W   S +    +   L   P +R +A +L
Sbjct: 220 EGKPPYADIHPMRAIFMIPTNPPPTFRKPELW---SDNFTDFVKQCLVKSPEQRATATQL 276
Query: 297 LNHPWV 302
           L HP+V
Sbjct: 277 LQHPFV 282

>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 94/206 (45%), Gaps = 16/206 (7%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE-RYMEVGAAAVIRQIAEGLAALH 159
           HPN+I L  V      V ++ E    G L   +   + ++  +    ++R IA G+  L 
Sbjct: 76  HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 135
Query: 160 QANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV------EGYTDPVVGLFGSIDYVSP 213
               VHRDL   N L      +   K+ DFGLS V        YT    G    I + SP
Sbjct: 136 DMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYT--TRGGKIPIRWTSP 190
Query: 214 EALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNIS 272
           EA+   + TS SD+WS G++L+ ++S G  P+   SN   Q +I A +  +      +  
Sbjct: 191 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN---QDVIKAVDEGYRLPPPMDCP 247
Query: 273 SSAKQLISSLLTVDPNRRPSAQELLN 298
           ++  QL+      D N RP  +++++
Sbjct: 248 AALYQLMLDCWQKDRNNRPKFEQIVS 273

>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 87/187 (46%), Gaps = 35/187 (18%)
Query: 148 IRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV----EGYTDPVVG 203
           + QI  GL  +H AN++HRDLKP N L LN   D  LKI DFGL+ V      +T  +  
Sbjct: 134 LYQILRGLKYIHSANVLHRDLKPSN-LLLNTTCD--LKICDFGLARVADPDHDHTGFLXE 190
Query: 204 LFGSIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIM----- 257
              +  Y +PE +L  +  +KS D+WS+G IL  +LS  P F  +    +   I+     
Sbjct: 191 XVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 250
Query: 258 -------------AGEFSF---------YEQTWKNISSSAKQLISSLLTVDPNRRPSAQE 295
                        A  +           + + + N  S A  L+  +LT +P++R   ++
Sbjct: 251 PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQ 310
Query: 296 LLNHPWV 302
            L HP++
Sbjct: 311 ALAHPYL 317

>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 87/187 (46%), Gaps = 35/187 (18%)
Query: 148 IRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV----EGYTDPVVG 203
           + QI  GL  +H AN++HRDLKP N L LN   D  LKI DFGL+ V      +T  +  
Sbjct: 135 LYQILRGLKYIHSANVLHRDLKPSN-LLLNTTCD--LKICDFGLARVADPDHDHTGFLXE 191
Query: 204 LFGSIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIM----- 257
              +  Y +PE +L  +  +KS D+WS+G IL  +LS  P F  +    +   I+     
Sbjct: 192 XVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 251
Query: 258 -------------AGEFSF---------YEQTWKNISSSAKQLISSLLTVDPNRRPSAQE 295
                        A  +           + + + N  S A  L+  +LT +P++R   ++
Sbjct: 252 PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQ 311
Query: 296 LLNHPWV 302
            L HP++
Sbjct: 312 ALAHPYL 318

>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 94/206 (45%), Gaps = 16/206 (7%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE-RYMEVGAAAVIRQIAEGLAALH 159
           HPN+I L  V      V ++ E    G L   +   + ++  +    ++R IA G+  L 
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 160 QANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV------EGYTDPVVGLFGSIDYVSP 213
               VHRDL   N L      +   K+ DFGLS V        YT    G    I + SP
Sbjct: 165 DMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYT--TRGGKIPIRWTSP 219
Query: 214 EALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNIS 272
           EA+   + TS SD+WS G++L+ ++S G  P+   SN   Q +I A +  +      +  
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN---QDVIKAVDEGYRLPPPMDCP 276
Query: 273 SSAKQLISSLLTVDPNRRPSAQELLN 298
           ++  QL+      D N RP  +++++
Sbjct: 277 AALYQLMLDCWQKDRNNRPKFEQIVS 302

>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 78/154 (50%), Gaps = 12/154 (7%)
Query: 150 QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS----SVEGYTDPVVGLF 205
           +IA+G+A L+    VHR+L   NC+  +D     +KI DFG++      + Y     GL 
Sbjct: 139 EIADGMAYLNAKKFVHRNLAARNCMVAHDFT---VKIGDFGMTRDIYETDYYRKGGKGLL 195
Query: 206 GSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFY 264
             + +++PE+L     T+ SDMWS GV+L+ + S    P+   SN Q  + +M G   + 
Sbjct: 196 -PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDG--GYL 252
Query: 265 EQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN 298
           +Q   N       L+      +PN RP+  E++N
Sbjct: 253 DQP-DNCPERVTDLMRMCWQFNPNMRPTFLEIVN 285

>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 94/206 (45%), Gaps = 16/206 (7%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE-RYMEVGAAAVIRQIAEGLAALH 159
           HPN+I L  V      V ++ E    G L   +   + ++  +    ++R IA G+  L 
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 160 QANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV------EGYTDPVVGLFGSIDYVSP 213
               VHRDL   N L      +   K+ DFGLS V        YT    G    I + SP
Sbjct: 165 DMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYT--TRGGKIPIRWTSP 219
Query: 214 EALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNIS 272
           EA+   + TS SD+WS G++L+ ++S G  P+   SN   Q +I A +  +      +  
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN---QDVIKAVDEGYRLPPPMDCP 276
Query: 273 SSAKQLISSLLTVDPNRRPSAQELLN 298
           ++  QL+      D N RP  +++++
Sbjct: 277 AALYQLMLDCWQKDRNNRPKFEQIVS 302

>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 78/154 (50%), Gaps = 12/154 (7%)
Query: 150 QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS----SVEGYTDPVVGLF 205
           +IA+G+A L+    VHR+L   NC+  +D     +KI DFG++      + Y     GL 
Sbjct: 138 EIADGMAYLNAKKFVHRNLAARNCMVAHDFT---VKIGDFGMTRDIYETDYYRKGGKGLL 194
Query: 206 GSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFY 264
             + +++PE+L     T+ SDMWS GV+L+ + S    P+   SN Q  + +M G   + 
Sbjct: 195 -PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDG--GYL 251
Query: 265 EQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN 298
           +Q   N       L+      +PN RP+  E++N
Sbjct: 252 DQP-DNCPERVTDLMRMCWQFNPNMRPTFLEIVN 284

>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 12/154 (7%)
Query: 150 QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS----SVEGYTDPVVGLF 205
           +IA+G+A L+    VHRDL   NC+  +D     +KI DFG++      + Y     GL 
Sbjct: 137 EIADGMAYLNAKKFVHRDLAARNCMVAHDFT---VKIGDFGMTRDIYETDYYRKGGKGLL 193
Query: 206 GSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFY 264
             + +++PE+L     T+ SDMWS GV+L+ + S    P+   SN Q  + +M G   + 
Sbjct: 194 -PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDG--GYL 250
Query: 265 EQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN 298
           +Q   N       L+      +P  RP+  E++N
Sbjct: 251 DQP-DNCPERVTDLMRMCWQFNPKMRPTFLEIVN 283

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 20/217 (9%)
Query: 86  NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAA 145
            E  VM++I      HPN++ L  V   +   +++ E    G L D +    R  EV A 
Sbjct: 77  KEAAVMKEI-----KHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNR-EEVTAV 130
Query: 146 AVIR---QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV---EGYTD 199
            ++    QI+  +  L + N +HRDL   NCL     E+  +K+ DFGLS +   + YT 
Sbjct: 131 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENHVVKVADFGLSRLMTGDTYTA 187
Query: 200 PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILLSGYPPFIAQSNRQKQQMIMA 258
                F  I + +PE+L  +  + KSD+W+ GV+L+ I   G  P+      Q   ++  
Sbjct: 188 HAGAKF-PIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEK 246
Query: 259 GEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQE 295
           G   +  +  +       +L+ +     P  RPS  E
Sbjct: 247 G---YRMEQPEGCPPKVYELMRACWKWSPADRPSFAE 280

>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 12/154 (7%)
Query: 150 QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS----SVEGYTDPVVGLF 205
           +IA+G+A L+    VHRDL   NC+  +D     +KI DFG++      + Y     GL 
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFT---VKIGDFGMTRDIYETDYYRKGGKGLL 194
Query: 206 GSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFY 264
             + +++PE+L     T+ SDMWS GV+L+ + S    P+   SN Q  + +M G   + 
Sbjct: 195 -PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDG--GYL 251
Query: 265 EQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN 298
           +Q   N       L+      +P  RP+  E++N
Sbjct: 252 DQP-DNCPERVTDLMRMCWQFNPKMRPTFLEIVN 284

>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 16/206 (7%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE-RYMEVGAAAVIRQIAEGLAALH 159
           HPN+I L  V      V ++ E    G L   +   + ++  +    ++R IA G+  L 
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 160 QANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV------EGYTDPVVGLFGSIDYVSP 213
               VHRDL   N L      +   K+ DFGL+ V        YT    G    I + SP
Sbjct: 165 DMGYVHRDLAARNILI---NSNLVCKVSDFGLARVLEDDPEAAYT--TRGGKIPIRWTSP 219
Query: 214 EALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNIS 272
           EA+   + TS SD+WS G++L+ ++S G  P+   SN   Q +I A +  +      +  
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN---QDVIKAVDEGYRLPPPMDCP 276
Query: 273 SSAKQLISSLLTVDPNRRPSAQELLN 298
           ++  QL+      D N RP  +++++
Sbjct: 277 AALYQLMLDCWQKDRNNRPKFEQIVS 302

>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 104/231 (45%), Gaps = 22/231 (9%)
Query: 80  SDALLTNEILVMRKIVENVSPHPNVIDLYDVY--EDQNGVHLILELCSGG--ELFDRIVA 135
            +A +  EI ++R++      H NVI L DV   E++  +++++E C  G  E+ D  V 
Sbjct: 49  GEANVKKEIQLLRRLR-----HKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDS-VP 102
Query: 136 QERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVE 195
           ++R+    A     Q+ +GL  LH   IVH+D+KP N L         LKI   G++   
Sbjct: 103 EKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTT---GGTLKISALGVAEAL 159
Query: 196 ---GYTDPVVGLFGSIDYVSPEAL--LQDRITSKSDMWSLGVILYILLSGYPPFIAQSNR 250
                 D      GS  +  PE    L      K D+WS GV LY + +G  PF   +  
Sbjct: 160 HPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIY 219
Query: 251 QKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPW 301
           +  + I  G ++        +S     L+  +L  +P +R S +++  H W
Sbjct: 220 KLFENIGKGSYAIPGDCGPPLSD----LLKGMLEYEPAKRFSIRQIRQHSW 266

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 79/160 (49%), Gaps = 20/160 (12%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVI-------RQIAE 153
           H  ++ LY V   +  +++I E  + G L D + + E     G   ++        QIAE
Sbjct: 67  HDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDE-----GGKVLLPKLIDFSAQIAE 121
Query: 154 GLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV---EGYTDPVVGLFGSIDY 210
           G+A + + N +HRDL+  N L     E    KI DFGL+ V     YT      F  I +
Sbjct: 122 GMAYIERKNYIHRDLRAANVLV---SESLMCKIADFGLARVIEDNEYTAREGAKF-PIKW 177
Query: 211 VSPEALLQDRITSKSDMWSLGVILY-ILLSGYPPFIAQSN 249
            +PEA+     T KSD+WS G++LY I+  G  P+  ++N
Sbjct: 178 TAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTN 217

>pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 84/333 (25%), Positives = 141/333 (42%), Gaps = 77/333 (23%)
Query: 18  LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFFPTRKQV 77
           +G G +  V   I K  GE  +VAIK L R                        P + ++
Sbjct: 50  VGSGAYGSVCSAIDKRSGE--KVAIKKLSR------------------------PFQSEI 83
Query: 78  SVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGV------HLILELCSGGELFD 131
               A    E+L+++ +      H NVI L DV+   + +      +L++          
Sbjct: 84  FAKRAY--RELLLLKHM-----QHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTD--LQ 134
Query: 132 RIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGL 191
           +I+  E + E     ++ Q+ +GL  +H A +VHRDLKP N   L   ED  LKI+DFGL
Sbjct: 135 KIMGME-FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGN---LAVNEDCELKILDFGL 190
Query: 192 SSVEGYTDP-VVGLFGSIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSN 249
           +    + D  + G   +  Y +PE +L     +++ D+WS+G I+  +L+G   F  +  
Sbjct: 191 AR---HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY 247
Query: 250 RQKQQMIM------AGEF----------SF-----------YEQTWKNISSSAKQLISSL 282
             +   I+        EF          S+           + Q +   S  A  L+  +
Sbjct: 248 LDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKM 307
Query: 283 LTVDPNRRPSAQELLNHPWVIGDSAKEEEMDAE 315
           L +D ++R +A + L HP+       EEE +A+
Sbjct: 308 LELDVDKRLTAAQALTHPFFEPFRDPEEETEAQ 340

>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 12/154 (7%)
Query: 150 QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPV----VGLF 205
           +IA+G+A L+    VHRDL   NC+  +D     +KI DFG++     TD       GL 
Sbjct: 135 EIADGMAYLNAKKFVHRDLAARNCMVAHD---FTVKIGDFGMTRDIXETDXXRKGGKGLL 191
Query: 206 GSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFY 264
             + +++PE+L     T+ SDMWS GV+L+ + S    P+   SN Q  + +M G   + 
Sbjct: 192 -PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDG--GYL 248
Query: 265 EQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN 298
           +Q   N       L+      +P  RP+  E++N
Sbjct: 249 DQP-DNCPERVTDLMRMCWQFNPKMRPTFLEIVN 281

>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70 Length = 613

Iteration: 1
 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 109/239 (45%), Gaps = 45/239 (18%)
Query: 14  VTDI-LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFFP 72
           + DI LG G F  VR+G+ +   +   VAIK L++                         
Sbjct: 339 IADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQ------------------------- 373
Query: 73  TRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDR 132
                  ++   T E++   +I+  +  +P ++ L  V + +  + L++E+  GG L   
Sbjct: 374 ------GTEKADTEEMMREAQIMHQLD-NPYIVRLIGVCQAE-ALMLVMEMAGGGPLHKF 425
Query: 133 IVAQERYMEVG-AAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGL 191
           +V +   + V   A ++ Q++ G+  L + N VHR+L   N L +N       KI DFGL
Sbjct: 426 LVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHY---AKISDFGL 482
Query: 192 SSVEG-----YTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPF 244
           S   G     YT    G +  + + +PE +   + +S+SD+WS GV ++  LS G  P+
Sbjct: 483 SKALGADDSYYTARSAGKW-PLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPY 540

>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306

Iteration: 1
 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 12/154 (7%)
Query: 150 QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPV----VGLF 205
           +IA+G+A L+    VHRDL   NC+  +D     +KI DFG++     TD       GL 
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFT---VKIGDFGMTRDIXETDXXRKGGKGLL 194
Query: 206 GSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFY 264
             + +++PE+L     T+ SDMWS GV+L+ + S    P+   SN Q  + +M G   + 
Sbjct: 195 -PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDG--GYL 251
Query: 265 EQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN 298
           +Q   N       L+      +P  RP+  E++N
Sbjct: 252 DQP-DNCPERVTDLMRMCWQFNPKMRPTFLEIVN 284

>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265

Iteration: 1
 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 89/179 (49%), Gaps = 10/179 (5%)
Query: 86  NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRI-VAQERYMEVGA 144
           +E +   K++ N+S H  ++ LY V   Q  + +I E  + G L + +   + R+     
Sbjct: 49  DEFIEEAKVMMNLS-HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL 107
Query: 145 AAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV---EGYTDPV 201
             + + + E +  L     +HRDL   NCL +ND+    +K+ DFGLS     + YT   
Sbjct: 108 LEMCKDVCEAMEYLESKQFLHRDLAARNCL-VNDQ--GVVKVSDFGLSRYVLDDEYTSSR 164
Query: 202 VGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAG 259
              F  + +  PE L+  + +SKSD+W+ GV+++ + S G  P+   +N +  + I  G
Sbjct: 165 GSKF-PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 222

>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373

Iteration: 1
 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 93/206 (45%), Gaps = 16/206 (7%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE-RYMEVGAAAVIRQIAEGLAALH 159
           HPN+I L  V      V ++ E    G L   +   + ++  +    ++R IA G+  L 
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 160 QANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV------EGYTDPVVGLFGSIDYVSP 213
               VHRDL   N L      +   K+ DFGL  V        YT    G    I + SP
Sbjct: 165 DMGYVHRDLAARNILI---NSNLVCKVSDFGLGRVLEDDPEAAYT--TRGGKIPIRWTSP 219
Query: 214 EALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNIS 272
           EA+   + TS SD+WS G++L+ ++S G  P+   SN   Q +I A +  +      +  
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN---QDVIKAVDEGYRLPPPMDCP 276
Query: 273 SSAKQLISSLLTVDPNRRPSAQELLN 298
           ++  QL+      D N RP  +++++
Sbjct: 277 AALYQLMLDCWQKDRNNRPKFEQIVS 302

>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 76/154 (49%), Gaps = 12/154 (7%)
Query: 150 QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS----SVEGYTDPVVGLF 205
           +IA+G+A L+    VHRDL   NC+  +D     +KI DFG++        Y     GL 
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFT---VKIGDFGMTRDIYETAYYRKGGKGLL 194
Query: 206 GSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFY 264
             + +++PE+L     T+ SDMWS GV+L+ + S    P+   SN Q  + +M G   + 
Sbjct: 195 -PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDG--GYL 251
Query: 265 EQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN 298
           +Q   N       L+      +P  RP+  E++N
Sbjct: 252 DQP-DNCPERVTDLMRMCWQFNPKMRPTFLEIVN 284

>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283

Iteration: 1
 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 89/178 (50%), Gaps = 8/178 (4%)
Query: 86  NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRI-VAQERYMEVGA 144
           +E +   K++ N+S H  ++ LY V   Q  + +I E  + G L + +   + R+     
Sbjct: 64  DEFIEEAKVMMNLS-HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL 122
Query: 145 AAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS--VEGYTDPVV 202
             + + + E +  L     +HRDL   NCL +ND+    +K+ DFGLS   ++      V
Sbjct: 123 LEMCKDVCEAMEYLESKQFLHRDLAARNCL-VNDQ--GVVKVSDFGLSRYVLDDEETSSV 179
Query: 203 GLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAG 259
           G    + +  PE L+  + +SKSD+W+ GV+++ + S G  P+   +N +  + I  G
Sbjct: 180 GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 237

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 118/249 (47%), Gaps = 41/249 (16%)
Query: 101 HPNVIDLYDVY------EDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG 154
           H NVI L DV+      ED + V+L+  L   G   + IV  +   +     ++ Q+  G
Sbjct: 78  HENVIGLLDVFTPATSIEDFSEVYLVTTLM--GADLNNIVKCQALSDEHVQFLVYQLLRG 135
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           L  +H A I+HRDLKP N       ED  L+I+DFGL+      + + G   +  Y +PE
Sbjct: 136 LKYIHSAGIIHRDLKPSNVAV---NEDCELRILDFGLA--RQADEEMTGYVATRWYRAPE 190
Query: 215 ALLQDRITSKS-DMWSLGVILYILLSG---YP--PFIAQSNRQKQQM------IMAGEFS 262
            +L     +++ D+WS+G I+  LL G   +P   +I Q  R  + +      ++A   S
Sbjct: 191 IMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISS 250
Query: 263 FYEQTW---------KNISSS-------AKQLISSLLTVDPNRRPSAQELLNHPWVIGDS 306
            + +T+         K++SS        A  L+  +L +D ++R SA E L H +     
Sbjct: 251 EHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYH 310
Query: 307 AKEEEMDAE 315
             E+E +AE
Sbjct: 311 DPEDEPEAE 319

>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex With An Indirubin Ligand Length = 429

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/182 (32%), Positives = 87/182 (47%), Gaps = 11/182 (6%)
Query: 103 NVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG----LAAL 158
           NVI + + +  +N + +  EL S   L++ I  ++   +  +  ++R+ A      L AL
Sbjct: 160 NVIHMLENFTFRNHICMTFELLSM-NLYELI--KKNKFQGFSLPLVRKFAHSILQCLDAL 216
Query: 159 HQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQ 218
           H+  I+H DLKPEN L L  +  S +K++DFG S  E     V     S  Y +PE +L 
Sbjct: 217 HKNRIIHCDLKPENIL-LKQQGRSGIKVIDFGSSCYE--HQRVYTXIQSRFYRAPEVILG 273
Query: 219 DRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQL 278
            R     DMWSLG IL  LL+GY P +   +   Q   M        Q   + S  AK  
Sbjct: 274 ARYGMPIDMWSLGCILAELLTGY-PLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNF 332
Query: 279 IS 280
           +S
Sbjct: 333 VS 334

>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344

Iteration: 1
 Score = 69.7 bits (169), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 93/204 (45%), Gaps = 16/204 (7%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGEL--FDRIVAQERYMEVGAAA------VIRQIA 152
           H N++    V        ++LEL +GG+L  F R   + R  +  + A      V R IA
Sbjct: 110 HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIA 168
Query: 153 EGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS---VEGYTDPVVGLFGSID 209
            G   L + + +HRD+   NCL          KI DFG++      GY          + 
Sbjct: 169 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVK 228
Query: 210 YVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTW 268
           ++ PEA ++   TSK+D WS GV+L+ + S GY P+ ++SN++  + + +G         
Sbjct: 229 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG---RMDPP 285
Query: 269 KNISSSAKQLISSLLTVDPNRRPS 292
           KN      ++++      P  RP+
Sbjct: 286 KNCPGPVYRIMTQCWQHQPEDRPN 309

>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367

Iteration: 1
 Score = 69.7 bits (169), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 93/204 (45%), Gaps = 16/204 (7%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGEL--FDRIVAQERYMEVGAAA------VIRQIA 152
           H N++    V        ++LEL +GG+L  F R   + R  +  + A      V R IA
Sbjct: 133 HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIA 191
Query: 153 EGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS---VEGYTDPVVGLFGSID 209
            G   L + + +HRD+   NCL          KI DFG++      GY          + 
Sbjct: 192 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVK 251
Query: 210 YVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTW 268
           ++ PEA ++   TSK+D WS GV+L+ + S GY P+ ++SN++  + + +G         
Sbjct: 252 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG---RMDPP 308
Query: 269 KNISSSAKQLISSLLTVDPNRRPS 292
           KN      ++++      P  RP+
Sbjct: 309 KNCPGPVYRIMTQCWQHQPEDRPN 332

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 69.7 bits (169), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 80/149 (53%), Gaps = 11/149 (7%)
Query: 101 HPNVIDLYDV-YEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIR---QIAEGLA 156
           H N++ L  V  E++ G++++ E  + G L D + ++ R + +G   +++    + E + 
Sbjct: 73  HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAME 131
Query: 157 ALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEAL 216
            L   N VHRDL   N L     ED+  K+ DFGL+     T     L   + + +PEAL
Sbjct: 132 YLEGNNFVHRDLAARNVLV---SEDNVAKVSDFGLTKEASSTQDTGKL--PVKWTAPEAL 186
Query: 217 LQDRITSKSDMWSLGVILYILLS-GYPPF 244
            + + ++KSD+WS G++L+ + S G  P+
Sbjct: 187 REKKFSTKSDVWSFGILLWEIYSFGRVPY 215

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 69.7 bits (169), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 20/160 (12%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVI-------RQIAE 153
           H  ++ LY V   +  +++I E  + G L D + + E     G   ++        QIAE
Sbjct: 66  HDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDE-----GGKVLLPKLIDFSAQIAE 120
Query: 154 GLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV---EGYTDPVVGLFGSIDY 210
           G+A + + N +HRDL+  N L     E    KI DFGL+ V     YT      F  I +
Sbjct: 121 GMAYIERKNYIHRDLRAANVLV---SESLMCKIADFGLARVIEDNEYTAREGAKF-PIKW 176
Query: 211 VSPEALLQDRITSKSDMWSLGVILY-ILLSGYPPFIAQSN 249
            +PEA+     T KS++WS G++LY I+  G  P+  ++N
Sbjct: 177 TAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTN 216

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 69.7 bits (169), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 80/149 (53%), Gaps = 11/149 (7%)
Query: 101 HPNVIDLYDV-YEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIR---QIAEGLA 156
           H N++ L  V  E++ G++++ E  + G L D + ++ R + +G   +++    + E + 
Sbjct: 58  HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAME 116
Query: 157 ALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEAL 216
            L   N VHRDL   N L     ED+  K+ DFGL+     T     L   + + +PEAL
Sbjct: 117 YLEGNNFVHRDLAARNVLV---SEDNVAKVSDFGLTKEASSTQDTGKL--PVKWTAPEAL 171
Query: 217 LQDRITSKSDMWSLGVILYILLS-GYPPF 244
            + + ++KSD+WS G++L+ + S G  P+
Sbjct: 172 REKKFSTKSDVWSFGILLWEIYSFGRVPY 200

>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) Length = 429

Iteration: 1
 Score = 69.7 bits (169), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 52/144 (36%), Positives = 76/144 (52%), Gaps = 10/144 (6%)
Query: 103 NVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG----LAAL 158
           NVI + + +  +N + +  EL S   L++ I  ++   +  +  ++R+ A      L AL
Sbjct: 160 NVIHMLENFTFRNHICMTFELLSM-NLYELI--KKNKFQGFSLPLVRKFAHSILQCLDAL 216
Query: 159 HQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQ 218
           H+  I+H DLKPEN L L  +  S +K++DFG S  E     V     S  Y +PE +L 
Sbjct: 217 HKNRIIHCDLKPENIL-LKQQGRSGIKVIDFGSSCYE--HQRVYXXIQSRFYRAPEVILG 273
Query: 219 DRITSKSDMWSLGVILYILLSGYP 242
            R     DMWSLG IL  LL+GYP
Sbjct: 274 ARYGMPIDMWSLGCILAELLTGYP 297

>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41 Length = 417

Iteration: 1
 Score = 69.7 bits (169), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 59/182 (32%), Positives = 87/182 (47%), Gaps = 11/182 (6%)
Query: 103 NVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEG----LAAL 158
           NVI + + +  +N + +  EL S   L++ I  ++   +  +  ++R+ A      L AL
Sbjct: 160 NVIHMLENFTFRNHICMTFELLSM-NLYELI--KKNKFQGFSLPLVRKFAHSILQCLDAL 216
Query: 159 HQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQ 218
           H+  I+H DLKPEN L L  +  S +K++DFG S  E     V     S  Y +PE +L 
Sbjct: 217 HKNRIIHCDLKPENIL-LKQQGRSGIKVIDFGSSCYE--HQRVYTXIQSRFYRAPEVILG 273
Query: 219 DRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQL 278
            R     DMWSLG IL  LL+GY P +   +   Q   M        Q   + S  AK  
Sbjct: 274 ARYGMPIDMWSLGCILAELLTGY-PLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNF 332
Query: 279 IS 280
           +S
Sbjct: 333 VS 334

>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In Complex With The Bisindoylmaleide Inhibitor Bim Viii Length = 412

Iteration: 1
 Score = 69.7 bits (169), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 75/319 (23%), Positives = 131/319 (41%), Gaps = 56/319 (17%)
Query: 3   QETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXX 62
           +E R   D++E+  ++GRG FS              +VA+  +++ G             
Sbjct: 54  KEVRLQRDDFEILKVIGRGAFS--------------EVAVVKMKQTGQVY---------- 89
Query: 63  XXXXQIGFFPTRKQVSVSDALLTNEILVMRK---IVENVSPHPNVIDLYDVYEDQNGVHL 119
                       K ++  D L   E+   R+   ++ N      +  L+  ++D+N ++L
Sbjct: 90  ----------AMKIMNKWDMLKRGEVSCFREERDVLVN-GDRRWITQLHFAFQDENYLYL 138
Query: 120 ILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLND 178
           ++E   GG+L   +    ER     A   + +I   + ++H+   VHRD+KP+N L   D
Sbjct: 139 VMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILL--D 196
Query: 179 REDSPLKIMDFGLS---SVEGYTDPVVGLFGSIDYVSPEAL-------LQDRITSKSDMW 228
           R    +++ DFG       +G    +V + G+ DY+SPE L              + D W
Sbjct: 197 RCGH-IRLADFGSCLKLRADGTVRSLVAV-GTPDYLSPEILQAVGGGPGTGSYGPECDWW 254
Query: 229 SLGVILYILLSGYPPFIAQSNRQKQ-QMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDP 287
           +LGV  Y +  G  PF A S  +   +++   E        + +   A+  I  LL    
Sbjct: 255 ALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLCPPE 314
Query: 288 NR--RPSAQELLNHPWVIG 304
            R  R  A +   HP+  G
Sbjct: 315 TRLGRGGAGDFRTHPFFFG 333

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 69.7 bits (169), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 80/149 (53%), Gaps = 11/149 (7%)
Query: 101 HPNVIDLYDV-YEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIR---QIAEGLA 156
           H N++ L  V  E++ G++++ E  + G L D + ++ R + +G   +++    + E + 
Sbjct: 245 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAME 303
Query: 157 ALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEAL 216
            L   N VHRDL   N L     ED+  K+ DFGL+     T     L   + + +PEAL
Sbjct: 304 YLEGNNFVHRDLAARNVLV---SEDNVAKVSDFGLTKEASSTQDTGKL--PVKWTAPEAL 358
Query: 217 LQDRITSKSDMWSLGVILYILLS-GYPPF 244
            + + ++KSD+WS G++L+ + S G  P+
Sbjct: 359 REKKFSTKSDVWSFGILLWEIYSFGRVPY 387

>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353

Iteration: 1
 Score = 69.3 bits (168), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 83/333 (24%), Positives = 141/333 (42%), Gaps = 77/333 (23%)
Query: 18  LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFFPTRKQV 77
           +G G +  V   I K  GE  +VAIK L R                        P + ++
Sbjct: 32  VGSGAYGSVCSAIDKRSGE--KVAIKKLSR------------------------PFQSEI 65
Query: 78  SVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGV------HLILELCSGGELFD 131
               A    E+L+++ +      H NVI L DV+   + +      +L++          
Sbjct: 66  FAKRAY--RELLLLKHM-----QHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTD--LQ 116
Query: 132 RIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGL 191
           +I+   ++ E     ++ Q+ +GL  +H A +VHRDLKP N   L   ED  LKI+DFGL
Sbjct: 117 KIMGL-KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGN---LAVNEDCELKILDFGL 172
Query: 192 SSVEGYTDP-VVGLFGSIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSN 249
           +    + D  + G   +  Y +PE +L     +++ D+WS+G I+  +L+G   F  +  
Sbjct: 173 AR---HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY 229
Query: 250 RQKQQMIM------AGEF----------SF-----------YEQTWKNISSSAKQLISSL 282
             +   I+        EF          S+           + Q +   S  A  L+  +
Sbjct: 230 LDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKM 289
Query: 283 LTVDPNRRPSAQELLNHPWVIGDSAKEEEMDAE 315
           L +D ++R +A + L HP+       EEE +A+
Sbjct: 290 LELDVDKRLTAAQALTHPFFEPFRDPEEETEAQ 322

>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303

Iteration: 1
 Score = 68.9 bits (167), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 92/198 (46%), Gaps = 22/198 (11%)
Query: 122 ELCSGGELFDRIVAQERYMEVGAAA-VIRQIAEGLAALHQANIVHRDLKPENCLFLNDRE 180
           E C    L+D I ++    +      + RQI E L+ +H   I+HR+LKP N +F++  E
Sbjct: 95  EYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRNLKPXN-IFID--E 151
Query: 181 DSPLKIMDFGLS---------------SVEGYTDPVVGLFGSIDYVSPEAL-LQDRITSK 224
              +KI DFGL+               ++ G +D +    G+  YV+ E L        K
Sbjct: 152 SRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEK 211
Query: 225 SDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLT 284
            D +SLG+I +  +  +     + N  K+   ++ EF        N     K++I  L+ 
Sbjct: 212 IDXYSLGIIFFEXIYPFSTGXERVNILKKLRSVSIEFP--PDFDDNKXKVEKKIIRLLID 269
Query: 285 VDPNRRPSAQELLNHPWV 302
            DPN+RP A+ LLN  W+
Sbjct: 270 HDPNKRPGARTLLNSGWL 287

>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333

Iteration: 1
 Score = 68.9 bits (167), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 103/225 (45%), Gaps = 29/225 (12%)
Query: 93  KIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVI---- 148
           KI+ ++  H N+++L         V +I E C  G+L + +  + R +E   A  I    
Sbjct: 101 KIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANST 160
Query: 149 ----------RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYT 198
                      Q+A+G+A L   N +HRD+   N L  N       KI DFGL+  +   
Sbjct: 161 LSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHV---AKIGDFGLAR-DIMN 216
Query: 199 DPVVGLFGS----IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQ 253
           D    + G+    + +++PE++     T +SD+WS G++L+ + S G  P+       K 
Sbjct: 217 DSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKF 276
Query: 254 QMIMAGEFSFYEQTW--KNISSSAKQLISSLLTVDPNRRPSAQEL 296
             ++   +   +  +  KNI S    ++ +   ++P  RP+ Q++
Sbjct: 277 YKLVKDGYQMAQPAFAPKNIYS----IMQACWALEPTHRPTFQQI 317

>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295

Iteration: 1
 Score = 68.9 bits (167), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 95/207 (45%), Gaps = 18/207 (8%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE--RYMEVGAAAVIRQIAEGLAAL 158
           HPN+I L  V      V ++ E    G L D  + +   ++  +    ++R I+ G+  L
Sbjct: 82  HPNIIHLEGVVTKSKPVMIVTEYMENGSL-DTFLKKNDGQFTVIQLVGMLRGISAGMKYL 140
Query: 159 HQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV------EGYTDPVVGLFGSIDYVS 212
                VHRDL   N L      +   K+ DFGLS V        YT    G    I + +
Sbjct: 141 SDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYT--TRGGKIPIRWTA 195
Query: 213 PEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNI 271
           PEA+   + TS SD+WS G++++ ++S G  P+   +N   Q +I A E  +   +  + 
Sbjct: 196 PEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTN---QDVIKAVEEGYRLPSPMDC 252
Query: 272 SSSAKQLISSLLTVDPNRRPSAQELLN 298
            ++  QL+      + N RP   E++N
Sbjct: 253 PAALYQLMLDCWQKERNSRPKFDEIVN 279

>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase Domain Phosphorylated On Ser172 Length = 319

Iteration: 1
 Score = 68.6 bits (166), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 112/262 (42%), Gaps = 52/262 (19%)
Query: 12  YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFF 71
           + ++DILG+G  + V RG  K  G+    AIK    I    P                  
Sbjct: 11  WLLSDILGQGATANVFRGRHKKTGDL--FAIKVFNNISFLRP------------------ 50
Query: 72  PTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVH--LILELCSGGEL 129
                V V       E  V++K+      H N++ L+ + E+    H  LI+E C  G L
Sbjct: 51  -----VDVQ----MREFEVLKKL-----NHKNIVKLFAIEEETTTRHKVLIMEFCPCGSL 96
Query: 130 FDRIVAQERYMEVGAAA-----VIRQIAEGLAALHQANIVHRDLKPENCL-FLNDREDSP 183
           +   V +E     G        V+R +  G+  L +  IVHR++KP N +  + +   S 
Sbjct: 97  Y--TVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSV 154
Query: 184 LKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE----ALL----QDRITSKSDMWSLGVILY 235
            K+ DFG +      +  V L+G+ +Y+ P+    A+L    Q +  +  D+WS+GV  Y
Sbjct: 155 YKLTDFGAARELEDDEQFVXLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFY 214
Query: 236 ILLSGYPPFIAQSNRQKQQMIM 257
              +G  PF      ++ + +M
Sbjct: 215 HAATGSLPFRPFEGPRRNKEVM 236

>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human Tbk1 Kinase- Uld Domain Length = 396

Iteration: 1
 Score = 68.6 bits (166), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 106/247 (42%), Gaps = 52/247 (21%)
Query: 14  VTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFFPT 73
           ++DILG+G  + V RG  K  G+    AIK    I    P                    
Sbjct: 13  LSDILGQGATANVFRGRHKKTGDL--FAIKVFNNISFLRP-------------------- 50
Query: 74  RKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVH--LILELCSGGELFD 131
              V V       E  V++K+      H N++ L+ + E+    H  LI+E C  G L+ 
Sbjct: 51  ---VDVQ----MREFEVLKKL-----NHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLY- 97
Query: 132 RIVAQERYMEVGAAA-----VIRQIAEGLAALHQANIVHRDLKPENCL-FLNDREDSPLK 185
             V +E     G        V+R +  G+  L +  IVHR++KP N +  + +   S  K
Sbjct: 98  -TVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYK 156
Query: 186 IMDFGLSSVEGYTDPVVGLFGSIDYVSPE----ALL----QDRITSKSDMWSLGVILYIL 237
           + DFG +      +  V L+G+ +Y+ P+    A+L    Q +  +  D+WS+GV  Y  
Sbjct: 157 LTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHA 216
Query: 238 LSGYPPF 244
            +G  PF
Sbjct: 217 ATGSLPF 223

>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333

Iteration: 1
 Score = 68.6 bits (166), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 103/225 (45%), Gaps = 29/225 (12%)
Query: 93  KIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVI---- 148
           KI+ ++  H N+++L         V +I E C  G+L + +  + R +E   A  I    
Sbjct: 101 KIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANST 160
Query: 149 ----------RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYT 198
                      Q+A+G+A L   N +HRD+   N L  N       KI DFGL+  +   
Sbjct: 161 ASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHV---AKIGDFGLAR-DIMN 216
Query: 199 DPVVGLFGS----IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQ 253
           D    + G+    + +++PE++     T +SD+WS G++L+ + S G  P+       K 
Sbjct: 217 DSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKF 276
Query: 254 QMIMAGEFSFYEQTW--KNISSSAKQLISSLLTVDPNRRPSAQEL 296
             ++   +   +  +  KNI S    ++ +   ++P  RP+ Q++
Sbjct: 277 YKLVKDGYQMAQPAFAPKNIYS----IMQACWALEPTHRPTFQQI 317

>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1 (Kchip-1) Length = 224

Iteration: 1
 Score = 68.6 bits (166), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 318 SRLQSFNARRKLRAAAIASVLSSTIFLRRTKKLKNLLGSHDLNEEEIQNLRIHFRTICAN 377
           S LQ+   +R+     I   L  T+   R + L+ L    +  + E+Q L   F+  C +
Sbjct: 9   SSLQT--KQRRPSKDKIEDELEMTMVCHRPEGLEQLEAQTNFTKRELQVLYRGFKNECPS 66
Query: 378 G--DNATLSE-FEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQG 434
           G  +  T  + + +     + S+    A  +F+ FD  + G+V   + +   S L +   
Sbjct: 67  GVVNEETFKQIYAQFFPHGDASTY---AHYLFNAFDTTQTGSVKFEDFVTALSILLRGTV 123
Query: 435 DDALRLCFQMYDIDRSGCITKEEVASMLRALPD----DCLPV--DITEPGKLDEIFDLMD 488
            + LR  F +YDI++ G I KEE+  +++A+ D       PV  + T    +D  F  MD
Sbjct: 124 HEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMD 183
Query: 489 ANNDGKVTFDEFRAAMQ 505
            N DG VT DEF  + Q
Sbjct: 184 KNKDGIVTLDEFLESCQ 200

>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298

Iteration: 1
 Score = 68.6 bits (166), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 128/302 (42%), Gaps = 74/302 (24%)
Query: 17  ILGRGGFSVVRRGIKKTCGETN-QVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFFPTRK 75
           ++G+G F VV  G      +   Q AIK+L RI                          +
Sbjct: 28  VIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEM-----------------------Q 64
Query: 76  QVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGV-HLILELCSGGELFDRIV 134
           QV   +A L  E L+MR +      HPNV+ L  +     G+ H++L     G+L   I 
Sbjct: 65  QV---EAFL-REGLLMRGL-----NHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIR 115
Query: 135 AQERYMEVG-AAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS- 192
           + +R   V    +   Q+A G+  L +   VHRDL   NC+     E   +K+ DFGL+ 
Sbjct: 116 SPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCML---DESFTVKVADFGLAR 172
Query: 193 --------SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPP 243
                   SV+ +    +     + + + E+L   R T+KSD+WS GV+L+ LL+ G PP
Sbjct: 173 DILDREYYSVQQHRHARL----PVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPP 228
Query: 244 -----------FIAQSNRQKQ-QMIMAGEFSFYEQTW----------KNISSSAKQLISS 281
                      F+AQ  R  Q +      +   +Q W          + +    +Q++S+
Sbjct: 229 YRHIDPFDLTHFLAQGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSA 288
Query: 282 LL 283
           LL
Sbjct: 289 LL 290

>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 635

Iteration: 1
 Score = 68.6 bits (166), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 93/188 (49%), Gaps = 12/188 (6%)
Query: 79  VSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQER 138
            +D  L +E+L    +++ +  +P ++ +  + E ++ + L++E+   G L ++ + Q R
Sbjct: 408 ANDPALKDELLAEANVMQQLD-NPYIVRMIGICEAESWM-LVMEMAELGPL-NKYLQQNR 464
Query: 139 YM-EVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV--- 194
           ++ +     ++ Q++ G+  L ++N VHRDL   N L +        KI DFGLS     
Sbjct: 465 HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHY---AKISDFGLSKALRA 521
Query: 195 -EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQK 252
            E Y          + + +PE +   + +SKSD+WS GV+++   S G  P+      + 
Sbjct: 522 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 581
Query: 253 QQMIMAGE 260
             M+  GE
Sbjct: 582 TAMLEKGE 589

>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 636

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 93/188 (49%), Gaps = 12/188 (6%)
Query: 79  VSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQER 138
            +D  L +E+L    +++ +  +P ++ +  + E ++ + L++E+   G L ++ + Q R
Sbjct: 409 ANDPALKDELLAEANVMQQLD-NPYIVRMIGICEAESWM-LVMEMAELGPL-NKYLQQNR 465
Query: 139 YM-EVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV--- 194
           ++ +     ++ Q++ G+  L ++N VHRDL   N L +        KI DFGLS     
Sbjct: 466 HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHY---AKISDFGLSKALRA 522
Query: 195 -EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQK 252
            E Y          + + +PE +   + +SKSD+WS GV+++   S G  P+      + 
Sbjct: 523 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 582
Query: 253 QQMIMAGE 260
             M+  GE
Sbjct: 583 TAMLEKGE 590

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 108/219 (49%), Gaps = 18/219 (8%)
Query: 87  EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELF---DRIVAQERYMEVG 143
           E+ +M+++      HPN++           + ++ E  S G L+    +  A+E+  E  
Sbjct: 84  EVAIMKRLR-----HPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERR 138
Query: 144 AAAVIRQIAEGLAALHQAN--IVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD-P 200
             ++   +A+G+  LH  N  IVHR+LK  N L   D++ + +K+ DFGLS ++  T   
Sbjct: 139 RLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLV--DKKYT-VKVCDFGLSRLKASTFLS 195
Query: 201 VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGE 260
                G+ ++++PE L  +    KSD++S GVIL+ L +   P+    N    Q++ A  
Sbjct: 196 SKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPW---GNLNPAQVVAAVG 252
Query: 261 FSFYE-QTWKNISSSAKQLISSLLTVDPNRRPSAQELLN 298
           F     +  +N++     +I    T +P +RPS   +++
Sbjct: 253 FKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMD 291

>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/274 (26%), Positives = 114/274 (41%), Gaps = 71/274 (25%)
Query: 6   RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXX 65
           R LTD +E    LGRGGF VV     K   +    AIK +R                   
Sbjct: 2   RYLTD-FEPIQCLGRGGFGVVFEAKNKV--DDCNYAIKRIR------------------- 39
Query: 66  XQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNG--------- 116
                 P R+   ++   +  E+  + K+      HP ++  ++ + ++N          
Sbjct: 40  -----LPNRE---LAREKVMREVKALAKL-----EHPGIVRYFNAWLEKNTTEKLQPSSP 86
Query: 117 ---VHLILELCSGGELFD----RIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLK 169
              +++ ++LC    L D    R   +ER   V    +  QIAE +  LH   ++HRDLK
Sbjct: 87  KVYLYIQMQLCRKENLKDWMNGRCTIEERERSV-CLHIFLQIAEAVEFLHSKGLMHRDLK 145
Query: 170 PENCLFLNDREDSPLKIMDFGLSSV-------EGYTDPV------VGLFGSIDYVSPEAL 216
           P N  F     D  +K+ DFGL +        +    P+       G  G+  Y+SPE +
Sbjct: 146 PSNIFFTM---DDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQI 202
Query: 217 LQDRITSKSDMWSLGVILYILLSGYPPFIAQSNR 250
             +  + K D++SLG+IL+ LL    PF  Q  R
Sbjct: 203 HGNSYSHKVDIFSLGLILFELLY---PFSTQMER 233

>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 18/205 (8%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGEL--FDRIVAQERYMEVGAAA------VIRQIA 152
           H N++    V        ++LEL +GG+L  F R   + R  +  + A      V R IA
Sbjct: 93  HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIA 151
Query: 153 EGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS----VEGYTDPVVGLFGSI 208
            G   L + + +HRD+   NCL          KI DFG++        Y      +   +
Sbjct: 152 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAML-PV 210
Query: 209 DYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQT 267
            ++ PEA ++   TSK+D WS GV+L+ + S GY P+ ++SN++  + + +G        
Sbjct: 211 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG---RMDP 267
Query: 268 WKNISSSAKQLISSLLTVDPNRRPS 292
            KN      ++++      P  RP+
Sbjct: 268 PKNCPGPVYRIMTQCWQHQPEDRPN 292

>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 120/283 (42%), Gaps = 51/283 (18%)
Query: 1   MGQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQ-VAIKTLRRIGSTTPYGFPXX 59
           M  + +     YE  D LG G F+ V +   K    TNQ VAIK ++             
Sbjct: 1   MALDVKSRAKRYEKLDFLGEGQFATVYKARDKN---TNQIVAIKKIK------------- 44
Query: 60  XXXXXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHL 119
                   +G     K      AL   EI    K+++ +S HPN+I L D +  ++ + L
Sbjct: 45  --------LGHRSEAKDGINRTAL--REI----KLLQELS-HPNIIGLLDAFGHKSNISL 89
Query: 120 ILELCSGGELFDRIVAQERYMEVGAA---AVIRQIAEGLAALHQANIVHRDLKPENCLFL 176
           + +     E    ++ ++  + +  +   A +    +GL  LHQ  I+HRDLKP N L  
Sbjct: 90  VFDFM---ETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLL- 145
Query: 177 NDREDSPLKIMDFGLSSVEG-----YTDPVVGLFGSIDYVSPEALLQDRITSKS-DMWSL 230
              E+  LK+ DFGL+   G     Y   VV  +    Y +PE L   R+     DMW++
Sbjct: 146 --DENGVLKLADFGLAKSFGSPNRAYXHQVVTRW----YRAPELLFGARMYGVGVDMWAV 199
Query: 231 GVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
           G IL  LL   P     S+  +   I     +  E+ W ++ S
Sbjct: 200 GCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCS 242

>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 18/205 (8%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGEL--FDRIVAQERYMEVGAAA------VIRQIA 152
           H N++    V        ++LEL +GG+L  F R   + R  +  + A      V R IA
Sbjct: 92  HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIA 150
Query: 153 EGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS----VEGYTDPVVGLFGSI 208
            G   L + + +HRD+   NCL          KI DFG++        Y      +   +
Sbjct: 151 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML-PV 209
Query: 209 DYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQT 267
            ++ PEA ++   TSK+D WS GV+L+ + S GY P+ ++SN++  + + +G        
Sbjct: 210 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG---RMDP 266
Query: 268 WKNISSSAKQLISSLLTVDPNRRPS 292
            KN      ++++      P  RP+
Sbjct: 267 PKNCPGPVYRIMTQCWQHQPEDRPN 291

>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 18/205 (8%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGEL--FDRIVAQERYMEVGAAA------VIRQIA 152
           H N++    V        ++LEL +GG+L  F R   + R  +  + A      V R IA
Sbjct: 84  HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIA 142
Query: 153 EGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS----VEGYTDPVVGLFGSI 208
            G   L + + +HRD+   NCL          KI DFG++        Y      +   +
Sbjct: 143 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML-PV 201
Query: 209 DYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQT 267
            ++ PEA ++   TSK+D WS GV+L+ + S GY P+ ++SN++  + + +G        
Sbjct: 202 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG---RMDP 258
Query: 268 WKNISSSAKQLISSLLTVDPNRRPS 292
            KN      ++++      P  RP+
Sbjct: 259 PKNCPGPVYRIMTQCWQHQPEDRPN 283

>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 18/205 (8%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGEL--FDRIVAQERYMEVGAAA------VIRQIA 152
           H N++    V        ++LEL +GG+L  F R   + R  +  + A      V R IA
Sbjct: 109 HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIA 167
Query: 153 EGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS----VEGYTDPVVGLFGSI 208
            G   L + + +HRD+   NCL          KI DFG++        Y      +   +
Sbjct: 168 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML-PV 226
Query: 209 DYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQT 267
            ++ PEA ++   TSK+D WS GV+L+ + S GY P+ ++SN++  + + +G        
Sbjct: 227 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG---RMDP 283
Query: 268 WKNISSSAKQLISSLLTVDPNRRPS 292
            KN      ++++      P  RP+
Sbjct: 284 PKNCPGPVYRIMTQCWQHQPEDRPN 308

>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 18/205 (8%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGEL--FDRIVAQERYMEVGAAA------VIRQIA 152
           H N++    V        ++LEL +GG+L  F R   + R  +  + A      V R IA
Sbjct: 93  HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIA 151
Query: 153 EGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS----VEGYTDPVVGLFGSI 208
            G   L + + +HRD+   NCL          KI DFG++        Y      +   +
Sbjct: 152 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML-PV 210
Query: 209 DYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQT 267
            ++ PEA ++   TSK+D WS GV+L+ + S GY P+ ++SN++  + + +G        
Sbjct: 211 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG---RMDP 267
Query: 268 WKNISSSAKQLISSLLTVDPNRRPS 292
            KN      ++++      P  RP+
Sbjct: 268 PKNCPGPVYRIMTQCWQHQPEDRPN 292

>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 18/205 (8%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGEL--FDRIVAQERYMEVGAAA------VIRQIA 152
           H N++    V        ++LEL +GG+L  F R   + R  +  + A      V R IA
Sbjct: 107 HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIA 165
Query: 153 EGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS----VEGYTDPVVGLFGSI 208
            G   L + + +HRD+   NCL          KI DFG++        Y      +   +
Sbjct: 166 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML-PV 224
Query: 209 DYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQT 267
            ++ PEA ++   TSK+D WS GV+L+ + S GY P+ ++SN++  + + +G        
Sbjct: 225 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG---RMDP 281
Query: 268 WKNISSSAKQLISSLLTVDPNRRPS 292
            KN      ++++      P  RP+
Sbjct: 282 PKNCPGPVYRIMTQCWQHQPEDRPN 306

>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 18/205 (8%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGEL--FDRIVAQERYMEVGAAA------VIRQIA 152
           H N++    V        ++LEL +GG+L  F R   + R  +  + A      V R IA
Sbjct: 99  HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIA 157
Query: 153 EGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS----VEGYTDPVVGLFGSI 208
            G   L + + +HRD+   NCL          KI DFG++        Y      +   +
Sbjct: 158 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML-PV 216
Query: 209 DYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQT 267
            ++ PEA ++   TSK+D WS GV+L+ + S GY P+ ++SN++  + + +G        
Sbjct: 217 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG---RMDP 273
Query: 268 WKNISSSAKQLISSLLTVDPNRRPS 292
            KN      ++++      P  RP+
Sbjct: 274 PKNCPGPVYRIMTQCWQHQPEDRPN 298

>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 18/205 (8%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGEL--FDRIVAQERYMEVGAAA------VIRQIA 152
           H N++    V        ++LEL +GG+L  F R   + R  +  + A      V R IA
Sbjct: 93  HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIA 151
Query: 153 EGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS----VEGYTDPVVGLFGSI 208
            G   L + + +HRD+   NCL          KI DFG++        Y      +   +
Sbjct: 152 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML-PV 210
Query: 209 DYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQT 267
            ++ PEA ++   TSK+D WS GV+L+ + S GY P+ ++SN++  + + +G        
Sbjct: 211 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG---RMDP 267
Query: 268 WKNISSSAKQLISSLLTVDPNRRPS 292
            KN      ++++      P  RP+
Sbjct: 268 PKNCPGPVYRIMTQCWQHQPEDRPN 292

>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7- Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2- Phenylcyclopropyl)urea Length = 293

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 93/188 (49%), Gaps = 12/188 (6%)
Query: 79  VSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQER 138
            +D  L +E+L    +++ +  +P ++ +  + E ++ + L++E+   G L ++ + Q R
Sbjct: 66  ANDPALKDELLAEANVMQQLD-NPYIVRMIGICEAESWM-LVMEMAELGPL-NKYLQQNR 122
Query: 139 YM-EVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV--- 194
           ++ +     ++ Q++ G+  L ++N VHRDL   N L +        KI DFGLS     
Sbjct: 123 HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHY---AKISDFGLSKALRA 179
Query: 195 -EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQK 252
            E Y          + + +PE +   + +SKSD+WS GV+++   S G  P+      + 
Sbjct: 180 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 239
Query: 253 QQMIMAGE 260
             M+  GE
Sbjct: 240 TAMLEKGE 247

>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic Domain With Pyrazolylbenzimidazole Inhibitor 416 Length = 299

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 93/188 (49%), Gaps = 12/188 (6%)
Query: 79  VSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQER 138
            +D  L +E+L    +++ +  +P ++ +  + E ++ + L++E+   G L ++ + Q R
Sbjct: 66  ANDPALKDELLAEANVMQQLD-NPYIVRMIGICEAESWM-LVMEMAELGPL-NKYLQQNR 122
Query: 139 YM-EVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV--- 194
           ++ +     ++ Q++ G+  L ++N VHRDL   N L +        KI DFGLS     
Sbjct: 123 HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHY---AKISDFGLSKALRA 179
Query: 195 -EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQK 252
            E Y          + + +PE +   + +SKSD+WS GV+++   S G  P+      + 
Sbjct: 180 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 239
Query: 253 QQMIMAGE 260
             M+  GE
Sbjct: 240 TAMLEKGE 247

>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 18/205 (8%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGEL--FDRIVAQERYMEVGAAA------VIRQIA 152
           H N++    V        ++LEL +GG+L  F R   + R  +  + A      V R IA
Sbjct: 107 HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIA 165
Query: 153 EGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS----VEGYTDPVVGLFGSI 208
            G   L + + +HRD+   NCL          KI DFG++        Y      +   +
Sbjct: 166 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML-PV 224
Query: 209 DYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQT 267
            ++ PEA ++   TSK+D WS GV+L+ + S GY P+ ++SN++  + + +G        
Sbjct: 225 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG---RMDP 281
Query: 268 WKNISSSAKQLISSLLTVDPNRRPS 292
            KN      ++++      P  RP+
Sbjct: 282 PKNCPGPVYRIMTQCWQHQPEDRPN 306

>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylaminopyrimidines As Potent Inhibitors Of Spleen Tyrosine Kinase (Syk) Length = 291

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 93/188 (49%), Gaps = 12/188 (6%)
Query: 79  VSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQER 138
            +D  L +E+L    +++ +  +P ++ +  + E ++ + L++E+   G L ++ + Q R
Sbjct: 64  ANDPALKDELLAEANVMQQLD-NPYIVRMIGICEAESWM-LVMEMAELGPL-NKYLQQNR 120
Query: 139 YM-EVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV--- 194
           ++ +     ++ Q++ G+  L ++N VHRDL   N L +        KI DFGLS     
Sbjct: 121 HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHY---AKISDFGLSKALRA 177
Query: 195 -EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQK 252
            E Y          + + +PE +   + +SKSD+WS GV+++   S G  P+      + 
Sbjct: 178 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 237
Query: 253 QQMIMAGE 260
             M+  GE
Sbjct: 238 TAMLEKGE 245

>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 81/316 (25%), Positives = 133/316 (42%), Gaps = 64/316 (20%)
Query: 8   LTDEYEV-------TDILGRGGFSVVRRGIKKTCGE---TNQVAIKTLRRIGSTTPYGFP 57
           + DE+EV       +  LG+G F +V  G+ K   +     +VAIKT+    S       
Sbjct: 3   VPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM------ 56
Query: 58  XXXXXXXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGV 117
                           R+++        NE  VM++     + H +V+ L  V       
Sbjct: 57  ----------------RERIE-----FLNEASVMKEF----NCH-HVVRLLGVVSQGQPT 90
Query: 118 HLILELCSGGELFDRIVAQERYMEVGAA----------AVIRQIAEGLAALHQANIVHRD 167
            +I+EL + G+L   + +    ME               +  +IA+G+A L+    VHRD
Sbjct: 91  LVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRD 150
Query: 168 LKPENCLFLNDREDSPLKIMDFGLS----SVEGYTDPVVGLFGSIDYVSPEALLQDRITS 223
           L   NC+     ED  +KI DFG++      + Y     GL   + ++SPE+L     T+
Sbjct: 151 LAARNCMVA---EDFTVKIGDFGMTRDIYETDYYRKGGKGLL-PVRWMSPESLKDGVFTT 206
Query: 224 KSDMWSLGVILY-ILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSL 282
            SD+WS GV+L+ I      P+   SN Q  + +M G     ++   N      +L+   
Sbjct: 207 YSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG--GLLDKP-DNCPDMLFELMRMC 263
Query: 283 LTVDPNRRPSAQELLN 298
              +P  RPS  E+++
Sbjct: 264 WQYNPKMRPSFLEIIS 279

>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 81/316 (25%), Positives = 133/316 (42%), Gaps = 64/316 (20%)
Query: 8   LTDEYEV-------TDILGRGGFSVVRRGIKKTCGE---TNQVAIKTLRRIGSTTPYGFP 57
           + DE+EV       +  LG+G F +V  G+ K   +     +VAIKT+    S       
Sbjct: 7   VPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM------ 60
Query: 58  XXXXXXXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGV 117
                           R+++        NE  VM++     + H +V+ L  V       
Sbjct: 61  ----------------RERIE-----FLNEASVMKEF----NCH-HVVRLLGVVSQGQPT 94
Query: 118 HLILELCSGGELFDRIVAQERYMEVGAA----------AVIRQIAEGLAALHQANIVHRD 167
            +I+EL + G+L   + +    ME               +  +IA+G+A L+    VHRD
Sbjct: 95  LVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRD 154
Query: 168 LKPENCLFLNDREDSPLKIMDFGLS----SVEGYTDPVVGLFGSIDYVSPEALLQDRITS 223
           L   NC+     ED  +KI DFG++      + Y     GL   + ++SPE+L     T+
Sbjct: 155 LAARNCMVA---EDFTVKIGDFGMTRDIYETDYYRKGGKGLL-PVRWMSPESLKDGVFTT 210
Query: 224 KSDMWSLGVILY-ILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSL 282
            SD+WS GV+L+ I      P+   SN Q  + +M G     ++   N      +L+   
Sbjct: 211 YSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG--GLLDKP-DNCPDMLFELMRMC 267
Query: 283 LTVDPNRRPSAQELLN 298
              +P  RPS  E+++
Sbjct: 268 WQYNPKMRPSFLEIIS 283

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 79/149 (53%), Gaps = 11/149 (7%)
Query: 101 HPNVIDLYDV-YEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIR---QIAEGLA 156
           H N++ L  V  E++ G++++ E  + G L D + ++ R + +G   +++    + E + 
Sbjct: 64  HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAME 122
Query: 157 ALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEAL 216
            L   N VHRDL   N L     ED+  K+ DFGL+     T     L   + + +PEAL
Sbjct: 123 YLEGNNFVHRDLAARNVLV---SEDNVAKVSDFGLTKEASSTQDTGKL--PVKWTAPEAL 177
Query: 217 LQDRITSKSDMWSLGVILYILLS-GYPPF 244
            +   ++KSD+WS G++L+ + S G  P+
Sbjct: 178 REAAFSTKSDVWSFGILLWEIYSFGRVPY 206

>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 18/205 (8%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGEL--FDRIVAQERYMEVGAAA------VIRQIA 152
           H N++    V        ++LEL +GG+L  F R   + R  +  + A      V R IA
Sbjct: 119 HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIA 177
Query: 153 EGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS----VEGYTDPVVGLFGSI 208
            G   L + + +HRD+   NCL          KI DFG++        Y      +   +
Sbjct: 178 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML-PV 236
Query: 209 DYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQT 267
            ++ PEA ++   TSK+D WS GV+L+ + S GY P+ ++SN++  + + +G        
Sbjct: 237 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG---RMDP 293
Query: 268 WKNISSSAKQLISSLLTVDPNRRPS 292
            KN      ++++      P  RP+
Sbjct: 294 PKNCPGPVYRIMTQCWQHQPEDRPN 318

>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836 Length = 273

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 93/188 (49%), Gaps = 12/188 (6%)
Query: 79  VSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQER 138
            +D  L +E+L    +++ +  +P ++ +  + E ++ + L++E+   G L ++ + Q R
Sbjct: 44  ANDPALKDELLAEANVMQQLD-NPYIVRMIGICEAESWM-LVMEMAELGPL-NKYLQQNR 100
Query: 139 YM-EVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV--- 194
           ++ +     ++ Q++ G+  L ++N VHRDL   N L +        KI DFGLS     
Sbjct: 101 HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHY---AKISDFGLSKALRA 157
Query: 195 -EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQK 252
            E Y          + + +PE +   + +SKSD+WS GV+++   S G  P+      + 
Sbjct: 158 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 217
Query: 253 QQMIMAGE 260
             M+  GE
Sbjct: 218 TAMLEKGE 225

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/242 (25%), Positives = 99/242 (40%), Gaps = 40/242 (16%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ 160
           H N+++L +V + +   +L+ E      L D  +             + QI  G+   H 
Sbjct: 83  HENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHS 142
Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV-----EGYTDPVVGLFGSIDYVSPEA 215
            NI+HRD+KPEN L     +   +K+ DFG +       E Y D V   +    Y +PE 
Sbjct: 143 HNIIHRDIKPENILV---SQSGVVKLCDFGFARTLAAPGEVYDDEVATRW----YRAPEL 195
Query: 216 LLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIM----------------- 257
           L+ D    K+ D+W++G ++  +  G P F   S+  +   IM                 
Sbjct: 196 LVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKN 255
Query: 258 ---AG-------EFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSA 307
              AG       E    E+ +  +S     L    L +DP++RP   ELL+H +   D  
Sbjct: 256 PVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMDGF 315
Query: 308 KE 309
            E
Sbjct: 316 AE 317

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 108/225 (48%), Gaps = 30/225 (13%)
Query: 87  EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELF---DRIVAQERYMEVG 143
           E+ +M+++      HPN++           + ++ E  S G L+    +  A+E+  E  
Sbjct: 84  EVAIMKRLR-----HPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERR 138
Query: 144 AAAVIRQIAEGLAALHQAN--IVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPV 201
             ++   +A+G+  LH  N  IVHRDLK  N L   D++ + +K+ DFGLS ++      
Sbjct: 139 RLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLV--DKKYT-VKVCDFGLSRLKA----- 190
Query: 202 VGLF-------GSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQ 254
              F       G+ ++++PE L  +    KSD++S GVIL+ L +   P+    N    Q
Sbjct: 191 -SXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPW---GNLNPAQ 246
Query: 255 MIMAGEFSFYE-QTWKNISSSAKQLISSLLTVDPNRRPSAQELLN 298
           ++ A  F     +  +N++     +I    T +P +RPS   +++
Sbjct: 247 VVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMD 291

>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 93/188 (49%), Gaps = 12/188 (6%)
Query: 79  VSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQER 138
            +D  L +E+L    +++ +  +P ++ +  + E ++ + L++E+   G L ++ + Q R
Sbjct: 50  ANDPALKDELLAEANVMQQLD-NPYIVRMIGICEAESWM-LVMEMAELGPL-NKYLQQNR 106
Query: 139 YM-EVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV--- 194
           ++ +     ++ Q++ G+  L ++N VHRDL   N L +        KI DFGLS     
Sbjct: 107 HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHY---AKISDFGLSKALRA 163
Query: 195 -EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQK 252
            E Y          + + +PE +   + +SKSD+WS GV+++   S G  P+      + 
Sbjct: 164 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 223
Query: 253 QQMIMAGE 260
             M+  GE
Sbjct: 224 TAMLEKGE 231

>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 81/316 (25%), Positives = 131/316 (41%), Gaps = 64/316 (20%)
Query: 8   LTDEYEV-------TDILGRGGFSVVRRGIKKTCGE---TNQVAIKTLRRIGSTTPYGFP 57
           + DE+EV       +  LG+G F +V  G+ K   +     +VAIKT+    S       
Sbjct: 9   VPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM------ 62
Query: 58  XXXXXXXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGV 117
                           R+++        NE  VM++     + H +V+ L  V       
Sbjct: 63  ----------------RERIE-----FLNEASVMKEF----NCH-HVVRLLGVVSQGQPT 96
Query: 118 HLILELCSGGELFDRIVAQERYMEVGAA----------AVIRQIAEGLAALHQANIVHRD 167
            +I+EL + G+L   + +    ME               +  +IA+G+A L+    VHRD
Sbjct: 97  LVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRD 156
Query: 168 LKPENCLFLNDREDSPLKIMDFGLS----SVEGYTDPVVGLFGSIDYVSPEALLQDRITS 223
           L   NC+     ED  +KI DFG++      + Y     GL   + ++SPE+L     T+
Sbjct: 157 LAARNCMVA---EDFTVKIGDFGMTRDIYETDYYRKGGKGLL-PVRWMSPESLKDGVFTT 212
Query: 224 KSDMWSLGVILY-ILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSL 282
            SD+WS GV+L+ I      P+   SN Q  + +M G          N      +L+   
Sbjct: 213 YSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLL---DKPDNCPDMLFELMRMC 269
Query: 283 LTVDPNRRPSAQELLN 298
              +P  RPS  E+++
Sbjct: 270 WQYNPKMRPSFLEIIS 285

>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 81/316 (25%), Positives = 133/316 (42%), Gaps = 64/316 (20%)
Query: 8   LTDEYEV-------TDILGRGGFSVVRRGIKKTCGE---TNQVAIKTLRRIGSTTPYGFP 57
           + DE+EV       +  LG+G F +V  G+ K   +     +VAIKT+    S       
Sbjct: 9   VPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM------ 62
Query: 58  XXXXXXXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGV 117
                           R+++        NE  VM++     + H +V+ L  V       
Sbjct: 63  ----------------RERIE-----FLNEASVMKEF----NCH-HVVRLLGVVSQGQPT 96
Query: 118 HLILELCSGGELFDRIVAQERYMEVGAA----------AVIRQIAEGLAALHQANIVHRD 167
            +I+EL + G+L   + +    ME               +  +IA+G+A L+    VHRD
Sbjct: 97  LVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRD 156
Query: 168 LKPENCLFLNDREDSPLKIMDFGLS----SVEGYTDPVVGLFGSIDYVSPEALLQDRITS 223
           L   NC+     ED  +KI DFG++      + Y     GL   + ++SPE+L     T+
Sbjct: 157 LAARNCMVA---EDFTVKIGDFGMTRDIYETDYYRKGGKGLL-PVRWMSPESLKDGVFTT 212
Query: 224 KSDMWSLGVILY-ILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSL 282
            SD+WS GV+L+ I      P+   SN Q  + +M G     ++   N      +L+   
Sbjct: 213 YSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG--GLLDKP-DNCPDMLFELMRMC 269
Query: 283 LTVDPNRRPSAQELLN 298
              +P  RPS  E+++
Sbjct: 270 WQYNPKMRPSFLEIIS 285

>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 81/316 (25%), Positives = 133/316 (42%), Gaps = 64/316 (20%)
Query: 8   LTDEYEV-------TDILGRGGFSVVRRGIKKTCGE---TNQVAIKTLRRIGSTTPYGFP 57
           + DE+EV       +  LG+G F +V  G+ K   +     +VAIKT+    S       
Sbjct: 10  VPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM------ 63
Query: 58  XXXXXXXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGV 117
                           R+++        NE  VM++     + H +V+ L  V       
Sbjct: 64  ----------------RERIE-----FLNEASVMKEF----NCH-HVVRLLGVVSQGQPT 97
Query: 118 HLILELCSGGELFDRIVAQERYMEVGAA----------AVIRQIAEGLAALHQANIVHRD 167
            +I+EL + G+L   + +    ME               +  +IA+G+A L+    VHRD
Sbjct: 98  LVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRD 157
Query: 168 LKPENCLFLNDREDSPLKIMDFGLS----SVEGYTDPVVGLFGSIDYVSPEALLQDRITS 223
           L   NC+     ED  +KI DFG++      + Y     GL   + ++SPE+L     T+
Sbjct: 158 LAARNCMVA---EDFTVKIGDFGMTRDIYETDYYRKGGKGLL-PVRWMSPESLKDGVFTT 213
Query: 224 KSDMWSLGVILY-ILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSL 282
            SD+WS GV+L+ I      P+   SN Q  + +M G     ++   N      +L+   
Sbjct: 214 YSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG--GLLDKP-DNCPDMLFELMRMC 270
Query: 283 LTVDPNRRPSAQELLN 298
              +P  RPS  E+++
Sbjct: 271 WQYNPKMRPSFLEIIS 286

>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 81/316 (25%), Positives = 131/316 (41%), Gaps = 64/316 (20%)
Query: 8   LTDEYEV-------TDILGRGGFSVVRRGIKKTCGE---TNQVAIKTLRRIGSTTPYGFP 57
           + DE+EV       +  LG+G F +V  G+ K   +     +VAIKT+    S       
Sbjct: 16  VPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM------ 69
Query: 58  XXXXXXXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGV 117
                           R+++        NE  VM++     + H +V+ L  V       
Sbjct: 70  ----------------RERIE-----FLNEASVMKEF----NCH-HVVRLLGVVSQGQPT 103
Query: 118 HLILELCSGGELFDRIVAQERYMEVGAA----------AVIRQIAEGLAALHQANIVHRD 167
            +I+EL + G+L   + +    ME               +  +IA+G+A L+    VHRD
Sbjct: 104 LVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRD 163
Query: 168 LKPENCLFLNDREDSPLKIMDFGLS----SVEGYTDPVVGLFGSIDYVSPEALLQDRITS 223
           L   NC+     ED  +KI DFG++      + Y     GL   + ++SPE+L     T+
Sbjct: 164 LAARNCMVA---EDFTVKIGDFGMTRDIYETDYYRKGGKGLL-PVRWMSPESLKDGVFTT 219
Query: 224 KSDMWSLGVILY-ILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSL 282
            SD+WS GV+L+ I      P+   SN Q  + +M G          N      +L+   
Sbjct: 220 YSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLL---DKPDNCPDMLFELMRMC 276
Query: 283 LTVDPNRRPSAQELLN 298
              +P  RPS  E+++
Sbjct: 277 WQYNPKMRPSFLEIIS 292

>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A Sulfonamidopyrazine Piperidine Inhibitor Length = 274

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 93/188 (49%), Gaps = 12/188 (6%)
Query: 79  VSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQER 138
            +D  L +E+L    +++ +  +P ++ +  + E ++ + L++E+   G L ++ + Q R
Sbjct: 46  ANDPALKDELLAEANVMQQLD-NPYIVRMIGICEAESWM-LVMEMAELGPL-NKYLQQNR 102
Query: 139 YM-EVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV--- 194
           ++ +     ++ Q++ G+  L ++N VHRDL   N L +        KI DFGLS     
Sbjct: 103 HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHY---AKISDFGLSKALRA 159
Query: 195 -EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQK 252
            E Y          + + +PE +   + +SKSD+WS GV+++   S G  P+      + 
Sbjct: 160 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 219
Query: 253 QQMIMAGE 260
             M+  GE
Sbjct: 220 TAMLEKGE 227

>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 18/205 (8%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGEL--FDRIVAQERYMEVGAAA------VIRQIA 152
           H N++    V        +++EL +GG+L  F R   + R  +  + A      V R IA
Sbjct: 92  HQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIA 150
Query: 153 EGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS----VEGYTDPVVGLFGSI 208
            G   L + + +HRD+   NCL          KI DFG++        Y      +   +
Sbjct: 151 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML-PV 209
Query: 209 DYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQT 267
            ++ PEA ++   TSK+D WS GV+L+ + S GY P+ ++SN++  + + +G        
Sbjct: 210 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG---RMDP 266
Query: 268 WKNISSSAKQLISSLLTVDPNRRPS 292
            KN      ++++      P  RP+
Sbjct: 267 PKNCPGPVYRIMTQCWQHQPEDRPN 291

>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain Length = 291

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 93/188 (49%), Gaps = 12/188 (6%)
Query: 79  VSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQER 138
            +D  L +E+L    +++ +  +P ++ +  + E ++ + L++E+   G L ++ + Q R
Sbjct: 56  ANDPALKDELLAEANVMQQLD-NPYIVRMIGICEAESWM-LVMEMAELGPL-NKYLQQNR 112
Query: 139 YM-EVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV--- 194
           ++ +     ++ Q++ G+  L ++N VHRDL   N L +        KI DFGLS     
Sbjct: 113 HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHY---AKISDFGLSKALRA 169
Query: 195 -EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQK 252
            E Y          + + +PE +   + +SKSD+WS GV+++   S G  P+      + 
Sbjct: 170 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 229
Query: 253 QQMIMAGE 260
             M+  GE
Sbjct: 230 TAMLEKGE 237

>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 81/316 (25%), Positives = 131/316 (41%), Gaps = 64/316 (20%)
Query: 8   LTDEYEV-------TDILGRGGFSVVRRGIKKTCGE---TNQVAIKTLRRIGSTTPYGFP 57
           + DE+EV       +  LG+G F +V  G+ K   +     +VAIKT+    S       
Sbjct: 38  VPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM------ 91
Query: 58  XXXXXXXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGV 117
                           R+++        NE  VM++     + H +V+ L  V       
Sbjct: 92  ----------------RERIE-----FLNEASVMKEF----NCH-HVVRLLGVVSQGQPT 125
Query: 118 HLILELCSGGELFDRIVAQERYMEVGAA----------AVIRQIAEGLAALHQANIVHRD 167
            +I+EL + G+L   + +    ME               +  +IA+G+A L+    VHRD
Sbjct: 126 LVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRD 185
Query: 168 LKPENCLFLNDREDSPLKIMDFGLS----SVEGYTDPVVGLFGSIDYVSPEALLQDRITS 223
           L   NC+     ED  +KI DFG++      + Y     GL   + ++SPE+L     T+
Sbjct: 186 LAARNCMVA---EDFTVKIGDFGMTRDIYETDYYRKGGKGLL-PVRWMSPESLKDGVFTT 241
Query: 224 KSDMWSLGVILY-ILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSL 282
            SD+WS GV+L+ I      P+   SN Q  + +M G          N      +L+   
Sbjct: 242 YSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLL---DKPDNCPDMLFELMRMC 298
Query: 283 LTVDPNRRPSAQELLN 298
              +P  RPS  E+++
Sbjct: 299 WQYNPKMRPSFLEIIS 314

>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 18/205 (8%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGEL--FDRIVAQERYMEVGAAA------VIRQIA 152
           H N++    V        +++EL +GG+L  F R   + R  +  + A      V R IA
Sbjct: 107 HQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIA 165
Query: 153 EGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS----VEGYTDPVVGLFGSI 208
            G   L + + +HRD+   NCL          KI DFG++        Y      +   +
Sbjct: 166 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML-PV 224
Query: 209 DYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQT 267
            ++ PEA ++   TSK+D WS GV+L+ + S GY P+ ++SN++  + + +G        
Sbjct: 225 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG---RMDP 281
Query: 268 WKNISSSAKQLISSLLTVDPNRRPS 292
            KN      ++++      P  RP+
Sbjct: 282 PKNCPGPVYRIMTQCWQHQPEDRPN 306

>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 83/339 (24%), Positives = 134/339 (39%), Gaps = 65/339 (19%)
Query: 2   GQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXX 61
           G +   L D  +V  +L   G            GE  ++A    + IG+ + +G      
Sbjct: 12  GVKLNPLDDPNKVIKVLASDG----------KTGEQREIAYTNCKVIGNGS-FGVVFQAK 60
Query: 62  XXXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVY------EDQN 115
                ++      K+V + D    N  L + +IV+    HPNV+DL   +      +D+ 
Sbjct: 61  LVESDEVAI----KKV-LQDKRFKNRELQIMRIVK----HPNVVDLKAFFYSNGDKKDEV 111
Query: 116 GVHLILELCSGGELFDRIVAQERYMEVGAAA-------VIRQIAEGLAALHQANIVHRDL 168
            ++L+LE     E   R  A   Y ++            + Q+   LA +H   I HRD+
Sbjct: 112 FLNLVLEYVP--ETVYR--ASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDI 167
Query: 169 KPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALL-QDRITSKSDM 227
           KP+N L   D     LK++DFG + +    +P V    S  Y +PE +      T+  D+
Sbjct: 168 KPQNLLL--DPPSGVLKLIDFGSAKILIAGEPNVSXICSRYYRAPELIFGATNYTTNIDI 225
Query: 228 WSLGVILYILLSGYPPFIAQS------------NRQKQQMIMAGEFSFYEQTWKNI---- 271
           WS G ++  L+ G P F  +S                ++ I     ++ E  +  I    
Sbjct: 226 WSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHP 285
Query: 272 ---------SSSAKQLISSLLTVDPNRRPSAQELLNHPW 301
                       A  LIS LL   P+ R +A E L HP+
Sbjct: 286 FSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPF 324

>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 82/316 (25%), Positives = 133/316 (42%), Gaps = 64/316 (20%)
Query: 8   LTDEYEV-------TDILGRGGFSVVRRGIKKTCGE---TNQVAIKTLRRIGSTTPYGFP 57
           + DE+EV       +  LG+G F +V  G+ K   +     +VAIKT+    S       
Sbjct: 1   VPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM------ 54
Query: 58  XXXXXXXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGV 117
                           R+++        NE  VM++     + H +V+ L  V       
Sbjct: 55  ----------------RERIE-----FLNEASVMKEF----NCH-HVVRLLGVVSQGQPT 88
Query: 118 HLILELCSGGELFDRIVAQERYMEVGAA----------AVIRQIAEGLAALHQANIVHRD 167
            +I+EL + G+L   + +    ME               +  +IA+G+A L+    VHRD
Sbjct: 89  LVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRD 148
Query: 168 LKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPV----VGLFGSIDYVSPEALLQDRITS 223
           L   NC+     ED  +KI DFG++     TD       GL   + ++SPE+L     T+
Sbjct: 149 LAARNCMVA---EDFTVKIGDFGMTRDIXETDXXRKGGKGLL-PVRWMSPESLKDGVFTT 204
Query: 224 KSDMWSLGVILY-ILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSL 282
            SD+WS GV+L+ I      P+   SN Q  + +M G     ++   N      +L+   
Sbjct: 205 YSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG--GLLDKP-DNCPDMLLELMRMC 261
Query: 283 LTVDPNRRPSAQELLN 298
              +P  RPS  E+++
Sbjct: 262 WQYNPKMRPSFLEIIS 277

>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/304 (23%), Positives = 124/304 (40%), Gaps = 61/304 (20%)
Query: 18  LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFFPTRKQV 77
           +GRG +  V + + K  G+     I  ++RI ST                          
Sbjct: 30  IGRGAYGSVNKMVHKPSGQ-----IMAVKRIRSTV------------------------- 59
Query: 78  SVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGG---------E 128
              D     ++L+   +V   S  P ++  Y     +    + +EL S            
Sbjct: 60  ---DEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYS 116
Query: 129 LFDRIVAQERYMEVGAAAV--IRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKI 186
           + D ++ +E   ++  A V  +  + E L       I+HRD+KP N L   DR  + +K+
Sbjct: 117 VLDDVIPEEILGKITLATVKALNHLKENL------KIIHRDIKPSNILL--DRSGN-IKL 167
Query: 187 MDFGLS-----SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGY 241
            DFG+S     S+    D     + + + + P A  Q     +SD+WSLG+ LY L +G 
Sbjct: 168 CDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQG-YDVRSDVWSLGITLYELATGR 226
Query: 242 PPFIAQSN--RQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH 299
            P+   ++   Q  Q++            +  S S    ++  LT D ++RP  +ELL H
Sbjct: 227 FPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286
Query: 300 PWVI 303
           P+++
Sbjct: 287 PFIL 290

>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 82/316 (25%), Positives = 133/316 (42%), Gaps = 64/316 (20%)
Query: 8   LTDEYEV-------TDILGRGGFSVVRRGIKKTCGE---TNQVAIKTLRRIGSTTPYGFP 57
           + DE+EV       +  LG+G F +V  G+ K   +     +VAIKT+    S       
Sbjct: 10  VPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM------ 63
Query: 58  XXXXXXXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGV 117
                           R+++        NE  VM++     + H +V+ L  V       
Sbjct: 64  ----------------RERIE-----FLNEASVMKEF----NCH-HVVRLLGVVSQGQPT 97
Query: 118 HLILELCSGGELFDRIVAQERYMEVGAA----------AVIRQIAEGLAALHQANIVHRD 167
            +I+EL + G+L   + +    ME               +  +IA+G+A L+    VHRD
Sbjct: 98  LVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRD 157
Query: 168 LKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPV----VGLFGSIDYVSPEALLQDRITS 223
           L   NC+     ED  +KI DFG++     TD       GL   + ++SPE+L     T+
Sbjct: 158 LAARNCMVA---EDFTVKIGDFGMTRDIXETDXXRKGGKGLL-PVRWMSPESLKDGVFTT 213
Query: 224 KSDMWSLGVILY-ILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSL 282
            SD+WS GV+L+ I      P+   SN Q  + +M G     ++   N      +L+   
Sbjct: 214 YSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG--GLLDKP-DNCPDMLFELMRMC 270
Query: 283 LTVDPNRRPSAQELLN 298
              +P  RPS  E+++
Sbjct: 271 WQYNPKMRPSFLEIIS 286

>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major Length = 360

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 79/343 (23%), Positives = 131/343 (38%), Gaps = 85/343 (24%)
Query: 3   QETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXX 62
           + +RK  D ++V  + G+G F  V+ G +K+ G +  VAIK +                 
Sbjct: 16  ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMS--VAIKKV----------------- 56
Query: 63  XXXXQIGFFPTRKQVSVSDALLTN-EILVMRKIVENVSPHPNVIDLYDVY-----EDQNG 116
                           + D    N E+ +M+ +   V  HPN++ L   +      D+  
Sbjct: 57  ----------------IQDPRFRNRELQIMQDLA--VLHHPNIVQLQSYFYTLGERDRRD 98
Query: 117 VHL---------ILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRD 167
           ++L          L  C       ++      ++V    +IR I  G   L   N+ HRD
Sbjct: 99  IYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSI--GCLHLPSVNVCHRD 156
Query: 168 LKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDR-ITSKSD 226
           +KP N L   +  D  LK+ DFG +     ++P V    S  Y +PE +  ++  T+  D
Sbjct: 157 IKPHNVLV--NEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVD 214
Query: 227 MWSLGVILYILLSGYPPFIAQSNRQKQQMIM-----------------AGEFSFYEQT-- 267
           +WS+G I   ++ G P F   ++  +   I+                   +   Y     
Sbjct: 215 IWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGI 274
Query: 268 -WKNISS--------SAKQLISSLLTVDPNRRPSAQELLNHPW 301
            W N+ S         A  L+S+LL   P  R    E L HP+
Sbjct: 275 PWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPY 317

>pdb|2JUL|A Chain A, Nmr Structure Of Dream Length = 256

Iteration: 1
 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 78/169 (46%), Gaps = 20/169 (11%)
Query: 350 LKNLLGSHDLNEEEIQNLRIHFRTICANG--DNATL----SEFEEVLKAMNMSSLVPLAP 403
           L  L       ++E+Q+L   F+  C  G  D  T     S+F               A 
Sbjct: 79  LDQLQAQTKFTKKELQSLYRGFKNECPTGLVDEDTFKLIYSQF------FPQGDATTYAH 132
Query: 404 RIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLR 463
            +F+ FD + +G +   + + G S L +    + L+  F +YDI++ GCITKEE+ ++++
Sbjct: 133 FLFNAFDADGNGAIHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGCITKEEMLAIMK 192
Query: 464 ALPD----DCLPVDITEPGKLDEI---FDLMDANNDGKVTFDEFRAAMQ 505
           ++ D       P+ + E   L+ +   F  MD N DG VT DEF    Q
Sbjct: 193 SIYDMMGRHTYPI-LREDAPLEHVERFFQKMDRNQDGVVTIDEFLETCQ 240

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 65.9 bits (159), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 93/205 (45%), Gaps = 14/205 (6%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE--RYMEVGAAAVIRQIAEGLAAL 158
           H N+I L  V      + +I E    G L D+ + ++   +  +    ++R IA G+  L
Sbjct: 105 HHNIIRLEGVISKYKPMMIITEYMENGAL-DKFLREKDGEFSVLQLVGMLRGIAAGMKYL 163
Query: 159 HQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV----EGYTDPVVGLFGSIDYVSPE 214
              N VHRDL   N L      +   K+ DFGLS V       T    G    I + +PE
Sbjct: 164 ANMNYVHRDLAARNILV---NSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPE 220
Query: 215 ALLQDRITSKSDMWSLGVILY-ILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
           A+   + TS SD+WS G++++ ++  G  P+   SN +  + I  G   F   T  +  S
Sbjct: 221 AISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDG---FRLPTPMDCPS 277
Query: 274 SAKQLISSLLTVDPNRRPSAQELLN 298
           +  QL+      +  RRP   ++++
Sbjct: 278 AIYQLMMQCWQQERARRPKFADIVS 302

>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318

Iteration: 1
 Score = 65.9 bits (159), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 14/205 (6%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE--RYMEVGAAAVIRQIAEGLAAL 158
           HPNV+ L  V      V +++E    G L D  + +   ++  +    ++R IA G+  L
Sbjct: 103 HPNVVHLEGVVTRGKPVMIVIEFMENGAL-DAFLRKHDGQFTVIQLVGMLRGIAAGMRYL 161
Query: 159 HQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV-EGYTDPVVGLFGS---IDYVSPE 214
                VHRDL   N L      +   K+ DFGLS V E   + V    G    + + +PE
Sbjct: 162 ADMGYVHRDLAARNILV---NSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPE 218
Query: 215 ALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
           A+   + TS SD+WS G++++ ++S G  P+   SN   Q +I A E  +      +  +
Sbjct: 219 AIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN---QDVIKAIEEGYRLPAPMDCPA 275
Query: 274 SAKQLISSLLTVDPNRRPSAQELLN 298
              QL+      +   RP  ++++ 
Sbjct: 276 GLHQLMLDCWQKERAERPKFEQIVG 300

>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297

Iteration: 1
 Score = 65.9 bits (159), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 103/216 (47%), Gaps = 33/216 (15%)
Query: 72  PTRKQVSVSDALLTNEILVMRK-------IVENVSPHPNVIDLYDVYEDQNGVHLILELC 124
           PT+ ++ V+   L +  L  RK       ++ N+  H +++  Y V  D + + ++ E  
Sbjct: 41  PTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQ-HEHIVKFYGVCGDGDPLIMVFEYM 99
Query: 125 SGGEL--FDR---------IVAQERYM--EVGAAAVIR---QIAEGLAALHQANIVHRDL 168
             G+L  F R         +  Q R    E+G + ++    QIA G+  L   + VHRDL
Sbjct: 100 KHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDL 159
Query: 169 KPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGS----IDYVSPEALLQDRITSK 224
              NCL      +  +KI DFG+S  + Y+     + G     I ++ PE+++  + T++
Sbjct: 160 ATRNCLV---GANLLVKIGDFGMSR-DVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTE 215
Query: 225 SDMWSLGVILY-ILLSGYPPFIAQSNRQKQQMIMAG 259
           SD+WS GVIL+ I   G  P+   SN +  + I  G
Sbjct: 216 SDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQG 251

>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301

Iteration: 1
 Score = 65.9 bits (159), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 81/316 (25%), Positives = 132/316 (41%), Gaps = 64/316 (20%)
Query: 8   LTDEYEV-------TDILGRGGFSVVRRGIKKTCGE---TNQVAIKTLRRIGSTTPYGFP 57
           + DE+EV       +  LG+G F +V  G+ K   +     +VAIKT+    S       
Sbjct: 3   VPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM------ 56
Query: 58  XXXXXXXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGV 117
                           R+++        NE  VM++     + H +V+ L  V       
Sbjct: 57  ----------------RERIE-----FLNEASVMKEF----NCH-HVVRLLGVVSQGQPT 90
Query: 118 HLILELCSGGELFDRIVAQERYMEVGAA----------AVIRQIAEGLAALHQANIVHRD 167
            +I+EL + G+L   + +    ME               +  +IA+G+A L+    VHRD
Sbjct: 91  LVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRD 150
Query: 168 LKPENCLFLNDREDSPLKIMDFGLS----SVEGYTDPVVGLFGSIDYVSPEALLQDRITS 223
           L   NC      ED  +KI DFG++      + Y     GL   + ++SPE+L     T+
Sbjct: 151 LAARNCXVA---EDFTVKIGDFGMTRDIYETDYYRKGGKGLL-PVRWMSPESLKDGVFTT 206
Query: 224 KSDMWSLGVILY-ILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSL 282
            SD+WS GV+L+ I      P+   SN Q  + +M G     ++   N      +L+   
Sbjct: 207 YSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG--GLLDKP-DNCPDMLLELMRMC 263
Query: 283 LTVDPNRRPSAQELLN 298
              +P  RPS  E+++
Sbjct: 264 WQYNPKMRPSFLEIIS 279

>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306

Iteration: 1
 Score = 65.9 bits (159), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 93/207 (44%), Gaps = 18/207 (8%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE--RYMEVGAAAVIRQIAEGLAAL 158
           HPN+I L  V      V +I E    G L D  + +   R+  +    ++R I  G+  L
Sbjct: 89  HPNIIHLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMKYL 147
Query: 159 HQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV------EGYTDPVVGLFGSIDYVS 212
              + VHRDL   N L      +   K+ DFG+S V        YT    G    I + +
Sbjct: 148 SDMSAVHRDLAARNILV---NSNLVCKVSDFGMSRVLEDDPEAAYT--TRGGKIPIRWTA 202
Query: 213 PEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNI 271
           PEA+   + TS SD+WS G++++ ++S G  P+   SN   Q +I A E  +      + 
Sbjct: 203 PEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN---QDVIKAIEEGYRLPPPMDC 259
Query: 272 SSSAKQLISSLLTVDPNRRPSAQELLN 298
             +  QL+      + + RP   +++N
Sbjct: 260 PIALHQLMLDCWQKERSDRPKFGQIVN 286

>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291

Iteration: 1
 Score = 65.9 bits (159), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 93/207 (44%), Gaps = 18/207 (8%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE--RYMEVGAAAVIRQIAEGLAAL 158
           HPN+I L  V      V +I E    G L D  + +   R+  +    ++R I  G+  L
Sbjct: 74  HPNIIHLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMKYL 132
Query: 159 HQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV------EGYTDPVVGLFGSIDYVS 212
              + VHRDL   N L      +   K+ DFG+S V        YT    G    I + +
Sbjct: 133 SDMSYVHRDLAARNILV---NSNLVCKVSDFGMSRVLEDDPEAAYT--TRGGKIPIRWTA 187
Query: 213 PEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNI 271
           PEA+   + TS SD+WS G++++ ++S G  P+   SN   Q +I A E  +      + 
Sbjct: 188 PEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN---QDVIKAIEEGYRLPPPMDC 244
Query: 272 SSSAKQLISSLLTVDPNRRPSAQELLN 298
             +  QL+      + + RP   +++N
Sbjct: 245 PIALHQLMLDCWQKERSDRPKFGQIVN 271

>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304

Iteration: 1
 Score = 65.5 bits (158), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 76/154 (49%), Gaps = 12/154 (7%)
Query: 150 QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS----SVEGYTDPVVGLF 205
           +IA+G+A L+    VHRDL   NC+     ED  +KI DFG++      + Y     GL 
Sbjct: 136 EIADGMAYLNANKFVHRDLAARNCMVA---EDFTVKIGDFGMTRDIYETDYYRKGGKGLL 192
Query: 206 GSIDYVSPEALLQDRITSKSDMWSLGVILY-ILLSGYPPFIAQSNRQKQQMIMAGEFSFY 264
             + ++SPE+L     T+ SD+WS GV+L+ I      P+   SN Q  + +M G     
Sbjct: 193 -PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG--GLL 249
Query: 265 EQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN 298
           ++   N      +L+      +P  RPS  E+++
Sbjct: 250 DKP-DNCPDMLFELMRMCWQYNPKMRPSFLEIIS 282

>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285

Iteration: 1
 Score = 65.5 bits (158), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 93/207 (44%), Gaps = 18/207 (8%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE--RYMEVGAAAVIRQIAEGLAAL 158
           HPN+I L  V      V +I E    G L D  + +   R+  +    ++R I  G+  L
Sbjct: 68  HPNIIHLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMKYL 126
Query: 159 HQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV------EGYTDPVVGLFGSIDYVS 212
              + VHRDL   N L      +   K+ DFG+S V        YT    G    I + +
Sbjct: 127 SDMSYVHRDLAARNILV---NSNLVCKVSDFGMSRVLEDDPEAAYT--TRGGKIPIRWTA 181
Query: 213 PEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNI 271
           PEA+   + TS SD+WS G++++ ++S G  P+   SN   Q +I A E  +      + 
Sbjct: 182 PEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN---QDVIKAIEEGYRLPPPMDC 238
Query: 272 SSSAKQLISSLLTVDPNRRPSAQELLN 298
             +  QL+      + + RP   +++N
Sbjct: 239 PIALHQLMLDCWQKERSDRPKFGQIVN 265

>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302

Iteration: 1
 Score = 65.5 bits (158), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 53/163 (32%), Positives = 80/163 (49%), Gaps = 21/163 (12%)
Query: 86  NEILVMRKIVENVSPHPNVIDLYDVYEDQ--NGVHLILELCSGGELFDRIVAQERYMEVG 143
            EI ++R +      H ++I      EDQ    + L++E    G L D +        +G
Sbjct: 65  QEIDILRTLY-----HEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS----IG 115
Query: 144 AAAVI---RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV--EGYT 198
            A ++   +QI EG+A LH  + +HR+L   N L  NDR    +KI DFGL+    EG+ 
Sbjct: 116 LAQLLLFAQQICEGMAYLHSQHYIHRNLAARNVLLDNDRL---VKIGDFGLAKAVPEGHE 172
Query: 199 DPVVGLFG--SIDYVSPEALLQDRITSKSDMWSLGVILYILLS 239
              V   G   + + +PE L + +    SD+WS GV LY LL+
Sbjct: 173 YYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215

>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 65.5 bits (158), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 94/189 (49%), Gaps = 14/189 (7%)
Query: 79  VSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQER 138
            +D  L +E+L    +++ +  +P ++ +  + E ++ + L++E+   G L ++ + Q R
Sbjct: 50  ANDPALKDELLAEANVMQQLD-NPYIVRMIGICEAESWM-LVMEMAELGPL-NKYLQQNR 106
Query: 139 YM-EVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV--- 194
           ++ +     ++ Q++ G+  L ++N VHRDL   N L +        KI DFGLS     
Sbjct: 107 HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHY---AKISDFGLSKALRA 163
Query: 195 --EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQ 251
               Y     G +  + + +PE +   + +SKSD+WS GV+++   S G  P+      +
Sbjct: 164 DENXYKAQTHGKW-PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 222
Query: 252 KQQMIMAGE 260
              M+  GE
Sbjct: 223 VTAMLEKGE 231

>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302

Iteration: 1
 Score = 65.1 bits (157), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 53/163 (32%), Positives = 80/163 (49%), Gaps = 21/163 (12%)
Query: 86  NEILVMRKIVENVSPHPNVIDLYDVYEDQ--NGVHLILELCSGGELFDRIVAQERYMEVG 143
            EI ++R +      H ++I      EDQ    + L++E    G L D +        +G
Sbjct: 65  QEIDILRTLY-----HEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS----IG 115
Query: 144 AAAVI---RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV--EGYT 198
            A ++   +QI EG+A LH  + +HR+L   N L  NDR    +KI DFGL+    EG+ 
Sbjct: 116 LAQLLLFAQQICEGMAYLHAQHYIHRNLAARNVLLDNDRL---VKIGDFGLAKAVPEGHE 172
Query: 199 DPVVGLFG--SIDYVSPEALLQDRITSKSDMWSLGVILYILLS 239
              V   G   + + +PE L + +    SD+WS GV LY LL+
Sbjct: 173 YYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215

>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322

Iteration: 1
 Score = 65.1 bits (157), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 80/316 (25%), Positives = 130/316 (41%), Gaps = 64/316 (20%)
Query: 8   LTDEYEV-------TDILGRGGFSVVRRGIKKTCGE---TNQVAIKTLRRIGSTTPYGFP 57
           + DE+EV       +  LG+G F +V  G+ K   +     +VAIKT+    S       
Sbjct: 16  VPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM------ 69
Query: 58  XXXXXXXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGV 117
                           R+++        NE  VM++     + H +V+ L  V       
Sbjct: 70  ----------------RERIE-----FLNEASVMKEF----NCH-HVVRLLGVVSQGQPT 103
Query: 118 HLILELCSGGELFDRIVAQERYMEVGAA----------AVIRQIAEGLAALHQANIVHRD 167
            +I+EL + G+L   + +    M                +  +IA+G+A L+    VHRD
Sbjct: 104 LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRD 163
Query: 168 LKPENCLFLNDREDSPLKIMDFGLS----SVEGYTDPVVGLFGSIDYVSPEALLQDRITS 223
           L   NC+     ED  +KI DFG++      + Y     GL   + ++SPE+L     T+
Sbjct: 164 LAARNCMVA---EDFTVKIGDFGMTRDIYETDYYRKGGKGLL-PVRWMSPESLKDGVFTT 219
Query: 224 KSDMWSLGVILY-ILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSL 282
            SD+WS GV+L+ I      P+   SN Q  + +M G          N      +L+   
Sbjct: 220 YSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLL---DKPDNCPDMLFELMRMC 276
Query: 283 LTVDPNRRPSAQELLN 298
              +P  RPS  E+++
Sbjct: 277 WQYNPKMRPSFLEIIS 292

>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318

Iteration: 1
 Score = 65.1 bits (157), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 53/163 (32%), Positives = 79/163 (48%), Gaps = 21/163 (12%)
Query: 86  NEILVMRKIVENVSPHPNVIDLYDVYEDQNG--VHLILELCSGGELFDRIVAQERYMEVG 143
            EI ++R +      H ++I      ED     + L++E    G L D +        +G
Sbjct: 82  QEIDILRTLY-----HEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS----IG 132
Query: 144 AAAVI---RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV--EGYT 198
            A ++   +QI EG+A LH  + +HRDL   N L  NDR    +KI DFGL+    EG+ 
Sbjct: 133 LAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRL---VKIGDFGLAKAVPEGHE 189
Query: 199 DPVVGLFG--SIDYVSPEALLQDRITSKSDMWSLGVILYILLS 239
              V   G   + + +PE L + +    SD+WS GV LY LL+
Sbjct: 190 XYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232

>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 104/242 (42%), Gaps = 53/242 (21%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIR-------QIAE 153
           H N+I+L  V    + +HLI E              ++YM+      +R       Q+  
Sbjct: 92  HRNIIELKSVIHHNHRLHLIFEYAEND--------LKKYMDKNPDVSMRVIKSFLYQLIN 143
Query: 154 GLAALHQANIVHRDLKPENCLF-LNDREDSP-LKIMDFGLSSVEG-----YTDPVVGLFG 206
           G+   H    +HRDLKP+N L  ++D  ++P LKI DFGL+   G     +T  ++ L+ 
Sbjct: 144 GVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLW- 202
Query: 207 SIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYE 265
              Y  PE LL  R  S S D+WS+  I   +L   P F   S   +   I        +
Sbjct: 203 ---YRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDD 259
Query: 266 QTWKNISS--------------SAKQLI------------SSLLTVDPNRRPSAQELLNH 299
            TW  +++              + K+++            +++L +DP +R SA+  L H
Sbjct: 260 TTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH 319
Query: 300 PW 301
           P+
Sbjct: 320 PY 321

>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/289 (24%), Positives = 120/289 (41%), Gaps = 67/289 (23%)
Query: 73  TRKQVSVSDALLTNE-----ILVMRKI-VENVSPHPNVIDLYDV-------YEDQNG-VH 118
           T ++V++   L+ NE     I  +R+I +  +  H NV++L ++       Y    G ++
Sbjct: 42  TGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIY 101
Query: 119 LILELCSG--GELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFL 176
           L+ + C      L   ++ +    E+    V++ +  GL  +H+  I+HRD+K  N L  
Sbjct: 102 LVFDFCEHDLAGLLSNVLVKFTLSEI--KRVMQMLLNGLYYIHRNKILHRDMKAANVLIT 159
Query: 177 NDREDSPLKIMDFGL---------SSVEGYTDPVVGLFGSIDYVSPEALLQDR-ITSKSD 226
               D  LK+ DFGL         S    Y + VV L+    Y  PE LL +R      D
Sbjct: 160 ---RDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLW----YRPPELLLGERDYGPPID 212
Query: 227 MWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEF--SFYEQTWKNISS----------- 273
           +W  G I+  + +  P  I Q N ++ Q+ +  +   S   + W N+ +           
Sbjct: 213 LWGAGCIMAEMWTRSP--IMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVK 270
Query: 274 -----------------SAKQLISSLLTVDPNRRPSAQELLNHPWVIGD 305
                             A  LI  LL +DP +R  + + LNH +   D
Sbjct: 271 GQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSD 319

>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/289 (24%), Positives = 120/289 (41%), Gaps = 67/289 (23%)
Query: 73  TRKQVSVSDALLTNE-----ILVMRKI-VENVSPHPNVIDLYDV-------YEDQNG-VH 118
           T ++V++   L+ NE     I  +R+I +  +  H NV++L ++       Y    G ++
Sbjct: 42  TGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIY 101
Query: 119 LILELCSG--GELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFL 176
           L+ + C      L   ++ +    E+    V++ +  GL  +H+  I+HRD+K  N L  
Sbjct: 102 LVFDFCEHDLAGLLSNVLVKFTLSEI--KRVMQMLLNGLYYIHRNKILHRDMKAANVLI- 158
Query: 177 NDREDSPLKIMDFGL---------SSVEGYTDPVVGLFGSIDYVSPEALLQDR-ITSKSD 226
               D  LK+ DFGL         S    Y + VV L+    Y  PE LL +R      D
Sbjct: 159 --TRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLW----YRPPELLLGERDYGPPID 212
Query: 227 MWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEF--SFYEQTWKNISS----------- 273
           +W  G I+  + +  P  I Q N ++ Q+ +  +   S   + W N+ +           
Sbjct: 213 LWGAGCIMAEMWTRSP--IMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVK 270
Query: 274 -----------------SAKQLISSLLTVDPNRRPSAQELLNHPWVIGD 305
                             A  LI  LL +DP +R  + + LNH +   D
Sbjct: 271 GQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSD 319

>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/162 (33%), Positives = 81/162 (50%), Gaps = 21/162 (12%)
Query: 87  EILVMRKIVENVSPHPNVIDLYDVYEDQ--NGVHLILELCSGGELFDRIVAQERYMEVGA 144
           EI ++R +      H +++      EDQ    V L++E    G L D +    R+  VG 
Sbjct: 60  EIEILRTLY-----HEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL---PRHC-VGL 110
Query: 145 AAVI---RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV--EGYTD 199
           A ++   +QI EG+A LH  + +HR L   N L  NDR    +KI DFGL+    EG+  
Sbjct: 111 AQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRL---VKIGDFGLAKAVPEGHEY 167
Query: 200 PVVGLFG--SIDYVSPEALLQDRITSKSDMWSLGVILYILLS 239
             V   G   + + +PE L + +    SD+WS GV LY LL+
Sbjct: 168 YRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 209

>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/162 (33%), Positives = 81/162 (50%), Gaps = 21/162 (12%)
Query: 87  EILVMRKIVENVSPHPNVIDLYDVYEDQ--NGVHLILELCSGGELFDRIVAQERYMEVGA 144
           EI ++R +      H +++      EDQ    V L++E    G L D +    R+  VG 
Sbjct: 61  EIEILRTLY-----HEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL---PRHC-VGL 111
Query: 145 AAVI---RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV--EGYTD 199
           A ++   +QI EG+A LH  + +HR L   N L  NDR    +KI DFGL+    EG+  
Sbjct: 112 AQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRL---VKIGDFGLAKAVPEGHEY 168
Query: 200 PVVGLFG--SIDYVSPEALLQDRITSKSDMWSLGVILYILLS 239
             V   G   + + +PE L + +    SD+WS GV LY LL+
Sbjct: 169 YRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 210

>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/289 (24%), Positives = 120/289 (41%), Gaps = 67/289 (23%)
Query: 73  TRKQVSVSDALLTNE-----ILVMRKI-VENVSPHPNVIDLYDV-------YEDQNG-VH 118
           T ++V++   L+ NE     I  +R+I +  +  H NV++L ++       Y    G ++
Sbjct: 41  TGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIY 100
Query: 119 LILELCSG--GELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFL 176
           L+ + C      L   ++ +    E+    V++ +  GL  +H+  I+HRD+K  N L  
Sbjct: 101 LVFDFCEHDLAGLLSNVLVKFTLSEI--KRVMQMLLNGLYYIHRNKILHRDMKAANVLI- 157
Query: 177 NDREDSPLKIMDFGL---------SSVEGYTDPVVGLFGSIDYVSPEALLQDR-ITSKSD 226
               D  LK+ DFGL         S    Y + VV L+    Y  PE LL +R      D
Sbjct: 158 --TRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLW----YRPPELLLGERDYGPPID 211
Query: 227 MWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEF--SFYEQTWKNISS----------- 273
           +W  G I+  + +  P  I Q N ++ Q+ +  +   S   + W N+ +           
Sbjct: 212 LWGAGCIMAEMWTRSP--IMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVK 269
Query: 274 -----------------SAKQLISSLLTVDPNRRPSAQELLNHPWVIGD 305
                             A  LI  LL +DP +R  + + LNH +   D
Sbjct: 270 GQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSD 318

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 77/150 (51%), Gaps = 20/150 (13%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRI---------VAQERYMEVGAAAVIRQI 151
           HP+++ L    +++N + LI +    G L   +         ++ E+ +E+   A     
Sbjct: 94  HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGA----- 148
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS---SVEGYTDPVVGLFGSI 208
           A GL  LH   I+HRD+K  N L   D    P KI DFG+S   +  G T     + G++
Sbjct: 149 ARGLHYLHTRAIIHRDVKSINILL--DENFVP-KITDFGISKKGTELGQTHLXXVVKGTL 205
Query: 209 DYVSPEALLQDRITSKSDMWSLGVILYILL 238
            Y+ PE  ++ R+T KSD++S GV+L+ +L
Sbjct: 206 GYIDPEYFIKGRLTEKSDVYSFGVVLFEVL 235

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 15/162 (9%)
Query: 87  EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVG--- 143
           EI VM K       H N+++L     D + + L+      G L DR+   +    +    
Sbjct: 80  EIKVMAK-----CQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 134
Query: 144 AAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS-SVEGYTDPVV 202
              + +  A G+  LH+ + +HRD+K  N L     E    KI DFGL+ + E +   V+
Sbjct: 135 RCKIAQGAANGINFLHENHHIHRDIKSANILL---DEAFTAKISDFGLARASEKFAQTVM 191
Query: 203 G--LFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYP 242
              + G+  Y++PEAL +  IT KSD++S GV+L  +++G P
Sbjct: 192 XSRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGLP 232

>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2 N1-30 Length = 183

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 81/187 (43%), Gaps = 32/187 (17%)
Query: 330 RAAAIASVLSSTIFLRRT-----KKLKNLLGSHDLNEEEIQNLRIHFRTICANGDNATLS 384
           R   +  + + T F +R      +  KN   S  +NEE  + +   F     +GD +T +
Sbjct: 2   RPEGLEQLEAQTNFTKRELQVLYRGFKNEXPSGVVNEETFKQIYAQF---FPHGDASTYA 58
Query: 385 EFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQM 444
            +                  +F+ FD  + G+V   + +   S L +    + LR  F +
Sbjct: 59  HY------------------LFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNL 100
Query: 445 YDIDRSGCITKEEVASMLRALPD----DCLPV--DITEPGKLDEIFDLMDANNDGKVTFD 498
           YDI++ G I KEE+  +++A+ D       PV  + T    +D  F  MD N DG VT D
Sbjct: 101 YDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLD 160
Query: 499 EFRAAMQ 505
           EF  + Q
Sbjct: 161 EFLESXQ 167

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/118 (34%), Positives = 65/118 (55%), Gaps = 9/118 (7%)
Query: 147 VIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFG 206
           + +QIA G+  L   + VHRDL   NCL     E+  +KI DFG+S  + Y+     + G
Sbjct: 133 IAQQIAAGMVYLASQHFVHRDLATRNCLV---GENLLVKIGDFGMSR-DVYSTDYYRVGG 188
Query: 207 S----IDYVSPEALLQDRITSKSDMWSLGVILY-ILLSGYPPFIAQSNRQKQQMIMAG 259
                I ++ PE+++  + T++SD+WSLGV+L+ I   G  P+   SN +  + I  G
Sbjct: 189 HTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQG 246

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 15/162 (9%)
Query: 87  EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVG--- 143
           EI VM K       H N+++L     D + + L+      G L DR+   +    +    
Sbjct: 80  EIKVMAK-----CQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 134
Query: 144 AAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS-SVEGYTDPVV 202
              + +  A G+  LH+ + +HRD+K  N L     E    KI DFGL+ + E +   V+
Sbjct: 135 RCKIAQGAANGINFLHENHHIHRDIKSANILL---DEAFTAKISDFGLARASEKFAQTVM 191
Query: 203 G--LFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYP 242
              + G+  Y++PEAL +  IT KSD++S GV+L  +++G P
Sbjct: 192 XXRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGLP 232

>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow Inactivation Length = 229

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 10/169 (5%)
Query: 345 RRTKKLKNLLGSHDLNEEEIQNLRIHFRTICANG--DNATLSEFEEVLKAMNMSSLVPLA 402
            R + L+ L       ++E+Q L   F+  C +G  +  T  E          S+    A
Sbjct: 47  HRPEALELLEAQSKFTKKELQILYRGFKNECPSGVVNEETFKEIYSQFFPQGDST--TYA 104
Query: 403 PRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASML 462
             +F+ FD + +G V   + + G S L +    + L   F +YDI++ G ITKEE+  ++
Sbjct: 105 HFLFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIM 164
Query: 463 RALPD---DCLPVDITEPG---KLDEIFDLMDANNDGKVTFDEFRAAMQ 505
           +A+ D    C    + E      ++  F  MD N DG VT DEF  + Q
Sbjct: 165 KAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIESCQ 213

>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 119/289 (41%), Gaps = 67/289 (23%)
Query: 73  TRKQVSVSDALLTNE-----ILVMRKI-VENVSPHPNVIDLYDVYEDQNG--------VH 118
           T ++V++   L+ NE     I  +R+I +  +  H NV++L ++   +          ++
Sbjct: 42  TGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKASIY 101
Query: 119 LILELCSG--GELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFL 176
           L+ + C      L   ++ +    E+    V++ +  GL  +H+  I+HRD+K  N L  
Sbjct: 102 LVFDFCEHDLAGLLSNVLVKFTLSEI--KRVMQMLLNGLYYIHRNKILHRDMKAANVLI- 158
Query: 177 NDREDSPLKIMDFGL---------SSVEGYTDPVVGLFGSIDYVSPEALLQDR-ITSKSD 226
               D  LK+ DFGL         S    Y + VV L+    Y  PE LL +R      D
Sbjct: 159 --TRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLW----YRPPELLLGERDYGPPID 212
Query: 227 MWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEF--SFYEQTWKNISS----------- 273
           +W  G I+  + +  P  I Q N ++ Q+ +  +   S   + W N+ +           
Sbjct: 213 LWGAGCIMAEMWTRSP--IMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVK 270
Query: 274 -----------------SAKQLISSLLTVDPNRRPSAQELLNHPWVIGD 305
                             A  LI  LL +DP +R  + + LNH +   D
Sbjct: 271 GQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSD 319

>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound Length = 204

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 12/149 (8%)
Query: 363 EIQNLRIHFRTICANGDNATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREI 422
           ++Q     F   C +G    + EF+   K  +          +F  FD N D T+D  E 
Sbjct: 23  QLQEWYKKFLEECPSG-TLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEY 81
Query: 423 LCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRA---LPDDC-LPVDITEPG 478
           +   + + +   +  L+  F++YD DR+GCI ++E+  ++ +   L   C + V+  + G
Sbjct: 82  VAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQG 141
Query: 479 KL-------DEIFDLMDANNDGKVTFDEF 500
           KL       D IF L+D N DG+++ +EF
Sbjct: 142 KLLTPEEVVDRIFLLVDENGDGQLSLNEF 170

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 15/162 (9%)
Query: 87  EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVG--- 143
           EI VM K       H N+++L     D + + L+      G L DR+   +    +    
Sbjct: 74  EIKVMAK-----CQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 128
Query: 144 AAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS-SVEGYTDPVV 202
              + +  A G+  LH+ + +HRD+K  N L     E    KI DFGL+ + E +   V+
Sbjct: 129 RCKIAQGAANGINFLHENHHIHRDIKSANILL---DEAFTAKISDFGLARASEKFAQXVM 185
Query: 203 G--LFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYP 242
              + G+  Y++PEAL +  IT KSD++S GV+L  +++G P
Sbjct: 186 XXRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGLP 226

>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1) Length = 311

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 94/207 (45%), Gaps = 13/207 (6%)
Query: 96  ENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYM-EVGAAAVIRQIAEG 154
           E V  HP  + L   +E+   ++L  ELC G  L     A    + E      +R     
Sbjct: 111 EKVGQHPCCVRLEQAWEEGGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLA 169
Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPE 214
           LA LH   +VH D+KP N +FL  R     K+ DFGL    G         G   Y++PE
Sbjct: 170 LAHLHSQGLVHLDVKPAN-IFLGPRGRC--KLGDFGLLVELGTAGAGEVQEGDPRYMAPE 226
Query: 215 ALLQDRITSKSDMWSLGV-ILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISS 273
            LLQ    + +D++SLG+ IL +  +   P   +  +Q +Q  +  EF+        +SS
Sbjct: 227 -LLQGSYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLPPEFT------AGLSS 279
Query: 274 SAKQLISSLLTVDPNRRPSAQELLNHP 300
             + ++  +L  DP  R +A+ LL  P
Sbjct: 280 ELRSVLVMMLEPDPKLRATAEALLALP 306

>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 63/115 (54%), Gaps = 17/115 (14%)
Query: 146 AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS----SVEGY---- 197
            + RQ+A G+A L +   VHRDL   NCL     E+  +KI DFGLS    S + Y    
Sbjct: 178 CIARQVAAGMAYLSERKFVHRDLATRNCLV---GENMVVKIADFGLSRNIYSADYYKADG 234
Query: 198 TDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQ 251
            D +      I ++ PE++  +R T++SD+W+ GV+L+ + S G  P+   ++ +
Sbjct: 235 NDAI-----PIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEE 284

>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 96/224 (42%), Gaps = 27/224 (12%)
Query: 93  KIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQ-- 150
           +++  +  HPN+I+L    E +  ++L +E    G L D  + + R +E   A  I    
Sbjct: 67  EVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLD-FLRKSRVLETDPAFAIANST 125
Query: 151 ---------------IAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS-SV 194
                          +A G+  L Q   +HRDL   N L     E+   KI DFGLS   
Sbjct: 126 ASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV---GENYVAKIADFGLSRGQ 182
Query: 195 EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQ 253
           E Y    +G    + +++ E+L     T+ SD+WS GV+L+ ++S G  P+   +  +  
Sbjct: 183 EVYVKKTMGRL-PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY 241
Query: 254 QMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELL 297
           + +  G   +  +   N       L+       P  RPS  ++L
Sbjct: 242 EKLPQG---YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 282

>pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 96/224 (42%), Gaps = 27/224 (12%)
Query: 93  KIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQ-- 150
           +++  +  HPN+I+L    E +  ++L +E    G L D  + + R +E   A  I    
Sbjct: 77  EVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLD-FLRKSRVLETDPAFAIANST 135
Query: 151 ---------------IAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS-SV 194
                          +A G+  L Q   +HRDL   N L     E+   KI DFGLS   
Sbjct: 136 ASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV---GENYVAKIADFGLSRGQ 192
Query: 195 EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQ 253
           E Y    +G    + +++ E+L     T+ SD+WS GV+L+ ++S G  P+   +  +  
Sbjct: 193 EVYVKKTMGRL-PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY 251
Query: 254 QMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELL 297
           + +  G   +  +   N       L+       P  RPS  ++L
Sbjct: 252 EKLPQG---YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 292

>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 88/195 (45%), Gaps = 17/195 (8%)
Query: 121 LELCSGGELFDRIVAQ--ERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLND 178
           +E C  G L   I  +  E+  +V A  +  QI +G+  +H   ++HRDLKP N   ++ 
Sbjct: 113 MEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDT 172
Query: 179 REDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILL 238
           ++   +KI DFGL +            G++ Y+SPE +       + D+++LG+IL  LL
Sbjct: 173 KQ---VKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
Query: 239 SGYPPFIAQSN--RQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
                    S      +  I++  F   E+T          L+  LL+  P  RP+  E+
Sbjct: 230 HVCDTAFETSKFFTDLRDGIISDIFDKKEKT----------LLQKLLSKKPEDRPNTSEI 279
Query: 297 LNHPWVIGDSAKEEE 311
           L    V   S ++ E
Sbjct: 280 LRTLTVWKKSPEKNE 294

>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352

Iteration: 1
 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 81/329 (24%), Positives = 125/329 (37%), Gaps = 66/329 (20%)
Query: 12  YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFF 71
           Y  T ++G G F VV +   K C     VAIK                            
Sbjct: 22  YTDTKVIGNGSFGVVYQA--KLCDSGELVAIK---------------------------- 51
Query: 72  PTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDL----YDVYEDQNGVHLILELCSGG 127
               +V    A    E+ +MRK+      H N++ L    Y   E ++ V+L L L    
Sbjct: 52  ----KVLQGKAFKNRELQIMRKL-----DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP 102
Query: 128 ELFDRIV-----AQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDS 182
           E   R+      A++    +     + Q+   LA +H   I HRD+KP+N L   D + +
Sbjct: 103 ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTA 160
Query: 183 PLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALL-QDRITSKSDMWSLGVILYILLSGY 241
            LK+ DFG +      +P V    S  Y +PE +      TS  D+WS G +L  LL G 
Sbjct: 161 VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
Query: 242 PPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSA-QELLNHP 300
           P F   S   +   I+           K + +  ++ I  +   +PN    A  ++  HP
Sbjct: 221 PIFPGDSGVDQLVEII-----------KVLGTPTREQIREM---NPNYTEFAFPQIKAHP 266
Query: 301 WVIGDSAKEEEMDAEIVSRLQSFNARRKL 329
           W      +       + SRL  +    +L
Sbjct: 267 WTKVFRPRTPPEAIALCSRLLEYTPTARL 295

>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317

Iteration: 1
 Score = 62.8 bits (151), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 56/221 (25%), Positives = 102/221 (46%), Gaps = 25/221 (11%)
Query: 93  KIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFD---RIVAQERYMEVGAAAVIR 149
           KI+ ++  H N+++L         V +I E C  G+L +   R    +   E G    +R
Sbjct: 93  KIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELR 152
Query: 150 -------QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVV 202
                  Q+A+G+A L   N +HRD+   N L  N       KI DFGL+  +   D   
Sbjct: 153 DLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHV---AKIGDFGLAR-DIMNDSNY 208
Query: 203 GLFGS----IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIM 257
            + G+    + +++PE++     T +SD+WS G++L+ + S G  P+       K   ++
Sbjct: 209 IVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLV 268
Query: 258 AGEFSFYEQTW--KNISSSAKQLISSLLTVDPNRRPSAQEL 296
              +   +  +  KNI S    ++ +   ++P  RP+ Q++
Sbjct: 269 KDGYQMAQPAFAPKNIYS----IMQACWALEPTHRPTFQQI 305

>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438

Iteration: 1
 Score = 62.8 bits (151), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 73/152 (48%), Gaps = 15/152 (9%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAV--IRQIAEGLAAL 158
           H  ++ L+ V   +  +++I E  + G L D + + E   +     +    QIAEG+A +
Sbjct: 236 HDKLVKLHAVV-TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFI 294
Query: 159 HQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQ 218
            Q N +HRDL+  N L          KI DFGL+         VG    I + +PEA+  
Sbjct: 295 EQRNYIHRDLRAANILV---SASLVCKIADFGLAR--------VGAKFPIKWTAPEAINF 343
Query: 219 DRITSKSDMWSLGVILY-ILLSGYPPFIAQSN 249
              T KSD+WS G++L  I+  G  P+   SN
Sbjct: 344 GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN 375

>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex With Its Regulatory Subunit Kchip1 (Casp Target) Length = 180

Iteration: 1
 Score = 62.8 bits (151), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 350 LKNLLGSHDLNEEEIQNLRIHFRTICANG--DNATLSE-FEEVLKAMNMSSLVPLAPRIF 406
           L+ L    +  + E+Q L   F+  C +G  +  T  + + +     + S+    A  +F
Sbjct: 3   LEQLEAQTNFTKRELQVLYRGFKNECPSGVVNEDTFKQIYAQFFPHGDASTY---AHYLF 59
Query: 407 DLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALP 466
           + FD  + G+V   + +   S L +    + LR  F +YDI++ G I KEE+  +++A+ 
Sbjct: 60  NAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIY 119
Query: 467 D----DCLPV--DITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQ 505
           D       PV  + T    +D  F  MD N DG VT DEF  + Q
Sbjct: 120 DMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQ 164

>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329

Iteration: 1
 Score = 62.8 bits (151), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 56/221 (25%), Positives = 102/221 (46%), Gaps = 25/221 (11%)
Query: 93  KIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFD---RIVAQERYMEVGAAAVIR 149
           KI+ ++  H N+++L         V +I E C  G+L +   R    +   E G    +R
Sbjct: 101 KIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELR 160
Query: 150 -------QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVV 202
                  Q+A+G+A L   N +HRD+   N L  N       KI DFGL+  +   D   
Sbjct: 161 DLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGH---VAKIGDFGLAR-DIMNDSNY 216
Query: 203 GLFGS----IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIM 257
            + G+    + +++PE++     T +SD+WS G++L+ + S G  P+       K   ++
Sbjct: 217 IVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLV 276
Query: 258 AGEFSFYEQTW--KNISSSAKQLISSLLTVDPNRRPSAQEL 296
              +   +  +  KNI S    ++ +   ++P  RP+ Q++
Sbjct: 277 KDGYQMAQPAFAPKNIYS----IMQACWALEPTHRPTFQQI 313

>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX Length = 180

Iteration: 1
 Score = 62.8 bits (151), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 350 LKNLLGSHDLNEEEIQNLRIHFRTICANG--DNATLSE-FEEVLKAMNMSSLVPLAPRIF 406
           L+ L    +  + E+Q L   F+  C +G  +  T  + + +     + S+    A  +F
Sbjct: 3   LEQLEAQTNFTKRELQVLYRGFKNECPSGVVNEDTFKQIYAQFFPHGDASTY---AHYLF 59
Query: 407 DLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALP 466
           + FD  + G+V   + +   S L +    + LR  F +YDI++ G I KEE+  +++A+ 
Sbjct: 60  NAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIY 119
Query: 467 D----DCLPV--DITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQ 505
           D       PV  + T    +D  F  MD N DG VT DEF  + Q
Sbjct: 120 DMMGAYTYPVLAEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQ 164

>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350

Iteration: 1
 Score = 62.4 bits (150), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 98/247 (39%), Gaps = 51/247 (20%)
Query: 12  YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFF 71
           Y  T ++G G F VV +   K C     VAIK                            
Sbjct: 22  YTDTKVIGNGSFGVVYQA--KLCDSGELVAIK---------------------------- 51
Query: 72  PTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDL----YDVYEDQNGVHLILELCSGG 127
               +V    A    E+ +MRK+      H N++ L    Y   E ++ V+L L L    
Sbjct: 52  ----KVLQGKAFKNRELQIMRKL-----DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP 102
Query: 128 ELFDRIV-----AQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDS 182
           E   R+      A++    +     + Q+   LA +H   I HRD+KP+N L   D + +
Sbjct: 103 ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTA 160
Query: 183 PLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALL-QDRITSKSDMWSLGVILYILLSGY 241
            LK+ DFG +      +P V    S  Y +PE +      TS  D+WS G +L  LL G 
Sbjct: 161 VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
Query: 242 PPFIAQS 248
           P F   S
Sbjct: 221 PIFPGDS 227

>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis SerineTHREONINE Kinase, Pkne Length = 309

Iteration: 1
 Score = 62.4 bits (150), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 75/147 (51%), Gaps = 9/147 (6%)
Query: 102 PNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQA 161
           P+V+ ++D  E    +++   L +G +L   +  Q       A A++RQI   L A H A
Sbjct: 94  PHVVPIHDFGEIDGQLYVDXRLINGVDLAAXLRRQGPLAPPRAVAIVRQIGSALDAAHAA 153
Query: 162 NIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVV----GLFGSIDYVSPEALL 217
              HRD+KPEN L      D    ++DFG++S    TD  +       G++ Y +PE   
Sbjct: 154 GATHRDVKPENILV---SADDFAYLVDFGIASAT--TDEKLTQLGNTVGTLYYXAPERFS 208
Query: 218 QDRITSKSDMWSLGVILYILLSGYPPF 244
           +   T ++D+++L  +LY  L+G PP+
Sbjct: 209 ESHATYRADIYALTCVLYECLTGSPPY 235

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 62.4 bits (150), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 78/163 (47%), Gaps = 20/163 (12%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRI---------VAQERYMEVGAAAVIRQI 151
           HP+++ L    +++N + LI +    G L   +         ++ E+ +E+   A     
Sbjct: 94  HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGA----- 148
Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPV---VGLFGSI 208
           A GL  LH   I+HRD+K  N L   D    P KI DFG+S      D       + G++
Sbjct: 149 ARGLHYLHTRAIIHRDVKSINILL--DENFVP-KITDFGISKKGTELDQTHLXXVVKGTL 205
Query: 209 DYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQ 251
            Y+ PE  ++ R+T KSD++S GV+L+ +L      +    R+
Sbjct: 206 GYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPRE 248

>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317

Iteration: 1
 Score = 62.0 bits (149), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 63/238 (26%), Positives = 105/238 (44%), Gaps = 44/238 (18%)
Query: 16  DILGRGGFSVVRRG-IKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFFPTR 74
           +++GRG F  V  G +    G+    A+K+L RI                          
Sbjct: 37  EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-------------------------- 70
Query: 75  KQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLI-LELCSGGELFDRI 133
                +D    ++ L    I+++ S HPNV+ L  +     G  L+ L     G+L + I
Sbjct: 71  -----TDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI 124
Query: 134 VAQERYMEVG-AAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS 192
             +     V        Q+A+G+  L     VHRDL   NC+     E   +K+ DFGL+
Sbjct: 125 RNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCML---DEKFTVKVADFGLA 181
Query: 193 S--VEGYTDPVVGLFGS---IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPF 244
              ++   D V    G+   + +++ E+L   + T+KSD+WS GV+L+ L++ G PP+
Sbjct: 182 RDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 239

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 62.0 bits (149), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 51/160 (31%), Positives = 77/160 (48%), Gaps = 21/160 (13%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE-------RYMEVGAAAVIRQIAE 153
           H  ++ L+ V   +  +++I E  + G L D + + E       + ++  A     QIAE
Sbjct: 69  HDKLVKLHAVV-TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSA-----QIAE 122
Query: 154 GLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV---EGYTDPVVGLFGSIDY 210
           G+A + Q N +HRDL+  N L          KI DFGL+ V     YT      F  I +
Sbjct: 123 GMAFIEQRNYIHRDLRAANILV---SASLVCKIADFGLARVIEDNEYTAREGAKF-PIKW 178
Query: 211 VSPEALLQDRITSKSDMWSLGVILY-ILLSGYPPFIAQSN 249
            +PEA+     T KSD+WS G++L  I+  G  P+   SN
Sbjct: 179 TAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN 218

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 62.0 bits (149), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 75/268 (27%), Positives = 117/268 (43%), Gaps = 65/268 (24%)
Query: 10  DEYEV-------TDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXX 62
           DE+EV        + LG G F  V  G     G T +VA+K+L++ GS +P         
Sbjct: 6   DEWEVPRETLKLVERLGAGQFGEVWMGYYN--GHT-KVAVKSLKQ-GSMSP--------- 52
Query: 63  XXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILE 122
                             DA L  E  +M+++      H  ++ LY V   Q  +++I E
Sbjct: 53  ------------------DAFLA-EANLMKQL-----QHQRLVRLYAVV-TQEPIYIITE 87
Query: 123 LCSGGELFDRI-------VAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLF 175
               G L D +       +   + +++ A     QIAEG+A + + N +HRDL+  N L 
Sbjct: 88  YMENGSLVDFLKTPSGIKLTINKLLDMAA-----QIAEGMAFIEERNYIHRDLRAANILV 142
Query: 176 LNDREDSPLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGV 232
               +    KI DFGL+ +     YT      F  I + +PEA+     T KSD+WS G+
Sbjct: 143 ---SDTLSCKIADFGLARLIEDNEYTAREGAKF-PIKWTAPEAINYGTFTIKSDVWSFGI 198
Query: 233 ILY-ILLSGYPPFIAQSNRQKQQMIMAG 259
           +L  I+  G  P+   +N +  Q +  G
Sbjct: 199 LLTEIVTHGRIPYPGMTNPEVIQNLERG 226

>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16 In Complex With Staurosporine Length = 317

Iteration: 1
 Score = 62.0 bits (149), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 101/223 (45%), Gaps = 33/223 (14%)
Query: 101 HPNVIDLYDVYEDQNGVH----LILELCSGGELFDRIVAQERYMEVG-------AAAVIR 149
           HPN++ L      + G      L+L     G L++ I   ER  + G          ++ 
Sbjct: 85  HPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEI---ERLKDKGNFLTEDQILWLLL 141
Query: 150 QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFG-----LSSVEGYTDPVV-- 202
            I  GL A+H     HRDLKP N L L D E  P+ +MD G        VEG    +   
Sbjct: 142 GICRGLEAIHAKGYAHRDLKPTNIL-LGD-EGQPV-LMDLGSMNQACIHVEGSRQALTLQ 198
Query: 203 ---GLFGSIDYVSPEAL-LQDR--ITSKSDMWSLGVILYILLSGYPPF-IAQSNRQKQQM 255
                  +I Y +PE   +Q    I  ++D+WSLG +LY ++ G  P+ +         +
Sbjct: 199 DWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVAL 258
Query: 256 IMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN 298
            +  + S  +      SS+  QL++S++TVDP++RP    LL+
Sbjct: 259 AVQNQLSIPQSP--RHSSALWQLLNSMMTVDPHQRPHIPLLLS 299

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 62.0 bits (149), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 75/268 (27%), Positives = 117/268 (43%), Gaps = 65/268 (24%)
Query: 10  DEYEV-------TDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXX 62
           DE+EV        + LG G F  V  G     G T +VA+K+L++ GS +P         
Sbjct: 11  DEWEVPRETLKLVERLGAGQFGEVWMGYYN--GHT-KVAVKSLKQ-GSMSP--------- 57
Query: 63  XXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILE 122
                             DA L  E  +M+++      H  ++ LY V   Q  +++I E
Sbjct: 58  ------------------DAFLA-EANLMKQL-----QHQRLVRLYAVV-TQEPIYIITE 92
Query: 123 LCSGGELFDRI-------VAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLF 175
               G L D +       +   + +++ A     QIAEG+A + + N +HRDL+  N L 
Sbjct: 93  YMENGSLVDFLKTPSGIKLTINKLLDMAA-----QIAEGMAFIEERNYIHRDLRAANILV 147
Query: 176 LNDREDSPLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGV 232
               +    KI DFGL+ +     YT      F  I + +PEA+     T KSD+WS G+
Sbjct: 148 ---SDTLSCKIADFGLARLIEDNEYTAREGAKF-PIKWTAPEAINYGTFTIKSDVWSFGI 203
Query: 233 ILY-ILLSGYPPFIAQSNRQKQQMIMAG 259
           +L  I+  G  P+   +N +  Q +  G
Sbjct: 204 LLTEIVTHGRIPYPGMTNPEVIQNLERG 231

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 62.0 bits (149), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 92/196 (46%), Gaps = 26/196 (13%)
Query: 75  KQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRI- 133
           KQ S+S      E  +M+++      H  ++ LY V   Q  +++I E    G L D + 
Sbjct: 41  KQGSMSPDAFLAEANLMKQL-----QHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLK 94
Query: 134 ------VAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIM 187
                 +   + +++ A     QIAEG+A + + N +HRDL+  N L     +    KI 
Sbjct: 95  TPSGIKLTINKLLDMAA-----QIAEGMAFIEERNYIHRDLRAANILV---SDTLSCKIA 146
Query: 188 DFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILLSGYPP 243
           DFGL+ +     YT      F  I + +PEA+     T KSD+WS G++L  I+  G  P
Sbjct: 147 DFGLARLIEDNEYTAREGAKF-PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 205
Query: 244 FIAQSNRQKQQMIMAG 259
           +   +N +  Q +  G
Sbjct: 206 YPGMTNPEVIQNLERG 221

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 62.0 bits (149), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 75/268 (27%), Positives = 117/268 (43%), Gaps = 65/268 (24%)
Query: 10  DEYEV-------TDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXX 62
           DE+EV        + LG G F  V  G     G T +VA+K+L++ GS +P         
Sbjct: 12  DEWEVPRETLKLVERLGAGQFGEVWMGYYN--GHT-KVAVKSLKQ-GSMSP--------- 58
Query: 63  XXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILE 122
                             DA L  E  +M+++      H  ++ LY V   Q  +++I E
Sbjct: 59  ------------------DAFLA-EANLMKQL-----QHQRLVRLYAVV-TQEPIYIITE 93
Query: 123 LCSGGELFDRI-------VAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLF 175
               G L D +       +   + +++ A     QIAEG+A + + N +HRDL+  N L 
Sbjct: 94  YMENGSLVDFLKTPSGIKLTINKLLDMAA-----QIAEGMAFIEERNYIHRDLRAANILV 148
Query: 176 LNDREDSPLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGV 232
               +    KI DFGL+ +     YT      F  I + +PEA+     T KSD+WS G+
Sbjct: 149 ---SDTLSCKIADFGLARLIEDNEYTAREGAKF-PIKWTAPEAINYGTFTIKSDVWSFGI 204
Query: 233 ILY-ILLSGYPPFIAQSNRQKQQMIMAG 259
           +L  I+  G  P+   +N +  Q +  G
Sbjct: 205 LLTEIVTHGRIPYPGMTNPEVIQNLERG 232

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 61.6 bits (148), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 98/219 (44%), Gaps = 17/219 (7%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAV--IRQIAEGLAAL 158
           H  ++ L+ V   +  +++I E  + G L D + + E   +     +    QIAEG+A +
Sbjct: 242 HDKLVKLHAVV-TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFI 300
Query: 159 HQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEA 215
            Q N +HRDL+  N L          KI DFGL+ V     YT      F  I + +PEA
Sbjct: 301 EQRNYIHRDLRAANILV---SASLVCKIADFGLARVIEDNEYTAREGAKF-PIKWTAPEA 356
Query: 216 LLQDRITSKSDMWSLGVILY-ILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSS 274
           +     T KSD+WS G++L  I+  G  P+   SN    ++I A E  +     +N    
Sbjct: 357 INFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN---PEVIRALERGYRMPRPENCPEE 413
Query: 275 AKQLISSLLTVDPNRRPS---AQELLNHPWVIGDSAKEE 310
              ++       P  RP+    Q +L+  +   +S  EE
Sbjct: 414 LYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATESQXEE 452

>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302

Iteration: 1
 Score = 61.6 bits (148), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 52/226 (23%), Positives = 99/226 (43%), Gaps = 28/226 (12%)
Query: 93  KIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA----------------Q 136
           ++++ +  H N+I+L         +++I+E  S G L + + A                +
Sbjct: 70  EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPE 129
Query: 137 ERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS---- 192
           E+       +   Q+A G+  L     +HRDL   N L     ED+ +KI DFGL+    
Sbjct: 130 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIADFGLARDIH 186
Query: 193 SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILLSGYPPFIAQSNRQ 251
            ++ Y     G    + +++PEAL     T +SD+WS GV+L+ I   G  P+      +
Sbjct: 187 HIDYYKKTTNGRL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 245
Query: 252 KQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELL 297
             +++  G          N ++    ++       P++RP+ ++L+
Sbjct: 246 LFKLLKEGHRM---DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 288

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 61.6 bits (148), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 74/148 (50%), Gaps = 10/148 (6%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVG---AAAVIRQIAEGLAA 157
           H N+++L     D + + L+      G L DR+   +    +       + +  A G+  
Sbjct: 80  HENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINF 139
Query: 158 LHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS-SVEGYTDPVVG--LFGSIDYVSPE 214
           LH+ + +HRD+K  N L     E    KI DFGL+ + E +   V    + G+  Y +PE
Sbjct: 140 LHENHHIHRDIKSANILL---DEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPE 196
Query: 215 ALLQDRITSKSDMWSLGVILYILLSGYP 242
           AL +  IT KSD++S GV+L  +++G P
Sbjct: 197 AL-RGEITPKSDIYSFGVVLLEIITGLP 223

>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317

Iteration: 1
 Score = 61.6 bits (148), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 52/226 (23%), Positives = 99/226 (43%), Gaps = 28/226 (12%)
Query: 93  KIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA----------------Q 136
           ++++ +  H N+I+L         +++I+E  S G L + + A                +
Sbjct: 85  EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE 144
Query: 137 ERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS---- 192
           E+       +   Q+A G+  L     +HRDL   N L     ED+ +KI DFGL+    
Sbjct: 145 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIADFGLARDIH 201
Query: 193 SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILLSGYPPFIAQSNRQ 251
            ++ Y     G    + +++PEAL     T +SD+WS GV+L+ I   G  P+      +
Sbjct: 202 HIDYYKKTTNGRL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 260
Query: 252 KQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELL 297
             +++  G          N ++    ++       P++RP+ ++L+
Sbjct: 261 LFKLLKEGHRM---DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 303

>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324

Iteration: 1
 Score = 61.6 bits (148), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 56/224 (25%), Positives = 96/224 (42%), Gaps = 27/224 (12%)
Query: 93  KIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQ-- 150
           +++  +  HPN+I+L    E +  ++L +E    G L D  + + R +E   A  I    
Sbjct: 74  EVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLD-FLRKSRVLETDPAFAIANST 132
Query: 151 ---------------IAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS-SV 194
                          +A G+  L Q   +HR+L   N L     E+   KI DFGLS   
Sbjct: 133 ASTLSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILV---GENYVAKIADFGLSRGQ 189
Query: 195 EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQ 253
           E Y    +G    + +++ E+L     T+ SD+WS GV+L+ ++S G  P+   +  +  
Sbjct: 190 EVYVKKTMGRL-PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY 248
Query: 254 QMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELL 297
           + +  G   +  +   N       L+       P  RPS  ++L
Sbjct: 249 EKLPQG---YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 289

>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/226 (23%), Positives = 99/226 (43%), Gaps = 28/226 (12%)
Query: 93  KIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA----------------Q 136
           ++++ +  H N+I+L         +++I+E  S G L + + A                +
Sbjct: 85  EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPE 144
Query: 137 ERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS---- 192
           E+       +   Q+A G+  L     +HRDL   N L     ED+ +KI DFGL+    
Sbjct: 145 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIH 201
Query: 193 SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILLSGYPPFIAQSNRQ 251
            ++ Y     G    + +++PEAL     T +SD+WS GV+L+ I   G  P+      +
Sbjct: 202 HIDYYKKTTNGRL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 260
Query: 252 KQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELL 297
             +++  G          N ++    ++       P++RP+ ++L+
Sbjct: 261 LFKLLKEGHRM---DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 303

>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/226 (23%), Positives = 99/226 (43%), Gaps = 28/226 (12%)
Query: 93  KIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA----------------Q 136
           ++++ +  H N+I+L         +++I+E  S G L + + A                +
Sbjct: 126 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE 185
Query: 137 ERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS---- 192
           E+       +   Q+A G+  L     +HRDL   N L     ED+ +KI DFGL+    
Sbjct: 186 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIH 242
Query: 193 SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILLSGYPPFIAQSNRQ 251
            ++ Y     G    + +++PEAL     T +SD+WS GV+L+ I   G  P+      +
Sbjct: 243 HIDYYKKTTNGRL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 301
Query: 252 KQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELL 297
             +++  G          N ++    ++       P++RP+ ++L+
Sbjct: 302 LFKLLKEGHRM---DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 344

>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/226 (23%), Positives = 99/226 (43%), Gaps = 28/226 (12%)
Query: 93  KIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA----------------Q 136
           ++++ +  H N+I+L         +++I+E  S G L + + A                +
Sbjct: 77  EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE 136
Query: 137 ERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS---- 192
           E+       +   Q+A G+  L     +HRDL   N L     ED+ +KI DFGL+    
Sbjct: 137 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIADFGLARDIH 193
Query: 193 SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILLSGYPPFIAQSNRQ 251
            ++ Y     G    + +++PEAL     T +SD+WS GV+L+ I   G  P+      +
Sbjct: 194 HIDYYKKTTNGRL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 252
Query: 252 KQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELL 297
             +++  G          N ++    ++       P++RP+ ++L+
Sbjct: 253 LFKLLKEGHRM---DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 295

>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 103/242 (42%), Gaps = 52/242 (21%)
Query: 16  DILGRGGFSVVRRG-IKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFFPTR 74
           +++GRG F  V  G +    G+    A+K+L RI                          
Sbjct: 35  EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-------------------------- 68
Query: 75  KQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLI-LELCSGGELFDRI 133
                +D    ++ L    I+++ S HPNV+ L  +     G  L+ L     G+L + I
Sbjct: 69  -----TDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI 122
Query: 134 VAQERYMEVG-AAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS 192
             +     V        Q+A+G+  L     VHRDL   NC+     E   +K+ DFGL+
Sbjct: 123 RNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCML---DEKFTVKVADFGLA 179
Query: 193 ---------SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYP 242
                    SV   T    G    + +++ E+L   + T+KSD+WS GV+L+ L++ G P
Sbjct: 180 RDMYDKEXXSVHNKT----GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
Query: 243 PF 244
           P+
Sbjct: 236 PY 237

>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/226 (23%), Positives = 99/226 (43%), Gaps = 28/226 (12%)
Query: 93  KIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA----------------Q 136
           ++++ +  H N+I+L         +++I+E  S G L + + A                +
Sbjct: 74  EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE 133
Query: 137 ERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS---- 192
           E+       +   Q+A G+  L     +HRDL   N L     ED+ +KI DFGL+    
Sbjct: 134 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIADFGLARDIH 190
Query: 193 SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILLSGYPPFIAQSNRQ 251
            ++ Y     G    + +++PEAL     T +SD+WS GV+L+ I   G  P+      +
Sbjct: 191 HIDYYKKTTNGRL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 249
Query: 252 KQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELL 297
             +++  G          N ++    ++       P++RP+ ++L+
Sbjct: 250 LFKLLKEGHRM---DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 292

>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/226 (23%), Positives = 99/226 (43%), Gaps = 28/226 (12%)
Query: 93  KIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA----------------Q 136
           ++++ +  H N+I+L         +++I+E  S G L + + A                +
Sbjct: 78  EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE 137
Query: 137 ERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS---- 192
           E+       +   Q+A G+  L     +HRDL   N L     ED+ +KI DFGL+    
Sbjct: 138 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIADFGLARDIH 194
Query: 193 SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILLSGYPPFIAQSNRQ 251
            ++ Y     G    + +++PEAL     T +SD+WS GV+L+ I   G  P+      +
Sbjct: 195 HIDYYKKTTNGRL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 253
Query: 252 KQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELL 297
             +++  G          N ++    ++       P++RP+ ++L+
Sbjct: 254 LFKLLKEGHRM---DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 296

>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase Length = 202

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 10/160 (6%)
Query: 350 LKNLLGSHDLNEEEIQNLRIHFRTICANGDNATLSEFEEVL-KAMNMSSLVPLAPRIFDL 408
           L+ L  +    EEE+ +    F   C +G   T  EF+ +  K    +     A  +F  
Sbjct: 14  LEELQLNTKFTEEELSSWYQSFLKECPSG-RITRQEFQTIYSKFFPEADPKAYAQHVFRS 72
Query: 409 FDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRAL--- 465
           FD N DGT+D +E +         + +  L   F +YD+D +G I+K EV  ++ A+   
Sbjct: 73  FDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKM 132
Query: 466 --PDDC--LPVDITEPGK-LDEIFDLMDANNDGKVTFDEF 500
             P+D   LP D   P K  ++I+      +D K+T  EF
Sbjct: 133 ISPEDTKHLPEDENTPEKRAEKIWGFFGKKDDDKLTEKEF 172

>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/226 (23%), Positives = 99/226 (43%), Gaps = 28/226 (12%)
Query: 93  KIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA----------------Q 136
           ++++ +  H N+I+L         +++I+E  S G L + + A                +
Sbjct: 85  EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPE 144
Query: 137 ERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS---- 192
           E+       +   Q+A G+  L     +HRDL   N L     ED+ +KI DFGL+    
Sbjct: 145 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIH 201
Query: 193 SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILLSGYPPFIAQSNRQ 251
            ++ Y     G    + +++PEAL     T +SD+WS GV+L+ I   G  P+      +
Sbjct: 202 HIDYYKKTTNGRL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 260
Query: 252 KQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELL 297
             +++  G          N ++    ++       P++RP+ ++L+
Sbjct: 261 LFKLLKEGHRM---DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 303

>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/238 (26%), Positives = 104/238 (43%), Gaps = 44/238 (18%)
Query: 16  DILGRGGFSVVRRG-IKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFFPTR 74
           +++GRG F  V  G +    G+    A+K+L RI                          
Sbjct: 34  EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-------------------------- 67
Query: 75  KQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLI-LELCSGGELFDRI 133
                +D    ++ L    I+++ S HPNV+ L  +     G  L+ L     G+L + I
Sbjct: 68  -----TDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI 121
Query: 134 VAQERYMEVG-AAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS 192
             +     V        Q+A+G+  L     VHRDL   NC+     E   +K+ DFGL+
Sbjct: 122 RNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCML---DEKFTVKVADFGLA 178
Query: 193 S--VEGYTDPVVGLFGS---IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPF 244
               +   D V    G+   + +++ E+L   + T+KSD+WS GV+L+ L++ G PP+
Sbjct: 179 RDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 236

>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With Calcium Bound To Ef- Hand 3 Length = 201

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 10/160 (6%)
Query: 350 LKNLLGSHDLNEEEIQNLRIHFRTICANGDNATLSEFEEVL-KAMNMSSLVPLAPRIFDL 408
           L+ L  +    EEE+ +    F   C +G   T  EF+ +  K    +     A  +F  
Sbjct: 13  LEELQLNTKFTEEELSSWYQSFLKECPSG-RITRQEFQTIYSKFFPEADPKAYAQHVFRS 71
Query: 409 FDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRAL--- 465
           FD N DGT+D +E +         + +  L   F +YD+D +G I+K EV  ++ A+   
Sbjct: 72  FDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKM 131
Query: 466 --PDDC--LPVDITEPGK-LDEIFDLMDANNDGKVTFDEF 500
             P+D   LP D   P K  ++I+      +D K+T  EF
Sbjct: 132 ISPEDTKHLPEDENTPEKRAEKIWGFFGKKDDDKLTEKEF 171

>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 103/242 (42%), Gaps = 52/242 (21%)
Query: 16  DILGRGGFSVVRRG-IKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFFPTR 74
           +++GRG F  V  G +    G+    A+K+L RI                          
Sbjct: 36  EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-------------------------- 69
Query: 75  KQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLI-LELCSGGELFDRI 133
                +D    ++ L    I+++ S HPNV+ L  +     G  L+ L     G+L + I
Sbjct: 70  -----TDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI 123
Query: 134 VAQERYMEVG-AAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS 192
             +     V        Q+A+G+  L     VHRDL   NC+     E   +K+ DFGL+
Sbjct: 124 RNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCML---DEKFTVKVADFGLA 180
Query: 193 ---------SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYP 242
                    SV   T    G    + +++ E+L   + T+KSD+WS GV+L+ L++ G P
Sbjct: 181 RDMYDKEYYSVHNKT----GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
Query: 243 PF 244
           P+
Sbjct: 237 PY 238

>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24 Structures Length = 201

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 10/160 (6%)
Query: 350 LKNLLGSHDLNEEEIQNLRIHFRTICANGDNATLSEFEEVL-KAMNMSSLVPLAPRIFDL 408
           L+ L  +    EEE+ +    F   C +G   T  EF+ +  K    +     A  +F  
Sbjct: 13  LEELQLNTKFTEEELSSWYQSFLKECPSG-RITRQEFQTIYSKFFPEADPKAYAQHVFRS 71
Query: 409 FDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRAL--- 465
           FD N DGT+D +E +         + +  L   F +YD+D +G I+K EV  ++ A+   
Sbjct: 72  FDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKM 131
Query: 466 --PDDC--LPVDITEPGK-LDEIFDLMDANNDGKVTFDEF 500
             P+D   LP D   P K  ++I+      +D K+T  EF
Sbjct: 132 ISPEDTKHLPEDENTPEKRAEKIWGFFGKKDDDKLTEKEF 171

>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/238 (26%), Positives = 104/238 (43%), Gaps = 44/238 (18%)
Query: 16  DILGRGGFSVVRRG-IKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFFPTR 74
           +++GRG F  V  G +    G+    A+K+L RI                          
Sbjct: 36  EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-------------------------- 69
Query: 75  KQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLI-LELCSGGELFDRI 133
                +D    ++ L    I+++ S HPNV+ L  +     G  L+ L     G+L + I
Sbjct: 70  -----TDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI 123
Query: 134 VAQERYMEVG-AAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS 192
             +     V        Q+A+G+  L     VHRDL   NC+     E   +K+ DFGL+
Sbjct: 124 RNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCML---DEKFTVKVADFGLA 180
Query: 193 S--VEGYTDPVVGLFGS---IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPF 244
               +   D V    G+   + +++ E+L   + T+KSD+WS GV+L+ L++ G PP+
Sbjct: 181 RDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 238

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 75/268 (27%), Positives = 117/268 (43%), Gaps = 65/268 (24%)
Query: 10  DEYEV-------TDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXX 62
           DE+EV        + LG G F  V  G     G T +VA+K+L++ GS +P         
Sbjct: 16  DEWEVPRETLKLVERLGAGQFGEVWMGYYN--GHT-KVAVKSLKQ-GSMSP--------- 62
Query: 63  XXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILE 122
                             DA L  E  +M+++      H  ++ LY V   Q  +++I E
Sbjct: 63  ------------------DAFLA-EANLMKQLQ-----HQRLVRLYAVV-TQEPIYIITE 97
Query: 123 LCSGGELFDRI-------VAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLF 175
               G L D +       +   + +++ A     QIAEG+A + + N +HRDL+  N L 
Sbjct: 98  YMENGSLVDFLKTPSGIKLTINKLLDMAA-----QIAEGMAFIEERNYIHRDLRAANILV 152
Query: 176 LNDREDSPLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGV 232
               +    KI DFGL+ +     YT      F  I + +PEA+     T KSD+WS G+
Sbjct: 153 ---SDTLSCKIADFGLARLIEDNEYTAREGAKF-PIKWTAPEAINYGTFTIKSDVWSFGI 208
Query: 233 ILY-ILLSGYPPFIAQSNRQKQQMIMAG 259
           +L  I+  G  P+   +N +  Q +  G
Sbjct: 209 LLTEIVTHGRIPYPGMTNPEVIQNLERG 236

>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/238 (26%), Positives = 104/238 (43%), Gaps = 44/238 (18%)
Query: 16  DILGRGGFSVVRRG-IKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFFPTR 74
           +++GRG F  V  G +    G+    A+K+L RI                          
Sbjct: 37  EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-------------------------- 70
Query: 75  KQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLI-LELCSGGELFDRI 133
                +D    ++ L    I+++ S HPNV+ L  +     G  L+ L     G+L + I
Sbjct: 71  -----TDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI 124
Query: 134 VAQERYMEVG-AAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS 192
             +     V        Q+A+G+  L     VHRDL   NC+     E   +K+ DFGL+
Sbjct: 125 RNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCML---DEKFTVKVADFGLA 181
Query: 193 S--VEGYTDPVVGLFGS---IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPF 244
               +   D V    G+   + +++ E+L   + T+KSD+WS GV+L+ L++ G PP+
Sbjct: 182 RDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 239

>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 103/242 (42%), Gaps = 52/242 (21%)
Query: 16  DILGRGGFSVVRRG-IKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFFPTR 74
           +++GRG F  V  G +    G+    A+K+L RI                          
Sbjct: 54  EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-------------------------- 87
Query: 75  KQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLI-LELCSGGELFDRI 133
                +D    ++ L    I+++ S HPNV+ L  +     G  L+ L     G+L + I
Sbjct: 88  -----TDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI 141
Query: 134 VAQERYMEVG-AAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS 192
             +     V        Q+A+G+  L     VHRDL   NC+     E   +K+ DFGL+
Sbjct: 142 RNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCML---DEKFTVKVADFGLA 198
Query: 193 ---------SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYP 242
                    SV   T    G    + +++ E+L   + T+KSD+WS GV+L+ L++ G P
Sbjct: 199 RDMYDKEYYSVHNKT----GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 254
Query: 243 PF 244
           P+
Sbjct: 255 PY 256

>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 103/242 (42%), Gaps = 52/242 (21%)
Query: 16  DILGRGGFSVVRRG-IKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFFPTR 74
           +++GRG F  V  G +    G+    A+K+L RI                          
Sbjct: 28  EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-------------------------- 61
Query: 75  KQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLI-LELCSGGELFDRI 133
                +D    ++ L    I+++ S HPNV+ L  +     G  L+ L     G+L + I
Sbjct: 62  -----TDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI 115
Query: 134 VAQERYMEVG-AAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS 192
             +     V        Q+A+G+  L     VHRDL   NC+     E   +K+ DFGL+
Sbjct: 116 RNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCML---DEKFTVKVADFGLA 172
Query: 193 ---------SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYP 242
                    SV   T    G    + +++ E+L   + T+KSD+WS GV+L+ L++ G P
Sbjct: 173 RDMYDKEYYSVHNKT----GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 228
Query: 243 PF 244
           P+
Sbjct: 229 PY 230

>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/238 (26%), Positives = 104/238 (43%), Gaps = 44/238 (18%)
Query: 16  DILGRGGFSVVRRG-IKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFFPTR 74
           +++GRG F  V  G +    G+    A+K+L RI                          
Sbjct: 36  EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-------------------------- 69
Query: 75  KQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLI-LELCSGGELFDRI 133
                +D    ++ L    I+++ S HPNV+ L  +     G  L+ L     G+L + I
Sbjct: 70  -----TDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI 123
Query: 134 VAQERYMEVG-AAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS 192
             +     V        Q+A+G+  L     VHRDL   NC+     E   +K+ DFGL+
Sbjct: 124 RNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCML---DEKFTVKVADFGLA 180
Query: 193 S--VEGYTDPVVGLFGS---IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPF 244
               +   D V    G+   + +++ E+L   + T+KSD+WS GV+L+ L++ G PP+
Sbjct: 181 RDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 238

>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/238 (26%), Positives = 104/238 (43%), Gaps = 44/238 (18%)
Query: 16  DILGRGGFSVVRRG-IKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFFPTR 74
           +++GRG F  V  G +    G+    A+K+L RI                          
Sbjct: 41  EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-------------------------- 74
Query: 75  KQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLI-LELCSGGELFDRI 133
                +D    ++ L    I+++ S HPNV+ L  +     G  L+ L     G+L + I
Sbjct: 75  -----TDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI 128
Query: 134 VAQERYMEVG-AAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS 192
             +     V        Q+A+G+  L     VHRDL   NC+     E   +K+ DFGL+
Sbjct: 129 RNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCML---DEKFTVKVADFGLA 185
Query: 193 S--VEGYTDPVVGLFGS---IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPF 244
               +   D V    G+   + +++ E+L   + T+KSD+WS GV+L+ L++ G PP+
Sbjct: 186 RDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 243

>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At C-Terminus) With Calcium Bound To Ef-Hand 3 Length = 189

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 10/160 (6%)
Query: 350 LKNLLGSHDLNEEEIQNLRIHFRTICANGDNATLSEFEEVL-KAMNMSSLVPLAPRIFDL 408
           L+ L  +    EEE+ +    F   C +G   T  EF+ +  K    +     A  +F  
Sbjct: 13  LEELQLNTKFTEEELSSWYQSFLKECPSG-RITRQEFQTIYSKFFPEADPKAYAQHVFRS 71
Query: 409 FDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRAL--- 465
           FD N DGT+D +E +         + +  L   F +YD+D +G I+K EV  ++ A+   
Sbjct: 72  FDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKM 131
Query: 466 --PDDC--LPVDITEPGK-LDEIFDLMDANNDGKVTFDEF 500
             P+D   LP D   P K  ++I+      +D K+T  EF
Sbjct: 132 ISPEDTKHLPEDENTPEKRAEKIWGFFGKKDDDKLTEKEF 171

>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 103/242 (42%), Gaps = 52/242 (21%)
Query: 16  DILGRGGFSVVRRG-IKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFFPTR 74
           +++GRG F  V  G +    G+    A+K+L RI                          
Sbjct: 55  EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-------------------------- 88
Query: 75  KQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLI-LELCSGGELFDRI 133
                +D    ++ L    I+++ S HPNV+ L  +     G  L+ L     G+L + I
Sbjct: 89  -----TDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI 142
Query: 134 VAQERYMEVG-AAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS 192
             +     V        Q+A+G+  L     VHRDL   NC+     E   +K+ DFGL+
Sbjct: 143 RNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCML---DEKFTVKVADFGLA 199
Query: 193 ---------SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYP 242
                    SV   T    G    + +++ E+L   + T+KSD+WS GV+L+ L++ G P
Sbjct: 200 RDMYDKEYYSVHNKT----GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 255
Query: 243 PF 244
           P+
Sbjct: 256 PY 257

>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 103/242 (42%), Gaps = 52/242 (21%)
Query: 16  DILGRGGFSVVRRG-IKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFFPTR 74
           +++GRG F  V  G +    G+    A+K+L RI                          
Sbjct: 36  EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-------------------------- 69
Query: 75  KQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLI-LELCSGGELFDRI 133
                +D    ++ L    I+++ S HPNV+ L  +     G  L+ L     G+L + I
Sbjct: 70  -----TDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI 123
Query: 134 VAQERYMEVG-AAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS 192
             +     V        Q+A+G+  L     VHRDL   NC+     E   +K+ DFGL+
Sbjct: 124 RNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCML---DEKFTVKVADFGLA 180
Query: 193 ---------SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYP 242
                    SV   T    G    + +++ E+L   + T+KSD+WS GV+L+ L++ G P
Sbjct: 181 RDMYDKEYYSVHNKT----GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
Query: 243 PF 244
           P+
Sbjct: 237 PY 238

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 73/267 (27%), Positives = 116/267 (43%), Gaps = 63/267 (23%)
Query: 10  DEYEV-------TDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXX 62
           DE+EV        + LG G F  V  G     G T +VA+K+L++ GS +P         
Sbjct: 6   DEWEVPRETLKLVERLGAGQFGEVWMGYYN--GHT-KVAVKSLKQ-GSMSP--------- 52
Query: 63  XXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILE 122
                             DA L  E  +M+++      H  ++ LY V   Q  +++I E
Sbjct: 53  ------------------DAFLA-EANLMKQL-----QHQRLVRLYAVV-TQEPIYIITE 87
Query: 123 LCSGGELFDRI-------VAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLF 175
               G L D +       +   + +++ A     QIAEG+A + + N +HRDL+  N L 
Sbjct: 88  YMENGSLVDFLKTPSGIKLTINKLLDMAA-----QIAEGMAFIEERNYIHRDLRAANILV 142
Query: 176 LNDREDSPLKIMDFGLSSV--EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVI 233
               +    KI DFGL+ +  +       G    I + +PEA+     T KSD+WS G++
Sbjct: 143 ---SDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 199
Query: 234 LY-ILLSGYPPFIAQSNRQKQQMIMAG 259
           L  I+  G  P+   +N +  Q +  G
Sbjct: 200 LTEIVTHGRIPYPGMTNPEVIQNLERG 226

>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 103/242 (42%), Gaps = 52/242 (21%)
Query: 16  DILGRGGFSVVRRG-IKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFFPTR 74
           +++GRG F  V  G +    G+    A+K+L RI                          
Sbjct: 34  EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-------------------------- 67
Query: 75  KQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLI-LELCSGGELFDRI 133
                +D    ++ L    I+++ S HPNV+ L  +     G  L+ L     G+L + I
Sbjct: 68  -----TDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI 121
Query: 134 VAQERYMEVG-AAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS 192
             +     V        Q+A+G+  L     VHRDL   NC+     E   +K+ DFGL+
Sbjct: 122 RNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCML---DEKFTVKVADFGLA 178
Query: 193 ---------SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYP 242
                    SV   T    G    + +++ E+L   + T+KSD+WS GV+L+ L++ G P
Sbjct: 179 RDMYDKEYYSVHNKT----GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
Query: 243 PF 244
           P+
Sbjct: 235 PY 236

>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 103/242 (42%), Gaps = 52/242 (21%)
Query: 16  DILGRGGFSVVRRG-IKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFFPTR 74
           +++GRG F  V  G +    G+    A+K+L RI                          
Sbjct: 35  EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-------------------------- 68
Query: 75  KQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLI-LELCSGGELFDRI 133
                +D    ++ L    I+++ S HPNV+ L  +     G  L+ L     G+L + I
Sbjct: 69  -----TDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI 122
Query: 134 VAQERYMEVG-AAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS 192
             +     V        Q+A+G+  L     VHRDL   NC+     E   +K+ DFGL+
Sbjct: 123 RNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCML---DEKFTVKVADFGLA 179
Query: 193 ---------SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYP 242
                    SV   T    G    + +++ E+L   + T+KSD+WS GV+L+ L++ G P
Sbjct: 180 RDMYDKEYYSVHNKT----GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
Query: 243 PF 244
           P+
Sbjct: 236 PY 237

>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/238 (26%), Positives = 104/238 (43%), Gaps = 44/238 (18%)
Query: 16  DILGRGGFSVVRRG-IKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFFPTR 74
           +++GRG F  V  G +    G+    A+K+L RI                          
Sbjct: 95  EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-------------------------- 128
Query: 75  KQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLI-LELCSGGELFDRI 133
                +D    ++ L    I+++ S HPNV+ L  +     G  L+ L     G+L + I
Sbjct: 129 -----TDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI 182
Query: 134 VAQERYMEVG-AAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS 192
             +     V        Q+A+G+  L     VHRDL   NC+     E   +K+ DFGL+
Sbjct: 183 RNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCML---DEKFTVKVADFGLA 239
Query: 193 S--VEGYTDPVVGLFGS---IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPF 244
               +   D V    G+   + +++ E+L   + T+KSD+WS GV+L+ L++ G PP+
Sbjct: 240 RDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 297

>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 99/248 (39%), Gaps = 53/248 (21%)
Query: 12  YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFF 71
           Y  T ++G G F VV +   K C     VAIK +                          
Sbjct: 50  YTDTKVIGNGSFGVVYQA--KLCDSGELVAIKKV-------------------------- 81
Query: 72  PTRKQVSVSDALLTN-EILVMRKIVENVSPHPNVIDL----YDVYEDQNGVHLILELCSG 126
                  + D    N E+ +MRK+      H N++ L    Y   E ++ V+L L L   
Sbjct: 82  -------LQDKRFKNRELQIMRKL-----DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV 129
Query: 127 GELFDRIV-----AQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRED 181
            E   R+      A++    +     + Q+   LA +H   I HRD+KP+N L   D + 
Sbjct: 130 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDT 187
Query: 182 SPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALL-QDRITSKSDMWSLGVILYILLSG 240
           + LK+ DFG +      +P V    S  Y +PE +      TS  D+WS G +L  LL G
Sbjct: 188 AVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 247
Query: 241 YPPFIAQS 248
            P F   S
Sbjct: 248 QPIFPGDS 255

>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 76/291 (26%), Positives = 122/291 (41%), Gaps = 54/291 (18%)
Query: 17  ILGRGGFSVVRRGIKKTC-GETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFFPTRK 75
           ILG G F  V  G+     GE   VA+KT ++                            
Sbjct: 15  ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKK---------------------------- 46
Query: 76  QVSVSDALLTNEILVMRK--IVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRI 133
                D  L N+   M +  I++N+  HP+++ L  + E++    +I+EL   GEL   +
Sbjct: 47  -----DCTLDNKEKFMSEAVIMKNLD-HPHIVKLIGIIEEE-PTWIIMELYPYGELGHYL 99
Query: 134 VAQERYMEVGAAAVIR-QIAEGLAALHQANIVHRDLKPENCLFLNDREDSP--LKIMDFG 190
              +  ++V    +   QI + +A L   N VHRD+   N L       SP  +K+ DFG
Sbjct: 100 ERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVA-----SPECVKLGDFG 154
Query: 191 LSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIA 246
           LS     E Y    V     I ++SPE++   R T+ SD+W   V ++ +LS G  PF  
Sbjct: 155 LSRYIEDEDYYKASVTRL-PIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFW 213
Query: 247 QSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELL 297
             N+    ++  G+          +  +   L++     DP+ RP   EL+
Sbjct: 214 LENKDVIGVLEKGDRLPKPDLCPPVLYT---LMTRCWDYDPSDRPRFTELV 261

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 73/267 (27%), Positives = 116/267 (43%), Gaps = 63/267 (23%)
Query: 10  DEYEV-------TDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXX 62
           DE+EV        + LG G F  V  G     G T +VA+K+L++ GS +P         
Sbjct: 7   DEWEVPRETLKLVERLGAGQFGEVWMGYYN--GHT-KVAVKSLKQ-GSMSP--------- 53
Query: 63  XXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILE 122
                             DA L  E  +M+++      H  ++ LY V   Q  +++I E
Sbjct: 54  ------------------DAFLA-EANLMKQL-----QHQRLVRLYAVV-TQEPIYIITE 88
Query: 123 LCSGGELFDRI-------VAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLF 175
               G L D +       +   + +++ A     QIAEG+A + + N +HRDL+  N L 
Sbjct: 89  YMENGSLVDFLKTPSGIKLTINKLLDMAA-----QIAEGMAFIEERNYIHRDLRAANILV 143
Query: 176 LNDREDSPLKIMDFGLSSV--EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVI 233
               +    KI DFGL+ +  +       G    I + +PEA+     T KSD+WS G++
Sbjct: 144 ---SDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 200
Query: 234 LY-ILLSGYPPFIAQSNRQKQQMIMAG 259
           L  I+  G  P+   +N +  Q +  G
Sbjct: 201 LTEIVTHGRIPYPGMTNPEVIQNLERG 227

>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 103/242 (42%), Gaps = 52/242 (21%)
Query: 16  DILGRGGFSVVRRG-IKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFFPTR 74
           +++GRG F  V  G +    G+    A+K+L RI                          
Sbjct: 33  EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-------------------------- 66
Query: 75  KQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLI-LELCSGGELFDRI 133
                +D    ++ L    I+++ S HPNV+ L  +     G  L+ L     G+L + I
Sbjct: 67  -----TDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI 120
Query: 134 VAQERYMEVG-AAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS 192
             +     V        Q+A+G+  L     VHRDL   NC+     E   +K+ DFGL+
Sbjct: 121 RNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCML---DEKFTVKVADFGLA 177
Query: 193 ---------SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYP 242
                    SV   T    G    + +++ E+L   + T+KSD+WS GV+L+ L++ G P
Sbjct: 178 RDMYDKEYYSVHNKT----GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 233
Query: 243 PF 244
           P+
Sbjct: 234 PY 235

>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 103/242 (42%), Gaps = 52/242 (21%)
Query: 16  DILGRGGFSVVRRG-IKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFFPTR 74
           +++GRG F  V  G +    G+    A+K+L RI                          
Sbjct: 31  EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-------------------------- 64
Query: 75  KQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLI-LELCSGGELFDRI 133
                +D    ++ L    I+++ S HPNV+ L  +     G  L+ L     G+L + I
Sbjct: 65  -----TDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI 118
Query: 134 VAQERYMEVG-AAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS 192
             +     V        Q+A+G+  L     VHRDL   NC+     E   +K+ DFGL+
Sbjct: 119 RNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCML---DEKFTVKVADFGLA 175
Query: 193 ---------SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYP 242
                    SV   T    G    + +++ E+L   + T+KSD+WS GV+L+ L++ G P
Sbjct: 176 RDMYDKEYYSVHNKT----GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 231
Query: 243 PF 244
           P+
Sbjct: 232 PY 233

>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 99/248 (39%), Gaps = 53/248 (21%)
Query: 12  YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFF 71
           Y  T ++G G F VV +   K C     VAIK +                          
Sbjct: 56  YTDTKVIGNGSFGVVYQA--KLCDSGELVAIKKV-------------------------- 87
Query: 72  PTRKQVSVSDALLTN-EILVMRKIVENVSPHPNVIDL----YDVYEDQNGVHLILELCSG 126
                  + D    N E+ +MRK+      H N++ L    Y   E ++ V+L L L   
Sbjct: 88  -------LQDKRFKNRELQIMRKL-----DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV 135
Query: 127 GELFDRIV-----AQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRED 181
            E   R+      A++    +     + Q+   LA +H   I HRD+KP+N L   D + 
Sbjct: 136 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDT 193
Query: 182 SPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALL-QDRITSKSDMWSLGVILYILLSG 240
           + LK+ DFG +      +P V    S  Y +PE +      TS  D+WS G +L  LL G
Sbjct: 194 AVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 253
Query: 241 YPPFIAQS 248
            P F   S
Sbjct: 254 QPIFPGDS 261

>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 76/291 (26%), Positives = 122/291 (41%), Gaps = 54/291 (18%)
Query: 17  ILGRGGFSVVRRGIKKTC-GETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFFPTRK 75
           ILG G F  V  G+     GE   VA+KT ++                            
Sbjct: 31  ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKK---------------------------- 62
Query: 76  QVSVSDALLTNEILVMRK--IVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRI 133
                D  L N+   M +  I++N+  HP+++ L  + E++    +I+EL   GEL   +
Sbjct: 63  -----DCTLDNKEKFMSEAVIMKNLD-HPHIVKLIGIIEEE-PTWIIMELYPYGELGHYL 115
Query: 134 VAQERYMEVGAAAVIR-QIAEGLAALHQANIVHRDLKPENCLFLNDREDSP--LKIMDFG 190
              +  ++V    +   QI + +A L   N VHRD+   N L       SP  +K+ DFG
Sbjct: 116 ERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVA-----SPECVKLGDFG 170
Query: 191 LSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIA 246
           LS     E Y    V     I ++SPE++   R T+ SD+W   V ++ +LS G  PF  
Sbjct: 171 LSRYIEDEDYYKASVTRL-PIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFW 229
Query: 247 QSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELL 297
             N+    ++  G+          +  +   L++     DP+ RP   EL+
Sbjct: 230 LENKDVIGVLEKGDRLPKPDLCPPVLYT---LMTRCWDYDPSDRPRFTELV 277

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/267 (27%), Positives = 116/267 (43%), Gaps = 63/267 (23%)
Query: 10  DEYEV-------TDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXX 62
           DE+EV        + LG G F  V  G     G T +VA+K+L++ GS +P         
Sbjct: 8   DEWEVPRETLKLVERLGAGQFGEVWMGYYN--GHT-KVAVKSLKQ-GSMSP--------- 54
Query: 63  XXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILE 122
                             DA L  E  +M+++      H  ++ LY V   Q  +++I E
Sbjct: 55  ------------------DAFLA-EANLMKQL-----QHQRLVRLYAVV-TQEPIYIITE 89
Query: 123 LCSGGELFDRI-------VAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLF 175
               G L D +       +   + +++ A     QIAEG+A + + N +HRDL+  N L 
Sbjct: 90  YMENGSLVDFLKTPSGIKLTINKLLDMAA-----QIAEGMAFIEERNYIHRDLRAANILV 144
Query: 176 LNDREDSPLKIMDFGLSSV--EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVI 233
               +    KI DFGL+ +  +       G    I + +PEA+     T KSD+WS G++
Sbjct: 145 ---SDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 201
Query: 234 LY-ILLSGYPPFIAQSNRQKQQMIMAG 259
           L  I+  G  P+   +N +  Q +  G
Sbjct: 202 LTEIVTHGRIPYPGMTNPEVIQNLERG 228

>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 76/291 (26%), Positives = 122/291 (41%), Gaps = 54/291 (18%)
Query: 17  ILGRGGFSVVRRGIKKTC-GETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFFPTRK 75
           ILG G F  V  G+     GE   VA+KT ++                            
Sbjct: 19  ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKK---------------------------- 50
Query: 76  QVSVSDALLTNEILVMRK--IVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRI 133
                D  L N+   M +  I++N+  HP+++ L  + E++    +I+EL   GEL   +
Sbjct: 51  -----DCTLDNKEKFMSEAVIMKNLD-HPHIVKLIGIIEEE-PTWIIMELYPYGELGHYL 103
Query: 134 VAQERYMEVGAAAVIR-QIAEGLAALHQANIVHRDLKPENCLFLNDREDSP--LKIMDFG 190
              +  ++V    +   QI + +A L   N VHRD+   N L       SP  +K+ DFG
Sbjct: 104 ERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVA-----SPECVKLGDFG 158
Query: 191 LSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIA 246
           LS     E Y    V     I ++SPE++   R T+ SD+W   V ++ +LS G  PF  
Sbjct: 159 LSRYIEDEDYYKASVTRL-PIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFW 217
Query: 247 QSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELL 297
             N+    ++  G+          +  +   L++     DP+ RP   EL+
Sbjct: 218 LENKDVIGVLEKGDRLPKPDLCPPVLYT---LMTRCWDYDPSDRPRFTELV 265

>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 99/248 (39%), Gaps = 53/248 (21%)
Query: 12  YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFF 71
           Y  T ++G G F VV +   K C     VAIK +                          
Sbjct: 35  YTDTKVIGNGSFGVVYQA--KLCDSGELVAIKKV-------------------------- 66
Query: 72  PTRKQVSVSDALLTN-EILVMRKIVENVSPHPNVIDL----YDVYEDQNGVHLILELCSG 126
                  + D    N E+ +MRK+      H N++ L    Y   E ++ V+L L L   
Sbjct: 67  -------LQDKRFKNRELQIMRKL-----DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV 114
Query: 127 GELFDRIV-----AQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRED 181
            E   R+      A++    +     + Q+   LA +H   I HRD+KP+N L   D + 
Sbjct: 115 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDT 172
Query: 182 SPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALL-QDRITSKSDMWSLGVILYILLSG 240
           + LK+ DFG +      +P V    S  Y +PE +      TS  D+WS G +L  LL G
Sbjct: 173 AVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 232
Query: 241 YPPFIAQS 248
            P F   S
Sbjct: 233 QPIFPGDS 240

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 24/195 (12%)
Query: 75  KQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRI- 133
           KQ S+S      E  +M+++      H  ++ LY V   Q  +++I E    G L D + 
Sbjct: 46  KQGSMSPDAFLAEANLMKQL-----QHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLK 99
Query: 134 ------VAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIM 187
                 +   + +++ A     QIAEG+A + + N +HRDL+  N L     +    KI 
Sbjct: 100 TPSGIKLTINKLLDMAA-----QIAEGMAFIEERNYIHRDLRAANILV---SDTLSCKIA 151
Query: 188 DFGLSSV--EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILLSGYPPF 244
           DFGL+ +  +       G    I + +PEA+     T KSD+WS G++L  I+  G  P+
Sbjct: 152 DFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 211
Query: 245 IAQSNRQKQQMIMAG 259
              +N +  Q +  G
Sbjct: 212 PGMTNPEVIQNLERG 226

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 76/280 (27%), Positives = 121/280 (43%), Gaps = 68/280 (24%)
Query: 2   GQETRK-----LTDEYEV-------TDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIG 49
           G +T+K       DE+EV        + LG G F  V  G     G T +VA+K+L++ G
Sbjct: 1   GSQTQKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYN--GHT-KVAVKSLKQ-G 56
Query: 50  STTPYGFPXXXXXXXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYD 109
           S +P                           DA L  E  +M+++      H  ++ LY 
Sbjct: 57  SMSP---------------------------DAFLA-EANLMKQLQ-----HQRLVRLYA 83
Query: 110 VYEDQNGVHLILELCSGGELFDRI-------VAQERYMEVGAAAVIRQIAEGLAALHQAN 162
           V   Q  +++I E    G L D +       +   + +++ A     QIAEG+A + + N
Sbjct: 84  VV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA-----QIAEGMAFIEERN 137
Query: 163 IVHRDLKPENCLFLNDREDSPLKIMDFGLSSV--EGYTDPVVGLFGSIDYVSPEALLQDR 220
            +HRDL+  N L     +    KI DFGL+ +  +       G    I + +PEA+    
Sbjct: 138 YIHRDLRAANILV---SDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT 194
Query: 221 ITSKSDMWSLGVILY-ILLSGYPPFIAQSNRQKQQMIMAG 259
            T KSD+WS G++L  I+  G  P+   +N +  Q +  G
Sbjct: 195 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG 234

>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 99/248 (39%), Gaps = 53/248 (21%)
Query: 12  YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFF 71
           Y  T ++G G F VV +   K C     VAIK +                          
Sbjct: 41  YTDTKVIGNGSFGVVYQA--KLCDSGELVAIKKV-------------------------- 72
Query: 72  PTRKQVSVSDALLTN-EILVMRKIVENVSPHPNVIDL----YDVYEDQNGVHLILELCSG 126
                  + D    N E+ +MRK+      H N++ L    Y   E ++ V+L L L   
Sbjct: 73  -------LQDKRFKNRELQIMRKL-----DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV 120
Query: 127 GELFDRIV-----AQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRED 181
            E   R+      A++    +     + Q+   LA +H   I HRD+KP+N L   D + 
Sbjct: 121 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDT 178
Query: 182 SPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALL-QDRITSKSDMWSLGVILYILLSG 240
           + LK+ DFG +      +P V    S  Y +PE +      TS  D+WS G +L  LL G
Sbjct: 179 AVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 238
Query: 241 YPPFIAQS 248
            P F   S
Sbjct: 239 QPIFPGDS 246

>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 99/248 (39%), Gaps = 53/248 (21%)
Query: 12  YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFF 71
           Y  T ++G G F VV +   K C     VAIK +                          
Sbjct: 30  YTDTKVIGNGSFGVVYQA--KLCDSGELVAIKKV-------------------------- 61
Query: 72  PTRKQVSVSDALLTN-EILVMRKIVENVSPHPNVIDL----YDVYEDQNGVHLILELCSG 126
                  + D    N E+ +MRK+      H N++ L    Y   E ++ V+L L L   
Sbjct: 62  -------LQDKRFKNRELQIMRKL-----DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV 109
Query: 127 GELFDRIV-----AQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRED 181
            E   R+      A++    +     + Q+   LA +H   I HRD+KP+N L   D + 
Sbjct: 110 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDT 167
Query: 182 SPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALL-QDRITSKSDMWSLGVILYILLSG 240
           + LK+ DFG +      +P V    S  Y +PE +      TS  D+WS G +L  LL G
Sbjct: 168 AVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 227
Query: 241 YPPFIAQS 248
            P F   S
Sbjct: 228 QPIFPGDS 235

>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 99/248 (39%), Gaps = 53/248 (21%)
Query: 12  YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFF 71
           Y  T ++G G F VV +   K C     VAIK +                          
Sbjct: 34  YTDTKVIGNGSFGVVYQA--KLCDSGELVAIKKV-------------------------- 65
Query: 72  PTRKQVSVSDALLTN-EILVMRKIVENVSPHPNVIDL----YDVYEDQNGVHLILELCSG 126
                  + D    N E+ +MRK+      H N++ L    Y   E ++ V+L L L   
Sbjct: 66  -------LQDKRFKNRELQIMRKL-----DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV 113
Query: 127 GELFDRIV-----AQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRED 181
            E   R+      A++    +     + Q+   LA +H   I HRD+KP+N L   D + 
Sbjct: 114 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDT 171
Query: 182 SPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALL-QDRITSKSDMWSLGVILYILLSG 240
           + LK+ DFG +      +P V    S  Y +PE +      TS  D+WS G +L  LL G
Sbjct: 172 AVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 231
Query: 241 YPPFIAQS 248
            P F   S
Sbjct: 232 QPIFPGDS 239

>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 99/248 (39%), Gaps = 53/248 (21%)
Query: 12  YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFF 71
           Y  T ++G G F VV +   K C     VAIK +                          
Sbjct: 56  YTDTKVIGNGSFGVVYQA--KLCDSGELVAIKKV-------------------------- 87
Query: 72  PTRKQVSVSDALLTN-EILVMRKIVENVSPHPNVIDL----YDVYEDQNGVHLILELCSG 126
                  + D    N E+ +MRK+      H N++ L    Y   E ++ V+L L L   
Sbjct: 88  -------LQDKRFKNRELQIMRKL-----DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV 135
Query: 127 GELFDRIV-----AQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRED 181
            E   R+      A++    +     + Q+   LA +H   I HRD+KP+N L   D + 
Sbjct: 136 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDT 193
Query: 182 SPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALL-QDRITSKSDMWSLGVILYILLSG 240
           + LK+ DFG +      +P V    S  Y +PE +      TS  D+WS G +L  LL G
Sbjct: 194 AVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 253
Query: 241 YPPFIAQS 248
            P F   S
Sbjct: 254 QPIFPGDS 261

>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 99/248 (39%), Gaps = 53/248 (21%)
Query: 12  YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFF 71
           Y  T ++G G F VV +   K C     VAIK +                          
Sbjct: 27  YTDTKVIGNGSFGVVYQA--KLCDSGELVAIKKV-------------------------- 58
Query: 72  PTRKQVSVSDALLTN-EILVMRKIVENVSPHPNVIDL----YDVYEDQNGVHLILELCSG 126
                  + D    N E+ +MRK+      H N++ L    Y   E ++ V+L L L   
Sbjct: 59  -------LQDKRFKNRELQIMRKL-----DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV 106
Query: 127 GELFDRIV-----AQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRED 181
            E   R+      A++    +     + Q+   LA +H   I HRD+KP+N L   D + 
Sbjct: 107 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDT 164
Query: 182 SPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALL-QDRITSKSDMWSLGVILYILLSG 240
           + LK+ DFG +      +P V    S  Y +PE +      TS  D+WS G +L  LL G
Sbjct: 165 AVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 224
Query: 241 YPPFIAQS 248
            P F   S
Sbjct: 225 QPIFPGDS 232

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/267 (27%), Positives = 116/267 (43%), Gaps = 63/267 (23%)
Query: 10  DEYEV-------TDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXX 62
           DE+EV        + LG G F  V  G     G T +VA+K+L++ GS +P         
Sbjct: 15  DEWEVPRETLKLVERLGAGQFGEVWMGYYN--GHT-KVAVKSLKQ-GSMSP--------- 61
Query: 63  XXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILE 122
                             DA L  E  +M+++      H  ++ LY V   Q  +++I E
Sbjct: 62  ------------------DAFLA-EANLMKQLQ-----HQRLVRLYAVV-TQEPIYIITE 96
Query: 123 LCSGGELFDRI-------VAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLF 175
               G L D +       +   + +++ A     QIAEG+A + + N +HRDL+  N L 
Sbjct: 97  YMENGSLVDFLKTPSGIKLTINKLLDMAA-----QIAEGMAFIEERNYIHRDLRAANILV 151
Query: 176 LNDREDSPLKIMDFGLSSV--EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVI 233
               +    KI DFGL+ +  +       G    I + +PEA+     T KSD+WS G++
Sbjct: 152 ---SDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 208
Query: 234 LY-ILLSGYPPFIAQSNRQKQQMIMAG 259
           L  I+  G  P+   +N +  Q +  G
Sbjct: 209 LTEIVTHGRIPYPGMTNPEVIQNLERG 235

>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 99/248 (39%), Gaps = 53/248 (21%)
Query: 12  YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFF 71
           Y  T ++G G F VV +   K C     VAIK +                          
Sbjct: 58  YTDTKVIGNGSFGVVYQA--KLCDSGELVAIKKV-------------------------- 89
Query: 72  PTRKQVSVSDALLTN-EILVMRKIVENVSPHPNVIDL----YDVYEDQNGVHLILELCSG 126
                  + D    N E+ +MRK+      H N++ L    Y   E ++ V+L L L   
Sbjct: 90  -------LQDKRFKNRELQIMRKL-----DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV 137
Query: 127 GELFDRIV-----AQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRED 181
            E   R+      A++    +     + Q+   LA +H   I HRD+KP+N L   D + 
Sbjct: 138 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDT 195
Query: 182 SPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALL-QDRITSKSDMWSLGVILYILLSG 240
           + LK+ DFG +      +P V    S  Y +PE +      TS  D+WS G +L  LL G
Sbjct: 196 AVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 255
Query: 241 YPPFIAQS 248
            P F   S
Sbjct: 256 QPIFPGDS 263

>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2 (Erbb2). Length = 338

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 113/262 (43%), Gaps = 53/262 (20%)
Query: 11  EYEVTDILGRGGFSVVRRGIKKTCGETNQ--VAIKTLRRIGSTTPYGFPXXXXXXXXXQI 68
           E     +LG G F  V +GI    GE  +  VAIK LR   +T+P               
Sbjct: 18  ELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRE--NTSPKA------------- 62
Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
                             EIL    ++  V   P V  L  +      V L+ +L   G 
Sbjct: 63  ----------------NKEILDEAYVMAGVG-SPYVSRLLGICLTST-VQLVTQLMPYGC 104
Query: 129 LFDRIVAQERYMEVGAAAVIR---QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLK 185
           L D +  +E    +G+  ++    QIA+G++ L    +VHRDL   N L    +  + +K
Sbjct: 105 LLDHV--RENRGRLGSQDLLNWCMQIAKGMSYLEDVRLVHRDLAARNVLV---KSPNHVK 159
Query: 186 IMDFGLSSV------EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS 239
           I DFGL+ +      E + D   G    I +++ E++L+ R T +SD+WS GV ++ L++
Sbjct: 160 ITDFGLARLLDIDETEYHAD---GGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMT 216
Query: 240 -GYPPFIAQSNRQKQQMIMAGE 260
            G  P+     R+   ++  GE
Sbjct: 217 FGAKPYDGIPAREIPDLLEKGE 238

>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 99/248 (39%), Gaps = 53/248 (21%)
Query: 12  YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFF 71
           Y  T ++G G F VV +   K C     VAIK +                          
Sbjct: 34  YTDTKVIGNGSFGVVYQA--KLCDSGELVAIKKV-------------------------- 65
Query: 72  PTRKQVSVSDALLTN-EILVMRKIVENVSPHPNVIDL----YDVYEDQNGVHLILELCSG 126
                  + D    N E+ +MRK+      H N++ L    Y   E ++ V+L L L   
Sbjct: 66  -------LQDKRFKNRELQIMRKL-----DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV 113
Query: 127 GELFDRIV-----AQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRED 181
            E   R+      A++    +     + Q+   LA +H   I HRD+KP+N L   D + 
Sbjct: 114 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDT 171
Query: 182 SPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALL-QDRITSKSDMWSLGVILYILLSG 240
           + LK+ DFG +      +P V    S  Y +PE +      TS  D+WS G +L  LL G
Sbjct: 172 AVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 231
Query: 241 YPPFIAQS 248
            P F   S
Sbjct: 232 QPIFPGDS 239

>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 75/165 (45%), Gaps = 24/165 (14%)
Query: 86  NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE-RYMEVGA 144
            E+ VMR +      HPNV+    V      ++ I E   GG L   I + + +Y     
Sbjct: 56  KEVKVMRCL-----EHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQR 110
Query: 145 AAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSS--VEGYTDP-- 200
            +  + IA G+A LH  NI+HRDL   NCL    RE+  + + DFGL+   V+  T P  
Sbjct: 111 VSFAKDIASGMAYLHSMNIIHRDLNSHNCLV---RENKNVVVADFGLARLMVDEKTQPEG 167
Query: 201 -----------VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVIL 234
                         + G+  +++PE +       K D++S G++L
Sbjct: 168 LRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVL 212

>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 99/248 (39%), Gaps = 53/248 (21%)
Query: 12  YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFF 71
           Y  T ++G G F VV +   K C     VAIK +                          
Sbjct: 60  YTDTKVIGNGSFGVVYQA--KLCDSGELVAIKKV-------------------------- 91
Query: 72  PTRKQVSVSDALLTN-EILVMRKIVENVSPHPNVIDL----YDVYEDQNGVHLILELCSG 126
                  + D    N E+ +MRK+      H N++ L    Y   E ++ V+L L L   
Sbjct: 92  -------LQDKRFKNRELQIMRKL-----DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV 139
Query: 127 GELFDRIV-----AQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRED 181
            E   R+      A++    +     + Q+   LA +H   I HRD+KP+N L   D + 
Sbjct: 140 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDT 197
Query: 182 SPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALL-QDRITSKSDMWSLGVILYILLSG 240
           + LK+ DFG +      +P V    S  Y +PE +      TS  D+WS G +L  LL G
Sbjct: 198 AVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 257
Query: 241 YPPFIAQS 248
            P F   S
Sbjct: 258 QPIFPGDS 265

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/267 (27%), Positives = 116/267 (43%), Gaps = 63/267 (23%)
Query: 10  DEYEV-------TDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXX 62
           DE+EV        + LG G F  V  G     G T +VA+K+L++ GS +P         
Sbjct: 6   DEWEVPRETLKLVERLGAGQFGEVWMGYYN--GHT-KVAVKSLKQ-GSMSP--------- 52
Query: 63  XXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILE 122
                             DA L  E  +M+++      H  ++ LY V   Q  +++I E
Sbjct: 53  ------------------DAFLA-EANLMKQL-----QHQRLVRLYAVV-TQEPIYIITE 87
Query: 123 LCSGGELFDRI-------VAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLF 175
               G L D +       +   + +++ A     QIAEG+A + + N +HRDL+  N L 
Sbjct: 88  YMENGSLVDFLKTPSGIKLTINKLLDMAA-----QIAEGMAFIEERNYIHRDLRAANILV 142
Query: 176 LNDREDSPLKIMDFGLSSV--EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVI 233
               +    KI DFGL+ +  +       G    I + +PEA+     T KSD+WS G++
Sbjct: 143 ---SDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 199
Query: 234 LY-ILLSGYPPFIAQSNRQKQQMIMAG 259
           L  I+  G  P+   +N +  Q +  G
Sbjct: 200 LTEIVTHGRIPYPGMTNPEVIQNLERG 226

>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 110/243 (45%), Gaps = 47/243 (19%)
Query: 11  EYEVTDILGRGGFSVVRRGIKKTCGETNQ--VAIKTLRRIGSTTPYGFPXXXXXXXXXQI 68
           E++   +LG G F  V +G+    GE  +  VAIK LR   +T+P               
Sbjct: 17  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPK-------------- 60
Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
                      ++  + +E  VM   V+N    P+V  L  +      V LI++L   G 
Sbjct: 61  -----------ANKEILDEAYVMAS-VDN----PHVCRLLGICLTST-VQLIMQLMPFGX 103
Query: 129 LFDRIVAQERYMEVGAAAVIR---QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLK 185
           L D +  +E    +G+  ++    QIA+G+  L    +VHRDL   N L    +    +K
Sbjct: 104 LLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH---VK 158
Query: 186 IMDFGLSSVEGYTDPVVGLFGS---IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GY 241
           I DFGL+ + G  +      G    I +++ E++L    T +SD+WS GV ++ L++ G 
Sbjct: 159 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 218
Query: 242 PPF 244
            P+
Sbjct: 219 KPY 221

>pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 112/264 (42%), Gaps = 68/264 (25%)
Query: 13  EVTDILGRGGFSVVRR----GIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQI 68
           E   +LG G F  V      GI KT G + QVA+K L+                      
Sbjct: 48  EFGKVLGSGAFGKVMNATAYGISKT-GVSIQVAVKMLKE--------------------- 85
Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
                +   S  +AL++       K++  +  H N+++L         ++LI E C  G+
Sbjct: 86  -----KADSSEREALMSE-----LKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGD 135
Query: 129 LFDRIVA--------------QERYMEVGAAAVI---------RQIAEGLAALHQANIVH 165
           L + + +              Q+R  E     V+          Q+A+G+  L   + VH
Sbjct: 136 LLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVH 195
Query: 166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGS----IDYVSPEALLQDRI 221
           RDL   N L  + +    +KI DFGL+  +  +D    + G+    + +++PE+L +   
Sbjct: 196 RDLAARNVLVTHGK---VVKICDFGLAR-DIMSDSNYVVRGNARLPVKWMAPESLFEGIY 251
Query: 222 TSKSDMWSLGVILYILLS-GYPPF 244
           T KSD+WS G++L+ + S G  P+
Sbjct: 252 TIKSDVWSYGILLWEIFSLGVNPY 275

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/267 (27%), Positives = 116/267 (43%), Gaps = 63/267 (23%)
Query: 10  DEYEV-------TDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXX 62
           DE+EV        + LG G F  V  G     G T +VA+K+L++ GS +P         
Sbjct: 12  DEWEVPRETLKLVERLGAGQFGEVWMGYYN--GHT-KVAVKSLKQ-GSMSP--------- 58
Query: 63  XXXXQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILE 122
                             DA L  E  +M+++      H  ++ LY V   Q  +++I E
Sbjct: 59  ------------------DAFLA-EANLMKQLQ-----HQRLVRLYAVV-TQEPIYIITE 93
Query: 123 LCSGGELFDRI-------VAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLF 175
               G L D +       +   + +++ A     QIAEG+A + + N +HRDL+  N L 
Sbjct: 94  YMENGSLVDFLKTPSGIKLTINKLLDMAA-----QIAEGMAFIEERNYIHRDLRAANILV 148
Query: 176 LNDREDSPLKIMDFGLSSV--EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVI 233
               +    KI DFGL+ +  +       G    I + +PEA+     T KSD+WS G++
Sbjct: 149 ---SDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 205
Query: 234 LY-ILLSGYPPFIAQSNRQKQQMIMAG 259
           L  I+  G  P+   +N +  Q +  G
Sbjct: 206 LTEIVTHGRIPYPGMTNPEVIQNLERG 232

>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/235 (22%), Positives = 104/235 (44%), Gaps = 32/235 (13%)
Query: 84  LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRI---------- 133
           L +E+ +M+ I      H N+I+L         +++I+E  S G L + +          
Sbjct: 87  LVSEMEMMKMI----GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEY 142
Query: 134 ------VAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIM 187
                 V +E+       +   Q+A G+  L     +HRDL   N L     E++ +KI 
Sbjct: 143 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIA 199
Query: 188 DFGLS----SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILLSGYP 242
           DFGL+    +++ Y +   G    + +++PEAL     T +SD+WS GV+++ I   G  
Sbjct: 200 DFGLARDINNIDYYKNTTNGRL-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 243 PFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELL 297
           P+      +  +++  G          N ++    ++       P++RP+ ++L+
Sbjct: 259 PYPGIPVEELFKLLKEGHRM---DKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310

>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 99/248 (39%), Gaps = 53/248 (21%)
Query: 12  YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFF 71
           Y  T ++G G F VV +   K C     VAIK +                          
Sbjct: 101 YTDTKVIGNGSFGVVYQA--KLCDSGELVAIKKV-------------------------- 132
Query: 72  PTRKQVSVSDALLTN-EILVMRKIVENVSPHPNVIDL----YDVYEDQNGVHLILELCSG 126
                  + D    N E+ +MRK+      H N++ L    Y   E ++ V+L L L   
Sbjct: 133 -------LQDKRFKNRELQIMRKL-----DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV 180
Query: 127 GELFDRIV-----AQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRED 181
            E   R+      A++    +     + Q+   LA +H   I HRD+KP+N L   D + 
Sbjct: 181 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDT 238
Query: 182 SPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALL-QDRITSKSDMWSLGVILYILLSG 240
           + LK+ DFG +      +P V    S  Y +PE +      TS  D+WS G +L  LL G
Sbjct: 239 AVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 298
Query: 241 YPPFIAQS 248
            P F   S
Sbjct: 299 QPIFPGDS 306

>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 99/248 (39%), Gaps = 53/248 (21%)
Query: 12  YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFF 71
           Y  T ++G G F VV +   K C     VAIK +                          
Sbjct: 23  YTDTKVIGNGSFGVVYQA--KLCDSGELVAIKKV-------------------------- 54
Query: 72  PTRKQVSVSDALLTN-EILVMRKIVENVSPHPNVIDL----YDVYEDQNGVHLILELCSG 126
                  + D    N E+ +MRK+      H N++ L    Y   E ++ V+L L L   
Sbjct: 55  -------LQDKRFKNRELQIMRKL-----DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV 102
Query: 127 GELFDRIV-----AQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRED 181
            E   R+      A++    +     + Q+   LA +H   I HRD+KP+N L   D + 
Sbjct: 103 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDT 160
Query: 182 SPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALL-QDRITSKSDMWSLGVILYILLSG 240
           + LK+ DFG +      +P V    S  Y +PE +      TS  D+WS G +L  LL G
Sbjct: 161 AVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 220
Query: 241 YPPFIAQS 248
            P F   S
Sbjct: 221 QPIFPGDS 228

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 62/119 (52%), Gaps = 9/119 (7%)
Query: 146 AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF 205
           AV  Q+A G+  L   + VHRDL   NCL     +   +KI DFG+S  + Y+     + 
Sbjct: 133 AVASQVAAGMVYLAGLHFVHRDLATRNCLV---GQGLVVKIGDFGMSR-DIYSTDYYRVG 188
Query: 206 G----SIDYVSPEALLQDRITSKSDMWSLGVILY-ILLSGYPPFIAQSNRQKQQMIMAG 259
           G     I ++ PE++L  + T++SD+WS GV+L+ I   G  P+   SN +    I  G
Sbjct: 189 GRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQG 247

>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 99/248 (39%), Gaps = 53/248 (21%)
Query: 12  YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFF 71
           Y  T ++G G F VV +   K C     VAIK +                          
Sbjct: 22  YTDTKVIGNGSFGVVYQA--KLCDSGELVAIKKV-------------------------- 53
Query: 72  PTRKQVSVSDALLTN-EILVMRKIVENVSPHPNVIDL----YDVYEDQNGVHLILELCSG 126
                  + D    N E+ +MRK+      H N++ L    Y   E ++ V+L L L   
Sbjct: 54  -------LQDKRFKNRELQIMRKL-----DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV 101
Query: 127 GELFDRIV-----AQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRED 181
            E   R+      A++    +     + Q+   LA +H   I HRD+KP+N L   D + 
Sbjct: 102 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDT 159
Query: 182 SPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALL-QDRITSKSDMWSLGVILYILLSG 240
           + LK+ DFG +      +P V    S  Y +PE +      TS  D+WS G +L  LL G
Sbjct: 160 AVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 219
Query: 241 YPPFIAQS 248
            P F   S
Sbjct: 220 QPIFPGDS 227

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 62/119 (52%), Gaps = 9/119 (7%)
Query: 146 AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF 205
           AV  Q+A G+  L   + VHRDL   NCL     +   +KI DFG+S  + Y+     + 
Sbjct: 139 AVASQVAAGMVYLAGLHFVHRDLATRNCLV---GQGLVVKIGDFGMSR-DIYSTDYYRVG 194
Query: 206 G----SIDYVSPEALLQDRITSKSDMWSLGVILY-ILLSGYPPFIAQSNRQKQQMIMAG 259
           G     I ++ PE++L  + T++SD+WS GV+L+ I   G  P+   SN +    I  G
Sbjct: 195 GRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQG 253

>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 99/248 (39%), Gaps = 53/248 (21%)
Query: 12  YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFF 71
           Y  T ++G G F VV +   K C     VAIK +                          
Sbjct: 22  YTDTKVIGNGSFGVVYQA--KLCDSGELVAIKKV-------------------------- 53
Query: 72  PTRKQVSVSDALLTN-EILVMRKIVENVSPHPNVIDL----YDVYEDQNGVHLILELCSG 126
                  + D    N E+ +MRK+      H N++ L    Y   E ++ V+L L L   
Sbjct: 54  -------LQDKRFKNRELQIMRKL-----DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV 101
Query: 127 GELFDRIV-----AQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRED 181
            E   R+      A++    +     + Q+   LA +H   I HRD+KP+N L   D + 
Sbjct: 102 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDT 159
Query: 182 SPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALL-QDRITSKSDMWSLGVILYILLSG 240
           + LK+ DFG +      +P V    S  Y +PE +      TS  D+WS G +L  LL G
Sbjct: 160 AVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 219
Query: 241 YPPFIAQS 248
            P F   S
Sbjct: 220 QPIFPGDS 227

>pdb|1OMV|A Chain A, Non-Myristoylated Bovine Recoverin (E85q Mutant) With Calcium Bound To Ef-Hand 3 Length = 201

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 73/160 (45%), Gaps = 10/160 (6%)
Query: 350 LKNLLGSHDLNEEEIQNLRIHFRTICANGDNATLSEFEEVL-KAMNMSSLVPLAPRIFDL 408
           L+ L  +    EEE+ +    F   C +G   T  EF+ +  K    +     A  +F  
Sbjct: 13  LEELQLNTKFTEEELSSWYQSFLKECPSG-RITRQEFQTIYSKFFPEADPKAYAQHVFRS 71
Query: 409 FDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRAL--- 465
           FD N DGT+D ++ +         + +  L   F +YD+D +G I+K EV  ++ A+   
Sbjct: 72  FDANSDGTLDFKQYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKM 131
Query: 466 --PDDC--LPVDITEPGK-LDEIFDLMDANNDGKVTFDEF 500
             P+D   LP D   P K  ++I+      +D K+T  EF
Sbjct: 132 ISPEDTKHLPEDENTPEKRAEKIWGFFGKKDDDKLTEKEF 171

>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 99/248 (39%), Gaps = 53/248 (21%)
Query: 12  YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFF 71
           Y  T ++G G F VV +   K C     VAIK +                          
Sbjct: 22  YTDTKVIGNGSFGVVYQA--KLCDSGELVAIKKV-------------------------- 53
Query: 72  PTRKQVSVSDALLTN-EILVMRKIVENVSPHPNVIDL----YDVYEDQNGVHLILELCSG 126
                  + D    N E+ +MRK+      H N++ L    Y   E ++ V+L L L   
Sbjct: 54  -------LQDKRFKNRELQIMRKL-----DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV 101
Query: 127 GELFDRIV-----AQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRED 181
            E   R+      A++    +     + Q+   LA +H   I HRD+KP+N L   D + 
Sbjct: 102 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDT 159
Query: 182 SPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALL-QDRITSKSDMWSLGVILYILLSG 240
           + LK+ DFG +      +P V    S  Y +PE +      TS  D+WS G +L  LL G
Sbjct: 160 AVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 219
Query: 241 YPPFIAQS 248
            P F   S
Sbjct: 220 QPIFPGDS 227

>pdb|2D8N|A Chain A, Crystal Structure Of Human Recoverin At 2.2 A Resolution Length = 207

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 75/160 (46%), Gaps = 10/160 (6%)
Query: 350 LKNLLGSHDLNEEEIQNLRIHFRTICANGDNATLSEFEEVL-KAMNMSSLVPLAPRIFDL 408
           L+ L  +   +EEE+ +    F   C  G   T  +F+ +  K    +     A  +F  
Sbjct: 21  LEELQLNTKFSEEELCSWYQSFLKDCPTG-RITQQQFQSIYAKFFPDTDPKAYAQHVFRS 79
Query: 409 FDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRAL--- 465
           FD+N DGT+D +E +         + +  L   F +YD+D +G I+K EV  ++ A+   
Sbjct: 80  FDSNLDGTLDFKEYVIALHXTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVXAIFKX 139
Query: 466 --PDDC--LPVDITEPGK-LDEIFDLMDANNDGKVTFDEF 500
             P+D   LP D   P K  ++I+     N+D K+T  EF
Sbjct: 140 ITPEDVKLLPDDENTPEKRAEKIWKYFGKNDDDKLTEKEF 179

>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 80/329 (24%), Positives = 124/329 (37%), Gaps = 66/329 (20%)
Query: 12  YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFF 71
           Y  T ++G G F VV +   K C     VAIK                            
Sbjct: 22  YTDTKVIGNGSFGVVYQA--KLCDSGELVAIK---------------------------- 51
Query: 72  PTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDL----YDVYEDQNGVHLILELCSGG 127
               +V    A    E+ +MRK+      H N++ L    Y   E ++ V+L L L    
Sbjct: 52  ----KVLQGKAFKNRELQIMRKL-----DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP 102
Query: 128 ELFDRIV-----AQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDS 182
               R+      A++    +     + Q+   LA +H   I HRD+KP+N L   D + +
Sbjct: 103 ATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTA 160
Query: 183 PLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALL-QDRITSKSDMWSLGVILYILLSGY 241
            LK+ DFG +      +P V    S  Y +PE +      TS  D+WS G +L  LL G 
Sbjct: 161 VLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
Query: 242 PPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSA-QELLNHP 300
           P F   S   +   I+           K + +  ++ I  +   +PN    A  ++  HP
Sbjct: 221 PIFPGDSGVDQLVEII-----------KVLGTPTREQIREM---NPNYTEFAFPQIKAHP 266
Query: 301 WVIGDSAKEEEMDAEIVSRLQSFNARRKL 329
           W      +       + SRL  +    +L
Sbjct: 267 WTKVFRPRTPPEAIALCSRLLEYTPTARL 295

>pdb|1LA3|A Chain A, Solution Structure Of Recoverin Mutant, E85q Length = 201

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 73/160 (45%), Gaps = 10/160 (6%)
Query: 350 LKNLLGSHDLNEEEIQNLRIHFRTICANGDNATLSEFEEVL-KAMNMSSLVPLAPRIFDL 408
           L+ L  +    EEE+ +    F   C +G   T  EF+ +  K    +     A  +F  
Sbjct: 13  LEELQLNTKFTEEELSSWYQSFLKECPSG-RITRQEFQTIYSKFFPEADPKAYAQHVFRS 71
Query: 409 FDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRAL--- 465
           FD N DGT+D ++ +         + +  L   F +YD+D +G I+K EV  ++ A+   
Sbjct: 72  FDANSDGTLDFKQYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKM 131
Query: 466 --PDDC--LPVDITEPGK-LDEIFDLMDANNDGKVTFDEF 500
             P+D   LP D   P K  ++I+      +D K+T  EF
Sbjct: 132 ISPEDTKHLPEDENTPEKRAEKIWGFFGKKDDDKLTEKEF 171

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 62/119 (52%), Gaps = 9/119 (7%)
Query: 146 AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF 205
           AV  Q+A G+  L   + VHRDL   NCL     +   +KI DFG+S  + Y+     + 
Sbjct: 162 AVASQVAAGMVYLAGLHFVHRDLATRNCLV---GQGLVVKIGDFGMSR-DIYSTDYYRVG 217
Query: 206 G----SIDYVSPEALLQDRITSKSDMWSLGVILY-ILLSGYPPFIAQSNRQKQQMIMAG 259
           G     I ++ PE++L  + T++SD+WS GV+L+ I   G  P+   SN +    I  G
Sbjct: 218 GRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQG 276

>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 99/248 (39%), Gaps = 53/248 (21%)
Query: 12  YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFF 71
           Y  T ++G G F VV +   K C     VAIK +                          
Sbjct: 26  YTDTKVIGNGSFGVVYQA--KLCDSGELVAIKKV-------------------------- 57
Query: 72  PTRKQVSVSDALLTN-EILVMRKIVENVSPHPNVIDL----YDVYEDQNGVHLILELCSG 126
                  + D    N E+ +MRK+      H N++ L    Y   E ++ V+L L L   
Sbjct: 58  -------LQDKRFKNRELQIMRKL-----DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV 105
Query: 127 GELFDRIV-----AQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRED 181
            E   R+      A++    +     + Q+   LA +H   I HRD+KP+N L   D + 
Sbjct: 106 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDT 163
Query: 182 SPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALL-QDRITSKSDMWSLGVILYILLSG 240
           + LK+ DFG +      +P V    S  Y +PE +      TS  D+WS G +L  LL G
Sbjct: 164 AVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 223
Query: 241 YPPFIAQS 248
            P F   S
Sbjct: 224 QPIFPGDS 231

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 92/196 (46%), Gaps = 26/196 (13%)
Query: 75  KQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRI- 133
           KQ S+S      E  +M+++      H  ++ LY V   Q  +++I E    G L D + 
Sbjct: 42  KQGSMSPDAFLAEANLMKQL-----QHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLK 95
Query: 134 ------VAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIM 187
                 +   + +++ A     QIAEG+A + + N +HR+L+  N L     +    KI 
Sbjct: 96  TPSGIKLTINKLLDMAA-----QIAEGMAFIEERNYIHRNLRAANILV---SDTLSCKIA 147
Query: 188 DFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILLSGYPP 243
           DFGL+ +     YT      F  I + +PEA+     T KSD+WS G++L  I+  G  P
Sbjct: 148 DFGLARLIEDNEYTAREGAKF-PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 206
Query: 244 FIAQSNRQKQQMIMAG 259
           +   +N +  Q +  G
Sbjct: 207 YPGMTNPEVIQNLERG 222

>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum In Complex With Indirubin E804 Length = 383

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 28/180 (15%)
Query: 148 IRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGS 207
           I Q+   +  +H   I HRD+KP+N L   + +D+ LK+ DFG +     ++P V    S
Sbjct: 147 IYQLFRAVGFIHSLGICHRDIKPQNLLV--NSKDNTLKLCDFGSAKKLIPSEPSVAXICS 204
Query: 208 IDYVSPEALL-QDRITSKSDMWSLGVILYILLSGYPPFIAQSN-------------RQKQ 253
             Y +PE +L     T   D+WS+G +   L+ G P F  +++               K+
Sbjct: 205 RFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKE 264
Query: 254 QMI-MAGEF------SFYEQTWKNI-----SSSAKQLISSLLTVDPNRRPSAQELLNHPW 301
           QMI M   +      +   + W+ I      S A  L+  +L  +P+ R +  E + HP+
Sbjct: 265 QMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPF 324

>pdb|2EU9|A Chain A, Crystal Structure Of Clk3 Length = 355

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/267 (22%), Positives = 105/267 (39%), Gaps = 50/267 (18%)
Query: 8   LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQ 67
           L + YE+   LG G F  V   +    G++ QVA+K +R +G                  
Sbjct: 17  LQERYEIVGNLGEGTFGKVVECLDHARGKS-QVALKIIRNVGKY---------------- 59
Query: 68  IGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGG 127
                 R+   +       EI V++KI E    +  +  L   + + +G   I     G 
Sbjct: 60  ------REAARL-------EINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGK 106
Query: 128 ELFDRIVAQ--ERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDR------ 179
             F+ +     + Y       +  Q+   L  LH+  + H DLKPEN LF+N        
Sbjct: 107 NTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYN 166
Query: 180 ----------EDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWS 229
                     +++ +++ DFG ++ +   +    +  +  Y  PE +L+       D+WS
Sbjct: 167 EHKSCEEKSVKNTSIRVADFGSATFD--HEHHTTIVATRHYRPPEVILELGWAQPCDVWS 224
Query: 230 LGVILYILLSGYPPFIAQSNRQKQQMI 256
           +G IL+    G+  F    NR+   M+
Sbjct: 225 IGCILFEYYRGFTLFQTHENREHLVMM 251

>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 99/248 (39%), Gaps = 53/248 (21%)
Query: 12  YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFF 71
           Y  T ++G G F VV +   K C     VAIK +                          
Sbjct: 22  YTDTKVIGNGSFGVVYQA--KLCDSGELVAIKKV-------------------------- 53
Query: 72  PTRKQVSVSDALLTN-EILVMRKIVENVSPHPNVIDL----YDVYEDQNGVHLILELCSG 126
                  + D    N E+ +MRK+      H N++ L    Y   E ++ V+L L L   
Sbjct: 54  -------LQDKRFKNRELQIMRKL-----DHCNIVRLRYFFYSSGEKKDVVYLNLVLDYV 101
Query: 127 GELFDRIV-----AQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRED 181
            E   R+      A++    +     + Q+   LA +H   I HRD+KP+N L   D + 
Sbjct: 102 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDT 159
Query: 182 SPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALL-QDRITSKSDMWSLGVILYILLSG 240
           + LK+ DFG +      +P V    S  Y +PE +      TS  D+WS G +L  LL G
Sbjct: 160 AVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 219
Query: 241 YPPFIAQS 248
            P F   S
Sbjct: 220 QPIFPGDS 227

>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/235 (22%), Positives = 103/235 (43%), Gaps = 32/235 (13%)
Query: 84  LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRI---------- 133
           L +E+ +M+ I      H N+I+L         +++I+E  S G L + +          
Sbjct: 76  LVSEMEMMKMI----GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEY 131
Query: 134 ------VAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIM 187
                 V +E+       +   Q+A G+  L     +HRDL   N L     E++ +KI 
Sbjct: 132 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIA 188
Query: 188 DFGLS----SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILLSGYP 242
           DFGL+    +++ Y     G    + +++PEAL     T +SD+WS GV+++ I   G  
Sbjct: 189 DFGLARDINNIDYYKKTTNGRL-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 247
Query: 243 PFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELL 297
           P+      +  +++  G          N ++    ++       P++RP+ ++L+
Sbjct: 248 PYPGIPVEELFKLLKEGHRM---DKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 299

>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/235 (22%), Positives = 103/235 (43%), Gaps = 32/235 (13%)
Query: 84  LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRI---------- 133
           L +E+ +M+ I      H N+I+L         +++I+E  S G L + +          
Sbjct: 79  LVSEMEMMKMI----GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEY 134
Query: 134 ------VAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIM 187
                 V +E+       +   Q+A G+  L     +HRDL   N L     E++ +KI 
Sbjct: 135 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIA 191
Query: 188 DFGLS----SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILLSGYP 242
           DFGL+    +++ Y     G    + +++PEAL     T +SD+WS GV+++ I   G  
Sbjct: 192 DFGLARDINNIDYYKKTTNGRL-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 250
Query: 243 PFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELL 297
           P+      +  +++  G          N ++    ++       P++RP+ ++L+
Sbjct: 251 PYPGIPVEELFKLLKEGHRM---DKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 302

>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3 Length = 357

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/272 (22%), Positives = 106/272 (38%), Gaps = 60/272 (22%)
Query: 8   LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQ 67
           L + YE+   LG G F  V   +    G++ QVA+K +R +G                  
Sbjct: 26  LQERYEIVGNLGEGTFGKVVECLDHARGKS-QVALKIIRNVGKY---------------- 68
Query: 68  IGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGG 127
                 R+   +       EI V++KI E    +  +  L   + + +G      +C   
Sbjct: 69  ------REAARL-------EINVLKKIKEKDKENKFLCVLMSDWFNFHG-----HMCIAF 110
Query: 128 ELFDRIVAQ-------ERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDR- 179
           EL  +   +       + Y       +  Q+   L  LH+  + H DLKPEN LF+N   
Sbjct: 111 ELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEF 170
Query: 180 ---------------EDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSK 224
                          +++ +++ DFG ++ +   +    +  +  Y  PE +L+      
Sbjct: 171 ETLYNEHKSCEEKSVKNTSIRVADFGSATFD--HEHHTTIVATRHYRPPEVILELGWAQP 228
Query: 225 SDMWSLGVILYILLSGYPPFIAQSNRQKQQMI 256
            D+WS+G IL+    G+  F    NR+   M+
Sbjct: 229 CDVWSIGCILFEYYRGFTLFQTHENREHLVMM 260

>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki Length = 381

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/272 (22%), Positives = 106/272 (38%), Gaps = 60/272 (22%)
Query: 8   LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQ 67
           L + YE+   LG G F  V   +    G++ QVA+K +R +G                  
Sbjct: 49  LQERYEIVGNLGEGTFGKVVECLDHARGKS-QVALKIIRNVGKY---------------- 91
Query: 68  IGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGG 127
                 R+   +       EI V++KI E    +  +  L   + + +G      +C   
Sbjct: 92  ------REAARL-------EINVLKKIKEKDKENKFLCVLMSDWFNFHG-----HMCIAF 133
Query: 128 ELFDRIVAQ-------ERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDR- 179
           EL  +   +       + Y       +  Q+   L  LH+  + H DLKPEN LF+N   
Sbjct: 134 ELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEF 193
Query: 180 ---------------EDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSK 224
                          +++ +++ DFG ++ +   +    +  +  Y  PE +L+      
Sbjct: 194 ETLYNEHKSCEEKSVKNTSIRVADFGSATFD--HEHHTTIVATRHYRPPEVILELGWAQP 251
Query: 225 SDMWSLGVILYILLSGYPPFIAQSNRQKQQMI 256
            D+WS+G IL+    G+  F    NR+   M+
Sbjct: 252 CDVWSIGCILFEYYRGFTLFQTHENREHLVMM 283

>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik) Length = 356

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 91/201 (45%), Gaps = 9/201 (4%)
Query: 102 PNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQA 161
           P ++ LY    +   V++ +EL  GG L   +  Q    E  A   + Q  EGL  LH  
Sbjct: 126 PRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSR 185
Query: 162 NIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV---EGY-TDPVVGLF--GSIDYVSPEA 215
            I+H D+K +N L  +D   S   + DFG +     +G   D + G +  G+  +++PE 
Sbjct: 186 RILHGDVKADNVLLSSD--GSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEV 243
Query: 216 LLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSA 275
           +L     +K D+WS   ++  +L+G  P+  Q  R    + +A E     +   + +   
Sbjct: 244 VLGRSCDAKVDVWSSCCMMLHMLNGCHPWT-QFFRGPLCLKIASEPPPVREIPPSCAPLT 302
Query: 276 KQLISSLLTVDPNRRPSAQEL 296
            Q I   L  +P  R SA EL
Sbjct: 303 AQAIQEGLRKEPIHRVSAAEL 323

>pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/226 (22%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 93  KIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRI----------------VAQ 136
           ++++ +  H N+I+L         +++I+E  S G L + +                V +
Sbjct: 79  EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 138
Query: 137 ERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS---- 192
           E+       +   Q+A G+  L     +HRDL   N L     E++ +KI DFGL+    
Sbjct: 139 EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLV---TENNVMKIADFGLARDIN 195
Query: 193 SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILLSGYPPFIAQSNRQ 251
           +++ Y     G    + +++PEAL     T +SD+WS GV+++ I   G  P+      +
Sbjct: 196 NIDYYKKTTNGRL-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 254
Query: 252 KQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELL 297
             +++  G          N ++    ++       P++RP+ ++L+
Sbjct: 255 LFKLLKEGHRM---DKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 297

>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 109/243 (44%), Gaps = 47/243 (19%)
Query: 11  EYEVTDILGRGGFSVVRRGIKKTCGETNQ--VAIKTLRRIGSTTPYGFPXXXXXXXXXQI 68
           E++   +LG G F  V +G+    GE  +  VAIK LR   +T+P               
Sbjct: 13  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPK-------------- 56
Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
                      ++  + +E  VM   V+N    P+V  L  +      V LI +L   G 
Sbjct: 57  -----------ANKEILDEAYVMAS-VDN----PHVCRLLGICLTST-VQLITQLMPFGC 99
Query: 129 LFDRIVAQERYMEVGAAAVIR---QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLK 185
           L D +  +E    +G+  ++    QIAEG+  L    +VHRDL   N L    +    +K
Sbjct: 100 LLDYV--REHKDNIGSQYLLNWCVQIAEGMNYLEDRRLVHRDLAARNVLVKTPQH---VK 154
Query: 186 IMDFGLSSVEGYTDPVVGLFGS---IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GY 241
           I DFGL+ + G  +      G    I +++ E++L    T +SD+WS GV ++ L++ G 
Sbjct: 155 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 214
Query: 242 PPF 244
            P+
Sbjct: 215 KPY 217

>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/235 (22%), Positives = 103/235 (43%), Gaps = 32/235 (13%)
Query: 84  LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRI---------- 133
           L +E+ +M+ I      H N+I+L         +++I+E  S G L + +          
Sbjct: 87  LVSEMEMMKMI----GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEY 142
Query: 134 ------VAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIM 187
                 V +E+       +   Q+A G+  L     +HRDL   N L     E++ +KI 
Sbjct: 143 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIA 199
Query: 188 DFGLS----SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILLSGYP 242
           DFGL+    +++ Y     G    + +++PEAL     T +SD+WS GV+++ I   G  
Sbjct: 200 DFGLARDINNIDYYKKTTNGRL-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 243 PFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELL 297
           P+      +  +++  G          N ++    ++       P++RP+ ++L+
Sbjct: 259 PYPGIPVEELFKLLKEGHRM---DKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310

>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 80/173 (46%), Gaps = 25/173 (14%)
Query: 93  KIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRI----------------VAQ 136
           ++++ +  H N+I+L         +++I+E  S G L + +                V +
Sbjct: 138 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 197
Query: 137 ERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS---- 192
           E+       +   Q+A G+  L     +HRDL   N L     E++ +KI DFGL+    
Sbjct: 198 EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLARDIN 254
Query: 193 SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILLSGYPPF 244
           +++ Y     G    + +++PEAL     T +SD+WS GV+++ I   G  P+
Sbjct: 255 NIDYYKKTTNGRL-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 306

>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length = 368

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 63/275 (22%), Positives = 112/275 (40%), Gaps = 64/275 (23%)
Query: 87  EILVMRKIVENVSPHPNV-IDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAA 145
           EI V+ KI E    + N+ + ++D ++    + +  EL  G   FD  +    Y+     
Sbjct: 80  EINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELL-GLSTFD-FLKDNNYLPYPIH 137
Query: 146 AVIR---QIAEGLAALHQANIVHRDLKPENCLFLN-DRE---------------DSPLKI 186
            V     Q+ + +  LH   + H DLKPEN LF+N D E                + +++
Sbjct: 138 QVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRV 197
Query: 187 MDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIA 246
           +DFG ++ +      +    +  Y +PE +L+   +   D+WS+G I++    G+  F  
Sbjct: 198 VDFGSATFDHEHHSTI--VSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQT 255
Query: 247 QSNRQ---------------------KQQMIMAGEFSFYEQT-------------WKNIS 272
             NR+                     KQ+    G   + E T              + ++
Sbjct: 256 HDNREHLAMMERILGPIPSRMIRKTRKQKYFYRGRLDWDENTSAGRYVRENCKPLRRYLT 315
Query: 273 SSAKQ------LISSLLTVDPNRRPSAQELLNHPW 301
           S A++      LI S+L  +P +R +  E L HP+
Sbjct: 316 SEAEEHHQLFDLIESMLEYEPAKRLTLGEALQHPF 350

>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating Protein-3 Length = 211

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 67/125 (53%), Gaps = 3/125 (2%)
Query: 382 TLSEFEEVL--KAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALR 439
           TL EF+ +L  + +N  +   +  ++++ FD N+DG VD  E +   + + + + +  L+
Sbjct: 38  TLHEFKTLLGLQGLNQKANKHI-DQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLK 96
Query: 440 LCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDE 499
             F++YD D +G I K E+  M  A+        ++    ++ +F  +D NNDG++T +E
Sbjct: 97  WYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGELTLEE 156
Query: 500 FRAAM 504
           F   M
Sbjct: 157 FINGM 161

>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 110/243 (45%), Gaps = 47/243 (19%)
Query: 11  EYEVTDILGRGGFSVVRRGIKKTCGETNQ--VAIKTLRRIGSTTPYGFPXXXXXXXXXQI 68
           E++   +LG G F  V +G+    GE  +  VAIK LR   +T+P               
Sbjct: 18  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPK-------------- 61
Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
                      ++  + +E  VM   V+N    P+V  L  +      V LI++L   G 
Sbjct: 62  -----------ANKEILDEAYVMAS-VDN----PHVCRLLGICLTST-VQLIMQLMPFGC 104
Query: 129 LFDRIVAQERYMEVGAAAVIR---QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLK 185
           L D +  +E    +G+  ++    QIA+G+  L    +VHRDL   N L    +    +K
Sbjct: 105 LLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH---VK 159
Query: 186 IMDFGLSSVEGYTDPVVGLFGS---IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GY 241
           I DFGL+ + G  +      G    I +++ E++L    T +SD+WS GV ++ L++ G 
Sbjct: 160 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 219
Query: 242 PPF 244
            P+
Sbjct: 220 KPY 222

>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 110/243 (45%), Gaps = 47/243 (19%)
Query: 11  EYEVTDILGRGGFSVVRRGIKKTCGETNQ--VAIKTLRRIGSTTPYGFPXXXXXXXXXQI 68
           E++   +LG G F  V +G+    GE  +  VAIK LR   +T+P               
Sbjct: 20  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPK-------------- 63
Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
                      ++  + +E  VM   V+N    P+V  L  +      V LI++L   G 
Sbjct: 64  -----------ANKEILDEAYVMAS-VDN----PHVCRLLGICLTST-VQLIMQLMPFGC 106
Query: 129 LFDRIVAQERYMEVGAAAVIR---QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLK 185
           L D +  +E    +G+  ++    QIA+G+  L    +VHRDL   N L    +    +K
Sbjct: 107 LLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH---VK 161
Query: 186 IMDFGLSSVEGYTDPVVGLFGS---IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GY 241
           I DFGL+ + G  +      G    I +++ E++L    T +SD+WS GV ++ L++ G 
Sbjct: 162 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 221
Query: 242 PPF 244
            P+
Sbjct: 222 KPY 224

>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 110/243 (45%), Gaps = 47/243 (19%)
Query: 11  EYEVTDILGRGGFSVVRRGIKKTCGETNQ--VAIKTLRRIGSTTPYGFPXXXXXXXXXQI 68
           E++   +LG G F  V +G+    GE  +  VAIK LR   +T+P               
Sbjct: 17  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPK-------------- 60
Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
                      ++  + +E  VM   V+N    P+V  L  +      V LI++L   G 
Sbjct: 61  -----------ANKEILDEAYVMAS-VDN----PHVCRLLGICLTST-VQLIMQLMPFGC 103
Query: 129 LFDRIVAQERYMEVGAAAVIR---QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLK 185
           L D +  +E    +G+  ++    QIA+G+  L    +VHRDL   N L    +    +K
Sbjct: 104 LLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH---VK 158
Query: 186 IMDFGLSSVEGYTDPVVGLFGS---IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GY 241
           I DFGL+ + G  +      G    I +++ E++L    T +SD+WS GV ++ L++ G 
Sbjct: 159 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 218
Query: 242 PPF 244
            P+
Sbjct: 219 KPY 221

>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 Length = 329

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 78/332 (23%), Positives = 126/332 (37%), Gaps = 85/332 (25%)
Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIG 69
           D+Y++   LGRG +S V   I  T  E  +V +K L+                       
Sbjct: 37  DDYQLVRKLGRGKYSEVFEAINITNNE--KVVVKILK----------------------- 71
Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYED--QNGVHLILELCSGG 127
             P +K          N+I    KI+EN+   PN+I L D+ +D       L+ E  +  
Sbjct: 72  --PVKK----------NKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNT 119
Query: 128 ELFDRIVAQERYMEVGAAAVIRQIAEGLAAL---HQANIVHRDLKPENCLFLNDREDSPL 184
           +       ++ Y  +    +   + E L AL   H   I+HRD+KP N +   D E   L
Sbjct: 120 DF------KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI--DHEHRKL 171
Query: 185 KIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPP 243
           +++D+GL+              S  +  PE L+  ++   S DMWSLG +L  ++    P
Sbjct: 172 RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
Query: 244 FIAQSNRQKQQMIMA---GEFSFYE----------------------QTWKNISSSAKQ- 277
           F    +   Q + +A   G    Y+                      + W+    S  Q 
Sbjct: 232 FFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQH 291
Query: 278 --------LISSLLTVDPNRRPSAQELLNHPW 301
                    +  LL  D   R +A+E + HP+
Sbjct: 292 LVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 323

>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With Pvivit Peptide Length = 156

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 78/150 (52%), Gaps = 11/150 (7%)
Query: 359 LNEEEIQNLRIHFRTI-CANGDNATLSEFEEVLKAMNMSSLV--PLAPRIFDLFDNNRDG 415
           ++ +EI+ L   F+ +   N  + ++ EF      M++  L   PL  R+ D+FD + +G
Sbjct: 1   MDADEIKRLGKRFKKLDLDNSGSLSVEEF------MSLPELQQNPLVQRVIDIFDTDGNG 54
Query: 416 TVDMREILCGFSSLR-KSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDI 474
            VD +E + G S    K   +  LR  F++YD+D+ G I+  E+  +L+ +  + L  D 
Sbjct: 55  EVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLK-DT 113
Query: 475 TEPGKLDEIFDLMDANNDGKVTFDEFRAAM 504
                +D+     D + DG+++F+EF A +
Sbjct: 114 QLQQIVDKTIINADKDGDGRISFEEFCAVV 143

>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 51/225 (22%), Positives = 97/225 (43%), Gaps = 26/225 (11%)
Query: 93  KIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA----------------Q 136
           ++++ +  H N+I+L         +++I+E  S G L + + A                +
Sbjct: 85  EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPE 144
Query: 137 ERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEG 196
           E+       +   Q+A G+  L     +HRDL   N L     ED+ +KI DFGL+    
Sbjct: 145 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIH 201
Query: 197 YTDPVVGLFGS---IDYVSPEALLQDRITSKSDMWSLGVILY-ILLSGYPPFIAQSNRQK 252
           + D           + +++PEAL     T +SD+WS GV+L+ I   G  P+      + 
Sbjct: 202 HIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 261
Query: 253 QQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELL 297
            +++  G          N ++    ++       P++RP+ ++L+
Sbjct: 262 FKLLKEGHRM---DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 303

>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 108/243 (44%), Gaps = 47/243 (19%)
Query: 11  EYEVTDILGRGGFSVVRRGIKKTCGETNQ--VAIKTLRRIGSTTPYGFPXXXXXXXXXQI 68
           E++   +LG G F  V +G+    GE  +  VAIK LR   +T+P               
Sbjct: 16  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPKA------------- 60
Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
                             EIL    ++ +V  +P+V  L  +      V LI++L   G 
Sbjct: 61  ----------------NKEILDEAYVMASVD-NPHVCRLLGICLTST-VQLIMQLMPFGC 102
Query: 129 LFDRIVAQERYMEVGAAAVIR---QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLK 185
           L D +  +E    +G+  ++    QIA+G+  L    +VHRDL   N L    +    +K
Sbjct: 103 LLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH---VK 157
Query: 186 IMDFGLSSVEGYTDPVVGLFGS---IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GY 241
           I DFGL+ + G  +      G    I +++ E++L    T +SD+WS GV ++ L++ G 
Sbjct: 158 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 217
Query: 242 PPF 244
            P+
Sbjct: 218 KPY 220

>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 108/243 (44%), Gaps = 47/243 (19%)
Query: 11  EYEVTDILGRGGFSVVRRGIKKTCGETNQ--VAIKTLRRIGSTTPYGFPXXXXXXXXXQI 68
           E++   +LG G F  V +G+    GE  +  VAIK LR   +T+P               
Sbjct: 19  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPKA------------- 63
Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
                             EIL    ++ +V  +P+V  L  +      V LI++L   G 
Sbjct: 64  ----------------NKEILDEAYVMASVD-NPHVCRLLGICLTST-VQLIMQLMPFGC 105
Query: 129 LFDRIVAQERYMEVGAAAVIR---QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLK 185
           L D +  +E    +G+  ++    QIA+G+  L    +VHRDL   N L    +    +K
Sbjct: 106 LLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH---VK 160
Query: 186 IMDFGLSSVEGYTDPVVGLFGS---IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GY 241
           I DFGL+ + G  +      G    I +++ E++L    T +SD+WS GV ++ L++ G 
Sbjct: 161 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 220
Query: 242 PPF 244
            P+
Sbjct: 221 KPY 223

>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 67/259 (25%), Positives = 113/259 (43%), Gaps = 47/259 (18%)
Query: 11  EYEVTDILGRGGFSVVRRGIKKTCGETNQ--VAIKTLRRIGSTTPYGFPXXXXXXXXXQI 68
           E +   +LG G F  V +GI    GET +  VAIK L    +T P               
Sbjct: 16  ELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNE--TTGPK-------------- 59
Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
                      ++    +E L+M  +      HP+++ L  V      + L+ +L   G 
Sbjct: 60  -----------ANVEFMDEALIMASM-----DHPHLVRLLGVCLSPT-IQLVTQLMPHGC 102
Query: 129 LFDRIVAQERYMEVGAAAVIR---QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLK 185
           L + +   E    +G+  ++    QIA+G+  L +  +VHRDL   N L    +  + +K
Sbjct: 103 LLEYV--HEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLV---KSPNHVK 157
Query: 186 IMDFGLSS-VEGYTDPVVGLFGS--IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GY 241
           I DFGL+  +EG         G   I +++ E +   + T +SD+WS GV ++ L++ G 
Sbjct: 158 ITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGG 217
Query: 242 PPFIAQSNRQKQQMIMAGE 260
            P+     R+   ++  GE
Sbjct: 218 KPYDGIPTREIPDLLEKGE 236

>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307

Iteration: 1
 Score = 59.3 bits (142), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 104/243 (42%), Gaps = 15/243 (6%)
Query: 102 PNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQA 161
           P ++  Y  +     + + +E   GG L   +    R  E     V   + +GL  L + 
Sbjct: 64  PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 162 N-IVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF-GSIDYVSPEALLQD 219
           + I+HRD+KP N L +N R +  +K+ DFG+S      D +   F G+  Y+SPE L   
Sbjct: 124 HKIMHRDVKPSNIL-VNSRGE--IKLCDFGVSG--QLIDSMANSFVGTRSYMSPERLQGT 178
Query: 220 RITSKSDMWSLGVILYILLSGY----PPFIAQSNRQKQQMIMAGEFSFYEQTWK----NI 271
             + +SD+WS+G+ L  +  G     PP   + +R    +    ++   E   K      
Sbjct: 179 HYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPSGVF 238
Query: 272 SSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAKEEEMDAEIVSRLQSFNARRKLRA 331
           S   +  ++  L  +P  R   ++L+ H ++    A+E +    + S +          A
Sbjct: 239 SLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEEVDFAGWLCSTIGLNQPSTPTHA 298
Query: 332 AAI 334
           A +
Sbjct: 299 AGV 301

>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327

Iteration: 1
 Score = 59.3 bits (142), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 109/243 (44%), Gaps = 47/243 (19%)
Query: 11  EYEVTDILGRGGFSVVRRGIKKTCGETNQ--VAIKTLRRIGSTTPYGFPXXXXXXXXXQI 68
           E++   +LG G F  V +G+    GE  +  VAIK LR   +T+P               
Sbjct: 16  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPK-------------- 59
Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
                      ++  + +E  VM   V+N    P+V  L  +      V LI +L   G 
Sbjct: 60  -----------ANKEILDEAYVMAS-VDN----PHVCRLLGICLTST-VQLITQLMPFGX 102
Query: 129 LFDRIVAQERYMEVGAAAVIR---QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLK 185
           L D +  +E    +G+  ++    QIA+G+  L    +VHRDL   N L    +    +K
Sbjct: 103 LLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH---VK 157
Query: 186 IMDFGLSSVEGYTDPVVGLFGS---IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GY 241
           I DFGL+ + G  +      G    I +++ E++L    T +SD+WS GV ++ L++ G 
Sbjct: 158 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 217
Query: 242 PPF 244
            P+
Sbjct: 218 KPY 220

>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin B, Fkbp12 And The Immunosuppressant Drug Fk506 (tacrolimus) Length = 169

Iteration: 1
 Score = 59.3 bits (142), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 77/150 (51%), Gaps = 6/150 (4%)
Query: 356 SHDLNEEEIQNLRIHFRTICANGDNATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDG 415
           SH  + +EI+ L   F+ +  + DN+     EE +    +    PL  R+ D+FD + +G
Sbjct: 12  SH-FDADEIKRLGKRFKKL--DLDNSGSLSVEEFMSLPELQQ-NPLVQRVIDIFDTDGNG 67
Query: 416 TVDMREILCGFSSLR-KSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDI 474
            VD +E + G S    K   +  LR  F++YD+D+ G I+  E+  +L+ +  + L  D 
Sbjct: 68  EVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLK-DT 126
Query: 475 TEPGKLDEIFDLMDANNDGKVTFDEFRAAM 504
                +D+     D + DG+++F+EF A +
Sbjct: 127 QLQQIVDKTIINADKDGDGRISFEEFCAVV 156

>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC Length = 405

Iteration: 1
 Score = 59.3 bits (142), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 117/285 (41%), Gaps = 78/285 (27%)
Query: 87  EILVMRKIVENVSPHPNVIDLYDV--------------YEDQNGVHLILELCSGGELFDR 132
           EI ++R++      HPNVI L  V              Y + +  H+I +     +   +
Sbjct: 68  EIALLRELK-----HPNVISLQKVFLSHADRKVWLLFDYAEHDLWHII-KFHRASKANKK 121
Query: 133 IVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLND-REDSPLKIMDFGL 191
            V   R M     +++ QI +G+  LH   ++HRDLKP N L + +  E   +KI D G 
Sbjct: 122 PVQLPRGM---VKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF 178
Query: 192 SSVEGYT-------DPVVGLFGSIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPP 243
           + +           DPVV  F    Y +PE LL  R  +K+ D+W++G I   LL+  P 
Sbjct: 179 ARLFNSPLKPLADLDPVVVTFW---YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPI 235
Query: 244 F------IAQSN-------------------RQKQQMIMAGEFS-----FYEQTWKNIS- 272
           F      I  SN                   +  + +    E S     F   T+ N S 
Sbjct: 236 FHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSL 295
Query: 273 ------------SSAKQLISSLLTVDPNRRPSAQELLNHPWVIGD 305
                       S A  L+  LLT+DP +R ++++ +  P+ + D
Sbjct: 296 IKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLED 340

>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With Cyclosporin A And Human Cyclophilin Length = 170

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 77/150 (51%), Gaps = 6/150 (4%)
Query: 356 SHDLNEEEIQNLRIHFRTICANGDNATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDG 415
           SH  + +EI+ L   F+ +  + DN+     EE +    +    PL  R+ D+FD + +G
Sbjct: 13  SH-FDADEIKRLGKRFKKL--DLDNSGSLSVEEFMSLPELQQ-NPLVQRVIDIFDTDGNG 68
Query: 416 TVDMREILCGFSSLR-KSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDI 474
            VD +E + G S    K   +  LR  F++YD+D+ G I+  E+  +L+ +  + L  D 
Sbjct: 69  EVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLK-DT 127
Query: 475 TEPGKLDEIFDLMDANNDGKVTFDEFRAAM 504
                +D+     D + DG+++F+EF A +
Sbjct: 128 QLQQIVDKTIINADKDGDGRISFEEFCAVV 157

>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 88/195 (45%), Gaps = 17/195 (8%)
Query: 121 LELCSGGELFDRIVAQ--ERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLND 178
           +E C  G L   I  +  E+  +V A  +  QI +G+  +H   +++RDLKP N   ++ 
Sbjct: 99  MEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDT 158
Query: 179 REDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILL 238
           ++   +KI DFGL +            G++ Y+SPE +       + D+++LG+IL  LL
Sbjct: 159 KQ---VKIGDFGLVTSLKNDGKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
Query: 239 SGYPPFIAQSN--RQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
                    S      +  I++  F   E+T          L+  LL+  P  RP+  E+
Sbjct: 216 HVCDTAFETSKFFTDLRDGIISDIFDKKEKT----------LLQKLLSKKPEDRPNTSEI 265
Query: 297 LNHPWVIGDSAKEEE 311
           L    V   S ++ E
Sbjct: 266 LRTLTVWKKSPEKNE 280

>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik) Length = 371

Iteration: 1
 Score = 58.9 bits (141), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 90/201 (44%), Gaps = 9/201 (4%)
Query: 102 PNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQA 161
           P ++ LY    +   V++ +EL  GG L   +  Q    E  A   + Q  EGL  LH  
Sbjct: 145 PRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSR 204
Query: 162 NIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV---EGYTDPVVG---LFGSIDYVSPEA 215
            I+H D+K +N L  +D   S   + DFG +     +G    ++    + G+  +++PE 
Sbjct: 205 RILHGDVKADNVLLSSD--GSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEV 262
Query: 216 LLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSA 275
           +L     +K D+WS   ++  +L+G  P+  Q  R    + +A E     +   + +   
Sbjct: 263 VLGRSCDAKVDVWSSCCMMLHMLNGCHPWT-QFFRGPLCLKIASEPPPVREIPPSCAPLT 321
Query: 276 KQLISSLLTVDPNRRPSAQEL 296
            Q I   L  +P  R SA EL
Sbjct: 322 AQAIQEGLRKEPIHRVSAAEL 342

>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79 Peptide Length = 155

Iteration: 1
 Score = 58.9 bits (141), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 76/147 (51%), Gaps = 11/147 (7%)
Query: 362 EEIQNLRIHFRTI-CANGDNATLSEFEEVLKAMNMSSLV--PLAPRIFDLFDNNRDGTVD 418
           +EI+ L   F+ +   N  + ++ EF      M++  L   PL  R+ D+FD + +G VD
Sbjct: 3   DEIKRLGKRFKKLDLDNSGSLSVEEF------MSLPELQQNPLVQRVIDIFDTDGNGEVD 56
Query: 419 MREILCGFSSLR-KSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEP 477
            +E + G S    K   +  LR  F++YD+D+ G I+  E+  +L+ +  + L  D    
Sbjct: 57  FKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLK-DTQLQ 115
Query: 478 GKLDEIFDLMDANNDGKVTFDEFRAAM 504
             +D+     D + DG+++F+EF A +
Sbjct: 116 QIVDKTIINADKDGDGRISFEEFCAVV 142

>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324

Iteration: 1
 Score = 58.9 bits (141), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 54/235 (22%), Positives = 102/235 (43%), Gaps = 32/235 (13%)
Query: 84  LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRI---------- 133
           L +E+ +M+ I      H N+I L         +++I+E  S G L + +          
Sbjct: 87  LVSEMEMMKMI----GKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEY 142
Query: 134 ------VAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIM 187
                 V +E+       +   Q+A G+  L     +HRDL   N L     E++ +KI 
Sbjct: 143 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIA 199
Query: 188 DFGLS----SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILLSGYP 242
           DFGL+    +++ Y     G    + +++PEAL     T +SD+WS GV+++ I   G  
Sbjct: 200 DFGLARDINNIDYYKKTTNGRL-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 243 PFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELL 297
           P+      +  +++  G          N ++    ++       P++RP+ ++L+
Sbjct: 259 PYPGIPVEELFKLLKEGHRM---DKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310

>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324

Iteration: 1
 Score = 58.9 bits (141), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 56/234 (23%), Positives = 103/234 (44%), Gaps = 38/234 (16%)
Query: 93  KIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYM------------ 140
           KI+ ++  H N+++L         V +I E C  G+L + +  +   M            
Sbjct: 86  KIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPE 145
Query: 141 ----EVGAAAVIR-------QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDF 189
               E G    +R       Q+A+G+A L   N +HRD+   N L  N       KI DF
Sbjct: 146 GLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHV---AKIGDF 202
Query: 190 GLSSVEGYTDPVVGLFGS----IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPF 244
           GL+  +   D    + G+    + +++PE++     T +SD+WS G++L+ + S G  P+
Sbjct: 203 GLAR-DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 261
Query: 245 IAQSNRQKQQMIMAGEFSFYEQTW--KNISSSAKQLISSLLTVDPNRRPSAQEL 296
                  K   ++   +   +  +  KNI S    ++ +   ++P  RP+ Q++
Sbjct: 262 PGILVNSKFYKLVKDGYQMAQPAFAPKNIYS----IMQACWALEPTHRPTFQQI 311

>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321

Iteration: 1
 Score = 58.9 bits (141), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 67/259 (25%), Positives = 113/259 (43%), Gaps = 47/259 (18%)
Query: 11  EYEVTDILGRGGFSVVRRGIKKTCGETNQ--VAIKTLRRIGSTTPYGFPXXXXXXXXXQI 68
           E +   +LG G F  V +GI    GET +  VAIK L    +T P               
Sbjct: 39  ELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNE--TTGPK-------------- 82
Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
                      ++    +E L+M  +      HP+++ L  V      + L+ +L   G 
Sbjct: 83  -----------ANVEFMDEALIMASM-----DHPHLVRLLGVCLSPT-IQLVTQLMPHGC 125
Query: 129 LFDRIVAQERYMEVGAAAVIR---QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLK 185
           L + +   E    +G+  ++    QIA+G+  L +  +VHRDL   N L    +  + +K
Sbjct: 126 LLEYV--HEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLV---KSPNHVK 180
Query: 186 IMDFGLSS-VEGYTDPVVGLFGS--IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GY 241
           I DFGL+  +EG         G   I +++ E +   + T +SD+WS GV ++ L++ G 
Sbjct: 181 ITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGG 240
Query: 242 PPFIAQSNRQKQQMIMAGE 260
            P+     R+   ++  GE
Sbjct: 241 KPYDGIPTREIPDLLEKGE 259

>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 58.9 bits (141), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 54/235 (22%), Positives = 102/235 (43%), Gaps = 32/235 (13%)
Query: 84  LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRI---------- 133
           L +E+ +M+ I      H N+I L         +++I+E  S G L + +          
Sbjct: 87  LVSEMEMMKMI----GKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEY 142
Query: 134 ------VAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIM 187
                 V +E+       +   Q+A G+  L     +HRDL   N L     E++ +KI 
Sbjct: 143 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIA 199
Query: 188 DFGLS----SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILLSGYP 242
           DFGL+    +++ Y     G    + +++PEAL     T +SD+WS GV+++ I   G  
Sbjct: 200 DFGLARDINNIDYYKKTTNGRL-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 243 PFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELL 297
           P+      +  +++  G          N ++    ++       P++RP+ ++L+
Sbjct: 259 PYPGIPVEELFKLLKEGHRM---DKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310

>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 58.9 bits (141), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 53/235 (22%), Positives = 103/235 (43%), Gaps = 32/235 (13%)
Query: 84  LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRI---------- 133
           L +E+ +M+ I      H N+I+L         +++I+E  S G L + +          
Sbjct: 87  LVSEMEMMKMI----GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEY 142
Query: 134 ------VAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIM 187
                 V +E+       +   Q+A G+  L     +HRDL   N L     E++ ++I 
Sbjct: 143 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMRIA 199
Query: 188 DFGLS----SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILLSGYP 242
           DFGL+    +++ Y     G    + +++PEAL     T +SD+WS GV+++ I   G  
Sbjct: 200 DFGLARDINNIDYYKKTTNGRL-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 243 PFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELL 297
           P+      +  +++  G          N ++    ++       P++RP+ ++L+
Sbjct: 259 PYPGIPVEELFKLLKEGHRM---DKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310

>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354

Iteration: 1
 Score = 58.9 bits (141), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 72/144 (50%), Gaps = 8/144 (5%)
Query: 102 PNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQA 161
           P ++  Y  +     + + +E   GG L   +   +R  E     V   +  GLA L + 
Sbjct: 74  PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREK 133
Query: 162 N-IVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF-GSIDYVSPEALLQD 219
           + I+HRD+KP N L +N R +  +K+ DFG+S      D +   F G+  Y++PE L   
Sbjct: 134 HQIMHRDVKPSNIL-VNSRGE--IKLCDFGVSG--QLIDSMANSFVGTRSYMAPERLQGT 188
Query: 220 RITSKSDMWSLGVILYILLSG-YP 242
             + +SD+WS+G+ L  L  G YP
Sbjct: 189 HYSVQSDIWSMGLSLVELAVGRYP 212

>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337

Iteration: 1
 Score = 58.5 bits (140), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 107/243 (44%), Gaps = 47/243 (19%)
Query: 11  EYEVTDILGRGGFSVVRRGIKKTCGETNQ--VAIKTLRRIGSTTPYGFPXXXXXXXXXQI 68
           E++   +LG G F  V +G+    GE  +  VAIK LR   +T+P               
Sbjct: 26  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPKA------------- 70
Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
                             EIL    ++ +V  +P+V  L  +      V LI +L   G 
Sbjct: 71  ----------------NKEILDEAYVMASVD-NPHVCRLLGICLTST-VQLITQLMPFGC 112
Query: 129 LFDRIVAQERYMEVGAAAVIR---QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLK 185
           L D +  +E    +G+  ++    QIA+G+  L    +VHRDL   N L    +    +K
Sbjct: 113 LLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH---VK 167
Query: 186 IMDFGLSSVEGYTDPVVGLFGS---IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GY 241
           I DFGL+ + G  +      G    I +++ E++L    T +SD+WS GV ++ L++ G 
Sbjct: 168 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 227
Query: 242 PPF 244
            P+
Sbjct: 228 KPY 230

>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In Complex With Amp-Pnp Length = 330

Iteration: 1
 Score = 58.5 bits (140), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 109/243 (44%), Gaps = 47/243 (19%)
Query: 11  EYEVTDILGRGGFSVVRRGIKKTCGETNQ--VAIKTLRRIGSTTPYGFPXXXXXXXXXQI 68
           E++   +LG G F  V +G+    GE  +  VAIK LR   +T+P               
Sbjct: 19  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPK-------------- 62
Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
                      ++  + +E  VM   V+N    P+V  L  +      V LI +L   G 
Sbjct: 63  -----------ANKEILDEAYVMAS-VDN----PHVCRLLGICLTST-VQLITQLMPFGC 105
Query: 129 LFDRIVAQERYMEVGAAAVIR---QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLK 185
           L D +  +E    +G+  ++    QIA+G+  L    +VHRDL   N L    +    +K
Sbjct: 106 LLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH---VK 160
Query: 186 IMDFGLSSVEGYTDPVVGLFGS---IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GY 241
           I DFGL+ + G  +      G    I +++ E++L    T +SD+WS GV ++ L++ G 
Sbjct: 161 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 220
Query: 242 PPF 244
            P+
Sbjct: 221 KPY 223

>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 58.5 bits (140), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 72/158 (45%), Gaps = 13/158 (8%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE-RYMEVGAAAVIRQIAEGLAALH 159
           HPN+I L  V        ++ E    G L   +   + ++  +    ++R +  G+  L 
Sbjct: 109 HPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS 168
Query: 160 QANIVHRDLKPENCLFLNDREDSPL--KIMDFGLSSV-EGYTDPVVGLFGS---IDYVSP 213
               VHRDL   N L      DS L  K+ DFGLS V E   D      G    I + +P
Sbjct: 169 DLGYVHRDLAARNVLV-----DSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAP 223
Query: 214 EALLQDRITSKSDMWSLGVILY-ILLSGYPPFIAQSNR 250
           EA+     +S SD+WS GV+++ +L  G  P+   +NR
Sbjct: 224 EAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR 261

>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333

Iteration: 1
 Score = 58.5 bits (140), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 109/243 (44%), Gaps = 47/243 (19%)
Query: 11  EYEVTDILGRGGFSVVRRGIKKTCGETNQ--VAIKTLRRIGSTTPYGFPXXXXXXXXXQI 68
           E++   +LG G F  V +G+    GE  +  VAIK LR   +T+P               
Sbjct: 22  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPK-------------- 65
Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
                      ++  + +E  VM   V+N    P+V  L  +      V LI +L   G 
Sbjct: 66  -----------ANKEILDEAYVMAS-VDN----PHVCRLLGICLTST-VQLITQLMPFGC 108
Query: 129 LFDRIVAQERYMEVGAAAVIR---QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLK 185
           L D +  +E    +G+  ++    QIA+G+  L    +VHRDL   N L    +    +K
Sbjct: 109 LLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH---VK 163
Query: 186 IMDFGLSSVEGYTDPVVGLFGS---IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GY 241
           I DFGL+ + G  +      G    I +++ E++L    T +SD+WS GV ++ L++ G 
Sbjct: 164 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 223
Query: 242 PPF 244
            P+
Sbjct: 224 KPY 226

>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 58.5 bits (140), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 109/243 (44%), Gaps = 47/243 (19%)
Query: 11  EYEVTDILGRGGFSVVRRGIKKTCGETNQ--VAIKTLRRIGSTTPYGFPXXXXXXXXXQI 68
           E++   +LG G F  V +G+    GE  +  VAIK LR   +T+P               
Sbjct: 19  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPK-------------- 62
Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
                      ++  + +E  VM   V+N    P+V  L  +      V LI +L   G 
Sbjct: 63  -----------ANKEILDEAYVMAS-VDN----PHVCRLLGICLTST-VQLITQLMPFGC 105
Query: 129 LFDRIVAQERYMEVGAAAVIR---QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLK 185
           L D +  +E    +G+  ++    QIA+G+  L    +VHRDL   N L    +    +K
Sbjct: 106 LLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH---VK 160
Query: 186 IMDFGLSSVEGYTDPVVGLFGS---IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GY 241
           I DFGL+ + G  +      G    I +++ E++L    T +SD+WS GV ++ L++ G 
Sbjct: 161 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 220
Query: 242 PPF 244
            P+
Sbjct: 221 KPY 223

>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334

Iteration: 1
 Score = 58.5 bits (140), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 109/243 (44%), Gaps = 47/243 (19%)
Query: 11  EYEVTDILGRGGFSVVRRGIKKTCGETNQ--VAIKTLRRIGSTTPYGFPXXXXXXXXXQI 68
           E++   +LG G F  V +G+    GE  +  VAIK LR   +T+P               
Sbjct: 23  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPK-------------- 66
Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
                      ++  + +E  VM   V+N    P+V  L  +      V LI +L   G 
Sbjct: 67  -----------ANKEILDEAYVMAS-VDN----PHVCRLLGICLTST-VQLITQLMPFGC 109
Query: 129 LFDRIVAQERYMEVGAAAVIR---QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLK 185
           L D +  +E    +G+  ++    QIA+G+  L    +VHRDL   N L    +    +K
Sbjct: 110 LLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH---VK 164
Query: 186 IMDFGLSSVEGYTDPVVGLFGS---IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GY 241
           I DFGL+ + G  +      G    I +++ E++L    T +SD+WS GV ++ L++ G 
Sbjct: 165 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 224
Query: 242 PPF 244
            P+
Sbjct: 225 KPY 227

>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 58.5 bits (140), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 72/158 (45%), Gaps = 13/158 (8%)
Query: 101 HPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE-RYMEVGAAAVIRQIAEGLAALH 159
           HPN+I L  V        ++ E    G L   +   + ++  +    ++R +  G+  L 
Sbjct: 109 HPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS 168
Query: 160 QANIVHRDLKPENCLFLNDREDSPL--KIMDFGLSSV-EGYTDPVVGLFGS---IDYVSP 213
               VHRDL   N L      DS L  K+ DFGLS V E   D      G    I + +P
Sbjct: 169 DLGYVHRDLAARNVLV-----DSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAP 223
Query: 214 EALLQDRITSKSDMWSLGVILY-ILLSGYPPFIAQSNR 250
           EA+     +S SD+WS GV+++ +L  G  P+   +NR
Sbjct: 224 EAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR 261

>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330

Iteration: 1
 Score = 58.5 bits (140), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 109/243 (44%), Gaps = 47/243 (19%)
Query: 11  EYEVTDILGRGGFSVVRRGIKKTCGETNQ--VAIKTLRRIGSTTPYGFPXXXXXXXXXQI 68
           E++   +LG G F  V +G+    GE  +  VAIK LR   +T+P               
Sbjct: 19  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPK-------------- 62
Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
                      ++  + +E  VM   V+N    P+V  L  +      V LI +L   G 
Sbjct: 63  -----------ANKEILDEAYVMAS-VDN----PHVCRLLGICLTST-VQLITQLMPFGC 105
Query: 129 LFDRIVAQERYMEVGAAAVIR---QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLK 185
           L D +  +E    +G+  ++    QIA+G+  L    +VHRDL   N L    +    +K
Sbjct: 106 LLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH---VK 160
Query: 186 IMDFGLSSVEGYTDPVVGLFGS---IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GY 241
           I DFGL+ + G  +      G    I +++ E++L    T +SD+WS GV ++ L++ G 
Sbjct: 161 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 220
Query: 242 PPF 244
            P+
Sbjct: 221 KPY 223

>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327

Iteration: 1
 Score = 58.5 bits (140), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 109/243 (44%), Gaps = 47/243 (19%)
Query: 11  EYEVTDILGRGGFSVVRRGIKKTCGETNQ--VAIKTLRRIGSTTPYGFPXXXXXXXXXQI 68
           E++   +LG G F  V +G+    GE  +  VAIK LR   +T+P               
Sbjct: 16  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPK-------------- 59
Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
                      ++  + +E  VM   V+N    P+V  L  +      V LI +L   G 
Sbjct: 60  -----------ANKEILDEAYVMAS-VDN----PHVCRLLGICLTST-VQLITQLMPFGC 102
Query: 129 LFDRIVAQERYMEVGAAAVIR---QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLK 185
           L D +  +E    +G+  ++    QIA+G+  L    +VHRDL   N L    +    +K
Sbjct: 103 LLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH---VK 157
Query: 186 IMDFGLSSVEGYTDPVVGLFGS---IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GY 241
           I DFGL+ + G  +      G    I +++ E++L    T +SD+WS GV ++ L++ G 
Sbjct: 158 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 217
Query: 242 PPF 244
            P+
Sbjct: 218 KPY 220

>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 109/243 (44%), Gaps = 47/243 (19%)
Query: 11  EYEVTDILGRGGFSVVRRGIKKTCGETNQ--VAIKTLRRIGSTTPYGFPXXXXXXXXXQI 68
           E++   +LG G F  V +G+    GE  +  VAIK LR   +T+P               
Sbjct: 18  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPK-------------- 61
Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
                      ++  + +E  VM   V+N    P+V  L  +      V LI +L   G 
Sbjct: 62  -----------ANKEILDEAYVMAS-VDN----PHVCRLLGICLTST-VQLITQLMPFGC 104
Query: 129 LFDRIVAQERYMEVGAAAVIR---QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLK 185
           L D +  +E    +G+  ++    QIA+G+  L    +VHRDL   N L    +    +K
Sbjct: 105 LLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH---VK 159
Query: 186 IMDFGLSSVEGYTDPVVGLFGS---IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GY 241
           I DFGL+ + G  +      G    I +++ E++L    T +SD+WS GV ++ L++ G 
Sbjct: 160 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 219
Query: 242 PPF 244
            P+
Sbjct: 220 KPY 222

>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 107/243 (44%), Gaps = 47/243 (19%)
Query: 11  EYEVTDILGRGGFSVVRRGIKKTCGETNQ--VAIKTLRRIGSTTPYGFPXXXXXXXXXQI 68
           E++   +LG G F  V +G+    GE  +  VAIK LR   +T+P               
Sbjct: 41  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPKA------------- 85
Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
                             EIL    ++ +V  +P+V  L  +      V LI +L   G 
Sbjct: 86  ----------------NKEILDEAYVMASVD-NPHVCRLLGICLTST-VQLITQLMPFGC 127
Query: 129 LFDRIVAQERYMEVGAAAVIR---QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLK 185
           L D +  +E    +G+  ++    QIA+G+  L    +VHRDL   N L    +    +K
Sbjct: 128 LLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH---VK 182
Query: 186 IMDFGLSSVEGYTDPVVGLFGS---IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GY 241
           I DFGL+ + G  +      G    I +++ E++L    T +SD+WS GV ++ L++ G 
Sbjct: 183 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 242
Query: 242 PPF 244
            P+
Sbjct: 243 KPY 245

>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 107/243 (44%), Gaps = 47/243 (19%)
Query: 11  EYEVTDILGRGGFSVVRRGIKKTCGETNQ--VAIKTLRRIGSTTPYGFPXXXXXXXXXQI 68
           E++   +LG G F  V +G+    GE  +  VAIK LR   +T+P               
Sbjct: 10  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPKA------------- 54
Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
                             EIL    ++ +V  +P+V  L  +      V LI +L   G 
Sbjct: 55  ----------------NKEILDEAYVMASVD-NPHVCRLLGICLTST-VQLITQLMPFGC 96
Query: 129 LFDRIVAQERYMEVGAAAVIR---QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLK 185
           L D +  +E    +G+  ++    QIA+G+  L    +VHRDL   N L    +    +K
Sbjct: 97  LLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH---VK 151
Query: 186 IMDFGLSSVEGYTDPVVGLFGS---IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GY 241
           I DFGL+ + G  +      G    I +++ E++L    T +SD+WS GV ++ L++ G 
Sbjct: 152 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 211
Query: 242 PPF 244
            P+
Sbjct: 212 KPY 214

>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole Inhibitor Length = 327

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 109/243 (44%), Gaps = 47/243 (19%)
Query: 11  EYEVTDILGRGGFSVVRRGIKKTCGETNQ--VAIKTLRRIGSTTPYGFPXXXXXXXXXQI 68
           E++   +LG G F  V +G+    GE  +  VAIK LR   +T+P               
Sbjct: 16  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPK-------------- 59
Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
                      ++  + +E  VM   V+N    P+V  L  +      V LI +L   G 
Sbjct: 60  -----------ANKEILDEAYVMAS-VDN----PHVCRLLGICLTST-VQLITQLMPFGC 102
Query: 129 LFDRIVAQERYMEVGAAAVIR---QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLK 185
           L D +  +E    +G+  ++    QIA+G+  L    +VHRDL   N L    +    +K
Sbjct: 103 LLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH---VK 157
Query: 186 IMDFGLSSVEGYTDPVVGLFGS---IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GY 241
           I DFGL+ + G  +      G    I +++ E++L    T +SD+WS GV ++ L++ G 
Sbjct: 158 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 217
Query: 242 PPF 244
            P+
Sbjct: 218 KPY 220

>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin Length = 190

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 8/152 (5%)
Query: 359 LNEEEIQNLRIHFRTICANGDNATLSEFEEVLKAM-NMSSLVPLAPRIFDLFDNNRDGTV 417
            +  EIQ     F   C +G  A   +F ++ K      S    A  +F +FD + +G +
Sbjct: 22  FDRREIQQWHKGFLRDCPSGQLAR-EDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFI 80
Query: 418 DMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEE----VASMLRALPDDC-LPV 472
              E +   S+  +   ++ L   F++YD++  G IT +E    VAS+ + +     L  
Sbjct: 81  HFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNE 140
Query: 473 DITEPG-KLDEIFDLMDANNDGKVTFDEFRAA 503
           D   P  ++ +IF LMD N DG +T DEFR  
Sbjct: 141 DEATPEMRVKKIFKLMDKNEDGYITLDEFREG 172

>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/227 (23%), Positives = 100/227 (44%), Gaps = 31/227 (13%)
Query: 93  KIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIV----------------AQ 136
           KI+ ++  H N+++L         V +I E C  G+L + +                  +
Sbjct: 101 KIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPE 160
Query: 137 ERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEG 196
           E+           Q+A+G+A L   N +HRD+   N L  N       KI DFGL+  + 
Sbjct: 161 EQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHV---AKIGDFGLAR-DI 216
Query: 197 YTDPVVGLFGS----IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQ 251
             D    + G+    + +++PE++     T +SD+WS G++L+ + S G  P+       
Sbjct: 217 MNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS 276
Query: 252 KQQMIMAGEFSFYEQTW--KNISSSAKQLISSLLTVDPNRRPSAQEL 296
           K   ++   +   +  +  KNI S    ++ +   ++P  RP+ Q++
Sbjct: 277 KFYKLVKDGYQMAQPAFAPKNIYS----IMQACWALEPTHRPTFQQI 319

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 99/233 (42%), Gaps = 29/233 (12%)
Query: 102 PNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQA 161
           P ++  Y  +     + + +E   GG L   +    R  E     V   + +GL  L + 
Sbjct: 83  PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 142
Query: 162 N-IVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF-GSIDYVSPEALLQD 219
           + I+HRD+KP N L +N R +  +K+ DFG+S      D +   F G+  Y+SPE L   
Sbjct: 143 HKIMHRDVKPSNIL-VNSRGE--IKLCDFGVSG--QLIDSMANSFVGTRSYMSPERLQGT 197
Query: 220 RITSKSDMWSLGVILYILLSGYPPFIAQSN------------RQKQQMIMAGEFSFYEQT 267
             + +SD+WS+G+ L  +  G  P  + S              +    + +G FS   Q 
Sbjct: 198 HYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSGVFSLEFQD 257
Query: 268 WKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAKEEEMDAEIVSRL 320
           + N            L  +P  R   ++L+ H ++    A+E +    + S +
Sbjct: 258 FVN----------KCLIKNPAERADLKQLMVHAFIKRSDAEEVDFAGWLCSTI 300

>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/235 (22%), Positives = 102/235 (43%), Gaps = 32/235 (13%)
Query: 84  LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRI---------- 133
           L +E+ +M+ I      H N+I+L         +++I+   S G L + +          
Sbjct: 87  LVSEMEMMKMI----GKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEY 142
Query: 134 ------VAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIM 187
                 V +E+       +   Q+A G+  L     +HRDL   N L     E++ +KI 
Sbjct: 143 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIA 199
Query: 188 DFGLS----SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILLSGYP 242
           DFGL+    +++ Y     G    + +++PEAL     T +SD+WS GV+++ I   G  
Sbjct: 200 DFGLARDINNIDYYKKTTNGRL-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 243 PFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELL 297
           P+      +  +++  G          N ++    ++       P++RP+ ++L+
Sbjct: 259 PYPGIPVEELFKLLKEGHRM---DKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310

>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs Resolution) Length = 362

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 113/262 (43%), Gaps = 48/262 (18%)
Query: 79  VSDALLTNEILVMRKIVENVSPHPNVIDLYDVYED-----QNGVHLILELCS---GGELF 130
           +SD+ L   +L   +++ +   HPN++ L D++        + ++L+ EL        + 
Sbjct: 67  LSDSFLCKRVLREIRLLNHFH-HPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIH 125
Query: 131 D-RIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDF 189
           D RIV   ++++      +  I  GL  LH+A +VHRDL P N L L D  D  + I DF
Sbjct: 126 DQRIVISPQHIQY----FMYHILLGLHVLHEAGVVHRDLHPGNIL-LADNND--ITICDF 178
Query: 190 GLSSVEGYTDPVVGLFGSIDYVSPEALLQDR-ITSKSDMWSLGVILY------ILLSGYP 242
            L+  +              Y +PE ++Q +  T   DMWS G ++        L  G  
Sbjct: 179 NLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRG-S 237
Query: 243 PFIAQSNR--------QKQQMIMAGEFSFYE-----------QTWKNISSSAK----QLI 279
            F  Q N+        + + ++M    S  +           + W  +  +A      LI
Sbjct: 238 TFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLI 297
Query: 280 SSLLTVDPNRRPSAQELLNHPW 301
           + +L  +P RR S ++ L HP+
Sbjct: 298 AKMLEFNPQRRISTEQALRHPY 319

>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With Sb203580 Length = 362

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 113/262 (43%), Gaps = 48/262 (18%)
Query: 79  VSDALLTNEILVMRKIVENVSPHPNVIDLYDVYED-----QNGVHLILELCS---GGELF 130
           +SD+ L   +L   +++ +   HPN++ L D++        + ++L+ EL        + 
Sbjct: 67  LSDSFLCKRVLREIRLLNHFH-HPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIH 125
Query: 131 D-RIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDF 189
           D RIV   ++++      +  I  GL  LH+A +VHRDL P N L L D  D  + I DF
Sbjct: 126 DQRIVISPQHIQY----FMYHILLGLHVLHEAGVVHRDLHPGNIL-LADNND--ITICDF 178
Query: 190 GLSSVEGYTDPVVGLFGSIDYVSPEALLQDR-ITSKSDMWSLGVILY------ILLSGYP 242
            L+  +              Y +PE ++Q +  T   DMWS G ++        L  G  
Sbjct: 179 NLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRG-S 237
Query: 243 PFIAQSNR--------QKQQMIMAGEFSFYE-----------QTWKNISSSAK----QLI 279
            F  Q N+        + + ++M    S  +           + W  +  +A      LI
Sbjct: 238 TFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLI 297
Query: 280 SSLLTVDPNRRPSAQELLNHPW 301
           + +L  +P RR S ++ L HP+
Sbjct: 298 AKMLEFNPQRRISTEQALRHPY 319

>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 8/144 (5%)
Query: 102 PNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQA 161
           P ++  Y  +     + + +E   GG L   +    R  E     V   + +GL  L + 
Sbjct: 126 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 185
Query: 162 N-IVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF-GSIDYVSPEALLQD 219
           + I+HRD+KP N L +N R +  +K+ DFG+S      D +   F G+  Y+SPE L   
Sbjct: 186 HKIMHRDVKPSNIL-VNSRGE--IKLCDFGVSGQ--LIDSMANSFVGTRSYMSPERLQGT 240
Query: 220 RITSKSDMWSLGVILYILLSG-YP 242
             + +SD+WS+G+ L  +  G YP
Sbjct: 241 HYSVQSDIWSMGLSLVEMAVGRYP 264

>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And Kinase Domains Length = 361

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/241 (24%), Positives = 104/241 (43%), Gaps = 43/241 (17%)
Query: 11  EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGF 70
           E++   +LG G F  V +G+    GE  ++ +  +    +T+P                 
Sbjct: 50  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKA--------------- 94
Query: 71  FPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELF 130
                           EIL    ++ +V  +P+V  L  +      V LI +L   G L 
Sbjct: 95  --------------NKEILDEAYVMASVD-NPHVCRLLGICLTST-VQLITQLMPFGCLL 138
Query: 131 DRIVAQERYMEVGAAAVIR---QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIM 187
           D +  +E    +G+  ++    QIA+G+  L    +VHRDL   N L    +    +KI 
Sbjct: 139 DYV--REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH---VKIT 193
Query: 188 DFGLSSVEGYTDPVVGLFGS---IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPP 243
           DFGL+ + G  +      G    I +++ E++L    T +SD+WS GV ++ L++ G  P
Sbjct: 194 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 253
Query: 244 F 244
           +
Sbjct: 254 Y 254

>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 8/144 (5%)
Query: 102 PNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQA 161
           P ++  Y  +     + + +E   GG L   +    R  E     V   + +GL  L + 
Sbjct: 91  PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 150
Query: 162 N-IVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF-GSIDYVSPEALLQD 219
           + I+HRD+KP N L +N R +  +K+ DFG+S      D +   F G+  Y+SPE L   
Sbjct: 151 HKIMHRDVKPSNIL-VNSRGE--IKLCDFGVSG--QLIDSMANSFVGTRSYMSPERLQGT 205
Query: 220 RITSKSDMWSLGVILYILLSG-YP 242
             + +SD+WS+G+ L  +  G YP
Sbjct: 206 HYSVQSDIWSMGLSLVEMAVGRYP 229

>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain (G719sT790M) IN The Apo Form Length = 334

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 109/243 (44%), Gaps = 47/243 (19%)
Query: 11  EYEVTDILGRGGFSVVRRGIKKTCGETNQ--VAIKTLRRIGSTTPYGFPXXXXXXXXXQI 68
           E++   +L  G F  V +G+    GE  +  VAIK LR   +T+P               
Sbjct: 23  EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPK-------------- 66
Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
                      ++  + +E  VM   V+N    P+V  L  +      V LI++L   G 
Sbjct: 67  -----------ANKEILDEAYVMAS-VDN----PHVCRLLGICLTST-VQLIMQLMPFGC 109
Query: 129 LFDRIVAQERYMEVGAAAVIR---QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLK 185
           L D +  +E    +G+  ++    QIA+G+  L    +VHRDL   N L    +    +K
Sbjct: 110 LLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH---VK 164
Query: 186 IMDFGLSSVEGYTDPVVGLFGS---IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GY 241
           I DFGL+ + G  +      G    I +++ E++L    T +SD+WS GV ++ L++ G 
Sbjct: 165 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 224
Query: 242 PPF 244
            P+
Sbjct: 225 KPY 227

>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The Gefitinib/erlotinib Resistant Egfr Kinase Domain L858r+t790m Length = 329

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 109/243 (44%), Gaps = 47/243 (19%)
Query: 11  EYEVTDILGRGGFSVVRRGIKKTCGETNQ--VAIKTLRRIGSTTPYGFPXXXXXXXXXQI 68
           E++   +LG G F  V +G+    GE  +  VAIK LR   +T+P               
Sbjct: 18  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPK-------------- 61
Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
                      ++  + +E  VM   V+N    P+V  L  +      V LI++L   G 
Sbjct: 62  -----------ANKEILDEAYVMAS-VDN----PHVCRLLGICLTST-VQLIMQLMPFGC 104
Query: 129 LFDRIVAQERYMEVGAAAVIR---QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLK 185
           L D +  +E    +G+  ++    QIA+G+  L    +VHRDL   N L    +    +K
Sbjct: 105 LLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH---VK 159
Query: 186 IMDFGLSSVEGYTDPVVGLFGS---IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GY 241
           I DFG + + G  +      G    I +++ E++L    T +SD+WS GV ++ L++ G 
Sbjct: 160 ITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 219
Query: 242 PPF 244
            P+
Sbjct: 220 KPY 222

>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285 Length = 331

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 109/243 (44%), Gaps = 47/243 (19%)
Query: 11  EYEVTDILGRGGFSVVRRGIKKTCGETNQ--VAIKTLRRIGSTTPYGFPXXXXXXXXXQI 68
           E++   +LG G F  V +G+    GE  +  VAIK LR   +T+P               
Sbjct: 20  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPK-------------- 63
Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
                      ++  + +E  VM   V+N    P+V  L  +      V LI++L   G 
Sbjct: 64  -----------ANKEILDEAYVMAS-VDN----PHVCRLLGICLTST-VQLIMQLMPFGC 106
Query: 129 LFDRIVAQERYMEVGAAAVIR---QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLK 185
           L D +  +E    +G+  ++    QIA+G+  L    +VHRDL   N L    +    +K
Sbjct: 107 LLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH---VK 161
Query: 186 IMDFGLSSVEGYTDPVVGLFGS---IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GY 241
           I DFG + + G  +      G    I +++ E++L    T +SD+WS GV ++ L++ G 
Sbjct: 162 ITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 221
Query: 242 PPF 244
            P+
Sbjct: 222 KPY 224

>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 111/254 (43%), Gaps = 38/254 (14%)
Query: 17  ILGRGGFSVVRRG-IKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFFPTRK 75
           ILG G F  V  G +K+  G + +VA+KT++   S+               +I  F + +
Sbjct: 41  ILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQ-------------REIEEFLS-E 86
Query: 76  QVSVSDALLTNEILVMRKIVENVS---PHPNVIDLYDVYEDQNGVHLILELCSGGELFDR 132
              + D    N I ++   +E  S   P P VI  +  Y D   +H  L       L+ R
Sbjct: 87  AACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGD---LHTYL-------LYSR 136
Query: 133 IVAQERYMEVGAA-AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGL 191
           +    +++ +      +  IA G+  L   N +HRDL   NC+    R+D  + + DFGL
Sbjct: 137 LETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCML---RDDMTVCVADFGL 193
Query: 192 S----SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILLSGYPPFIA 246
           S    S + Y    +     + +++ E+L     TSKSD+W+ GV ++ I   G  P+  
Sbjct: 194 SKKIYSGDYYRQGRIAKM-PVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPG 252
Query: 247 QSNRQKQQMIMAGE 260
             N +    ++ G 
Sbjct: 253 VQNHEMYDYLLHGH 266

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 72/154 (46%), Gaps = 16/154 (10%)
Query: 117 VHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLF 175
           + LI+E    G L D + A  ER   +       QI +G+  L     +HRDL   N L 
Sbjct: 91  LKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV 150
Query: 176 LNDREDSPLKIMDFGLSSV--EGYTDPVVGLFGS--IDYVSPEALLQDRITSKSDMWSLG 231
            N+     +KI DFGL+ V  +      V   G   I + +PE+L + + +  SD+WS G
Sbjct: 151 ENENR---VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFG 207
Query: 232 VILYILL-----SGYPP--FIAQSNRQKQ-QMIM 257
           V+LY L      S  PP  F+      KQ QMI+
Sbjct: 208 VVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 241

>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain Length = 332

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 89/198 (44%), Gaps = 26/198 (13%)
Query: 117 VHLILELCSGGELFD----RIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPEN 172
           +++ ++LC    L D    R   ++R   V     I QIAE +  LH   ++HRDLKP N
Sbjct: 136 LYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFI-QIAEAVEFLHSKGLMHRDLKPSN 194
Query: 173 CLFLNDREDSPLKIMDFGLSSV-------EGYTDPV------VGLFGSIDYVSPEALLQD 219
             F     D  +K+ DFGL +        +    P+       G  G+  Y+SPE +  +
Sbjct: 195 IFFTM---DDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGN 251
Query: 220 RITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLI 279
             + K D++SLG+IL+ LL  +      +  ++ ++I       +   +         ++
Sbjct: 252 NYSHKVDIFSLGLILFELLYSF-----STQMERVRIITDVRNLKFPLLFTQKYPQEHMMV 306
Query: 280 SSLLTVDPNRRPSAQELL 297
             +L+  P  RP A +++
Sbjct: 307 QDMLSPSPTERPEATDII 324

>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In Complex With Mig6 Peptide Length = 329

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 109/243 (44%), Gaps = 47/243 (19%)
Query: 11  EYEVTDILGRGGFSVVRRGIKKTCGETNQ--VAIKTLRRIGSTTPYGFPXXXXXXXXXQI 68
           E++   +LG G F  V +G+    GE  +  VAIK LR   +T+P               
Sbjct: 18  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPK-------------- 61
Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
                      ++  + +E  VM   V+N    P+V  L  +      V LI++L   G 
Sbjct: 62  -----------ANKEILDEAYVMAS-VDN----PHVCRLLGICLTST-VQLIMQLMPFGC 104
Query: 129 LFDRIVAQERYMEVGAAAVIR---QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLK 185
           L D +  +E    +G+  ++    QIA+G+  L    +VHRDL   N L    +    +K
Sbjct: 105 LLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH---VK 159
Query: 186 IMDFGLSSVEGYTDPVVGLFGS---IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GY 241
           I DFG + + G  +      G    I +++ E++L    T +SD+WS GV ++ L++ G 
Sbjct: 160 ITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 219
Query: 242 PPF 244
            P+
Sbjct: 220 KPY 222

>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/235 (22%), Positives = 102/235 (43%), Gaps = 32/235 (13%)
Query: 84  LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRI---------- 133
           L +E+ +M+ I      H N+I+L         +++I+   S G L + +          
Sbjct: 87  LVSEMEMMKMI----GKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEY 142
Query: 134 ------VAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIM 187
                 V +E+       +   Q+A G+  L     +HRDL   N L     E++ +KI 
Sbjct: 143 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIA 199
Query: 188 DFGLS----SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILLSGYP 242
           DFGL+    +++ Y     G    + +++PEAL     T +SD+WS GV+++ I   G  
Sbjct: 200 DFGLARDINNIDYYKKTTNGRL-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 243 PFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELL 297
           P+      +  +++  G          N ++    ++       P++RP+ ++L+
Sbjct: 259 PYPGIPVEELFKLLKEGHRM---DKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310

>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine- Phosphorylation-Regulated Kinase 1a Length = 382

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 106/249 (42%), Gaps = 52/249 (20%)
Query: 7   KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXX 66
           K  D YE+  ++G+G F  V +   +   E   VAIK ++   +                
Sbjct: 51  KWMDRYEIDSLIGKGSFGQVVKAYDRV--EQEWVAIKIIKNKKA---------------- 92
Query: 67  QIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQ-----NGVHLIL 121
               F  + Q+ V             +++E ++ H   +  Y V+  +     N + L+ 
Sbjct: 93  ----FLNQAQIEV-------------RLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVF 135
Query: 122 ELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLA------ALHQANIVHRDLKPENCLF 175
           E+ S   L+D ++    +  V +  + R+ A+ +       A  + +I+H DLKPEN L 
Sbjct: 136 EMLSYN-LYD-LLRNTNFRGV-SLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILL 192
Query: 176 LNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY 235
            N +  S +KI+DFG S   G    +     S  Y SPE LL        DMWSLG IL 
Sbjct: 193 CNPKR-SAIKIVDFGSSCQLG--QRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILV 249
Query: 236 ILLSGYPPF 244
            + +G P F
Sbjct: 250 EMHTGEPLF 258

>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX Length = 368

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 106/249 (42%), Gaps = 52/249 (20%)
Query: 7   KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXX 66
           K  D YE+  ++G+G F  V +   +   E   VAIK ++   +                
Sbjct: 32  KWMDRYEIDSLIGKGSFGQVVKAYDRV--EQEWVAIKIIKNKKA---------------- 73
Query: 67  QIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQ-----NGVHLIL 121
               F  + Q+ V             +++E ++ H   +  Y V+  +     N + L+ 
Sbjct: 74  ----FLNQAQIEV-------------RLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVF 116
Query: 122 ELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLA------ALHQANIVHRDLKPENCLF 175
           E+ S   L+D ++    +  V +  + R+ A+ +       A  + +I+H DLKPEN L 
Sbjct: 117 EMLSY-NLYD-LLRNTNFRGV-SLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILL 173
Query: 176 LNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY 235
            N +  S +KI+DFG S   G    +     S  Y SPE LL        DMWSLG IL 
Sbjct: 174 CNPKR-SAIKIVDFGSSCQLG--QRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILV 230
Query: 236 ILLSGYPPF 244
            + +G P F
Sbjct: 231 EMHTGEPLF 239

>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase In Yeast Length = 373

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/267 (24%), Positives = 115/267 (43%), Gaps = 67/267 (25%)
Query: 103 NVIDLYDVYEDQ--NGVHLILELCSGGELFDRIVAQERYMEVGAAAV-IRQIAE----GL 155
           +++ L D +  +  NGVH+++     GE  + +   ++Y   G   + ++QI++    GL
Sbjct: 87  HILKLLDHFNHKGPNGVHVVMVFEVLGE--NLLALIKKYEHRGIPLIYVKQISKQLLLGL 144
Query: 156 AALHQ-ANIVHRDLKPENCLFLNDREDSP-----LKIMDFGLSSV--EGYTDPVVGLFGS 207
             +H+   I+H D+KPEN L   +  DSP     +KI D G +    E YT+ +     +
Sbjct: 145 DYMHRRCGIIHTDIKPENVLM--EIVDSPENLIQIKIADLGNACWYDEHYTNSI----QT 198
Query: 208 IDYVSPEALLQDRITSKSDMWSLGVILYILLSG---YPP-----FIAQSNRQKQQMIMAG 259
            +Y SPE LL       +D+WS   +++ L++G   + P     +    +   Q + + G
Sbjct: 199 REYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLG 258
Query: 260 EFSFY---------------------------------EQTWKNISSSAKQL---ISSLL 283
           E   Y                                  + +K     AK++   +S +L
Sbjct: 259 ELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPML 318
Query: 284 TVDPNRRPSAQELLNHPWVIGDSAKEE 310
            +DP +R  A  L+NHPW+      EE
Sbjct: 319 QLDPRKRADAGGLVNHPWLKDTLGMEE 345

>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C-kit Tyrosine Kinase Length = 313

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 78/153 (50%), Gaps = 11/153 (7%)
Query: 150 QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS-SVEGYTDPVVGLFG-- 206
           Q+A+G+A L   N +HRDL   N L  + R     KI DFGL+  ++  ++ VV      
Sbjct: 153 QVAKGMAFLASKNCIHRDLAARNILLTHGRIT---KICDFGLARDIKNDSNYVVKGNARL 209
Query: 207 SIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQK-QQMIMAGEFSFY 264
            + +++PE++     T +SD+WS G+ L+ L S G  P+       K  +MI  G   F 
Sbjct: 210 PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEG---FR 266
Query: 265 EQTWKNISSSAKQLISSLLTVDPNRRPSAQELL 297
             + ++  +    ++ +    DP +RP+ ++++
Sbjct: 267 MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIV 299

>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 82/182 (45%), Gaps = 29/182 (15%)
Query: 84  LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRI---------- 133
           L +E+ +M+ I      H N+I+L         +++I+E  S G L + +          
Sbjct: 87  LVSEMEMMKMI----GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEX 142
Query: 134 ------VAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIM 187
                 V +E+       +   Q+A G+  L     +HRDL   N L     E++ +KI 
Sbjct: 143 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIA 199
Query: 188 DFGLS----SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILLSGYP 242
           DFGL+    +++       G    + +++PEAL     T +SD+WS GV+++ I   G  
Sbjct: 200 DFGLARDINNIDXXKKTTNGRL-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 243 PF 244
           P+
Sbjct: 259 PY 260

>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 8/144 (5%)
Query: 102 PNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQA 161
           P ++  Y  +     + + +E   GG L   +    R  E     V   + +GL  L + 
Sbjct: 64  PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 162 N-IVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF-GSIDYVSPEALLQD 219
           + I+HRD+KP N L +N R +  +K+ DFG+S      D +   F G+  Y+SPE L   
Sbjct: 124 HKIMHRDVKPSNIL-VNSRGE--IKLCDFGVSG--QLIDSMANSFVGTRSYMSPERLQGT 178
Query: 220 RITSKSDMWSLGVILYILLSG-YP 242
             + +SD+WS+G+ L  +  G YP
Sbjct: 179 HYSVQSDIWSMGLSLVEMAVGRYP 202

>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex Length = 329

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 78/153 (50%), Gaps = 11/153 (7%)
Query: 150 QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS-SVEGYTDPVVGLFG-- 206
           Q+A+G+A L   N +HRDL   N L  + R     KI DFGL+  ++  ++ VV      
Sbjct: 169 QVAKGMAFLASKNCIHRDLAARNILLTHGRIT---KICDFGLARDIKNDSNYVVKGNARL 225
Query: 207 SIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQK-QQMIMAGEFSFY 264
            + +++PE++     T +SD+WS G+ L+ L S G  P+       K  +MI  G   F 
Sbjct: 226 PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEG---FR 282
Query: 265 EQTWKNISSSAKQLISSLLTVDPNRRPSAQELL 297
             + ++  +    ++ +    DP +RP+ ++++
Sbjct: 283 MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIV 315

>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With Bound Adp Length = 373

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/267 (24%), Positives = 115/267 (43%), Gaps = 67/267 (25%)
Query: 103 NVIDLYDVYEDQ--NGVHLILELCSGGELFDRIVAQERYMEVGAAAV-IRQIAE----GL 155
           +++ L D +  +  NGVH+++     GE  + +   ++Y   G   + ++QI++    GL
Sbjct: 87  HILKLLDHFNHKGPNGVHVVMVFEVLGE--NLLALIKKYEHRGIPLIYVKQISKQLLLGL 144
Query: 156 AALHQ-ANIVHRDLKPENCLFLNDREDSP-----LKIMDFGLSSV--EGYTDPVVGLFGS 207
             +H+   I+H D+KPEN L   +  DSP     +KI D G +    E YT+ +     +
Sbjct: 145 DYMHRRCGIIHTDIKPENVLM--EIVDSPENLIQIKIADLGNACWYDEHYTNSI----QT 198
Query: 208 IDYVSPEALLQDRITSKSDMWSLGVILYILLSG---YPP-----FIAQSNRQKQQMIMAG 259
            +Y SPE LL       +D+WS   +++ L++G   + P     +    +   Q + + G
Sbjct: 199 REYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLG 258
Query: 260 EFSFY---------------------------------EQTWKNISSSAKQL---ISSLL 283
           E   Y                                  + +K     AK++   +S +L
Sbjct: 259 ELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPML 318
Query: 284 TVDPNRRPSAQELLNHPWVIGDSAKEE 310
            +DP +R  A  L+NHPW+      EE
Sbjct: 319 QLDPRKRADAGGLVNHPWLKDTLGMEE 345

>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 82/182 (45%), Gaps = 29/182 (15%)
Query: 84  LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRI---------- 133
           L +E+ +M+ I      H N+I+L         +++I+E  S G L + +          
Sbjct: 87  LVSEMEMMKMI----GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEY 142
Query: 134 ------VAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIM 187
                 V +E+       +   Q+A G+  L     +HRDL   N L     E++ +KI 
Sbjct: 143 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIA 199
Query: 188 DFGLS----SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILLSGYP 242
           DFGL+    +++       G    + +++PEAL     T +SD+WS GV+++ I   G  
Sbjct: 200 DFGLARDINNIDXXKKTTNGRL-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 243 PF 244
           P+
Sbjct: 259 PY 260

>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 97/241 (40%), Gaps = 41/241 (17%)
Query: 18  LGRGGFSVVRRG-IKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFFPTRKQ 76
           LG G F VVRRG      G+T  VA+K L+    + P                       
Sbjct: 20  LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPE---------------------- 57
Query: 77  VSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ 136
            ++ D     E+  M  +      H N+I LY V      + ++ EL   G L DR+   
Sbjct: 58  -AMDD--FIREVNAMHSL-----DHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKH 108
Query: 137 ERYMEVGAAA-VIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVE 195
           + +  +G  +    Q+AEG+  L     +HRDL   N L L  R+   +KI DFGL    
Sbjct: 109 QGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARN-LLLATRD--LVKIGDFGLMRAL 165
Query: 196 GYTDPVVGLFGS----IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNR 250
              D    +         + +PE+L     +  SD W  GV L+ + + G  P+I  +  
Sbjct: 166 PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS 225
Query: 251 Q 251
           Q
Sbjct: 226 Q 226

>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 8/144 (5%)
Query: 102 PNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQA 161
           P ++  Y  +     + + +E   GG L   +    R  E     V   + +GL  L + 
Sbjct: 64  PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 162 N-IVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF-GSIDYVSPEALLQD 219
           + I+HRD+KP N L +N R +  +K+ DFG+S      D +   F G+  Y+SPE L   
Sbjct: 124 HKIMHRDVKPSNIL-VNSRGE--IKLCDFGVSG--QLIDSMANSFVGTRSYMSPERLQGT 178
Query: 220 RITSKSDMWSLGVILYILLSG-YP 242
             + +SD+WS+G+ L  +  G YP
Sbjct: 179 HYSVQSDIWSMGLSLVEMAVGRYP 202

>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 99/241 (41%), Gaps = 41/241 (17%)
Query: 18  LGRGGFSVVRRG-IKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFFPTRKQ 76
           LG G F VVRRG      G+T  VA+K L+    + P                       
Sbjct: 26  LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPE---------------------- 63
Query: 77  VSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ 136
            ++ D     E+  M  +      H N+I LY V      + ++ EL   G L DR+   
Sbjct: 64  -AMDD--FIREVNAMHSL-----DHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKH 114
Query: 137 ERYMEVGAAA-VIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVE 195
           + +  +G  +    Q+AEG+  L     +HRDL   N L L  R+   +KI DFGL    
Sbjct: 115 QGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARN-LLLATRD--LVKIGDFGLMRAL 171
Query: 196 GYTD--PVVGLFGSID--YVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNR 250
              D   V+     +   + +PE+L     +  SD W  GV L+ + + G  P+I  +  
Sbjct: 172 PQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS 231
Query: 251 Q 251
           Q
Sbjct: 232 Q 232

>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 8/144 (5%)
Query: 102 PNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQA 161
           P ++  Y  +     + + +E   GG L   +    R  E     V   + +GL  L + 
Sbjct: 64  PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 162 N-IVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF-GSIDYVSPEALLQD 219
           + I+HRD+KP N L +N R +  +K+ DFG+S      D +   F G+  Y+SPE L   
Sbjct: 124 HKIMHRDVKPSNIL-VNSRGE--IKLCDFGVSG--QLIDSMANSFVGTRSYMSPERLQGT 178
Query: 220 RITSKSDMWSLGVILYILLSG-YP 242
             + +SD+WS+G+ L  +  G YP
Sbjct: 179 HYSVQSDIWSMGLSLVEMAVGRYP 202

>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 8/144 (5%)
Query: 102 PNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQA 161
           P ++  Y  +     + + +E   GG L   +    R  E     V   + +GL  L + 
Sbjct: 64  PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 162 N-IVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF-GSIDYVSPEALLQD 219
           + I+HRD+KP N L +N R +  +K+ DFG+S      D +   F G+  Y+SPE L   
Sbjct: 124 HKIMHRDVKPSNIL-VNSRGE--IKLCDFGVSG--QLIDSMANSFVGTRSYMSPERLQGT 178
Query: 220 RITSKSDMWSLGVILYILLSG-YP 242
             + +SD+WS+G+ L  +  G YP
Sbjct: 179 HYSVQSDIWSMGLSLVEMAVGRYP 202

>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 78/153 (50%), Gaps = 11/153 (7%)
Query: 150 QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS-SVEGYTDPVVGLFG-- 206
           Q+A+G+A L   N +HRDL   N L  + R     KI DFGL+  ++  ++ VV      
Sbjct: 176 QVAKGMAFLASKNCIHRDLAARNILLTHGRIT---KICDFGLARHIKNDSNYVVKGNARL 232
Query: 207 SIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQK-QQMIMAGEFSFY 264
            + +++PE++     T +SD+WS G+ L+ L S G  P+       K  +MI  G   F 
Sbjct: 233 PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEG---FR 289
Query: 265 EQTWKNISSSAKQLISSLLTVDPNRRPSAQELL 297
             + ++  +    ++ +    DP +RP+ ++++
Sbjct: 290 MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIV 322

>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C- Kit Tyrosine Kinase Length = 331

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 78/153 (50%), Gaps = 11/153 (7%)
Query: 150 QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS-SVEGYTDPVVGLFG-- 206
           Q+A+G+A L   N +HRDL   N L  + R     KI DFGL+  ++  ++ VV      
Sbjct: 171 QVAKGMAFLASKNCIHRDLAARNILLTHGRIT---KICDFGLARDIKNDSNYVVKGNARL 227
Query: 207 SIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQK-QQMIMAGEFSFY 264
            + +++PE++     T +SD+WS G+ L+ L S G  P+       K  +MI  G   F 
Sbjct: 228 PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEG---FR 284
Query: 265 EQTWKNISSSAKQLISSLLTVDPNRRPSAQELL 297
             + ++  +    ++ +    DP +RP+ ++++
Sbjct: 285 MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIV 317

>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 78/153 (50%), Gaps = 11/153 (7%)
Query: 150 QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS-SVEGYTDPVVGLFG-- 206
           Q+A+G+A L   N +HRDL   N L  + R     KI DFGL+  ++  ++ VV      
Sbjct: 176 QVAKGMAFLASKNCIHRDLAARNILLTHGRIT---KICDFGLARDIKNDSNYVVKGNARL 232
Query: 207 SIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQK-QQMIMAGEFSFY 264
            + +++PE++     T +SD+WS G+ L+ L S G  P+       K  +MI  G   F 
Sbjct: 233 PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEG---FR 289
Query: 265 EQTWKNISSSAKQLISSLLTVDPNRRPSAQELL 297
             + ++  +    ++ +    DP +RP+ ++++
Sbjct: 290 MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIV 322

>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 97/241 (40%), Gaps = 41/241 (17%)
Query: 18  LGRGGFSVVRRG-IKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFFPTRKQ 76
           LG G F VVRRG      G+T  VA+K L+    + P                       
Sbjct: 20  LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPE---------------------- 57
Query: 77  VSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ 136
            ++ D     E+  M  +      H N+I LY V      + ++ EL   G L DR+   
Sbjct: 58  -AMDD--FIREVNAMHSL-----DHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKH 108
Query: 137 ERYMEVGAAA-VIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVE 195
           + +  +G  +    Q+AEG+  L     +HRDL   N L L  R+   +KI DFGL    
Sbjct: 109 QGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARN-LLLATRD--LVKIGDFGLMRAL 165
Query: 196 GYTDPVVGLFGS----IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNR 250
              D    +         + +PE+L     +  SD W  GV L+ + + G  P+I  +  
Sbjct: 166 PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS 225
Query: 251 Q 251
           Q
Sbjct: 226 Q 226

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 8/144 (5%)
Query: 102 PNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQA 161
           P ++  Y  +     + + +E   GG L   +    R  E     V   + +GL  L + 
Sbjct: 67  PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 126
Query: 162 N-IVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF-GSIDYVSPEALLQD 219
           + I+HRD+KP N L +N R +  +K+ DFG+S      D +   F G+  Y+SPE L   
Sbjct: 127 HKIMHRDVKPSNIL-VNSRGE--IKLCDFGVSG--QLIDEMANEFVGTRSYMSPERLQGT 181
Query: 220 RITSKSDMWSLGVILYILLSG-YP 242
             + +SD+WS+G+ L  +  G YP
Sbjct: 182 HYSVQSDIWSMGLSLVEMAVGRYP 205

>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 97/241 (40%), Gaps = 41/241 (17%)
Query: 18  LGRGGFSVVRRG-IKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFFPTRKQ 76
           LG G F VVRRG      G+T  VA+K L+    + P                       
Sbjct: 26  LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPE---------------------- 63
Query: 77  VSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ 136
            ++ D     E+  M  +      H N+I LY V      + ++ EL   G L DR+   
Sbjct: 64  -AMDD--FIREVNAMHSL-----DHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKH 114
Query: 137 ERYMEVGAAA-VIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVE 195
           + +  +G  +    Q+AEG+  L     +HRDL   N L L  R+   +KI DFGL    
Sbjct: 115 QGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARN-LLLATRD--LVKIGDFGLMRAL 171
Query: 196 GYTDPVVGLFGS----IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNR 250
              D    +         + +PE+L     +  SD W  GV L+ + + G  P+I  +  
Sbjct: 172 PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS 231
Query: 251 Q 251
           Q
Sbjct: 232 Q 232

>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 99/241 (41%), Gaps = 41/241 (17%)
Query: 18  LGRGGFSVVRRG-IKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFFPTRKQ 76
           LG G F VVRRG      G+T  VA+K L+    + P                       
Sbjct: 16  LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPE---------------------- 53
Query: 77  VSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ 136
            ++ D     E+  M  +      H N+I LY V      + ++ EL   G L DR+   
Sbjct: 54  -AMDD--FIREVNAMHSL-----DHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKH 104
Query: 137 ERYMEVGAAA-VIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVE 195
           + +  +G  +    Q+AEG+  L     +HRDL   N L L  R+   +KI DFGL    
Sbjct: 105 QGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARN-LLLATRD--LVKIGDFGLMRAL 161
Query: 196 GYTD--PVVGLFGSID--YVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNR 250
              D   V+     +   + +PE+L     +  SD W  GV L+ + + G  P+I  +  
Sbjct: 162 PQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS 221
Query: 251 Q 251
           Q
Sbjct: 222 Q 222

>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) Bound To A 2-(aminothiazoly)phenol (cmp2) Length = 336

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 89/201 (44%), Gaps = 9/201 (4%)
Query: 102 PNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQA 161
           P ++ LY    +   V++ +EL  GG L   I       E  A   + Q  EGL  LH  
Sbjct: 110 PRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTR 169
Query: 162 NIVHRDLKPENCLFLNDREDSPLKIMDFGLS---SVEGYTDPVVG---LFGSIDYVSPEA 215
            I+H D+K +N L  +D   S   + DFG +     +G    ++    + G+  +++PE 
Sbjct: 170 RILHGDVKADNVLLSSD--GSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV 227
Query: 216 LLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSA 275
           ++     +K D+WS   ++  +L+G  P+  Q  R    + +A E     +   + +   
Sbjct: 228 VMGKPCDAKVDIWSSCCMMLHMLNGCHPW-TQYFRGPLCLKIASEPPPIREIPPSCAPLT 286
Query: 276 KQLISSLLTVDPNRRPSAQEL 296
            Q I   L  +P  R SA EL
Sbjct: 287 AQAIQEGLRKEPVHRASAMEL 307

>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 97/241 (40%), Gaps = 41/241 (17%)
Query: 18  LGRGGFSVVRRG-IKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFFPTRKQ 76
           LG G F VVRRG      G+T  VA+K L+    + P                       
Sbjct: 16  LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPE---------------------- 53
Query: 77  VSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ 136
            ++ D     E+  M  +      H N+I LY V      + ++ EL   G L DR+   
Sbjct: 54  -AMDD--FIREVNAMHSL-----DHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKH 104
Query: 137 ERYMEVGAAA-VIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVE 195
           + +  +G  +    Q+AEG+  L     +HRDL   N L L  R+   +KI DFGL    
Sbjct: 105 QGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARN-LLLATRD--LVKIGDFGLMRAL 161
Query: 196 GYTDPVVGLFGS----IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNR 250
              D    +         + +PE+L     +  SD W  GV L+ + + G  P+I  +  
Sbjct: 162 PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS 221
Query: 251 Q 251
           Q
Sbjct: 222 Q 222

>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 97/241 (40%), Gaps = 41/241 (17%)
Query: 18  LGRGGFSVVRRG-IKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXXQIGFFPTRKQ 76
           LG G F VVRRG      G+T  VA+K L+    + P                       
Sbjct: 16  LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPE---------------------- 53
Query: 77  VSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ 136
            ++ D     E+  M  +      H N+I LY V      + ++ EL   G L DR+   
Sbjct: 54  -AMDD--FIREVNAMHSL-----DHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKH 104
Query: 137 ERYMEVGAAA-VIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVE 195
           + +  +G  +    Q+AEG+  L     +HRDL   N L L  R+   +KI DFGL    
Sbjct: 105 QGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARN-LLLATRD--LVKIGDFGLMRAL 161
Query: 196 GYTDPVVGLFGS----IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNR 250
              D    +         + +PE+L     +  SD W  GV L+ + + G  P+I  +  
Sbjct: 162 PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS 221
Query: 251 Q 251
           Q
Sbjct: 222 Q 222

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 72/155 (46%), Gaps = 18/155 (11%)
Query: 117 VHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLF 175
           + LI+E    G L D +   +ER   +       QI +G+  L     +HRDL   N L 
Sbjct: 88  LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV 147
Query: 176 LNDREDSPLKIMDFGLSSV-----EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSL 230
            N+     +KI DFGL+ V     E +     G    I + +PE+L + + +  SD+WS 
Sbjct: 148 ENENR---VKIGDFGLTKVLPQDKEFFKVKEPGE-SPIFWYAPESLTESKFSVASDVWSF 203
Query: 231 GVILYILL-----SGYPP--FIAQSNRQKQ-QMIM 257
           GV+LY L      S  PP  F+      KQ QMI+
Sbjct: 204 GVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 238

>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase (nik) Length = 352

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 89/201 (44%), Gaps = 9/201 (4%)
Query: 102 PNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQA 161
           P ++ LY    +   V++ +EL  GG L   I       E  A   + Q  EGL  LH  
Sbjct: 126 PRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTR 185
Query: 162 NIVHRDLKPENCLFLNDREDSPLKIMDFGLS---SVEGYTDPVVG---LFGSIDYVSPEA 215
            I+H D+K +N L  +D   S   + DFG +     +G    ++    + G+  +++PE 
Sbjct: 186 RILHGDVKADNVLLSSD--GSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV 243
Query: 216 LLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSA 275
           ++     +K D+WS   ++  +L+G  P+  Q  R    + +A E     +   + +   
Sbjct: 244 VMGKPCDAKVDIWSSCCMMLHMLNGCHPW-TQYFRGPLCLKIASEPPPIREIPPSCAPLT 302
Query: 276 KQLISSLLTVDPNRRPSAQEL 296
            Q I   L  +P  R SA EL
Sbjct: 303 AQAIQEGLRKEPVHRASAMEL 323

>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3) Length = 350

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 89/201 (44%), Gaps = 9/201 (4%)
Query: 102 PNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQA 161
           P ++ LY    +   V++ +EL  GG L   I       E  A   + Q  EGL  LH  
Sbjct: 124 PRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTR 183
Query: 162 NIVHRDLKPENCLFLNDREDSPLKIMDFGLS---SVEGYTDPVVG---LFGSIDYVSPEA 215
            I+H D+K +N L  +D   S   + DFG +     +G    ++    + G+  +++PE 
Sbjct: 184 RILHGDVKADNVLLSSD--GSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV 241
Query: 216 LLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSA 275
           ++     +K D+WS   ++  +L+G  P+  Q  R    + +A E     +   + +   
Sbjct: 242 VMGKPCDAKVDIWSSCCMMLHMLNGCHPW-TQYFRGPLCLKIASEPPPIREIPPSCAPLT 300
Query: 276 KQLISSLLTVDPNRRPSAQEL 296
            Q I   L  +P  R SA EL
Sbjct: 301 AQAIQEGLRKEPVHRASAMEL 321

>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s) Length = 334

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 108/243 (44%), Gaps = 47/243 (19%)
Query: 11  EYEVTDILGRGGFSVVRRGIKKTCGETNQ--VAIKTLRRIGSTTPYGFPXXXXXXXXXQI 68
           E++   +L  G F  V +G+    GE  +  VAIK LR   +T+P               
Sbjct: 23  EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPK-------------- 66
Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
                      ++  + +E  VM   V+N    P+V  L  +      V LI +L   G 
Sbjct: 67  -----------ANKEILDEAYVMAS-VDN----PHVCRLLGICLTST-VQLITQLMPFGC 109
Query: 129 LFDRIVAQERYMEVGAAAVIR---QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLK 185
           L D +  +E    +G+  ++    QIA+G+  L    +VHRDL   N L    +    +K
Sbjct: 110 LLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH---VK 164
Query: 186 IMDFGLSSVEGYTDPVVGLFGS---IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GY 241
           I DFGL+ + G  +      G    I +++ E++L    T +SD+WS GV ++ L++ G 
Sbjct: 165 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 224
Query: 242 PPF 244
            P+
Sbjct: 225 KPY 227

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 50/153 (32%), Positives = 71/153 (46%), Gaps = 18/153 (11%)
Query: 119 LILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLN 177
           LI+E    G L D +   +ER   +       QI +G+  L     +HR+L   N L  N
Sbjct: 91  LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRNLATRNILVEN 150
Query: 178 DREDSPLKIMDFGLSSV-----EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGV 232
           +     +KI DFGL+ V     E Y     G    I + +PE+L + + +  SD+WS GV
Sbjct: 151 ENR---VKIGDFGLTKVLPQDKEYYKVKEPGE-SPIFWYAPESLTESKFSVASDVWSFGV 206
Query: 233 ILYILL-----SGYPP--FIAQSNRQKQ-QMIM 257
           +LY L      S  PP  F+      KQ QMI+
Sbjct: 207 VLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 239

>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic Mutant L858r Egfr Kinase Domain Length = 329

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 108/243 (44%), Gaps = 47/243 (19%)
Query: 11  EYEVTDILGRGGFSVVRRGIKKTCGETNQ--VAIKTLRRIGSTTPYGFPXXXXXXXXXQI 68
           E++   +LG G F  V +G+    GE  +  VAIK LR   +T+P               
Sbjct: 18  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPK-------------- 61
Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
                      ++  + +E  VM   V+N    P+V  L  +      V LI +L   G 
Sbjct: 62  -----------ANKEILDEAYVMAS-VDN----PHVCRLLGICLTST-VQLITQLMPFGC 104
Query: 129 LFDRIVAQERYMEVGAAAVIR---QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLK 185
           L D +  +E    +G+  ++    QIA+G+  L    +VHRDL   N L    +    +K
Sbjct: 105 LLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH---VK 159
Query: 186 IMDFGLSSVEGYTDPVVGLFGS---IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GY 241
           I DFG + + G  +      G    I +++ E++L    T +SD+WS GV ++ L++ G 
Sbjct: 160 ITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 219
Query: 242 PPF 244
            P+
Sbjct: 220 KPY 222

>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41 Length = 382

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 65/249 (26%), Positives = 106/249 (42%), Gaps = 52/249 (20%)
Query: 7   KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPXXXXXXXXX 66
           K  D YE+  ++G+G F  V +   +   E   VAIK ++   +                
Sbjct: 51  KWMDRYEIDSLIGKGSFGQVVKAYDRV--EQEWVAIKIIKNKKA---------------- 92
Query: 67  QIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQ-----NGVHLIL 121
               F  + Q+ V             +++E ++ H   +  Y V+  +     N + L+ 
Sbjct: 93  ----FLNQAQIEV-------------RLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVF 135
Query: 122 ELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLA------ALHQANIVHRDLKPENCLF 175
           E+ S   L+D ++    +  V +  + R+ A+ +       A  + +I+H DLKPEN L 
Sbjct: 136 EMLSYN-LYD-LLRNTNFRGV-SLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILL 192
Query: 176 LNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY 235
            N +  + +KI+DFG S   G    +     S  Y SPE LL        DMWSLG IL 
Sbjct: 193 CNPKRXA-IKIVDFGSSCQLG--QRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILV 249
Query: 236 ILLSGYPPF 244
            + +G P F
Sbjct: 250 EMHTGEPLF 258

>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In Complex With Amppnp Length = 334

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 108/243 (44%), Gaps = 47/243 (19%)
Query: 11  EYEVTDILGRGGFSVVRRGIKKTCGETNQ--VAIKTLRRIGSTTPYGFPXXXXXXXXXQI 68
           E++   +LG G F  V +G+    GE  +  VAIK LR   +T+P               
Sbjct: 23  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPK-------------- 66
Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
                      ++  + +E  VM   V+N    P+V  L  +      V LI +L   G 
Sbjct: 67  -----------ANKEILDEAYVMAS-VDN----PHVCRLLGICLTST-VQLITQLMPFGC 109
Query: 129 LFDRIVAQERYMEVGAAAVIR---QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLK 185
           L D +  +E    +G+  ++    QIA+G+  L    +VHRDL   N L    +    +K
Sbjct: 110 LLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH---VK 164
Query: 186 IMDFGLSSVEGYTDPVVGLFGS---IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GY 241
           I DFG + + G  +      G    I +++ E++L    T +SD+WS GV ++ L++ G 
Sbjct: 165 ITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 224
Query: 242 PPF 244
            P+
Sbjct: 225 KPY 227

>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In Complex With Amp-Pnp Length = 327

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 108/243 (44%), Gaps = 47/243 (19%)
Query: 11  EYEVTDILGRGGFSVVRRGIKKTCGETNQ--VAIKTLRRIGSTTPYGFPXXXXXXXXXQI 68
           E++   +L  G F  V +G+    GE  +  VAIK LR   +T+P               
Sbjct: 16  EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPK-------------- 59
Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
                      ++  + +E  VM   V+N    P+V  L  +      V LI +L   G 
Sbjct: 60  -----------ANKEILDEAYVMAS-VDN----PHVCRLLGICLTST-VQLITQLMPFGC 102
Query: 129 LFDRIVAQERYMEVGAAAVIR---QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLK 185
           L D +  +E    +G+  ++    QIA+G+  L    +VHRDL   N L    +    +K
Sbjct: 103 LLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH---VK 157
Query: 186 IMDFGLSSVEGYTDPVVGLFGS---IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GY 241
           I DFGL+ + G  +      G    I +++ E++L    T +SD+WS GV ++ L++ G 
Sbjct: 158 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 217
Query: 242 PPF 244
            P+
Sbjct: 218 KPY 220

>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In Complex With Aee788 Length = 327

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 108/243 (44%), Gaps = 47/243 (19%)
Query: 11  EYEVTDILGRGGFSVVRRGIKKTCGETNQ--VAIKTLRRIGSTTPYGFPXXXXXXXXXQI 68
           E++   +LG G F  V +G+    GE  +  VAIK LR   +T+P               
Sbjct: 16  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPK-------------- 59
Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
                      ++  + +E  VM   V+N    P+V  L  +      V LI +L   G 
Sbjct: 60  -----------ANKEILDEAYVMAS-VDN----PHVCRLLGICLTST-VQLITQLMPFGC 102
Query: 129 LFDRIVAQERYMEVGAAAVIR---QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLK 185
           L D +  +E    +G+  ++    QIA+G+  L    +VHRDL   N L    +    +K
Sbjct: 103 LLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH---VK 157
Query: 186 IMDFGLSSVEGYTDPVVGLFGS---IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GY 241
           I DFG + + G  +      G    I +++ E++L    T +SD+WS GV ++ L++ G 
Sbjct: 158 ITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 217
Query: 242 PPF 244
            P+
Sbjct: 218 KPY 220

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 72/154 (46%), Gaps = 16/154 (10%)
Query: 117 VHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLF 175
           + LI+E    G L D +   +ER   +       QI +G+  L     +HRDL   N L 
Sbjct: 87  LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV 146
Query: 176 LNDREDSPLKIMDFGLSSV--EGYTDPVVGLFGS--IDYVSPEALLQDRITSKSDMWSLG 231
            N+     +KI DFGL+ V  +      V   G   I + +PE+L + + +  SD+WS G
Sbjct: 147 ENENR---VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFG 203
Query: 232 VILYILL-----SGYPP--FIAQSNRQKQ-QMIM 257
           V+LY L      S  PP  F+      KQ QMI+
Sbjct: 204 VVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 237

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 72/154 (46%), Gaps = 16/154 (10%)
Query: 117 VHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLF 175
           + LI+E    G L D +   +ER   +       QI +G+  L     +HRDL   N L 
Sbjct: 93  LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV 152
Query: 176 LNDREDSPLKIMDFGLSSV--EGYTDPVVGLFGS--IDYVSPEALLQDRITSKSDMWSLG 231
            N+     +KI DFGL+ V  +      V   G   I + +PE+L + + +  SD+WS G
Sbjct: 153 ENENR---VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFG 209
Query: 232 VILYILL-----SGYPP--FIAQSNRQKQ-QMIM 257
           V+LY L      S  PP  F+      KQ QMI+
Sbjct: 210 VVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 243

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 72/154 (46%), Gaps = 16/154 (10%)
Query: 117 VHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLF 175
           + LI+E    G L D +   +ER   +       QI +G+  L     +HRDL   N L 
Sbjct: 91  LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV 150
Query: 176 LNDREDSPLKIMDFGLSSV--EGYTDPVVGLFGS--IDYVSPEALLQDRITSKSDMWSLG 231
            N+     +KI DFGL+ V  +      V   G   I + +PE+L + + +  SD+WS G
Sbjct: 151 ENENR---VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFG 207
Query: 232 VILYILL-----SGYPP--FIAQSNRQKQ-QMIM 257
           V+LY L      S  PP  F+      KQ QMI+
Sbjct: 208 VVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 241

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 72/154 (46%), Gaps = 16/154 (10%)
Query: 117 VHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLF 175
           + LI+E    G L D +   +ER   +       QI +G+  L     +HRDL   N L 
Sbjct: 92  LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV 151
Query: 176 LNDREDSPLKIMDFGLSSV--EGYTDPVVGLFGS--IDYVSPEALLQDRITSKSDMWSLG 231
            N+     +KI DFGL+ V  +      V   G   I + +PE+L + + +  SD+WS G
Sbjct: 152 ENENR---VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFG 208
Query: 232 VILYILL-----SGYPP--FIAQSNRQKQ-QMIM 257
           V+LY L      S  PP  F+      KQ QMI+
Sbjct: 209 VVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 242

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 72/154 (46%), Gaps = 16/154 (10%)
Query: 117 VHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLF 175
           + LI+E    G L D +   +ER   +       QI +G+  L     +HRDL   N L 
Sbjct: 88  LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV 147
Query: 176 LNDREDSPLKIMDFGLSSV--EGYTDPVVGLFGS--IDYVSPEALLQDRITSKSDMWSLG 231
            N+     +KI DFGL+ V  +      V   G   I + +PE+L + + +  SD+WS G
Sbjct: 148 ENENR---VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFG 204
Query: 232 VILYILL-----SGYPP--FIAQSNRQKQ-QMIM 257
           V+LY L      S  PP  F+      KQ QMI+
Sbjct: 205 VVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 238
  Database: pdbaa

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	521
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	1e-176
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	1e-174
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	1e-173
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	5e-04
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	1e-173
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	8e-04
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	1e-133
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	1e-128
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	1e-124
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	1e-124
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	1e-122
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	1e-119
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	1e-118
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	1e-117
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	1e-116
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	1e-115
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	1e-114
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	1e-114
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	1e-114
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	1e-113
3bhy_A	283	Death-associated protein kinase 3; death associate	1e-113
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	1e-111
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	1e-111
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	1e-111
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	1e-110
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	1e-110
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	1e-109
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	1e-109
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	1e-108
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	1e-107
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	1e-107
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	1e-106
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	1e-105
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	1e-100
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	1e-98
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	1e-84
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	1e-81
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	9e-80
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	1e-77
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	6e-77
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	3e-76
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	2e-75
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	2e-74
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	5e-72
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	1e-71
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	3e-71
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	6e-69
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	1e-68
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	2e-68
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	7e-68
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	2e-67
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	3e-67
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	2e-66
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	5e-66
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	7e-65
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	6e-64
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	7e-64
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	3e-63
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	2e-62
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	3e-61
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	8e-61
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	9e-61
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	1e-60
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	2e-60
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	2e-60
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	3e-60
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	9e-60
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	5e-59
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	3e-57
2a19_B	284	Interferon-induced, double-stranded RNA-activated	5e-57
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	3e-55
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	8e-54
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	3e-52
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	4e-52
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	5e-52
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	5e-48
2ggz_A	211	Guanylyl cyclase-activating protein 3; EF hand, gu	8e-48
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	2e-47
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	4e-47
2r2i_A	198	Guanylyl cyclase-activating protein 1; EF hand, GC	8e-45
2jul_A	256	Calsenilin; EF-hand, calcium, LXXLL, DNA binding p	1e-44
2ehb_A	207	Calcineurin B-like protein 4; protein complex, Ca(	2e-42
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	4e-42
1s1e_A	224	KV channel interacting protein 1; kchip, calcium-b	5e-42
3dd4_A	229	KV channel-interacting protein 4; EF-hands protein	1e-41
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	2e-41
1bjf_A	193	Neurocalcin delta; calcium-binding, myristoylation	2e-41
1jba_A	204	GCAP-2, protein (guanylate cyclase activating prot	3e-41
2l2e_A	190	Calcium-binding protein NCS-1; NCS1P, myristoylate	4e-41
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	6e-41
2zfd_A	226	Calcineurin B-like protein 2; calcium binding prot	2e-40
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	6e-40
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	8e-40
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	1e-39
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	2e-39
1s6c_A	183	KV4 potassium channel-interacting protein kchip1B;	3e-39
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	3e-39
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	5e-39
1g8i_A	190	Frequenin, neuronal calcium sensor 1; calcium bind	6e-39
2d8n_A	207	Recoverin; structural genomics, NPPSFA, national p	1e-38
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	2e-38
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	7e-38
1fpw_A	190	Yeast frequenin, calcium-binding protein NCS-1; EF	2e-37
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	5e-37
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	6e-37
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	1e-36
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	2e-36
1dgu_A	183	Calcium-saturated CIB; helical, EF-hands, blood cl	2e-36
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	9e-36
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	9e-36
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	9e-36
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	9e-36
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	2e-35
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	3e-35
3niz_A	311	Rhodanese family protein; structural genomics, str	3e-35
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	4e-35
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	5e-35
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	6e-35
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	6e-35
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	9e-35
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	1e-34
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	1e-34
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	1e-34
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	1e-34
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	1e-34
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	1e-34
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	1e-34
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	2e-34
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	2e-34
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	3e-34
3o0g_A	292	Cell division protein kinase 5; kinase activator c	4e-34
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	5e-34
3ork_A	311	Serine/threonine protein kinase; structural genomi	6e-34
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	7e-34
3aln_A	327	Dual specificity mitogen-activated protein kinase;	9e-34
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	1e-33
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	2e-33
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	2e-33
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	2e-33
2dyl_A	318	Dual specificity mitogen-activated protein kinase	3e-33
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	3e-33
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	4e-33
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	5e-33
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	5e-33
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	6e-33
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	6e-33
3fme_A	290	Dual specificity mitogen-activated protein kinase;	7e-33
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	9e-33
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	1e-32
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	2e-32
3an0_A	340	Dual specificity mitogen-activated protein kinase;	3e-32
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	5e-32
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	6e-32
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	2e-31
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	3e-31
2l4h_A	214	Calcium and integrin-binding protein 1; metal bind	3e-31
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	4e-31
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	1e-30
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	1e-30
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	1e-30
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	2e-30
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	3e-30
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	3e-30
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	3e-30
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	5e-30
2ct9_A	208	Calcium-binding protein P22; EF-hand, metal bindin	6e-30
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	2e-29
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	2e-29
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	2e-29
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	2e-29
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	2e-29
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	3e-29
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	3e-29
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	3e-29
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	5e-29
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	7e-29
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	1e-28
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	2e-28
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	2e-28
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	2e-28
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	2e-28
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	3e-28
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	3e-28
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	4e-28
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	5e-28
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	8e-28
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	8e-28
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	1e-27
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	1e-27
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	1e-27
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	2e-27
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	2e-27
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	2e-27
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	3e-27
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	4e-27
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	6e-27
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	6e-27
3uqc_A	286	Probable conserved transmembrane protein; structur	7e-27
3pls_A	298	Macrophage-stimulating protein receptor; protein k	8e-27
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	8e-27
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	8e-27
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	9e-27
2bec_A	202	Calcineurin B homologous protein 2; calcineurin-ho	2e-26
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	2e-26
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	2e-26
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	3e-26
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	4e-26
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	7e-26
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	1e-25
3pm8_A	197	PFCDPK2, calcium-dependent protein kinase 2; malar	1e-25
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	2e-25
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	3e-25
3k21_A	191	PFCDPK3, calcium-dependent protein kinase 3; calci	3e-25
3k21_A	191	PFCDPK3, calcium-dependent protein kinase 3; calci	2e-09
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	4e-25
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	4e-25
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	6e-25
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	8e-25
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	2e-24
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	2e-24
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	2e-24
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	5e-24
1ij5_A	323	Plasmodial specific LAV1-2 protein; fourty kDa cal	7e-24
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	8e-24
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	8e-24
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	1e-23
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	1e-23
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	1e-23
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	2e-23
3ll8_B	155	Calcineurin subunit B type 1; protein-peptide dock	2e-23
3rp9_A	458	Mitogen-activated protein kinase; structural genom	4e-23
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	4e-23
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	4e-23
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	5e-23
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	1e-22
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	2e-22
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	4e-22
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	1e-21
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	1e-21
4aoj_A	329	High affinity nerve growth factor receptor; transf	2e-21
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	3e-21
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	3e-21
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	5e-21
3q4u_A	301	Activin receptor type-1; structural genomics conso	7e-21
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	9e-21
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	1e-20
2hps_A	186	Coelenterazine-binding protein with bound coelent;	2e-20
2hps_A	186	Coelenterazine-binding protein with bound coelent;	2e-10
3soc_A	322	Activin receptor type-2A; structural genomics cons	8e-20
3mse_B	180	Calcium-dependent protein kinase, putative; CDPKS,	1e-19
3mse_B	180	Calcium-dependent protein kinase, putative; CDPKS,	1e-10
3mse_B	180	Calcium-dependent protein kinase, putative; CDPKS,	7e-04
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	2e-19
3e3r_A	204	Calcyphosin, calcyphosine; human calcyphosine, EF-	4e-19
3khe_A	191	Calmodulin-like domain protein kinase isoform 3; c	6e-19
3khe_A	191	Calmodulin-like domain protein kinase isoform 3; c	8e-05
3cs1_A	219	Flagellar calcium-binding protein; myristoylated,	6e-19
3cs1_A	219	Flagellar calcium-binding protein; myristoylated,	6e-05
2hpk_A	208	Photoprotein berovin; structural genomics, PSI, pr	6e-18
2hpk_A	208	Photoprotein berovin; structural genomics, PSI, pr	2e-10
2hpk_A	208	Photoprotein berovin; structural genomics, PSI, pr	2e-04
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	7e-18
2ccm_A	191	Calexcitin; EF hand, calcium, signaling protein; 1	1e-17
2ccm_A	191	Calexcitin; EF hand, calcium, signaling protein; 1	9e-09
1q80_A	174	SCP, sarcoplasmic calcium-binding protein; all-alp	2e-17
1q80_A	174	SCP, sarcoplasmic calcium-binding protein; all-alp	5e-13
1q80_A	174	SCP, sarcoplasmic calcium-binding protein; all-alp	2e-09
1q80_A	174	SCP, sarcoplasmic calcium-binding protein; all-alp	3e-06
1q80_A	174	SCP, sarcoplasmic calcium-binding protein; all-alp	3e-05
2aao_A	166	CDPK, calcium-dependent protein kinase, isoform AK	5e-17
1nya_A	176	Calerythrin; EF-hand, metal binding protein; NMR {	1e-16
1nya_A	176	Calerythrin; EF-hand, metal binding protein; NMR {	1e-12
1nya_A	176	Calerythrin; EF-hand, metal binding protein; NMR {	4e-10
1nya_A	176	Calerythrin; EF-hand, metal binding protein; NMR {	3e-06
1nya_A	176	Calerythrin; EF-hand, metal binding protein; NMR {	2e-04
3sjs_A	220	URE3-BP sequence specific DNA binding protein; EF-	6e-16
3sjs_A	220	URE3-BP sequence specific DNA binding protein; EF-	3e-11
3sjs_A	220	URE3-BP sequence specific DNA binding protein; EF-	1e-07
1s6i_A	188	CDPK, calcium-dependent protein kinase SK5; EF-han	7e-16
1y1x_A	191	Leishmania major homolog of programmed cell death	1e-15
3akb_A	166	Putative calcium binding protein; EF-hand, metal b	3e-15
3akb_A	166	Putative calcium binding protein; EF-hand, metal b	1e-11
1jfj_A	134	Ehcabp, calcium-binding protein; EF-hand, helix-lo	3e-15
1jfj_A	134	Ehcabp, calcium-binding protein; EF-hand, helix-lo	6e-12
1jfj_A	134	Ehcabp, calcium-binding protein; EF-hand, helix-lo	1e-08
2sas_A	185	Sarcoplasmic calcium-binding protein; 2.40A {Branc	2e-14
2sas_A	185	Sarcoplasmic calcium-binding protein; 2.40A {Branc	8e-04
3qrx_A	169	Centrin; calcium-binding, EF-hand, cell division,	2e-14
1eg3_A	261	Dystrophin; EF-hand like domain, WW domain, struct	3e-14
3fwb_A	161	Cell division control protein 31; gene gating, com	6e-14
3fwb_A	161	Cell division control protein 31; gene gating, com	1e-08
3fwb_A	161	Cell division control protein 31; gene gating, com	3e-08
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	7e-14
2znd_A	172	Programmed cell death protein 6; penta-EF-hand pro	8e-14
1uhk_A	191	Aequorin 2, aequorin; EF-hand motif, complex, lumi	9e-14
1uhk_A	191	Aequorin 2, aequorin; EF-hand motif, complex, lumi	4e-10
1uhk_A	191	Aequorin 2, aequorin; EF-hand motif, complex, lumi	2e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-13
3ox6_A	153	Calcium-binding protein 1; EF-hand, calcium-sensor	1e-13
3ox6_A	153	Calcium-binding protein 1; EF-hand, calcium-sensor	3e-09
2f2o_A	179	Calmodulin fused with calmodulin-binding domain of	1e-13
2f2o_A	179	Calmodulin fused with calmodulin-binding domain of	2e-04
1qv0_A	195	Obelin, OBL; photoprotein, bioluminescence, atomic	1e-13
1qv0_A	195	Obelin, OBL; photoprotein, bioluminescence, atomic	3e-08
1qv0_A	195	Obelin, OBL; photoprotein, bioluminescence, atomic	1e-04
2be4_A	272	Hypothetical protein LOC449832; DR.36843, BC083168	2e-13
2be4_A	272	Hypothetical protein LOC449832; DR.36843, BC083168	3e-13
2be4_A	272	Hypothetical protein LOC449832; DR.36843, BC083168	3e-08
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	2e-13
1cb1_A	78	Calbindin D9K; calcium-binding protein; NMR {Sus s	2e-13
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	2e-13
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	3e-13
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	3e-13
2obh_A	143	Centrin-2; DNA repair complex EF hand superfamily	4e-13
2pmy_A	91	RAS and EF-hand domain-containing protein; rasef,	5e-13
2pmy_A	91	RAS and EF-hand domain-containing protein; rasef,	7e-06
1top_A	162	Troponin C; contractIle system protein; 1.78A {Gal	6e-13
1top_A	162	Troponin C; contractIle system protein; 1.78A {Gal	5e-09
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	6e-13
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	8e-13
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	9e-13
5pal_A	109	Parvalbumin; calcium-binding protein; 1.54A {Triak	1e-12
2f33_A	263	Calbindin; EF-hand, Ca2+-binding, metal binding pr	2e-12
2f33_A	263	Calbindin; EF-hand, Ca2+-binding, metal binding pr	5e-12
2f33_A	263	Calbindin; EF-hand, Ca2+-binding, metal binding pr	2e-09
2f33_A	263	Calbindin; EF-hand, Ca2+-binding, metal binding pr	2e-09
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	2e-12
2jnf_A	158	Troponin C; stretch activated muscle contraction,	2e-12
2jnf_A	158	Troponin C; stretch activated muscle contraction,	5e-09
2jnf_A	158	Troponin C; stretch activated muscle contraction,	2e-07
3fs7_A	109	Parvalbumin, thymic; calcium-binding protein, EF-h	2e-12
1exr_A	148	Calmodulin; high resolution, disorder, metal trans	3e-12
1exr_A	148	Calmodulin; high resolution, disorder, metal trans	1e-08
1exr_A	148	Calmodulin; high resolution, disorder, metal trans	2e-07
3sg6_A	450	Gcamp2, myosin light chain kinase, green fluoresce	7e-12
3sg6_A	450	Gcamp2, myosin light chain kinase, green fluoresce	4e-08
3sg6_A	450	Gcamp2, myosin light chain kinase, green fluoresce	4e-08
1w7j_B	151	Myosin light chain 1; motor protein, unconventiona	1e-11
1w7j_B	151	Myosin light chain 1; motor protein, unconventiona	9e-08
1w7j_B	151	Myosin light chain 1; motor protein, unconventiona	1e-05
1psr_A	100	Psoriasin, S100A7; EF-hand protein, MAD phasing, p	1e-11
1yx7_A	83	Calsensin, LAN3-6 antigen; calcium-binding protein	1e-11
4ds7_A	147	Calmodulin, CAM; protein binding, metal binding, s	1e-11
1dtl_A	161	Cardiac troponin C; helix-turn-helix, structural p	1e-11
1dtl_A	161	Cardiac troponin C; helix-turn-helix, structural p	5e-07
2pvb_A	108	Protein (parvalbumin); calcium binding protein, me	2e-11
2mys_B	166	Myosin; muscle protein, motor protein; HET: MLY; 2	2e-11
1bu3_A	109	Calcium-binding protein; 1.65A {Merluccius bilinea	2e-11
3li6_A	66	Calcium-binding protein; calcium signaling protein	2e-11
3li6_A	66	Calcium-binding protein; calcium signaling protein	9e-11
3li6_A	66	Calcium-binding protein; calcium signaling protein	1e-06
1pva_A	110	Parvalbumin; calcium binding; 1.65A {Esox lucius}	3e-11
2opo_A	86	Polcalcin CHE A 3; calcium-binding protein, dimer,	3e-11
3a4u_B	143	Multiple coagulation factor deficiency protein 2;	3e-11
3j04_B	143	Myosin regulatory light chain 2, smooth muscle MA	3e-11
1qx2_A	76	Vitamin D-dependent calcium-binding protein, INTE;	6e-11
1alv_A	173	Calpain, S-camld; calcium binding, calmodulin like	8e-11
1tiz_A	67	Calmodulin-related protein, putative; helix-turn-h	8e-11
1k9u_A	78	Polcalcin PHL P 7; pollen allergen, calcium-bindin	1e-10
1s6j_A	87	CDPK, calcium-dependent protein kinase SK5; EF-han	1e-10
1s6j_A	87	CDPK, calcium-dependent protein kinase SK5; EF-han	5e-05
2kyc_A	108	Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand p	1e-10
1rro_A	108	RAT oncomodulin; calcium-binding protein; 1.30A {R	2e-10
1rro_A	108	RAT oncomodulin; calcium-binding protein; 1.30A {R	3e-04
1rwy_A	109	Parvalbumin alpha; EF-hand, calcium-binding, calci	2e-10
1c7v_A	81	CAVP, calcium vector protein; EF-hand family, calc	4e-10
2b1u_A	71	Calmodulin-like protein 5; CLSP, calmodulin-like S	4e-10
2h2k_A	106	Protein S100-A13; calcium binding protein, metal b	5e-10
1snl_A	103	Nucleobindin 1, calnuc; EF-hand, calcium-binding,	5e-10
1avs_A	90	Troponin C; muscle contraction, calcium-activated,	6e-10
2ktg_A	85	Calmodulin, putative; ehcam, Ca-binding protein, p	7e-10
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	8e-10
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	8e-10
2bl0_C	142	Myosin regulatory light chain; muscle protein, sli	9e-10
2bl0_C	142	Myosin regulatory light chain; muscle protein, sli	9e-09
2mys_C	149	Myosin; muscle protein, motor protein; HET: MLY; 2	1e-09
2mys_C	149	Myosin; muscle protein, motor protein; HET: MLY; 2	3e-07
2mys_C	149	Myosin; muscle protein, motor protein; HET: MLY; 2	3e-06
3h4s_E	135	KCBP interacting Ca2+-binding protein; kinesin, mo	2e-09
2bl0_B	145	Myosin regulatory light chain; muscle protein, sli	2e-09
2bl0_B	145	Myosin regulatory light chain; muscle protein, sli	2e-06
1wdc_B	156	Scallop myosin; calcium binding protein, muscle pr	3e-09
1wdc_B	156	Scallop myosin; calcium binding protein, muscle pr	3e-07
3dtp_E	196	RLC, myosin regulatory light chain; muscle protein	3e-09
3dtp_E	196	RLC, myosin regulatory light chain; muscle protein	8e-07
2joj_A	77	Centrin protein; N-terminal domain, centrin soluti	3e-09
2ovk_B	153	RLC, myosin regulatory light chain LC-2, mantle mu	3e-09
2ovk_B	153	RLC, myosin regulatory light chain LC-2, mantle mu	8e-07
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	3e-09
1ggw_A	140	Protein (CDC4P); light chain, cytokinesis, cell cy	3e-09
1ggw_A	140	Protein (CDC4P); light chain, cytokinesis, cell cy	4e-08
2qac_A	146	Myosin A tail domain interacting protein MTIP; mal	3e-09
1a4p_A	96	S100A10; S100 family, EF-hand protein, ligand of a	3e-09
1c07_A	95	Protein (epidermal growth factor receptor pathway	4e-09
2d58_A	107	Allograft inflammatory factor 1; EF-hand, metal bi	7e-09
2kgr_A	111	Intersectin-1; structure, alternative splicing, ca	7e-09
1m45_A	148	MLC1P, myosin light chain; protein-peptide complex	1e-08
1m45_A	148	MLC1P, myosin light chain; protein-peptide complex	2e-08
2kz2_A	94	Calmodulin, CAM; TR2C, metal binding protein; NMR	1e-08
4eto_A	93	Protein S100-A4; calcium-binding protein, EF-hand,	2e-08
2ovk_C	159	Myosin catalytic light chain LC-1, mantle muscle,	2e-08
2ovk_C	159	Myosin catalytic light chain LC-1, mantle muscle,	2e-07
3zwh_A	104	Protein S100-A4; Ca-binding protein-motor protein	2e-08
1fi6_A	92	EH domain protein REPS1; EPS15 homology domain, EF	2e-08
2kn2_A	92	Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco	3e-08
1wdc_C	156	Scallop myosin; calcium binding protein, muscle pr	3e-08
1wdc_C	156	Scallop myosin; calcium binding protein, muscle pr	1e-06
1iq3_A	110	Ralbp1-interacting protein (partner of ralbp1); EF	3e-08
1wy9_A	147	Allograft inflammatory factor 1; EF-hand, calucium	5e-08
1xk4_C	113	Calgranulin B; S100 family, heterotetramer, metal	5e-08
2jjz_A	150	Ionized calcium-binding adapter molecule 2; EF-han	6e-08
2lnk_A	113	Protein S100-A4; EF-hand, calcium binding, all alp	7e-08
3a8r_A	179	Putative uncharacterized protein; EF-hand, membran	8e-08
1k94_A	165	Grancalcin; penta-EF-hand protein, calcium binding	1e-07
1k94_A	165	Grancalcin; penta-EF-hand protein, calcium binding	2e-04
1juo_A	198	Sorcin; calcium-binding proteins, penta-EF-hand, P	1e-07
1k2h_A	93	S100A1, S-100 protein, alpha chain; non-covalent h	2e-07
1gjy_A	167	Sorcin, CP-22, V19; calcium binding, calcium-bindi	2e-07
1gjy_A	167	Sorcin, CP-22, V19; calcium binding, calcium-bindi	1e-05
1gjy_A	167	Sorcin, CP-22, V19; calcium binding, calcium-bindi	2e-04
1gjy_A	167	Sorcin, CP-22, V19; calcium binding, calcium-bindi	2e-04
2wcb_A	95	Protein S100-A12; calcium signalling, HOST-parasit	2e-07
2i7a_A	174	Calpain 13; calcium-dependent cytoplasmic cysteine	4e-07
2kax_A	92	Protein S100-A5; EF-hand, calcium binding protien,	5e-07
3nxa_A	100	Protein S100-A16; S100 family, calcium binding pro	8e-07
3rm1_A	92	Protein S100-B; alpha-helical, EF hand, metal bind	9e-07
2y5i_A	99	S100Z, S100 calcium binding protein Z; metal-bindi	2e-06
1qls_A	99	S100C protein, calgizzarin; metal-binding protein/	2e-06
1j55_A	95	S-100P protein; metal binding protein; 2.00A {Homo	4e-06
3nso_A	101	Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, meta	4e-06
1k8u_A	90	S100A6, calcyclin, CACY; calcium regulatory protei	7e-06
1djx_A	624	PLC-D1, phosphoinositide-specific phospholipase C,	8e-06
1djx_A	624	PLC-D1, phosphoinositide-specific phospholipase C,	1e-05
3n22_A	98	Protein S100-A2; EF-hand, calcium-binding, zinc-bi	1e-05
1qjt_A	99	EH1, epidermal growth factor receptor substrate su	1e-05
1wlz_A	105	DJBP, CAP-binding protein complex interacting prot	3e-05
3fia_A	121	Intersectin-1; EH 1 domain, NESG, structural genom	3e-05
1xk4_A	93	Calgranulin A; S100 family, heterotetramer, metal	5e-05
1eh2_A	106	EPS15; calcium binding, signaling domain, NPF bind	9e-05
3bow_A	714	Calpain-2 catalytic subunit; cysteine protease, in	1e-04
1qxp_A	900	MU-like calpain; M-calpain, MU-calpain, catalytic	2e-04
1qxp_A	900	MU-like calpain; M-calpain, MU-calpain, catalytic	5e-04

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score =  504 bits (1299), Expect = e-176
 Identities = 147/521 (28%), Positives = 242/521 (46%), Gaps = 61/521 (11%)

Query: 2   GQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRG 61
            ++  K+ + Y     LG G +  V    +K      + AIK +++              
Sbjct: 28  RKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHS--EKAIKVIKK-------------- 71

Query: 62  SSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLIL 121
            S   +  +    K +      + NEI +++ +      HPN+I L+DV+ED+   +L+ 
Sbjct: 72  -SQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL-----DHPNIIKLFDVFEDKKYFYLVT 125

Query: 122 ELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRED 181
           E   GGELF++I+ + ++ E  AA +++QI  G+  LH+ NIVHRD+KPEN L  N    
Sbjct: 126 EFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSL 185

Query: 182 SPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGY 241
             +KI+DFGLSS       +    G+  Y++PE L + +   K D+WS GVI+YILL GY
Sbjct: 186 LNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGY 244

Query: 242 PPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPW 301
           PPF  Q+++   + +  G++ F    WKNIS  AK+LI  +LT D N+R +A+E LN  W
Sbjct: 245 PPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRW 304

Query: 302 VIGDSAKEEEMDAEI----VSRLQSFNARRKLRAAAIASVLSSTIFLRRTKKLKNLLGSH 357
           +   +    + D +     +S ++ F   +KL  AAI                   +GS 
Sbjct: 305 IKKYANNINKSDQKTLCGALSNMRKFEGSQKLAQAAI-----------------LFIGSK 347

Query: 358 DLNEEEIQNLRIHFRTICANGDNA-TLSEFEEVLKAM--------NMSSLVPLAPRIFDL 408
               EE + L   F+ +  NGD      E  E    +         + ++      I   
Sbjct: 348 LTTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKE 407

Query: 409 FDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDD 468
            D +++G ++  E +      +    ++ LR  F ++D D+SG ITKEE+A++       
Sbjct: 408 VDFDKNGYIEYSEFISVCMDKQILFSEERLRRAFNLFDTDKSGKITKEELANLFGLTSIS 467

Query: 469 CLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDSS 509
                       +++    D N D  + FDEF + M +   
Sbjct: 468 --------EKTWNDVLGEADQNKDNMIDFDEFVSMMHKICD 500

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score =  500 bits (1289), Expect = e-174
 Identities = 154/523 (29%), Positives = 248/523 (47%), Gaps = 73/523 (13%)

Query: 1   MGQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSR 60
           +  +   L++ Y+    LG G +  V     K      + AIK +               
Sbjct: 28  ITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHV--ERAIKII--------------- 70

Query: 61  GSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLI 120
                            + S++ L  E+ V++ +      HPN++ LYD +ED+   +L+
Sbjct: 71  -----------RKTSVSTSSNSKLLEEVAVLKLL-----DHPNIMKLYDFFEDKRNYYLV 114

Query: 121 LELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRE 180
           +E   GGELFD I+ + ++ EV AA +I+Q+  G+  LH+ NIVHRDLKPEN L  +  +
Sbjct: 115 MECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEK 174

Query: 181 DSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSG 240
           D+ +KI+DFGLS+V      +    G+  Y++PE +L+ +   K D+WS+GVIL+ILL+G
Sbjct: 175 DALIKIVDFGLSAVFENQKKMKERLGTAYYIAPE-VLRKKYDEKCDVWSIGVILFILLAG 233

Query: 241 YPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHP 300
           YPPF  Q++++  + +  G+++F    WKN+S  AK LI  +L  D  RR SAQ+ L HP
Sbjct: 234 YPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHP 293

Query: 301 WVIGDSAKEEE-----MDAEIVSRLQSFNARRKLRAAAIASVLSSTIFLRRTKKLKNLLG 355
           W+    +K+E        A  +  ++ F   +KL  AA+                   + 
Sbjct: 294 WIKEMCSKKESGIELPSLANAIENMRKFQNSQKLAQAAL-----------------LYMA 336

Query: 356 SHDLNEEEIQNLRIHFRTICANGDNA-TLSEFEEVLK--------AMNMSSLVPLAPRIF 406
           S   ++EE + L   FR I  NGD      E  +             ++  +      I 
Sbjct: 337 SKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAIL 396

Query: 407 DLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALP 466
              D +R+G +D  E +      +     D L   FQ +D D +G I+ +E+AS+     
Sbjct: 397 GAADFDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASV----- 451

Query: 467 DDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDSS 509
                +D  E     E+   +D+NNDG V F+EF   +Q+  S
Sbjct: 452 ---FGLDHLESKTWKEMISGIDSNNDGDVDFEEFCKMIQKLCS 491

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score =  497 bits (1281), Expect = e-173
 Identities = 142/522 (27%), Positives = 248/522 (47%), Gaps = 74/522 (14%)

Query: 1   MGQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSR 60
           +   T   +D Y+   +LG+G F  V     K  G+  + A+K + +             
Sbjct: 17  VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQ--ECAVKVISK------------- 61

Query: 61  GSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLI 120
                        + +       L  E+ +++++      HPN++ LY+ +ED+   +L+
Sbjct: 62  ------------RQVKQKTDKESLLREVQLLKQL-----DHPNIMKLYEFFEDKGYFYLV 104

Query: 121 LELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRE 180
            E+ +GGELFD I++++R+ EV AA +IRQ+  G+  +H+  IVHRDLKPEN L  +  +
Sbjct: 105 GEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSK 164

Query: 181 DSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSG 240
           D+ ++I+DFGLS+    +  +    G+  Y++PE +L      K D+WS GVILYILLSG
Sbjct: 165 DANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223

Query: 241 YPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHP 300
            PPF   +     + +  G+++F    WK +S SAK LI  +LT  P+ R SA++ L+H 
Sbjct: 224 CPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHE 283

Query: 301 WVIGDSAKEEEMDA----EIVSRLQSFNARRKLRAAAIASVLSSTIFLRRTKKLKNLLGS 356
           W+   + ++  +D       +  ++ F   +KL  AA+                   +GS
Sbjct: 284 WIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAAL-----------------LYMGS 326

Query: 357 HDLNEEEIQNLRIHFRTICANGDNA-TLSEFEEVLK-----------AMNMSSLVPLAPR 404
              +++E + L   F  +  NGD     +E  E  K            ++ S++     +
Sbjct: 327 KLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQ 386

Query: 405 IFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRA 464
           + D  D +++G ++  E +      +     + L   F+M+D D SG I+  E+A++   
Sbjct: 387 VLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGV 446

Query: 465 LPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR 506
              D              +   +D NNDG+V FDEF+  + +
Sbjct: 447 SDVD--------SETWKSVLSEVDKNNDGEVDFDEFQQMLLK 480

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 41.6 bits (98), Expect = 5e-04
 Identities = 12/46 (26%), Positives = 18/46 (39%)

Query: 476 EPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDSSLQDVVLSSLRQQ 521
           E  +L  IF  MD N DG++   E     +    ++    S L   
Sbjct: 333 ETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDAS 378

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score =  495 bits (1276), Expect = e-173
 Identities = 133/518 (25%), Positives = 239/518 (46%), Gaps = 59/518 (11%)

Query: 5   TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSS 64
                + Y +  +LG+G F  V +   +   +  + A+K +                   
Sbjct: 17  QGTFAERYNIVCMLGKGSFGEVLKCKDRITQQ--EYAVKVI------------------- 55

Query: 65  SSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELC 124
                        +   + +  E+ +++K+      HPN++ L+++ ED +  +++ EL 
Sbjct: 56  -------NKASAKNKDTSTILREVELLKKL-----DHPNIMKLFEILEDSSSFYIVGELY 103

Query: 125 SGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPL 184
           +GGELFD I+ ++R+ E  AA +I+Q+  G+  +H+ NIVHRDLKPEN L  +  +D  +
Sbjct: 104 TGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDI 163

Query: 185 KIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF 244
           KI+DFGLS+       +    G+  Y++PE +L+     K D+WS GVILYILLSG PPF
Sbjct: 164 KIIDFGLSTCFQQNTKMKDRIGTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSGTPPF 222

Query: 245 IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIG 304
             ++     + +  G+++F    W+ IS  AK LI  +LT  P+ R +A + L HPW+  
Sbjct: 223 YGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQK 282

Query: 305 DSAKEEEM-----DAEIVSRLQSFNARRKLRAAAIASVLSSTIFLRRTKKLKNLLGSHD- 358
            S++   +         ++ ++ F A +KL  AA+  + S    L  TK+L  +    D 
Sbjct: 283 YSSETPTISDLPSLESAMTNIRQFQAEKKLAQAALLYMASKLTTLDETKQLTEIFRKLDT 342

Query: 359 -----LNEEEIQNLRIHFRTICANGDNATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNR 413
                L+ +E+      F  +     N+ +      ++             +  L D + 
Sbjct: 343 NNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQ--------IDSLMPLLDMDG 394

Query: 414 DGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVD 473
            G+++  E +            + +   F+M+D D SG I+ +E+  +            
Sbjct: 395 SGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGSGKISTKELFKLFSQADSSI---- 450

Query: 474 ITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDSSLQ 511
             +  +L+ I + +D N DG+V F+EF   +Q     +
Sbjct: 451 --QMEELESIIEQVDNNKDGEVDFNEFVEMLQNFVRNE 486

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 40.8 bits (96), Expect = 8e-04
 Identities = 17/46 (36%), Positives = 22/46 (47%)

Query: 476 EPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDSSLQDVVLSSLRQQ 521
           E  +L EIF  +D NNDG +  DE          L+ V  +SL Q 
Sbjct: 329 ETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQN 374

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score =  393 bits (1013), Expect = e-133
 Identities = 139/499 (27%), Positives = 214/499 (42%), Gaps = 70/499 (14%)

Query: 5   TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSS 64
             + T+EY++ + LG+G FSVVRR +K   G+  + A                       
Sbjct: 6   CTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQ--EYAAMI-------------------- 43

Query: 65  SSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELC 124
                   T+K  +     L  E  + R +      HPN++ L+D   ++   +LI +L 
Sbjct: 44  ------INTKKLSARDHQKLEREARICRLL-----KHPNIVRLHDSISEEGHHYLIFDLV 92

Query: 125 SGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPL 184
           +GGELF+ IVA+E Y E  A+  I+QI E +   HQ  +VHR+LKPEN L  +  + + +
Sbjct: 93  TGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAV 152

Query: 185 KIMDFGLSS-VEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPP 243
           K+ DFGL+  VEG      G  G+  Y+SPE L +D      D+W+ GVILYILL GYPP
Sbjct: 153 KLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPP 212

Query: 244 FIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVI 303
           F  +   +  Q I AG + F    W  ++  AK LI+ +LT++P++R +A E L HPW+ 
Sbjct: 213 FWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWIS 272

Query: 304 GDSAKEEEM-DAEIVSRLQSFNARRKLRAAAIASVLSSTIFLRRTKKLKNLLGSHDLNEE 362
             S     M   E V  L+ FNARRKL+ A +  +L+                + + +  
Sbjct: 273 HRSTVASCMHRQETVDCLKKFNARRKLKGAILTVMLA----------------TRNFSVR 316

Query: 363 EIQNLRIHFRTICANGDNATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMRE- 421
           + + +++  + I A   N     + ++     M++  P A         N    +D    
Sbjct: 317 KQEIIKVTEQLIEAIS-NGDFESYTKMCDP-GMTAFEPEA-------LGNLVEGLDFHRF 367

Query: 422 ILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLD 481
                 S         +         D S CI    +   L              P    
Sbjct: 368 YFENLWSRNSKPVHTTILNPHIHLMGDESACIAYIRITQYLD---------AGGIPRTAQ 418

Query: 482 EIFDLMDANNDGKVTFDEF 500
                +    DGK     F
Sbjct: 419 SEETRVWHRRDGKWQIVHF 437

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score =  375 bits (966), Expect = e-128
 Identities = 126/342 (36%), Positives = 177/342 (51%), Gaps = 39/342 (11%)

Query: 2   GQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRG 61
           G     L+D +EV   LGRG  S+V R  +K   +    A+K L+               
Sbjct: 45  GSNRDALSDFFEVESELGRGATSIVYRCKQKGTQK--PYALKVLK--------------- 87

Query: 62  SSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLIL 121
                        K V      +  EI V+ ++      HPN+I L +++E    + L+L
Sbjct: 88  -------------KTVDKKI--VRTEIGVLLRL-----SHPNIIKLKEIFETPTEISLVL 127

Query: 122 ELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRED 181
           EL +GGELFDRIV +  Y E  AA  ++QI E +A LH+  IVHRDLKPEN L+     D
Sbjct: 128 ELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPD 187

Query: 182 SPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGY 241
           +PLKI DFGLS +  +   +  + G+  Y +PE L       + DMWS+G+I YILL G+
Sbjct: 188 APLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGF 247

Query: 242 PPFIAQSNRQK-QQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHP 300
            PF  +   Q   + I+  E+ F    W  +S +AK L+  L+ +DP +R +  + L HP
Sbjct: 248 EPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHP 307

Query: 301 WVIGDSAKEEEMDAEIVSRLQSFNARRKLRAAAIASVLSSTI 342
           WV G +A    MD     +LQ FNARRKL+AA  A V SS +
Sbjct: 308 WVTGKAANFVHMDT-AQKKLQEFNARRKLKAAVKAVVASSRL 348

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score =  368 bits (946), Expect = e-124
 Identities = 122/395 (30%), Positives = 194/395 (49%), Gaps = 55/395 (13%)

Query: 1   MGQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSR 60
           M   + K +D Y+V + LG+G FSVVRR + KT G   + A K +               
Sbjct: 20  MMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGL--EFAAKII--------------- 62

Query: 61  GSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLI 120
                       T+K  +     L  E  + RK+      HPN++ L+D  ++++  +L+
Sbjct: 63  -----------NTKKLSARDFQKLEREARICRKL-----QHPNIVRLHDSIQEESFHYLV 106

Query: 121 LELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRE 180
            +L +GGELF+ IVA+E Y E  A+  I+QI E +A  H   IVHR+LKPEN L  +  +
Sbjct: 107 FDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAK 166

Query: 181 DSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSG 240
            + +K+ DFGL+     ++   G  G+  Y+SPE L +D  +   D+W+ GVILYILL G
Sbjct: 167 GAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226

Query: 241 YPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHP 300
           YPPF  +   +    I AG + +    W  ++  AK LI S+LTV+P +R +A + L  P
Sbjct: 227 YPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVP 286

Query: 301 WVIGDSAKEEEM-DAEIVSRLQSFNARRKLRAAAIASVLSSTIFLRRTKKLKNLLGSHDL 359
           W+         +   + V  L+ FNARRKL+ A + +++++                   
Sbjct: 287 WICNRERVASAIHRQDTVDCLKKFNARRKLKGAILTTMIAT------------------- 327

Query: 360 NEEEIQNLRIHFRTICANGDNATLSEFEEVLKAMN 394
               + NL  +       G  +T+ E  E  + ++
Sbjct: 328 --RNLSNLGRNLLNKKEQGPPSTIKESSESSQTID 360

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score =  360 bits (927), Expect = e-122
 Identities = 108/358 (30%), Positives = 179/358 (50%), Gaps = 35/358 (9%)

Query: 5   TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSS 64
            +K+ D Y++ + LG G F++V++  +K+ G   + A K +++  S              
Sbjct: 7   QQKVEDFYDIGEELGSGQFAIVKKCREKSTGL--EYAAKFIKKRQSRA------------ 52

Query: 65  SSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELC 124
                      +  V    +  E+ ++R++      HPN+I L+DVYE++  V LILEL 
Sbjct: 53  ----------SRRGVCREEIEREVSILRQV-----LHPNIITLHDVYENRTDVVLILELV 97

Query: 125 SGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSP- 183
           SGGELFD +  +E   E  A + I+QI +G+  LH   I H DLKPEN + L+     P 
Sbjct: 98  SGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPH 157

Query: 184 LKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPP 243
           +K++DFGL+           +FG+ ++V+PE +  + +  ++DMWS+GVI YILLSG  P
Sbjct: 158 IKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217

Query: 244 FIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVI 303
           F+  + ++    I A  + F E+ +   S  AK  I  LL  +  +R + QE L HPW+ 
Sbjct: 218 FLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWIT 277

Query: 304 GDSAKEEEMDAEIVS---RLQSFNARRKLRAAAIASVLSSTIFLRRTKKLKNLLGSHD 358
               ++  +  E V      +    RR+ + +     L +   L R+   K  L + +
Sbjct: 278 PVDTQQAMVRRESVVNLENFKKQYVRRRWKLSFSIVSLCNH--LTRSLMKKVHLRTSE 333

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score =  351 bits (903), Expect = e-119
 Identities = 103/349 (29%), Positives = 172/349 (49%), Gaps = 38/349 (10%)

Query: 5   TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSS 64
            +K+ D Y++ + LG G F++V++  +K+ G   + A K +++  S              
Sbjct: 7   QQKVEDFYDIGEELGSGQFAIVKKCREKSTGL--EYAAKFIKKRQSRA------------ 52

Query: 65  SSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELC 124
                      +  VS   +  E+ ++R++      H NVI L+DVYE++  V LILEL 
Sbjct: 53  ----------SRRGVSREEIEREVSILRQV-----LHHNVITLHDVYENRTDVVLILELV 97

Query: 125 SGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSP- 183
           SGGELFD +  +E   E  A + I+QI +G+  LH   I H DLKPEN + L+     P 
Sbjct: 98  SGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPH 157

Query: 184 LKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPP 243
           +K++DFGL+           +FG+ ++V+PE +  + +  ++DMWS+GVI YILLSG  P
Sbjct: 158 IKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217

Query: 244 FIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVI 303
           F+  + ++    I +  + F E+ + + S  AK  I  LL  +  +R + QE L HPW+ 
Sbjct: 218 FLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWIT 277

Query: 304 GDSAKEEEMDAEIVS---RLQSFNARRKLRAAAIASVLSSTIFLRRTKK 349
               ++  +  E V      +    RR+ + +                +
Sbjct: 278 PVDNQQAMVRRESVVNLENFRKQYVRRRWKLSFSI-----VSLCNHLTR 321

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score =  350 bits (900), Expect = e-118
 Identities = 103/340 (30%), Positives = 167/340 (49%), Gaps = 37/340 (10%)

Query: 2   GQETRKLTDEYEVTD-ILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSR 60
            Q      + Y +T   LGRG F+VVR+ I K+ G+  + A K                 
Sbjct: 20  FQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQ--EYAAK----------------- 60

Query: 61  GSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLI 120
                    F   R++     A + +EI V+          P VI+L++VYE+ + + LI
Sbjct: 61  ---------FLKKRRRGQDCRAEILHEIAVLELA----KSCPRVINLHEVYENTSEIILI 107

Query: 121 LELCSGGELFDRIVAQ--ERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLND 178
           LE  +GGE+F   + +  E   E     +I+QI EG+  LHQ NIVH DLKP+N L  + 
Sbjct: 108 LEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSI 167

Query: 179 REDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILL 238
                +KI+DFG+S   G+   +  + G+ +Y++PE L  D IT+ +DMW++G+I Y+LL
Sbjct: 168 YPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLL 227

Query: 239 SGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN 298
           +   PF+ + N++    I      + E+T+ ++S  A   I SLL  +P +RP+A+  L+
Sbjct: 228 THTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS 287

Query: 299 HPWV--IGDSAKEEEMDAEIVSRLQSFNARRKLRAAAIAS 336
           H W+            +    S+ Q  + R      + +S
Sbjct: 288 HSWLQQWDFENLFHPEETSSSSQTQDHSVRSSEDKTSKSS 327

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score =  349 bits (897), Expect = e-117
 Identities = 104/364 (28%), Positives = 169/364 (46%), Gaps = 38/364 (10%)

Query: 1   MGQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSR 60
           M  +     D YE+ +++G+G FSVVRR I +  G+  Q A+K +               
Sbjct: 15  MADDDVLFEDVYELCEVIGKGPFSVVRRCINRETGQ--QFAVKIVDVAK----------- 61

Query: 61  GSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLI 120
                     F +   +S  D  L  E  +   +      HP++++L + Y     ++++
Sbjct: 62  ----------FTSSPGLSTED--LKREASICHML-----KHPHIVELLETYSSDGMLYMV 104

Query: 121 LELCSGGELFDRIVAQER----YMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFL 176
            E   G +L   IV +      Y E  A+  +RQI E L   H  NI+HRD+KP   L  
Sbjct: 105 FEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLA 164

Query: 177 NDREDSPLKIMDFGLS-SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY 235
           +    +P+K+  FG++  +        G  G+  +++PE + ++      D+W  GVIL+
Sbjct: 165 SKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILF 224

Query: 236 ILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQE 295
           ILLSG  PF   +  +  + I+ G++    + W +IS SAK L+  +L +DP  R +  E
Sbjct: 225 ILLSGCLPFYG-TKERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYE 283

Query: 296 LLNHPWVIGDSAKEEEM-DAEIVSRLQSFNARRKLRAAAIASVLSSTIFLRRTKKLKNLL 354
            LNHPW+        ++   E V +L+ FNARRKL+ A +A  +SS  F          L
Sbjct: 284 ALNHPWLKERDRYAYKIHLPETVEQLRKFNARRKLKGAVLA-AVSSHKFNSFYGDPPEEL 342

Query: 355 GSHD 358
               
Sbjct: 343 PDFS 346

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score =  346 bits (889), Expect = e-116
 Identities = 102/337 (30%), Positives = 172/337 (51%), Gaps = 33/337 (9%)

Query: 5   TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSS 64
              + D Y+  + LG G F+VV++  +K+ G   Q A K +++  + +            
Sbjct: 6   QENVDDYYDTGEELGSGQFAVVKKCREKSTGL--QYAAKFIKKRRTKS------------ 51

Query: 65  SSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELC 124
                      +  VS   +  E+ ++++I      HPNVI L++VYE++  V LILEL 
Sbjct: 52  ----------SRRGVSREDIEREVSILKEI-----QHPNVITLHEVYENKTDVILILELV 96

Query: 125 SGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLN-DREDSP 183
           +GGELFD +  +E   E  A   ++QI  G+  LH   I H DLKPEN + L+ +     
Sbjct: 97  AGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR 156

Query: 184 LKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPP 243
           +KI+DFGL+    + +    +FG+ ++V+PE +  + +  ++DMWS+GVI YILLSG  P
Sbjct: 157 IKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216

Query: 244 FIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVI 303
           F+  + ++    + A  + F ++ + N S+ AK  I  LL  DP +R + Q+ L HPW+ 
Sbjct: 217 FLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276

Query: 304 GDSAKEEEMDAEIVS---RLQSFNARRKLRAAAIASV 337
               ++            + + F AR+K    +   +
Sbjct: 277 PKDTQQALSRKASAVNMEKFKKFAARKKSNNGSGGGL 313

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score =  340 bits (875), Expect = e-115
 Identities = 105/308 (34%), Positives = 160/308 (51%), Gaps = 33/308 (10%)

Query: 5   TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSS 64
           + K +D Y+V + LG+G FSVVRR + KT G   + A K                     
Sbjct: 1   STKFSDNYDVKEELGKGAFSVVRRCVHKTTGL--EFAAKI-------------------- 38

Query: 65  SSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELC 124
                   T+K  +     L  E  + RK+      HPN++ L+D  ++++  +L+ +L 
Sbjct: 39  ------INTKKLSARDFQKLEREARICRKL-----QHPNIVRLHDSIQEESFHYLVFDLV 87

Query: 125 SGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPL 184
           +GGELF+ IVA+E Y E  A+  I+QI E +A  H   IVHR+LKPEN L  +  + + +
Sbjct: 88  TGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAV 147

Query: 185 KIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF 244
           K+ DFGL+     ++   G  G+  Y+SPE L +D  +   D+W+ GVILYILL GYPPF
Sbjct: 148 KLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 207

Query: 245 IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIG 304
             +   +    I AG + +    W  ++  AK LI S+LTV+P +R +A + L  PW+  
Sbjct: 208 WDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICN 267

Query: 305 DSAKEEEM 312
                  +
Sbjct: 268 RERVASAI 275

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score =  340 bits (874), Expect = e-114
 Identities = 89/336 (26%), Positives = 157/336 (46%), Gaps = 41/336 (12%)

Query: 6   RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSS 65
           ++L ++Y + + LGRG F +V R ++ +  +      K                      
Sbjct: 1   KELYEKYMIAEDLGRGEFGIVHRCVETSSKK--TYMAK---------------------- 36

Query: 66  SQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCS 125
               F   +        L+  EI ++         H N++ L++ +E    + +I E  S
Sbjct: 37  ----FVKVKGT---DQVLVKKEISILNIA-----RHRNILHLHESFESMEELVMIFEFIS 84

Query: 126 GGELFDRIVAQE-RYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPL 184
           G ++F+RI        E    + + Q+ E L  LH  NI H D++PEN ++   R  S +
Sbjct: 85  GLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQT-RRSSTI 143

Query: 185 KIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF 244
           KI++FG +      D    LF + +Y +PE    D +++ +DMWSLG ++Y+LLSG  PF
Sbjct: 144 KIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPF 203

Query: 245 IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIG 304
           +A++N+Q  + IM  E++F E+ +K IS  A   +  LL  +   R +A E L HPW+  
Sbjct: 204 LAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQ 263

Query: 305 DSAKEEEMDAEIVSRLQSFNARRKLRAAAIASVLSS 340
              +   +  +++  L+       L    +  V+S+
Sbjct: 264 KIER---VSTKVIRTLKHRRYYHTLIKKDLNMVVSA 296

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score =  341 bits (877), Expect = e-114
 Identities = 97/367 (26%), Positives = 169/367 (46%), Gaps = 41/367 (11%)

Query: 5   TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSS 64
              + D Y++ + LG G F VV R ++K  G       K                     
Sbjct: 46  QGSVYDYYDILEELGSGAFGVVHRCVEKATGR--VFVAK--------------------- 82

Query: 65  SSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELC 124
                F  T   +      + NEI +M ++      HP +I+L+D +ED+  + LILE  
Sbjct: 83  -----FINTPYPLDKYT--VKNEISIMNQL-----HHPKLINLHDAFEDKYEMVLILEFL 130

Query: 125 SGGELFDRIVAQE-RYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSP 183
           SGGELFDRI A++ +  E      +RQ  EGL  +H+ +IVH D+KPEN +    ++ S 
Sbjct: 131 SGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCET-KKASS 189

Query: 184 LKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPP 243
           +KI+DFGL++     + V     + ++ +PE + ++ +   +DMW++GV+ Y+LLSG  P
Sbjct: 190 VKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSP 249

Query: 244 FIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVI 303
           F  + + +  Q +   ++ F E  + ++S  AK  I +LL  +P +R +  + L HPW+ 
Sbjct: 250 FAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLK 309

Query: 304 GDSAKEEEMDAEIVSRLQSFNARRKLRAAAIA----SVLSSTIFLRRTKKLKNLLGSHDL 359
           GD +                  + K             +++   LR+ +  +  +     
Sbjct: 310 GDHSNLTSRIPSSRYNKIRQKIKEKYADWPAPQPAIGRIANFSSLRKHRPQEYQIYDSYF 369

Query: 360 NEEEIQN 366
           + +E   
Sbjct: 370 DRKEAVP 376

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score =  337 bits (867), Expect = e-114
 Identities = 95/305 (31%), Positives = 160/305 (52%), Gaps = 34/305 (11%)

Query: 5   TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSS 64
                + Y +  +LG+G F  V +   +   +  + A+K +                   
Sbjct: 17  QGTFAERYNIVCMLGKGSFGEVLKCKDRITQQ--EYAVKVI------------------- 55

Query: 65  SSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELC 124
                        +   + +  E+ +++K+      HPN++ L+++ ED +  +++ EL 
Sbjct: 56  -------NKASAKNKDTSTILREVELLKKL-----DHPNIMKLFEILEDSSSFYIVGELY 103

Query: 125 SGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPL 184
           +GGELFD I+ ++R+ E  AA +I+Q+  G+  +H+ NIVHRDLKPEN L  +  +D  +
Sbjct: 104 TGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDI 163

Query: 185 KIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF 244
           KI+DFGLS+       +    G+  Y++PE +L+     K D+WS GVILYILLSG PPF
Sbjct: 164 KIIDFGLSTCFQQNTKMKDRIGTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSGTPPF 222

Query: 245 IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIG 304
             ++     + +  G+++F    W+ IS  AK LI  +LT  P+ R +A + L HPW+  
Sbjct: 223 YGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQK 282

Query: 305 DSAKE 309
            S++E
Sbjct: 283 YSSEE 287

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score =  338 bits (868), Expect = e-113
 Identities = 101/365 (27%), Positives = 181/365 (49%), Gaps = 58/365 (15%)

Query: 1   MGQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSR 60
           + + + + TD YEV + +G G +SV +R I K      + A+K + +             
Sbjct: 13  LHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNM--EFAVKIIDK------------- 57

Query: 61  GSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLI 120
                          +   ++     EI ++ +       HPN+I L DVY+D   V+++
Sbjct: 58  --------------SKRDPTE-----EIEILLR----YGQHPNIITLKDVYDDGKYVYVV 94

Query: 121 LELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRE 180
            EL  GGEL D+I+ Q+ + E  A+AV+  I + +  LH   +VHRDLKP N L++++  
Sbjct: 95  TELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESG 154

Query: 181 D-SPLKIMDFGLSSV-----EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVIL 234
           +   ++I DFG +            P      + ++V+PE L +    +  D+WSLGV+L
Sbjct: 155 NPESIRICDFGFAKQLRAENGLLMTPC----YTANFVAPEVLERQGYDAACDIWSLGVLL 210

Query: 235 YILLSGYPPFIAQSNRQKQQM---IMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRP 291
           Y +L+GY PF    +   +++   I +G+FS     W ++S +AK L+S +L VDP++R 
Sbjct: 211 YTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRL 270

Query: 292 SAQELLNHPWVIGDS-AKEEEMDAEIVSRL------QSFNARRKLRAAAIASVLSSTIFL 344
           +A  +L HPW++      + +++ +    L       +++A  + ++  +  V  ST+  
Sbjct: 271 TAALVLRHPWIVHWDQLPQYQLNRQDAPHLVKGAMAATYSALNRNQSPVLEPVGRSTLAQ 330

Query: 345 RRTKK 349
           RR  K
Sbjct: 331 RRGIK 335

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score =  334 bits (860), Expect = e-113
 Identities = 97/307 (31%), Positives = 163/307 (53%), Gaps = 30/307 (9%)

Query: 8   LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQ 67
           + D YE+ + LG G F++VR+  +K  G+  + A K +++   ++               
Sbjct: 3   VEDHYEMGEELGSGQFAIVRKCRQKGTGK--EYAAKFIKKRRLSS--------------- 45

Query: 68  IGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGG 127
                   +  VS   +  E+ ++R+I      HPN+I L+D++E++  V LILEL SGG
Sbjct: 46  -------SRRGVSREEIEREVNILREI-----RHPNIITLHDIFENKTDVVLILELVSGG 93

Query: 128 ELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLN-DREDSPLKI 186
           ELFD +  +E   E  A   ++QI +G+  LH   I H DLKPEN + L+ +  +  +K+
Sbjct: 94  ELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKL 153

Query: 187 MDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIA 246
           +DFG++      +    +FG+ ++V+PE +  + +  ++DMWS+GVI YILLSG  PF+ 
Sbjct: 154 IDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 213

Query: 247 QSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDS 306
           ++ ++    I A  + F E+ + N S  AK  I  LL  DP RR +  + L H W+    
Sbjct: 214 ETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIR 273

Query: 307 AKEEEMD 313
            +    +
Sbjct: 274 RRNVRGE 280

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score =  332 bits (854), Expect = e-111
 Identities = 101/344 (29%), Positives = 161/344 (46%), Gaps = 37/344 (10%)

Query: 1   MGQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSR 60
           M    + L DEY ++  LG G    V+   ++   +  +VAIK + +             
Sbjct: 1   MSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCK--KVAIKIISK------------- 45

Query: 61  GSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLI 120
                 +      R+     +  +  EI +++K+      HP +I + + ++ ++  +++
Sbjct: 46  -----RKFAIGSAREADPALN--VETEIEILKKL-----NHPCIIKIKNFFDAED-YYIV 92

Query: 121 LELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRE 180
           LEL  GGELFD++V  +R  E        Q+   +  LH+  I+HRDLKPEN L  +  E
Sbjct: 93  LELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEE 152

Query: 181 DSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRI---TSKSDMWSLGVILYIL 237
           D  +KI DFG S + G T  +  L G+  Y++PE L+           D WSLGVIL+I 
Sbjct: 153 DCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 212

Query: 238 LSGYPPFIAQSNRQK-QQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
           LSGYPPF     +   +  I +G+++F  + W  +S  A  L+  LL VDP  R + +E 
Sbjct: 213 LSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEA 272

Query: 297 LNHPWVIGDSAKEEEMDAEIVSRLQSFNARRKLRAAAIASVLSS 340
           L HPW+     ++E+M  +    L   N    L         S 
Sbjct: 273 LRHPWL-----QDEDMKRKFQDLLSEENESTALPQVLAQPSTSR 311

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score =  331 bits (852), Expect = e-111
 Identities = 98/356 (27%), Positives = 163/356 (45%), Gaps = 67/356 (18%)

Query: 4   ETRKLTDEYEVT---DILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSR 60
           +       Y++      LG G FS+ R+ + K   +    A+K + +             
Sbjct: 2   KDSPFYQHYDLDLKDKPLGEGSFSICRKCVHKKSNQ--AFAVKIISK------------- 46

Query: 61  GSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLI 120
                        R + +        EI  ++        HPN++ L++V+ DQ    L+
Sbjct: 47  -------------RMEANTQ-----KEITALKL----CEGHPNIVKLHEVFHDQLHTFLV 84

Query: 121 LELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRE 180
           +EL +GGELF+RI  ++ + E  A+ ++R++   ++ +H   +VHRDLKPEN LF ++ +
Sbjct: 85  MELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDEND 144

Query: 181 DSPLKIMDFGLSSV-----EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY 235
           +  +KI+DFG + +     +    P      ++ Y +PE L Q+      D+WSLGVILY
Sbjct: 145 NLEIKIIDFGFARLKPPDNQPLKTPC----FTLHYAAPELLNQNGYDESCDLWSLGVILY 200

Query: 236 ILLSGYPPFIAQSNRQKQ-------QMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPN 288
            +LSG  PF +              + I  G+FSF  + WKN+S  AK LI  LLTVDPN
Sbjct: 201 TMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPN 260

Query: 289 RRPSAQELLNHPWVIGDSA----------KEEEMDAEIVSRLQS-FNARRKLRAAA 333
           +R     L  + W+   S                 A + + +++ F+A  K +   
Sbjct: 261 KRLKMSGLRYNEWLQDGSQLSSNPLMTPDILGSSGAAVHTCVKATFHAFNKYKREG 316

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score =  330 bits (848), Expect = e-111
 Identities = 101/314 (32%), Positives = 148/314 (47%), Gaps = 34/314 (10%)

Query: 2   GQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRG 61
              T    + YE  +ILGRG  SVVRR I K   +  + A+K +                
Sbjct: 9   SHSTHGFYENYEPKEILGRGVSSVVRRCIHKPTCK--EYAVKIIDV-------------- 52

Query: 62  SSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLIL 121
                  G   + ++V         E+ ++RK    VS HPN+I L D YE      L+ 
Sbjct: 53  -----TGGGSFSAEEVQELREATLKEVDILRK----VSGHPNIIQLKDTYETNTFFFLVF 103

Query: 122 ELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRED 181
           +L   GELFD +  +    E     ++R + E + ALH+ NIVHRDLKPEN L     +D
Sbjct: 104 DLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILL---DDD 160

Query: 182 SPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKS------DMWSLGVILY 235
             +K+ DFG S      + +  + G+  Y++PE +      +        DMWS GVI+Y
Sbjct: 161 MNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMY 220

Query: 236 ILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQE 295
            LL+G PPF  +      +MIM+G + F    W + S + K L+S  L V P +R +A+E
Sbjct: 221 TLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEE 280

Query: 296 LLNHPWVIGDSAKE 309
            L HP+      +E
Sbjct: 281 ALAHPFFQQYVVEE 294

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score =  328 bits (843), Expect = e-110
 Identities = 99/309 (32%), Positives = 156/309 (50%), Gaps = 36/309 (11%)

Query: 2   GQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRG 61
           G     +   Y + + +GRG +  V+  ++K      + A K +                
Sbjct: 1   GSTKGDINQYYTLENTIGRGSWGEVKIAVQKGTRI--RRAAKKI---------------- 42

Query: 62  SSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLIL 121
                     P      V       EI +M+ +      HPN+I LY+ +ED   ++L++
Sbjct: 43  ----------PKYFVEDVDR--FKQEIEIMKSL-----DHPNIIRLYETFEDNTDIYLVM 85

Query: 122 ELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRED 181
           ELC+GGELF+R+V +  + E  AA +++ +   +A  H+ N+ HRDLKPEN LFL D  D
Sbjct: 86  ELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPD 145

Query: 182 SPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGY 241
           SPLK++DFGL++       +    G+  YVSP+ +L+     + D WS GV++Y+LL GY
Sbjct: 146 SPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQ-VLEGLYGPECDEWSAGVMMYVLLCGY 204

Query: 242 PPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPW 301
           PPF A ++ +    I  G F+F E+ W N+S  A+ LI  LLT  P +R ++ + L H W
Sbjct: 205 PPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEW 264

Query: 302 VIGDSAKEE 310
                +   
Sbjct: 265 FEKQLSSSP 273

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score =  337 bits (865), Expect = e-110
 Identities = 95/386 (24%), Positives = 160/386 (41%), Gaps = 38/386 (9%)

Query: 5   TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSS 64
              + D Y++ + LG G F VV R  ++  G     A K                     
Sbjct: 152 HDHVLDHYDIHEELGTGAFGVVHRVTERATGN--NFAAK--------------------- 188

Query: 65  SSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELC 124
                F  T  +       +  EI  M  +      HP +++L+D +ED N + +I E  
Sbjct: 189 -----FVMTPHESDKET--VRKEIQTMSVL-----RHPTLVNLHDAFEDDNEMVMIYEFM 236

Query: 125 SGGELFDRIVAQE-RYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSP 183
           SGGELF+++  +  +  E  A   +RQ+ +GL  +H+ N VH DLKPEN +F   +  + 
Sbjct: 237 SGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTT-KRSNE 295

Query: 184 LKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPP 243
           LK++DFGL++       V    G+ ++ +PE      +   +DMWS+GV+ YILLSG  P
Sbjct: 296 LKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSP 355

Query: 244 FIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVI 303
           F  +++ +  + + + +++  +  +  IS   K  I  LL  DPN R +  + L HPW+ 
Sbjct: 356 FGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLT 415

Query: 304 GDSAKEEEMDAEIVSRLQSFNARRKLRAAAIASVLSSTIFLRRTKKLKNLLGSHDLNEEE 363
             +A   +      SR        K +  A    L     +     L+          + 
Sbjct: 416 PGNAPGRDSQIP-SSRYTKIRDSIKTKYDAWPEPLPPLGRISNYSSLRKHRPQEYSIRDA 474

Query: 364 IQNLRIHFRTICANGDNATLSEFEEV 389
             +                + E +  
Sbjct: 475 FWDRSEAQPRFIVKPYGTEVGEGQSA 500

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score =  328 bits (843), Expect = e-109
 Identities = 103/329 (31%), Positives = 163/329 (49%), Gaps = 44/329 (13%)

Query: 5   TRKLTDEYEV--TDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGS 62
              +   Y V  T+ILG G F  V +  +   G   ++A K                   
Sbjct: 82  QGAVNSFYTVSKTEILGGGRFGQVHKCEETATGL--KLAAK------------------- 120

Query: 63  SSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILE 122
                     TR      +  + NEI VM ++      H N+I LYD +E +N + L++E
Sbjct: 121 -------IIKTRGMKDKEE--VKNEISVMNQL-----DHANLIQLYDAFESKNDIVLVME 166

Query: 123 LCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRED 181
              GGELFDRI+ +     E+     ++QI EG+  +HQ  I+H DLKPEN L +N R+ 
Sbjct: 167 YVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVN-RDA 225

Query: 182 SPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGY 241
             +KI+DFGL+      + +   FG+ ++++PE +  D ++  +DMWS+GVI Y+LLSG 
Sbjct: 226 KQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGL 285

Query: 242 PPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPW 301
            PF+  ++ +    I+A  +   ++ +++IS  AK+ IS LL  + + R SA E L HPW
Sbjct: 286 SPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPW 345

Query: 302 VIGDSAKEEEMDAEI----VSRLQSFNAR 326
            + D      + A+      S  Q F  +
Sbjct: 346 -LSDHKLHSRLSAQKKKNRGSDAQDFVTK 373

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score =  325 bits (836), Expect = e-109
 Identities = 95/344 (27%), Positives = 157/344 (45%), Gaps = 63/344 (18%)

Query: 5   TRKLTDEYEVT-DILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSS 63
           + +  D Y++  D+LG G  + V+  I     +  + A+K + +                
Sbjct: 7   SGRFEDVYQLQEDVLGEGAHARVQTCINLITSQ--EYAVKIIEK---------------- 48

Query: 64  SSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILEL 123
                     +     S   +  E+ ++ +       H NV++L + +E+++  +L+ E 
Sbjct: 49  ----------QPGHIRSR--VFREVEMLYQ----CQGHRNVLELIEFFEEEDRFYLVFEK 92

Query: 124 CSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSP 183
             GG +   I  +  + E+ A+ V++ +A  L  LH   I HRDLKPEN L  +  + SP
Sbjct: 93  MRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSP 152

Query: 184 LKIMDFGLSSV--------EGYTDPVVGLFGSIDYVSPEALLQDRITSKS-----DMWSL 230
           +KI DF L S            T  ++   GS +Y++PE +      +       D+WSL
Sbjct: 153 VKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSL 212

Query: 231 GVILYILLSGYPPFIAQSNRQKQ---------------QMIMAGEFSFYEQTWKNISSSA 275
           GVILYILLSGYPPF+ +                     + I  G++ F ++ W +IS +A
Sbjct: 213 GVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAA 272

Query: 276 KQLISSLLTVDPNRRPSAQELLNHPWVIGDSAKEEEMDAEIVSR 319
           K LIS LL  D  +R SA ++L HPWV G + +       ++ R
Sbjct: 273 KDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPENTLPTPMVLQR 316

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score =  327 bits (841), Expect = e-108
 Identities = 97/371 (26%), Positives = 161/371 (43%), Gaps = 59/371 (15%)

Query: 1   MGQETRKLTDEYEVTD-ILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGS 59
           +  +   + D+Y+VT  +LG G    V +   K   E  + A+K L+             
Sbjct: 52  LQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQE--KFALKMLQDC----------- 98

Query: 60  RGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYED----QN 115
                                      E+ +  +     S  P+++ + DVYE+    + 
Sbjct: 99  ----------------------PKARREVELHWR----ASQCPHIVRIVDVYENLYAGRK 132

Query: 116 GVHLILELCSGGELFDRIVAQ--ERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENC 173
            + +++E   GGELF RI  +  + + E  A+ +++ I E +  LH  NI HRD+KPEN 
Sbjct: 133 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENL 192

Query: 174 LFLNDREDSPLKIMDFGLSSV----EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWS 229
           L+ + R ++ LK+ DFG +         T P      +  YV+PE L  ++     DMWS
Sbjct: 193 LYTSKRPNAILKLTDFGFAKETTSHNSLTTPC----YTPYYVAPEVLGPEKYDKSCDMWS 248

Query: 230 LGVILYILLSGYPPFIAQSNRQKQQM----IMAGEFSFYEQTWKNISSSAKQLISSLLTV 285
           LGVI+YILL GYPPF +             I  G++ F    W  +S   K LI +LL  
Sbjct: 249 LGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKT 308

Query: 286 DPNRRPSAQELLNHPWVIGDSAKEEEMDAEIVSRLQSFNARRKLRAAAIASVLSSTIFLR 345
           +P +R +  E +NHPW++  +   +         L+    R +     + S L++     
Sbjct: 309 EPTQRMTITEFMNHPWIMQSTKVPQTP-LHTSRVLKEDKERWEDVKEEMTSALATMRVDY 367

Query: 346 RTKKLKNLLGS 356
              K+K +  +
Sbjct: 368 EQIKIKKIEDA 378

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score =  323 bits (830), Expect = e-107
 Identities = 92/307 (29%), Positives = 150/307 (48%), Gaps = 35/307 (11%)

Query: 2   GQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRG 61
               ++   +Y+  D++GRG  SVVRR + +  G   + A+K +                
Sbjct: 86  WAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGH--EFAVKIMEVTAERL--------- 134

Query: 62  SSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLIL 121
                      + +Q+         E  ++R+    V+ HP++I L D YE  + + L+ 
Sbjct: 135 -----------SPEQLEEVREATRRETHILRQ----VAGHPHIITLIDSYESSSFMFLVF 179

Query: 122 ELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRED 181
           +L   GELFD +  +    E    +++R + E ++ LH  NIVHRDLKPEN L     ++
Sbjct: 180 DLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILL---DDN 236

Query: 182 SPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITS------KSDMWSLGVILY 235
             +++ DFG S      + +  L G+  Y++PE L      +      + D+W+ GVIL+
Sbjct: 237 MQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILF 296

Query: 236 ILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQE 295
            LL+G PPF  +      +MIM G++ F    W + SS+ K LIS LL VDP  R +A++
Sbjct: 297 TLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQ 356

Query: 296 LLNHPWV 302
            L HP+ 
Sbjct: 357 ALQHPFF 363

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score =  319 bits (821), Expect = e-107
 Identities = 89/302 (29%), Positives = 150/302 (49%), Gaps = 40/302 (13%)

Query: 5   TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSS 64
              + D +     LG G F  V    +++ G   +  IKT+ +                 
Sbjct: 17  QGTIDDLFIFKRKLGSGAFGDVHLVEERSSGL--ERVIKTINK----------------- 57

Query: 65  SSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELC 124
                      +  V    +  EI V++ +      HPN+I +++V+ED + +++++E C
Sbjct: 58  ----------DRSQVPMEQIEAEIEVLKSL-----DHPNIIKIFEVFEDYHNMYIVMETC 102

Query: 125 SGGELFDRIVAQE----RYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRE 180
            GGEL +RIV+ +       E   A +++Q+   LA  H  ++VH+DLKPEN LF +   
Sbjct: 103 EGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSP 162

Query: 181 DSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSG 240
            SP+KI+DFGL+ +    +      G+  Y++PE + +  +T K D+WS GV++Y LL+G
Sbjct: 163 HSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPE-VFKRDVTFKCDIWSAGVVMYFLLTG 221

Query: 241 YPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHP 300
             PF   S  + QQ     E ++     + ++  A  L+  +LT DP RRPSA ++L+H 
Sbjct: 222 CLPFTGTSLEEVQQKATYKEPNY-AVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHE 280

Query: 301 WV 302
           W 
Sbjct: 281 WF 282

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score =  322 bits (827), Expect = e-106
 Identities = 95/315 (30%), Positives = 154/315 (48%), Gaps = 32/315 (10%)

Query: 3   QETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGS 62
              + L DEY ++  LG G    V+   ++   +  +VAI+ + +               
Sbjct: 128 VYPKALRDEYIMSKTLGSGACGEVKLAFERKTCK--KVAIRIISK--------------- 170

Query: 63  SSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILE 122
               +      R+     +  +  EI +++K+      HP +I + + ++ ++  +++LE
Sbjct: 171 ---RKFAIGSAREADPALN--VETEIEILKKL-----NHPCIIKIKNFFDAED-YYIVLE 219

Query: 123 LCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDS 182
           L  GGELFD++V  +R  E        Q+   +  LH+  I+HRDLKPEN L  +  ED 
Sbjct: 220 LMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDC 279

Query: 183 PLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRI---TSKSDMWSLGVILYILLS 239
            +KI DFG S + G T  +  L G+  Y++PE L+           D WSLGVIL+I LS
Sbjct: 280 LIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 339

Query: 240 GYPPFIAQSNRQK-QQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN 298
           GYPPF     +   +  I +G+++F  + W  +S  A  L+  LL VDP  R + +E L 
Sbjct: 340 GYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 399

Query: 299 HPWVIGDSAKEEEMD 313
           HPW+  +  K +  D
Sbjct: 400 HPWLQDEDMKRKFQD 414

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score =  317 bits (815), Expect = e-105
 Identities = 90/345 (26%), Positives = 153/345 (44%), Gaps = 51/345 (14%)

Query: 4   ETRKLTDEYEVT-DILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGS 62
           +   +TD+Y+++  +LG G    V     +  G+  + A+K L                 
Sbjct: 22  KKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQ--KCALKLLYDS-------------- 65

Query: 63  SSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQN----GVH 118
                                   E+    +     S  P+++ + DVYE+ +     + 
Sbjct: 66  -------------------PKARQEVDHHWQ----ASGGPHIVCILDVYENMHHGKRCLL 102

Query: 119 LILELCSGGELFDRIVAQ--ERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFL 176
           +I+E   GGELF RI  +  + + E  AA ++R I   +  LH  NI HRD+KPEN L+ 
Sbjct: 103 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYT 162

Query: 177 NDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYI 236
           +  +D+ LK+ DFG +      + +     +  YV+PE L  ++     DMWSLGVI+YI
Sbjct: 163 SKEKDAVLKLTDFGFAKETT-QNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYI 221

Query: 237 LLSGYPPFIAQSNRQKQ----QMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPS 292
           LL G+PPF + + +       + I  G++ F    W  +S  AKQLI  LL  DP  R +
Sbjct: 222 LLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLT 281

Query: 293 AQELLNHPWVIGDSAKEEEMDAEIVSRLQSFNARRKLRAAAIASV 337
             + +NHPW+       +          +  +   +++    +++
Sbjct: 282 ITQFMNHPWINQSMVVPQTPLHTARVLQEDKDHWDEVKEEMTSAL 326

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score =  303 bits (777), Expect = e-100
 Identities = 89/351 (25%), Positives = 148/351 (42%), Gaps = 72/351 (20%)

Query: 1   MGQETRKLTDEYEVTD-ILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGS 59
           +  +   + D+Y+VT  +LG G    V +   K   E  + A+K L+             
Sbjct: 8   LQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQE--KFALKMLQDC----------- 54

Query: 60  RGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYED----QN 115
                                      E+ +  +     S  P+++ + DVYE+    + 
Sbjct: 55  ----------------------PKARREVELHWR----ASQCPHIVRIVDVYENLYAGRK 88

Query: 116 GVHLILELCSGGELFDRIVAQ--ERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENC 173
            + +++E   GGELF RI  +  + + E  A+ +++ I E +  LH  NI HRD+KPEN 
Sbjct: 89  CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENL 148

Query: 174 LFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVI 233
           L+ + R ++ LK+ DFG                     + E    ++     DMWSLGVI
Sbjct: 149 LYTSKRPNAILKLTDFGF--------------------AKE-TTGEKYDKSCDMWSLGVI 187

Query: 234 LYILLSGYPPFIAQSNRQKQQ----MIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNR 289
           +YILL GYPPF +             I  G++ F    W  +S   K LI +LL  +P +
Sbjct: 188 MYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQ 247

Query: 290 RPSAQELLNHPWVIGDSAKEEEMDAEIVSRLQSFNARRKLRAAAIASVLSS 340
           R +  E +NHPW++  +   +         L+    R +     + S L++
Sbjct: 248 RMTITEFMNHPWIMQSTKVPQTPL-HTSRVLKEDKERWEDVKEEMTSALAT 297

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score =  300 bits (771), Expect = 1e-98
 Identities = 89/358 (24%), Positives = 145/358 (40%), Gaps = 78/358 (21%)

Query: 2   GQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRG 61
           G    +L  +Y +   +G+G + VVR  I+         AIK + +              
Sbjct: 18  GGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRA--IRAIKIMNK-------------- 61

Query: 62  SSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLIL 121
               ++I     +    +       E+ +M+K+      HPN+  LY+VYED+  + L++
Sbjct: 62  ----NKIRQINPKDVERI-----KTEVRLMKKL-----HHPNIARLYEVYEDEQYICLVM 107

Query: 122 ELCSGGELFDRIVAQER----------------------------------------YME 141
           ELC GG L D++                                               E
Sbjct: 108 ELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQRE 167

Query: 142 VGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPV 201
              + ++RQI   L  LH   I HRD+KPEN LF  + +   +K++DFGLS      +  
Sbjct: 168 KLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTN-KSFEIKLVDFGLSKEFYKLNNG 226

Query: 202 VG-----LFGSIDYVSPEAL--LQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQ 254
                    G+  +V+PE L    +    K D WS GV+L++LL G  PF   ++     
Sbjct: 227 EYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTIS 286

Query: 255 MIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAKEEEM 312
            ++  +  F    +  +S  A+ L+S+LL  + + R  A   L HPW+   S K  +M
Sbjct: 287 QVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFSDKIYKM 344

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score =  267 bits (685), Expect = 1e-84
 Identities = 96/394 (24%), Positives = 167/394 (42%), Gaps = 73/394 (18%)

Query: 11  EYEVTDILGRGGF-SVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
            +   D+LG G   ++V RG+     +   VA+K +                        
Sbjct: 25  SFCPKDVLGHGAEGTIVYRGMF----DNRDVAVKRILP---------------------- 58

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
                +  S +D     E+ ++R+       HPNVI  +   +D+   ++ +ELC    L
Sbjct: 59  -----ECFSFAD----REVQLLRE----SDEHPNVIRYFCTEKDRQFQYIAIELC-AATL 104

Query: 130 FDRIVAQE-RYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLK--I 186
            + +  ++  ++ +    +++Q   GLA LH  NIVHRDLKP N L         +K  I
Sbjct: 105 QEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMI 164

Query: 187 MDFGLSSV----EGYTDPVVGLFGSIDYVSPEALLQD---RITSKSDMWSLGVILYILLS 239
            DFGL               G+ G+  +++PE L +D     T   D++S G + Y ++S
Sbjct: 165 SDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVIS 224

Query: 240 -GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN 298
            G  PF     RQ   ++ A          K+    A++LI  ++ +DP +RPSA+ +L 
Sbjct: 225 EGSHPFGKSLQRQANILLGACSLDC-LHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283

Query: 299 HPWV------------IGDSAKEEEMDAEIVSRLQSFNARRKLRA---AAIASVLSSTIF 343
           HP+             + D  ++E +D  IV +L+    R  ++      I   L + + 
Sbjct: 284 HPFFWSLEKQLQFFQDVSDRIEKESLDGPIVKQLER-GGRAVVKMDWRENITVPLQTDLR 342

Query: 344 LRRTKKLKNLLGSHDLNEEEIQNLRIHFRTICAN 377
             RT K  ++    DL    ++N + H+R + A 
Sbjct: 343 KFRTYKGGSVR---DL-LRAMRNKKHHYRELPAE 372

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score =  256 bits (655), Expect = 1e-81
 Identities = 67/344 (19%), Positives = 125/344 (36%), Gaps = 74/344 (21%)

Query: 1   MGQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSR 60
           MG ++      + ++DILG+G  + V RG  K  G+    AIK                 
Sbjct: 1   MGSQS-TSNHLWLLSDILGQGATANVFRGRHKKTGD--LFAIKVFNN------------- 44

Query: 61  GSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVH-- 118
                                 +   E  V++K+      H N++ L+ + E+    H  
Sbjct: 45  --------------ISFLRPVDVQMREFEVLKKLN-----HKNIVKLFAIEEETTTRHKV 85

Query: 119 LILELCSGGELFDRIVAQERYM---EVGAAAVIRQIAEGLAALHQANIVHRDLKPENCL- 174
           LI+E C  G L+  +          E     V+R +  G+  L +  IVHR++KP N + 
Sbjct: 86  LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMR 145

Query: 175 FLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEAL--------LQDRITSKSD 226
            + +   S  K+ DFG +      +  V L+G+ +Y+ P+           Q +  +  D
Sbjct: 146 VIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVD 205

Query: 227 MWSLGVILYILLSGYPPFIAQSNRQKQQMIM---------------------AGEFSFYE 265
           +WS+GV  Y   +G  PF      ++ + +M                       ++S   
Sbjct: 206 LWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDM 265

Query: 266 QTWKNISSSAK----QLISSLLTVDPNRRPSAQELLNHPWVIGD 305
               ++S   +     +++++L  D  +     +       I  
Sbjct: 266 PVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score =  255 bits (652), Expect = 9e-80
 Identities = 92/389 (23%), Positives = 148/389 (38%), Gaps = 79/389 (20%)

Query: 5   TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSS 64
            + L +      ILG G    V             VA+K +                   
Sbjct: 10  EQSLKNLVVSEKILGYGSSGTVVFQGSFQG---RPVAVKRMLI----------------- 49

Query: 65  SSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELC 124
                F            +   EI ++ +  +    HPNVI  Y        +++ LELC
Sbjct: 50  ----DFCD----------IALMEIKLLTESDD----HPNVIRYYCSETTDRFLYIALELC 91

Query: 125 SGGELFDRIVA-------QERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLF-- 175
               L D + +        +   E    +++RQIA G+A LH   I+HRDLKP+N L   
Sbjct: 92  -NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVST 150

Query: 176 --------LNDREDSPLKIMDFGLS-----SVEGYTDPVVGLFGSIDYVSPEALLQD--- 219
                       E+  + I DFGL          +   +    G+  + +PE L +    
Sbjct: 151 SSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNL 210

Query: 220 ----RITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYE---QTWKNI 271
               R+T   D++S+G + Y +LS G  PF  + +R+    I+ G FS  E      +++
Sbjct: 211 QTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESN--IIRGIFSLDEMKCLHDRSL 268

Query: 272 SSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAKEEEMDA-----EIVSRLQSFNAR 326
            + A  LIS ++  DP +RP+A ++L HP     S K E +       EI +R       
Sbjct: 269 IAEATDLISQMIDHDPLKRPTAMKVLRHPLFWPKSKKLEFLLKVSDRLEIENRDPPSALL 328

Query: 327 RKLRAAAIASVLSSTIFLRRTKKLKNLLG 355
            K  A +   + S    ++  K   + L 
Sbjct: 329 MKFDAGSDFVIPSGDWTVKFDKTFMDNLE 357

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score =  245 bits (627), Expect = 1e-77
 Identities = 72/323 (22%), Positives = 125/323 (38%), Gaps = 54/323 (16%)

Query: 11  EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGF 70
            Y +   +G GG S V + + +        AIK +                + + +   +
Sbjct: 29  IYSILKQIGSGGSSKVFQVLNEKKQ---IYAIKYVNL------------EEADNQTLDSY 73

Query: 71  FPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELF 130
                          NEI  + K+         +I LYD       +++++E C   +L 
Sbjct: 74  R--------------NEIAYLNKLQ---QHSDKIIRLYDYEITDQYIYMVME-CGNIDLN 115

Query: 131 DRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFG 190
             +  ++        +  + + E +  +HQ  IVH DLKP N L ++      LK++DFG
Sbjct: 116 SWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM----LKLIDFG 171

Query: 191 LSSVEGYTDPVVGLF---GSIDYVSPEALLQD-----------RITSKSDMWSLGVILYI 236
           +++        V      G+++Y+ PEA+              +I+ KSD+WSLG ILY 
Sbjct: 172 IANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYY 231

Query: 237 LLSGYPPFIAQSNR-QKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQE 295
           +  G  PF    N+  K   I+        +         + ++   L  DP +R S  E
Sbjct: 232 MTYGKTPFQQIINQISKLHAIIDPNHEI--EFPDIPEKDLQDVLKCCLKRDPKQRISIPE 289

Query: 296 LLNHPWVIGDSAKEEEMDAEIVS 318
           LL HP+V   +    +M      
Sbjct: 290 LLAHPYVQIQTHPVNQMAKGTTE 312

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score =  244 bits (626), Expect = 6e-77
 Identities = 76/345 (22%), Positives = 134/345 (38%), Gaps = 61/345 (17%)

Query: 11  EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGF 70
            Y +   +G GG S V + + +        AIK +                + + +   +
Sbjct: 10  IYSILKQIGSGGSSKVFQVLNEKKQI---YAIKYVNL------------EEADNQTLDSY 54

Query: 71  FPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELF 130
                          NEI  + K+         +I LYD       +++++E C   +L 
Sbjct: 55  R--------------NEIAYLNKLQ---QHSDKIIRLYDYEITDQYIYMVME-CGNIDLN 96

Query: 131 DRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFG 190
             +  ++        +  + + E +  +HQ  IVH DLKP N L ++      LK++DFG
Sbjct: 97  SWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM----LKLIDFG 152

Query: 191 LSSVEGYTDPVVGLF---GSIDYVSPEALLQ-----------DRITSKSDMWSLGVILYI 236
           +++        V      G+++Y+ PEA+              +I+ KSD+WSLG ILY 
Sbjct: 153 IANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYY 212

Query: 237 LLSGYPPFIAQSNR-QKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQE 295
           +  G  PF    N+  K   I+        +         + ++   L  DP +R S  E
Sbjct: 213 MTYGKTPFQQIINQISKLHAIIDPNHEI--EFPDIPEKDLQDVLKCCLKRDPKQRISIPE 270

Query: 296 LLNHPWVIGDSAKEEEMDA-------EIVSRLQSFNARRKLRAAA 333
           LL HP+V   +    +M          ++ +L   N+   +  AA
Sbjct: 271 LLAHPYVQIQTHPVNQMAKGTTEEMKYVLGQLVGLNSPNSILKAA 315

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score =  241 bits (618), Expect = 3e-76
 Identities = 77/345 (22%), Positives = 135/345 (39%), Gaps = 75/345 (21%)

Query: 7   KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSS 66
           +   ++E   +LG+G F  V +            AIK +R                    
Sbjct: 3   RYASDFEEIAVLGQGAFGQVVKARNALDSR--YYAIKKIRH------------------- 41

Query: 67  QIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVH-------- 118
                    +  +S  L  +E++++  +      H  V+  Y  + ++            
Sbjct: 42  --------TEEKLSTIL--SEVMLLASL-----NHQYVVRYYAAWLERRNFVKPMTAVKK 86

Query: 119 -----LILELCSGGELFDRIVAQERYMEVGAAAVI-RQIAEGLAALHQANIVHRDLKPEN 172
                + +E C  G L+D I ++    +      + RQI E L+ +H   I+HRDLKP N
Sbjct: 87  KSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMN 146

Query: 173 CLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF---------------GSIDYVSPEALL 217
            +F++  E   +KI DFGL+     +  ++ L                G+  YV+ E +L
Sbjct: 147 -IFID--ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATE-VL 202

Query: 218 QDR--ITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSA 275
                   K DM+SLG+I + ++  YP           + + +    F      N     
Sbjct: 203 DGTGHYNEKIDMYSLGIIFFEMI--YPFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVE 260

Query: 276 KQLISSLLTVDPNRRPSAQELLNHPWVIGDSAKEEEMDAEIVSRL 320
           K++I  L+  DPN+RP A+ LLN  W+      ++E+  E +  L
Sbjct: 261 KKIIRLLIDHDPNKRPGARTLLNSGWL--PVKHQDEVIKEALKSL 303

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score =  242 bits (620), Expect = 2e-75
 Identities = 67/342 (19%), Positives = 125/342 (36%), Gaps = 74/342 (21%)

Query: 1   MGQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSR 60
           MG ++      + ++DILG+G  + V RG  K  G+    AIK                 
Sbjct: 1   MGSQS-TSNHLWLLSDILGQGATANVFRGRHKKTGD--LFAIKVFNN------------- 44

Query: 61  GSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVH-- 118
                                 +   E  V++K+      H N++ L+ + E+    H  
Sbjct: 45  --------------ISFLRPVDVQMREFEVLKKLN-----HKNIVKLFAIEEETTTRHKV 85

Query: 119 LILELCSGGELFDRIVAQERYM---EVGAAAVIRQIAEGLAALHQANIVHRDLKPENCL- 174
           LI+E C  G L+  +          E     V+R +  G+  L +  IVHR++KP N + 
Sbjct: 86  LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMR 145

Query: 175 FLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEAL--------LQDRITSKSD 226
            + +   S  K+ DFG +      +  V L+G+ +Y+ P+           Q +  +  D
Sbjct: 146 VIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVD 205

Query: 227 MWSLGVILYILLSGYPPFIAQSNRQKQQMIM---------------------AGEFSFYE 265
           +WS+GV  Y   +G  PF      ++ + +M                       ++S   
Sbjct: 206 LWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDM 265

Query: 266 QTWKNISSSAK----QLISSLLTVDPNRRPSAQELLNHPWVI 303
               ++S   +     +++++L  D  +     +       I
Sbjct: 266 PVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI 307

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score =  239 bits (612), Expect = 2e-74
 Identities = 76/345 (22%), Positives = 135/345 (39%), Gaps = 61/345 (17%)

Query: 11  EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGF 70
            Y +   +G GG S V + + +        AIK +                + + +   +
Sbjct: 57  IYSILKQIGSGGSSKVFQVLNEKKQI---YAIKYVNL------------EEADNQTLDSY 101

Query: 71  FPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELF 130
                          NEI  + K+         +I LYD       +++++E C   +L 
Sbjct: 102 R--------------NEIAYLNKLQ---QHSDKIIRLYDYEITDQYIYMVME-CGNIDLN 143

Query: 131 DRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFG 190
             +  ++        +  + + E +  +HQ  IVH DLKP N L ++      LK++DFG
Sbjct: 144 SWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM----LKLIDFG 199

Query: 191 LSSVEGYTDPVVGLF---GSIDYVSPEALL-----------QDRITSKSDMWSLGVILYI 236
           +++        V      G+++Y+ PEA+            + +I+ KSD+WSLG ILY 
Sbjct: 200 IANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYY 259

Query: 237 LLSGYPPFIAQSNR-QKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQE 295
           +  G  PF    N+  K   I+        +         + ++   L  DP +R S  E
Sbjct: 260 MTYGKTPFQQIINQISKLHAIIDPNHEI--EFPDIPEKDLQDVLKCCLKRDPKQRISIPE 317

Query: 296 LLNHPWVIGDSAKEEEMDA-------EIVSRLQSFNARRKLRAAA 333
           LL HP+V   +    +M          ++ +L   N+   +  AA
Sbjct: 318 LLAHPYVQIQTHPVNQMAKGTTEEMKYVLGQLVGLNSPNSILKAA 362

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score =  229 bits (587), Expect = 5e-72
 Identities = 82/319 (25%), Positives = 146/319 (45%), Gaps = 47/319 (14%)

Query: 1   MGQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSR 60
           +     +  ++++V ++LG+G F+ V R      G   +VAIK + +             
Sbjct: 2   LATCIGEKIEDFKVGNLLGKGSFAGVYRAESIHTGL--EVAIKMIDK------------- 46

Query: 61  GSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLI 120
                  +      ++V        NE+ +  ++      HP++++LY+ +ED N V+L+
Sbjct: 47  -----KAMYKAGMVQRV-------QNEVKIHCQLK-----HPSILELYNYFEDSNYVYLV 89

Query: 121 LELCSGGELFDRIVAQERYM-EVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDR 179
           LE+C  GE+   +  + +   E  A   + QI  G+  LH   I+HRDL   N L L   
Sbjct: 90  LEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSN-LLLTRN 148

Query: 180 EDSPLKIMDFGLSSVEGYTDPVVGLF----GSIDYVSPEALLQDRITSKSDMWSLGVILY 235
            +  +KI DFGL++                G+ +Y+SPE   +     +SD+WSLG + Y
Sbjct: 149 MN--IKIADFGLATQLKMPH---EKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFY 203

Query: 236 ILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQE 295
            LL G PPF   + +     ++  ++         +S  AK LI  LL  +P  R S   
Sbjct: 204 TLLIGRPPFDTDTVKNTLNKVVLADYEMPS----FLSIEAKDLIHQLLRRNPADRLSLSS 259

Query: 296 LLNHPWVIGDSAKEEEMDA 314
           +L+HP++  +S+ + + + 
Sbjct: 260 VLDHPFMSRNSSTKSKDEG 278

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score =  229 bits (586), Expect = 1e-71
 Identities = 84/297 (28%), Positives = 132/297 (44%), Gaps = 48/297 (16%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
             Y     LG+GGF+           E    A K + +                  S + 
Sbjct: 15  RRYVRGRFLGKGGFAKCFEISDADTKE--VFAGKIVPK------------------SLLL 54

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
               R+++       + EI + R +      H +V+  +  +ED + V ++LELC    L
Sbjct: 55  KPHQREKM-------SMEISIHRSLA-----HQHVVGFHGFFEDNDFVFVVLELCRRRSL 102

Query: 130 FDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDF 189
            +    ++   E  A   +RQI  G   LH+  ++HRDLK  N LFLN+  +  +KI DF
Sbjct: 103 LELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGN-LFLNEDLE--VKIGDF 159

Query: 190 GLSSVEGYTDPVVGLF-----GSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF 244
           GL++   Y     G       G+ +Y++PE L +   + + D+WS+G I+Y LL G PPF
Sbjct: 160 GLATKVEYD----GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 215

Query: 245 IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPW 301
                ++    I   E+S      K+I+  A  LI  +L  DP  RP+  ELLN  +
Sbjct: 216 ETSCLKETYLRIKKNEYSIP----KHINPVAASLIQKMLQTDPTARPTINELLNDEF 268

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score =  229 bits (587), Expect = 3e-71
 Identities = 84/297 (28%), Positives = 132/297 (44%), Gaps = 48/297 (16%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
             Y     LG+GGF+           E    A K + +                  S + 
Sbjct: 41  RRYVRGRFLGKGGFAKCFEISDADTKE--VFAGKIVPK------------------SLLL 80

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
               R+++       + EI + R +      H +V+  +  +ED + V ++LELC    L
Sbjct: 81  KPHQREKM-------SMEISIHRSLA-----HQHVVGFHGFFEDNDFVFVVLELCRRRSL 128

Query: 130 FDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDF 189
            +    ++   E  A   +RQI  G   LH+  ++HRDLK  N LFLN+  +  +KI DF
Sbjct: 129 LELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGN-LFLNEDLE--VKIGDF 185

Query: 190 GLSSVEGYTDPVVGLF-----GSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF 244
           GL++   Y     G       G+ +Y++PE L +   + + D+WS+G I+Y LL G PPF
Sbjct: 186 GLATKVEYD----GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 241

Query: 245 IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPW 301
                ++    I   E+S      K+I+  A  LI  +L  DP  RP+  ELLN  +
Sbjct: 242 ETSCLKETYLRIKKNEYSIP----KHINPVAASLIQKMLQTDPTARPTINELLNDEF 294

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score =  222 bits (569), Expect = 6e-69
 Identities = 81/307 (26%), Positives = 126/307 (41%), Gaps = 48/307 (15%)

Query: 2   GQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRG 61
           G++      EY +  +LG+GGF  V  G + T     QVAIK + R              
Sbjct: 23  GKDREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRL--QVAIKVIPR-------------- 66

Query: 62  SSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLIL 121
               +++  +               E+ ++   V     HP VI L D +E Q G  L+L
Sbjct: 67  ----NRVLGWSPLSDS----VTCPLEVALL-WKVGAGGGHPGVIRLLDWFETQEGFMLVL 117

Query: 122 EL-CSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRE 180
           E      +LFD I  +    E  +     Q+   +   H   +VHRD+K EN L   D  
Sbjct: 118 ERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILI--DLR 175

Query: 181 DSPLKIMDFGLSSVEGYTDPVVGLF----GSIDYVSPEALLQDRIT-SKSDMWSLGVILY 235
               K++DFG  ++    D     +    G+  Y  PE + + +     + +WSLG++LY
Sbjct: 176 RGCAKLIDFGSGAL--LHD---EPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLY 230

Query: 236 ILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQE 295
            ++ G  PF      Q+   I+  E  F       +S     LI   L   P+ RPS +E
Sbjct: 231 DMVCGDIPF---ERDQE---ILEAELHF--PAH--VSPDCCALIRRCLAPKPSSRPSLEE 280

Query: 296 LLNHPWV 302
           +L  PW+
Sbjct: 281 ILLDPWM 287

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score =  232 bits (592), Expect = 1e-68
 Identities = 68/328 (20%), Positives = 124/328 (37%), Gaps = 63/328 (19%)

Query: 3   QETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGS 62
               +    +E+ + LG GGF  V R I +  GE  QVAIK  R+               
Sbjct: 7   SLPTQTCGPWEMKERLGTGGFGYVLRWIHQDTGE--QVAIKQCRQ--------------- 49

Query: 63  SSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVH---- 118
                       +    +      EI +M+K+      HPNV+   +V +    +     
Sbjct: 50  ------------ELSPKNRERWCLEIQIMKKL-----NHPNVVSAREVPDGLQKLAPNDL 92

Query: 119 --LILELCSGGELFDRIVAQERYM---EVGAAAVIRQIAEGLAALHQANIVHRDLKPENC 173
             L +E C GG+L   +   E      E     ++  I+  L  LH+  I+HRDLKPEN 
Sbjct: 93  PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENI 152

Query: 174 LFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVI 233
           +     +    KI+D G +      +      G++ Y++PE L Q + T   D WS G +
Sbjct: 153 VLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTL 212

Query: 234 LYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSS------------------- 274
            +  ++G+ PF+      +    +  + + +   + +++ +                   
Sbjct: 213 AFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAG 272

Query: 275 -AKQLISSLLTVDPNRRPSAQELLNHPW 301
             ++ +  +L     +R +  +  N   
Sbjct: 273 KLERWLQCMLMWHQRQRGTDPQNPNVGC 300

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score =  220 bits (563), Expect = 2e-68
 Identities = 88/301 (29%), Positives = 143/301 (47%), Gaps = 40/301 (13%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
           +++E+   LG+G F  V    +K       +A+K L +                  +Q+ 
Sbjct: 9   EDFEIGRPLGKGKFGNVYLAREKQSKF--ILALKVLFK------------------AQLE 48

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
                 Q+         E+ +   +      HPN++ LY  + D   V+LILE    G +
Sbjct: 49  KAGVEHQL-------RREVEIQSHLR-----HPNILRLYGYFHDATRVYLILEYAPLGTV 96

Query: 130 FDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDF 189
           +  +    ++ E   A  I ++A  L+  H   ++HRD+KPEN L L    +  LKI DF
Sbjct: 97  YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN-LLLGSAGE--LKIADF 153

Query: 190 GLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSN 249
           G  SV   +     L G++DY+ PE +       K D+WSLGV+ Y  L G PPF A + 
Sbjct: 154 GW-SVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 212

Query: 250 RQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAKE 309
           ++  + I   EF+F    +  ++  A+ LIS LL  +P++RP  +E+L HPW+  +S+K 
Sbjct: 213 QETYKRISRVEFTF--PDF--VTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 268

Query: 310 E 310
            
Sbjct: 269 S 269

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score =  220 bits (563), Expect = 7e-68
 Identities = 87/337 (25%), Positives = 152/337 (45%), Gaps = 53/337 (15%)

Query: 4   ETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSS 63
           + +     Y +   +G+G F+ V+       G   +VAIK + +                
Sbjct: 9   DEQPHIGNYRLLKTIGKGNFAKVKLARHILTGR--EVAIKIIDK---------------- 50

Query: 64  SSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILEL 123
                      +    S   L  E+ +M+ +      HPN++ L++V E +  ++LI+E 
Sbjct: 51  ----------TQLNPTSLQKLFREVRIMKILN-----HPNIVKLFEVIETEKTLYLIMEY 95

Query: 124 CSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSP 183
            SGGE+FD +VA  R  E  A +  RQI   +   HQ  IVHRDLK EN L   D  D  
Sbjct: 96  ASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLL--D-ADMN 152

Query: 184 LKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDR--ITSKSDMWSLGVILYILLSGY 241
           +KI DFG S+       +    G+  Y +PE L Q +     + D+WSLGVILY L+SG 
Sbjct: 153 IKIADFGFSNEFTVGGKLDAFCGAPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGS 211

Query: 242 PPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPW 301
            PF  Q+ ++ ++ ++ G++         +S+  + L+   L ++P +R + ++++   W
Sbjct: 212 LPFDGQNLKELRERVLRGKYRIP----FYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRW 267

Query: 302 VIGDSAKEE----------EMDAEIVSRLQSFNARRK 328
           +     ++E            D + +  +      ++
Sbjct: 268 INAGHEEDELKPFVEPELDISDQKRIDIMVGMGYSQE 304

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score =  219 bits (561), Expect = 2e-67
 Identities = 57/350 (16%), Positives = 123/350 (35%), Gaps = 54/350 (15%)

Query: 3   QETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQ-VAIKTLRRIGSTTPYGFPGSRG 61
           +E  K  ++Y +   L +G F+ +       C + N+  A+K   +           S  
Sbjct: 24  KEKDKYINDYRIIRTLNQGKFNKI-----ILCEKDNKFYALKKYEK-----------SLL 67

Query: 62  SSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLIL 121
                       +  +        NE+ ++  I      +   +    +  + + V++I 
Sbjct: 68  EKKRDFTKSNNDKISIKSKYDDFKNELQIITDIK-----NEYCLTCEGIITNYDEVYIIY 122

Query: 122 ELCSGGELFDRIVAQERYMEVG--------AAAVIRQIAEGLAALH-QANIVHRDLKPEN 172
           E      +           +             +I+ +    + +H + NI HRD+KP N
Sbjct: 123 EYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSN 182

Query: 173 CLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITS--KSDMWSL 230
            L   +     +K+ DFG  S       + G  G+ +++ PE    +   +  K D+WSL
Sbjct: 183 ILMDKNGR---VKLSDFGE-SEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSL 238

Query: 231 GVILYILLSGYPPFIAQSNRQK-QQMIMAGEFSF---------------YEQTWKNISSS 274
           G+ LY++     PF  + +  +    I      +                  +   +S+ 
Sbjct: 239 GICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNE 298

Query: 275 AKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAKE-EEMDAEIVSRLQSF 323
               +   L  +P  R ++++ L H W+   + ++  E   E+  + +  
Sbjct: 299 DIDFLKLFLRKNPAERITSEDALKHEWLADTNIEDLREFSKELYKKRKKL 348

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score =  218 bits (558), Expect = 3e-67
 Identities = 85/323 (26%), Positives = 143/323 (44%), Gaps = 50/323 (15%)

Query: 2   GQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRG 61
           G+E   L  +Y+V  +LG GGF  V  GI+ +      VAIK + +              
Sbjct: 35  GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNL--PVAIKHVEK-------------- 78

Query: 62  SSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLIL 121
                +I    +      +   +  E+++++K+    S    VI L D +E  +   LIL
Sbjct: 79  ----DRI----SDWGELPNGTRVPMEVVLLKKVS---SGFSGVIRLLDWFERPDSFVLIL 127

Query: 122 ELCSG-GELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRE 180
           E      +LFD I  +    E  A +   Q+ E +   H   ++HRD+K EN L   D  
Sbjct: 128 ERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI--DLN 185

Query: 181 DSPLKIMDFGLSSVEGYTDPVVGLF----GSIDYVSPEALLQDRIT-SKSDMWSLGVILY 235
              LK++DFG  ++    D    ++    G+  Y  PE +   R     + +WSLG++LY
Sbjct: 186 RGELKLIDFGSGAL--LKD---TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLY 240

Query: 236 ILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQE 295
            ++ G  PF      +  + I+ G+  F     + +SS  + LI   L + P+ RP+ +E
Sbjct: 241 DMVCGDIPF------EHDEEIIRGQVFFR----QRVSSECQHLIRWCLALRPSDRPTFEE 290

Query: 296 LLNHPWVIGDSAKEEEMDAEIVS 318
           + NHPW+      +E  +  + S
Sbjct: 291 IQNHPWMQDVLLPQETAEIHLHS 313

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score =  215 bits (549), Expect = 2e-66
 Identities = 85/307 (27%), Positives = 144/307 (46%), Gaps = 41/307 (13%)

Query: 3   QETRKLT-DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRG 61
              RK T D++++   LG+G F  V    +K       +A+K L +              
Sbjct: 6   MPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKF--IMALKVLFK-------------- 49

Query: 62  SSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLIL 121
               SQ+       Q       L  EI +   +      HPN++ +Y+ + D+  ++L+L
Sbjct: 50  ----SQLEKEGVEHQ-------LRREIEIQSHLR-----HPNILRMYNYFHDRKRIYLML 93

Query: 122 ELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRED 181
           E    GEL+  +    R+ E  +A  + ++A+ L   H+  ++HRD+KPEN L +  + +
Sbjct: 94  EFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPEN-LLMGYKGE 152

Query: 182 SPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGY 241
             LKI DFG  SV   +     + G++DY+ PE +       K D+W  GV+ Y  L G 
Sbjct: 153 --LKIADFGW-SVHAPSLRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGM 209

Query: 242 PPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPW 301
           PPF + S+ +  + I+  +  F    +  +S  +K LIS LL   P +R   + ++ HPW
Sbjct: 210 PPFDSPSHTETHRRIVNVDLKF--PPF--LSDGSKDLISKLLRYHPPQRLPLKGVMEHPW 265

Query: 302 VIGDSAK 308
           V  +S +
Sbjct: 266 VKANSRR 272

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score =  214 bits (548), Expect = 5e-66
 Identities = 78/304 (25%), Positives = 132/304 (43%), Gaps = 35/304 (11%)

Query: 12  YEVTDILGRGGFSVVRRGIKKTCGETNQVAIK-----TLRRIGSTTPYGFPGSRGSSSSS 66
           Y + D +G+G + VV+    +        A+K      L R         P     +   
Sbjct: 15  YTLKDEIGKGSYGVVKLAYNENDNT--YYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGG 72

Query: 67  QIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHL--ILELC 124
            I      +QV         EI +++K+      HPNV+ L +V +D N  HL  + EL 
Sbjct: 73  CIQPRGPIEQVY-------QEIAILKKLD-----HPNVVKLVEVLDDPNEDHLYMVFELV 120

Query: 125 SGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPL 184
           + G + + +   +   E  A    + + +G+  LH   I+HRD+KP N L + +     +
Sbjct: 121 NQGPVME-VPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLL-VGEDGH--I 176

Query: 185 KIMDFGLSSVEGYTDPVVGLF---GSIDYVSPEALLQDRIT---SKSDMWSLGVILYILL 238
           KI DFG+S+   +      L    G+  +++PE+L + R        D+W++GV LY  +
Sbjct: 177 KIADFGVSNE--FKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFV 234

Query: 239 SGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN 298
            G  PF+ +        I +    F +    +I+   K LI+ +L  +P  R    E+  
Sbjct: 235 FGQCPFMDERIMCLHSKIKSQALEFPD--QPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292

Query: 299 HPWV 302
           HPWV
Sbjct: 293 HPWV 296

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score =  211 bits (539), Expect = 7e-65
 Identities = 84/301 (27%), Positives = 134/301 (44%), Gaps = 46/301 (15%)

Query: 7   KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSS 66
              +++++   LG G +  V+  + +   E   VA+K +              R      
Sbjct: 4   PFVEDWDLVQTLGEGAYGEVQLAVNRVTEE--AVAVKIVDM-----------KRAVDCPE 50

Query: 67  QIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSG 126
            I     +            EI + + +      H NV+  Y    + N  +L LE CSG
Sbjct: 51  NI----KK------------EICINKMLN-----HENVVKFYGHRREGNIQYLFLEYCSG 89

Query: 127 GELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKI 186
           GELFDRI       E  A     Q+  G+  LH   I HRD+KPEN L L++R++  LKI
Sbjct: 90  GELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPEN-LLLDERDN--LKI 146

Query: 187 MDFGLSSVEGYTDPVVGLF---GSIDYVSPEALLQDR--ITSKSDMWSLGVILYILLSGY 241
            DFGL++V  Y +    L    G++ YV+PE LL+ R       D+WS G++L  +L+G 
Sbjct: 147 SDFGLATVFRYNNRERLLNKMCGTLPYVAPE-LLKRREFHAEPVDVWSCGIVLTAMLAGE 205

Query: 242 PPFIAQSNRQKQ-QMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHP 300
            P+   S+  ++       +   Y   WK I S+   L+  +L  +P+ R +  ++    
Sbjct: 206 LPWDQPSDSCQEYSDWKEKK--TYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDR 263

Query: 301 W 301
           W
Sbjct: 264 W 264

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score =  208 bits (532), Expect = 6e-64
 Identities = 90/308 (29%), Positives = 136/308 (44%), Gaps = 52/308 (16%)

Query: 2   GQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRG 61
             + R     Y + D LG G F  V+ G  +  G   +VA+K L R              
Sbjct: 3   KHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGH--KVAVKILNR-------------- 46

Query: 62  SSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLIL 121
                +I       ++         EI  ++        HP++I LY V        +++
Sbjct: 47  ----QKIRSLDVVGKIK-------REIQNLKLFR-----HPHIIKLYQVISTPTDFFMVM 90

Query: 122 ELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRED 181
           E  SGGELFD I    R  E+ A  + +QI   +   H+  +VHRDLKPEN + L+   +
Sbjct: 91  EYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPEN-VLLDAHMN 149

Query: 182 SPLKIMDFGLSSVEGYTDPVVGLF-----GSIDYVSPEALLQDR--ITSKSDMWSLGVIL 234
              KI DFGLS++   +D   G F     GS +Y +PE ++  R     + D+WS GVIL
Sbjct: 150 --AKIADFGLSNM--MSD---GEFLRTSCGSPNYAAPE-VISGRLYAGPEVDIWSCGVIL 201

Query: 235 YILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQ 294
           Y LL G  PF  +      + I  G F      +  ++ S   L+  +L VDP +R + +
Sbjct: 202 YALLCGTLPFDDEHVPTLFKKIRGGVFYI--PEY--LNRSVATLLMHMLQVDPLKRATIK 257

Query: 295 ELLNHPWV 302
           ++  H W 
Sbjct: 258 DIREHEWF 265

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score =  210 bits (536), Expect = 7e-64
 Identities = 81/359 (22%), Positives = 146/359 (40%), Gaps = 66/359 (18%)

Query: 1   MGQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSR 60
           +     + + +Y     LG G F  V   + K   +  +V +K +++             
Sbjct: 15  LAACEGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNK--EVVVKFIKK------------- 59

Query: 61  GSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLI 120
                 ++      +   +    +T EI ++ ++      H N+I + D++E+Q    L+
Sbjct: 60  -----EKVLEDCWIEDPKL--GKVTLEIAILSRVE-----HANIIKVLDIFENQGFFQLV 107

Query: 121 LEL-CSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDR 179
           +E   SG +LF  I    R  E  A+ + RQ+   +  L   +I+HRD+K EN +     
Sbjct: 108 MEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVI--A- 164

Query: 180 EDSPLKIMDFGLSSVEGYTDPVVGLF----GSIDYVSPEALLQDR--ITSKSDMWSLGVI 233
           ED  +K++DFG ++          LF    G+I+Y +PE +L        + +MWSLGV 
Sbjct: 165 EDFTIKLIDFGSAAY--LERG--KLFYTFCGTIEYCAPE-VLMGNPYRGPELEMWSLGVT 219

Query: 234 LYILLSGYPPFIAQSNRQKQQMIMAGEFS--FYEQTWKNISSSAKQLISSLLTVDPNRRP 291
           LY L+    PF      ++    +       +       +S     L+S LL   P RR 
Sbjct: 220 LYTLVFEENPF---CELEE---TVEAAIHPPYL------VSKELMSLVSGLLQPVPERRT 267

Query: 292 SAQELLNHPWV----------IGDSAKEEEMDAEIVSRLQSFNARRKLRAAAIASVLSS 340
           + ++L+  PWV            +  +  + ++ ++S        R L   A A  L  
Sbjct: 268 TLEKLVTDPWVTQPVNLADYTWEEVFRVNKPESGVLSAASLEMGNRSLSDVAQAQELCG 326

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score =  208 bits (532), Expect = 3e-63
 Identities = 84/301 (27%), Positives = 134/301 (44%), Gaps = 46/301 (15%)

Query: 7   KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSS 66
              +++++   LG G +  V+  + +   E   VA+K +              R      
Sbjct: 4   PFVEDWDLVQTLGEGAYGEVQLAVNRVTEE--AVAVKIVDM-----------KRAVDCPE 50

Query: 67  QIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSG 126
            I     +            EI + + +      H NV+  Y    + N  +L LE CSG
Sbjct: 51  NI----KK------------EICINKMLN-----HENVVKFYGHRREGNIQYLFLEYCSG 89

Query: 127 GELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKI 186
           GELFDRI       E  A     Q+  G+  LH   I HRD+KPEN L L++R++  LKI
Sbjct: 90  GELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPEN-LLLDERDN--LKI 146

Query: 187 MDFGLSSVEGYTDPVVGLF---GSIDYVSPEALLQDR--ITSKSDMWSLGVILYILLSGY 241
            DFGL++V  Y +    L    G++ YV+PE LL+ R       D+WS G++L  +L+G 
Sbjct: 147 SDFGLATVFRYNNRERLLNKMCGTLPYVAPE-LLKRREFHAEPVDVWSCGIVLTAMLAGE 205

Query: 242 PPFIAQSNRQKQ-QMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHP 300
            P+   S+  ++       +   Y   WK I S+   L+  +L  +P+ R +  ++    
Sbjct: 206 LPWDQPSDSCQEYSDWKEKK--TYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDR 263

Query: 301 W 301
           W
Sbjct: 264 W 264

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score =  207 bits (528), Expect = 2e-62
 Identities = 92/376 (24%), Positives = 147/376 (39%), Gaps = 53/376 (14%)

Query: 1   MGQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSR 60
           +       +D Y+    +G G F V R    K   E   VA+K +              R
Sbjct: 11  LDMPIMHDSDRYDFVKDIGSGNFGVARLMRDKLTKE--LVAVKYI-------------ER 55

Query: 61  GSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLI 120
           G++    +     R            EI+  R +      HPN++   +V      + +I
Sbjct: 56  GAAIDENV----QR------------EIINHRSLR-----HPNIVRFKEVILTPTHLAII 94

Query: 121 LELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRE 180
           +E  SGGEL++RI    R+ E  A    +Q+  G++  H   I HRDLK EN   L+   
Sbjct: 95  MEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLEN-TLLDGSP 153

Query: 181 DSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRI--TSKSDMWSLGVILYILL 238
              LKI DFG S             G+  Y++PE +L  +      +D+WS GV LY++L
Sbjct: 154 APRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPE-VLLRQEYDGKIADVWSCGVTLYVML 212

Query: 239 SGYPPF----IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQ 294
            G  PF      +  R+  Q I++ ++S  +     IS     LIS +   DP  R S  
Sbjct: 213 VGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIR--ISPECCHLISRIFVADPATRISIP 270

Query: 295 ELLNHPWV-------IGDSAKEEEMDAEIVSRLQSFNARRKLRAAAIASVLSSTIFLRRT 347
           E+  H W        + + +       E    +QS +   ++ + A    + +       
Sbjct: 271 EIKTHSWFLKNLPADLMNESNTGSQFQEPEQPMQSLDTIMQIISEATIPAVRNRCLDDFM 330

Query: 348 KKLKNLLGSHDLNEEE 363
               +L    D  + E
Sbjct: 331 TDNLDLDDDMDDFDSE 346

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score =  204 bits (520), Expect = 3e-61
 Identities = 53/335 (15%), Positives = 94/335 (28%), Gaps = 35/335 (10%)

Query: 4   ETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSS 63
              +   + ++ + L  G  SVV         E    A+K        +         ++
Sbjct: 56  LLSQGERKLKLVEPLRVGDRSVVFLVRDVERLE--DFALKVFTMGAENSRSELERLHEAT 113

Query: 64  SSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLIL-- 121
            ++      + ++            L++      V   P    L    +D    + +L  
Sbjct: 114 FAAARLLGESPEEA------RDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLM 167

Query: 122 -----ELCSGGELFDRIVAQERYMEVGAAAVI-RQIAEGLAALHQANIVHRDLKPENCLF 175
                +L       D +        + A  ++  Q+    A L    +VH    P+N   
Sbjct: 168 PAASVDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFI 227

Query: 176 LNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRI--TSKSDMWSLGVI 233
                D  L + D       G   P       + Y   E L       T   + W LG+ 
Sbjct: 228 ---MPDGRLMLGDVSALWKVGTRGPASS--VPVTYAPREFLNASTATFTHALNAWQLGLS 282

Query: 234 LYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTW-----KNISSSAKQLISSLLTVDPN 288
           +Y +   + PF   +   K              +        +    K LI   L  D  
Sbjct: 283 IYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRR 342

Query: 289 RRPSAQELLNHPWVIGDSAKEEEMDAEIVSRLQSF 323
           RR    E +  P          ++  EI S L + 
Sbjct: 343 RRLLPLEAMETPEF-------LQLQNEISSSLSTG 370

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score =  200 bits (511), Expect = 9e-61
 Identities = 77/305 (25%), Positives = 137/305 (44%), Gaps = 51/305 (16%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
           ++YEV   +G G +   ++  +K+ G+   +  K L     T                  
Sbjct: 6   EDYEVLYTIGTGSYGRCQKIRRKSDGK--ILVWKELDYGSMTEA---------------- 47

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNG--VHLILELCSGG 127
               ++        L +E+ ++R++      HPN++  YD   D+    +++++E C GG
Sbjct: 48  ---EKQM-------LVSEVNLLRELK-----HPNIVRYYDRIIDRTNTTLYIVMEYCEGG 92

Query: 128 ELFDRIVAQERYM----EVGAAAVIRQIAEGLAALHQAN-----IVHRDLKPENCLFLND 178
           +L   I    +      E     V+ Q+   L   H+ +     ++HRDLKP N +FL+ 
Sbjct: 93  DLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPAN-VFLD- 150

Query: 179 REDSPLKIMDFGLSSVEGYTDPVVGLF-GSIDYVSPEALLQDRITSKSDMWSLGVILYIL 237
                +K+ DFGL+ +  +       F G+  Y+SPE + +     KSD+WSLG +LY L
Sbjct: 151 -GKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209

Query: 238 LSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELL 297
            +  PPF A S ++    I  G+F          S    ++I+ +L +    RPS +E+L
Sbjct: 210 CALMPPFTAFSQKELAGKIREGKFRRI---PYRYSDELNEIITRMLNLKDYHRPSVEEIL 266

Query: 298 NHPWV 302
            +P +
Sbjct: 267 ENPLI 271

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score =  201 bits (514), Expect = 1e-60
 Identities = 91/338 (26%), Positives = 147/338 (43%), Gaps = 63/338 (18%)

Query: 1   MGQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSR 60
           M    R +   Y + + LG G F  V+        +  +VA+K + R             
Sbjct: 1   MAISKRHI-GPYIIRETLGEGSFGKVKLATHYKTQQ--KVALKFISR------------- 44

Query: 61  GSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLI 120
                  +       +V         EI  ++ +      HP++I LYDV      + ++
Sbjct: 45  -----QLLKKSDMHMRVE-------REISYLKLLR-----HPHIIKLYDVITTPTDIVMV 87

Query: 121 LELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRE 180
           +E   GGELFD IV ++R  E       +QI   +   H+  IVHRDLKPEN L L+D  
Sbjct: 88  IEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPEN-LLLDDNL 145

Query: 181 DSPLKIMDFGLSSVEGYTDPVVGLF-----GSIDYVSPEALLQDR--ITSKSDMWSLGVI 233
           +  +KI DFGLS++   TD   G F     GS +Y +PE ++  +     + D+WS G++
Sbjct: 146 N--VKIADFGLSNI--MTD---GNFLKTSCGSPNYAAPE-VINGKLYAGPEVDVWSCGIV 197

Query: 234 LYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSA 293
           LY++L G  PF  +      + + +  +         +S  A+ LI  ++  DP +R + 
Sbjct: 198 LYVMLVGRLPFDDEFIPNLFKKVNSCVYVMP----DFLSPGAQSLIRRMIVADPMQRITI 253

Query: 294 QELLNHPWVIGD---------SAKEEEMDAEIVSRLQS 322
           QE+   PW   +           +    D+ IVS+L  
Sbjct: 254 QEIRRDPWFNVNLPDYLRPMEEVQGSYADSRIVSKLGE 291

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score =  201 bits (512), Expect = 2e-60
 Identities = 70/295 (23%), Positives = 108/295 (36%), Gaps = 45/295 (15%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
             ++    LG G +  V +   K  G     A+K                          
Sbjct: 57  QSFQRLSRLGHGSYGEVFKVRSKEDGR--LYAVKRSMS---------------------- 92

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
             P R     +  L   E+       E V  HP  + L   +E+   ++L  ELC G  L
Sbjct: 93  --PFRGPKDRARKL--AEV----GSHEKVGQHPCCVRLEQAWEEGGILYLQTELC-GPSL 143

Query: 130 FDRIVAQERYM-EVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMD 188
                A    + E      +R     LA LH   +VH D+KP N +FL        K+ D
Sbjct: 144 QQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPAN-IFLG--PRGRCKLGD 200

Query: 189 FGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQS 248
           FGL    G         G   Y++PE LLQ    + +D++SLG+ +  +           
Sbjct: 201 FGLLVELGTAGAGEVQEGDPRYMAPE-LLQGSYGTAADVFSLGLTILEVACNMELPHGGE 259

Query: 249 NRQK-QQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
             Q+ +Q  +  EF         +SS  + ++  +L  DP  R +A+ LL  P +
Sbjct: 260 GWQQLRQGYLPPEF------TAGLSSELRSVLVMMLEPDPKLRATAEALLALPVL 308

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score =  202 bits (516), Expect = 2e-60
 Identities = 42/320 (13%), Positives = 87/320 (27%), Gaps = 44/320 (13%)

Query: 1   MGQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSR 60
           +G+  R          +LG+           +  GE     +                 +
Sbjct: 68  LGERPRT----LVRGTVLGQEDPYAYLEATDQETGE--SFEVHVPYFTERPPSNAIKQMK 121

Query: 61  GSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQN--GVH 118
                 ++     R   +   A +    +    +V++      +I +     D       
Sbjct: 122 EEVLRLRL----LRGIKNQKQAKVHLRFIFPFDLVKDPQ-KKKMIRVRLDERDMWVLSRF 176

Query: 119 LILELCS------GGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPEN 172
            +           G  L       +  +      +  Q+   LA+LH   +VH  L+P +
Sbjct: 177 FLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVD 236

Query: 173 CLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALL-----------QDRI 221
            +     +   + +  F     +G          S  +  PE              +  +
Sbjct: 237 IVL---DQRGGVFLTGFEHLVRDGARVVSS---VSRGFEPPELEARRATISYHRDRRTLM 290

Query: 222 TSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISS 281
           T   D W+LG+++Y +     P    +     + I            KNI    + L+  
Sbjct: 291 TFSFDAWALGLVIYWIWCADLPITKDAALGGSEWIFRS--------CKNIPQPVRALLEG 342

Query: 282 LLTVDPNRRPSAQELLNHPW 301
            L      R    + +  P 
Sbjct: 343 FLRYPKEDRLLPLQAMETPE 362

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score =  205 bits (522), Expect = 3e-60
 Identities = 94/337 (27%), Positives = 144/337 (42%), Gaps = 62/337 (18%)

Query: 3   QETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGS 62
            + R     Y + D LG G F  V+ G  +  G   +VA+K L R               
Sbjct: 9   HDGRVKIGHYILGDTLGVGTFGKVKVGKHELTGH--KVAVKILNR--------------- 51

Query: 63  SSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILE 122
               +I       ++         EI  ++        HP++I LY V    + + +++E
Sbjct: 52  ---QKIRSLDVVGKIR-------REIQNLKLFR-----HPHIIKLYQVISTPSDIFMVME 96

Query: 123 LCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDS 182
             SGGELFD I    R  E  +  + +QI  G+   H+  +VHRDLKPEN + L+   + 
Sbjct: 97  YVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPEN-VLLDAHMN- 154

Query: 183 PLKIMDFGLSSVEGYTDPVVGLF-----GSIDYVSPEALLQDR--ITSKSDMWSLGVILY 235
             KI DFGLS++   +D   G F     GS +Y +PE ++  R     + D+WS GVILY
Sbjct: 155 -AKIADFGLSNM--MSD---GEFLRTSCGSPNYAAPE-VISGRLYAGPEVDIWSSGVILY 207

Query: 236 ILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQE 295
            LL G  PF         + I  G F      +  ++ S   L+  +L VDP +R + ++
Sbjct: 208 ALLCGTLPFDDDHVPTLFKKICDGIFYT--PQY--LNPSVISLLKHMLQVDPMKRATIKD 263

Query: 296 LLNHPWVIGD----------SAKEEEMDAEIVSRLQS 322
           +  H W   D          S     +D E +  +  
Sbjct: 264 IREHEWFKQDLPKYLFPEDPSYSSTMIDDEALKEVCE 300

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score =  199 bits (509), Expect = 9e-60
 Identities = 80/348 (22%), Positives = 142/348 (40%), Gaps = 45/348 (12%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
           ++Y     +G G F           G   Q  IK +                      I 
Sbjct: 24  EKYVRLQKIGEGSFGKAILVKSTEDGR--QYVIKEIN---------------------IS 60

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
              ++++          E+ V+  +      HPN++   + +E+   ++++++ C GG+L
Sbjct: 61  RMSSKEREE-----SRREVAVLANMK-----HPNIVQYRESFEENGSLYIVMDYCEGGDL 110

Query: 130 FDRIVAQERYM--EVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIM 187
           F RI AQ+  +  E        QI   L  +H   I+HRD+K +N +FL   +D  +++ 
Sbjct: 111 FKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQN-IFLT--KDGTVQLG 167

Query: 188 DFGLSSVEGYTDPVVGLF-GSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIA 246
           DFG++ V   T  +     G+  Y+SPE        +KSD+W+LG +LY L +    F A
Sbjct: 168 DFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEA 227

Query: 247 QSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV---I 303
            S +     I++G    +     + S   + L+S L   +P  RPS   +L   ++   I
Sbjct: 228 GSMKNLVLKIISGS---FPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKRI 284

Query: 304 GDSAKEEEMDAEIVSRLQSFNARRKLRAAAIASVLSSTIFLRRTKKLK 351
                 + +  E   +  S    + + A   AS  +S   +   K  K
Sbjct: 285 EKFLSPQLIAEEFCLKTFSKFGSQPIPAKRPASGQNSISVMPAQKITK 332

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score =  197 bits (502), Expect = 5e-59
 Identities = 72/315 (22%), Positives = 111/315 (35%), Gaps = 64/315 (20%)

Query: 12  YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFF 71
           Y     LG GGFS V        G     A+K   RI                       
Sbjct: 31  YLFIQKLGEGGFSYVDLVEGLHDGH--FYALK---RI----------------------- 62

Query: 72  PTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNG----VHLILELCSGG 127
                          E  + R        HPN++ L      + G      L+L     G
Sbjct: 63  --LCHEQQDREEAQREADMHRLF-----NHPNILRLVAYCLRERGAKHEAWLLLPFFKRG 115

Query: 128 ELFDRI----VAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSP 183
            L++ I           E     ++  I  GL A+H     HRDLKP N + L D  +  
Sbjct: 116 TLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTN-ILLGD--EGQ 172

Query: 184 LKIMDFGLSSVEGYTDP----------VVGLFGSIDYVSPEALLQDR----ITSKSDMWS 229
             +MD G  +                       +I Y +PE L   +    I  ++D+WS
Sbjct: 173 PVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPE-LFSVQSHCVIDERTDVWS 231

Query: 230 LGVILYILLSGYPPFIAQSNR-QKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPN 288
           LG +LY ++ G  P+     +     + +  + S  +      SS+  QL++S++TVDP+
Sbjct: 232 LGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQ--SPRHSSALWQLLNSMMTVDPH 289

Query: 289 RRPSAQELLNHPWVI 303
           +RP    LL+    +
Sbjct: 290 QRPHIPLLLSQLEAL 304

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score =  192 bits (489), Expect = 3e-57
 Identities = 71/309 (22%), Positives = 126/309 (40%), Gaps = 50/309 (16%)

Query: 7   KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSS 66
           KL  +Y + D+LG G +  V+  +        + A+K L++                   
Sbjct: 2   KLIGKYLMGDLLGEGSYGKVKEVLDSETLC--RRAVKILKK------------------K 41

Query: 67  QIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVH--LILELC 124
           ++      +++   +A +  EI ++R++      H NVI L DV  ++      +++E C
Sbjct: 42  KL------RRIPNGEANVKKEIQLLRRLR-----HKNVIQLVDVLYNEEKQKMYMVMEYC 90

Query: 125 SGG--ELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDS 182
             G  E+ D +  ++R+    A     Q+ +GL  LH   IVH+D+KP N L        
Sbjct: 91  VCGMQEMLDSVP-EKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLL--T-TGG 146

Query: 183 PLKIMDFGLSSVEGYTDPVVGLF---GSIDYVSPEALLQDRIT---SKSDMWSLGVILYI 236
            LKI   G++                GS  +  PE +     T    K D+WS GV LY 
Sbjct: 147 TLKISALGVAEALHPFAADDTCRTSQGSPAFQPPE-IANGLDTFSGFKVDIWSAGVTLYN 205

Query: 237 LLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
           + +G  PF   +  +  + I  G ++       +       L+  +L  +P +R S +++
Sbjct: 206 ITTGLYPFEGDNIYKLFENIGKGSYAIPG----DCGPPLSDLLKGMLEYEPAKRFSIRQI 261

Query: 297 LNHPWVIGD 305
             H W    
Sbjct: 262 RQHSWFRKK 270

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score =  190 bits (485), Expect = 5e-57
 Identities = 66/324 (20%), Positives = 120/324 (37%), Gaps = 68/324 (20%)

Query: 6   RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSS 65
           ++   +++  +++G GGF  V +   +  G+     IK                      
Sbjct: 7   KRFGMDFKEIELIGSGGFGQVFKAKHRIDGK--TYVIK---------------------- 42

Query: 66  SQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNG--------- 116
                     +V  ++     E+  + K+      H N++     ++  +          
Sbjct: 43  ----------RVKYNNEKAEREVKALAKLD-----HVNIVHYNGCWDGFDYDPETSSKNS 87

Query: 117 -------VHLILELCSGGELFDRIVAQERYM--EVGAAAVIRQIAEGLAALHQANIVHRD 167
                  + + +E C  G L   I  +      +V A  +  QI +G+  +H   +++RD
Sbjct: 88  SRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRD 147

Query: 168 LKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDM 227
           LKP N +FL D +   +KI DFGL +            G++ Y+SPE +       + D+
Sbjct: 148 LKPSN-IFLVDTKQ--VKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDL 204

Query: 228 WSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDP 287
           ++LG+IL  LL         S       +  G  S             K L+  LL+  P
Sbjct: 205 YALGLILAELLHVCDTAFETSK--FFTDLRDGIIS------DIFDKKEKTLLQKLLSKKP 256

Query: 288 NRRPSAQELLNHPWVIGDSAKEEE 311
             RP+  E+L    V   S ++ E
Sbjct: 257 EDRPNTSEILRTLTVWKKSPEKNE 280

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score =  187 bits (476), Expect = 3e-55
 Identities = 67/301 (22%), Positives = 120/301 (39%), Gaps = 44/301 (14%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
             + +   +GRG FS V R      G    VA+K                       ++ 
Sbjct: 32  ANFRIEKKIGRGQFSEVYRAACLLDGV--PVALK-----------------------KVQ 66

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
            F      + +D +   EI +++++      HPNVI  Y  + + N ++++LEL   G+L
Sbjct: 67  IFDLMDAKARADCI--KEIDLLKQLN-----HPNVIKYYASFIEDNELNIVLELADAGDL 119

Query: 130 FDRIVAQERYM----EVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLK 185
              I   ++      E        Q+   L  +H   ++HRD+KP N +F+       +K
Sbjct: 120 SRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPAN-VFIT--ATGVVK 176

Query: 186 IMDFGLSSVEGYTDPVVGLF-GSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF 244
           + D GL               G+  Y+SPE + ++    KSD+WSLG +LY + +   PF
Sbjct: 177 LGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPF 236

Query: 245 IAQSNRQKQ--QMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
                      + I   ++        + S   +QL++  +  DP +RP    + +    
Sbjct: 237 YGDKMNLYSLCKKIEQCDYP--PLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKR 294

Query: 303 I 303
           +
Sbjct: 295 M 295

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score =  182 bits (465), Expect = 8e-54
 Identities = 69/322 (21%), Positives = 122/322 (37%), Gaps = 72/322 (22%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
            ++E    LGRGGF VV     K        AIK +R                       
Sbjct: 5   TDFEPIQCLGRGGFGVVFEAKNKVDDC--NYAIKRIRLPNREL----------------- 45

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNG------------V 117
               R++V         E+  + K+      HP ++  ++ + ++N             +
Sbjct: 46  ---AREKV-------MREVKALAKLE-----HPGIVRYFNAWLEKNTTEKLQPSSPKVYL 90

Query: 118 HLILELCSGGELFDRIVAQERYMEVGAAAVIR---QIAEGLAALHQANIVHRDLKPENCL 174
           ++ ++LC    L D +  +    E   +  +    QIAE +  LH   ++HRDLKP N +
Sbjct: 91  YIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSN-I 149

Query: 175 FLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSID-------------YVSPEALLQDRI 221
           F     D  +K+ DFGL +     +    +   +              Y+SPE +  +  
Sbjct: 150 FFTM--DDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSY 207

Query: 222 TSKSDMWSLGVILYILLSGYPPFIAQSNRQKQ-QMIMAGEFSFYEQTWKNISSSAKQLIS 280
           + K D++SLG+IL+ LL    PF  Q  R +    +   +F      +         ++ 
Sbjct: 208 SHKVDIFSLGLILFELLY---PFSTQMERVRTLTDVRNLKFP---PLFTQKYPCEYVMVQ 261

Query: 281 SLLTVDPNRRPSAQELLNHPWV 302
            +L+  P  RP A  ++ +   
Sbjct: 262 DMLSPSPMERPEAINIIENAVF 283

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score =  178 bits (453), Expect = 3e-52
 Identities = 68/324 (20%), Positives = 119/324 (36%), Gaps = 65/324 (20%)

Query: 1   MGQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSR 60
           MG ++R  T E+   + +G G F  V + +K+  G     AIK  ++             
Sbjct: 3   MGMKSR-YTTEFHELEKIGSGEFGSVFKCVKRLDGCI--YAIKRSKK------------- 46

Query: 61  GSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLI 120
                      P    V   +AL   E+     +      H +V+  +  + + + + + 
Sbjct: 47  -----------PLAGSVDEQNAL--REVYAHAVL----GQHSHVVRYFSAWAEDDHMLIQ 89

Query: 121 LELCSGGELFDRIVAQERYM----EVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFL 176
            E C+GG L D I    R M    E     ++ Q+  GL  +H  ++VH D+KP N +F+
Sbjct: 90  NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSN-IFI 148

Query: 177 NDREDSPL-----------------KIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQD 219
           +                        KI D G  +         G      +++ E L ++
Sbjct: 149 SRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEG---DSRFLANEVLQEN 205

Query: 220 RI-TSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQL 278
                K+D+++L + +       P      N  +   I  G      Q     S    +L
Sbjct: 206 YTHLPKADIFALALTVVCAAGAEPLP---RNGDQWHEIRQGRLPRIPQVL---SQEFTEL 259

Query: 279 ISSLLTVDPNRRPSAQELLNHPWV 302
           +  ++  DP RRPSA  L+ H  +
Sbjct: 260 LKVMIHPDPERRPSAMALVKHSVL 283

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score =  180 bits (458), Expect = 4e-52
 Identities = 45/344 (13%), Positives = 99/344 (28%), Gaps = 71/344 (20%)

Query: 4   ETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETN---QVAIKTLRRIGSTTPYGFPGSR 60
           E +  +    V  +LG G F+ V    +    +     +  +K  +              
Sbjct: 59  EFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQK-------------- 104

Query: 61  GSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLI 120
                                 + T  +  ++  +         +  Y  +  QNG  L+
Sbjct: 105 --------------PANPWEFYIGTQLMERLKPSM-----QHMFMKFYSAHLFQNGSVLV 145

Query: 121 LELCSGGELFDRIV-----AQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLF 175
            EL S G L + I       ++   +    +   ++   +  +H   I+H D+KP+N + 
Sbjct: 146 GELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFIL 205

Query: 176 LNDREDSP--------LKIMDFGLS---SVEGYTDPVVGLFGSIDYVSPEALLQDRITSK 224
            N   +          L ++D G S    +            +  +   E L       +
Sbjct: 206 GNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQ 265

Query: 225 SDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQT--WKNISSSAKQLISSL 282
            D + +   +Y +L G    +        +    G F        W             +
Sbjct: 266 IDYFGVAATVYCMLFGTYMKVKNEG---GECKPEGLFRRLPHLDMWNEF-------FHVM 315

Query: 283 LTVDPNRRPSAQELLNHPWVIGDSAKEEEMDAEIVSRLQSFNAR 326
           L +       + +LL           ++       +++++   R
Sbjct: 316 LNIPDCHHLPSLDLLRQKL-------KKVFQQHYTNKIRALRNR 352

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score =  181 bits (460), Expect = 5e-52
 Identities = 39/305 (12%), Positives = 82/305 (26%), Gaps = 33/305 (10%)

Query: 12  YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFF 71
                +LG+           +  GE     +                 +      ++   
Sbjct: 80  LVRGTVLGQEDPYAYLEATDQETGE--SFEVHVPYFTERPPSNAIKQMKEEVLRLRL--- 134

Query: 72  PTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCS------ 125
             R   +   A +    +    +V+       +I +     D   +              
Sbjct: 135 -LRGIKNQKQAKVHLRFIFPFDLVK-DPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQ 192

Query: 126 --GGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSP 183
             G  L       +  +      +  Q+   LA+LH   +VH  L+P + +     +   
Sbjct: 193 TFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVL---DQRGG 249

Query: 184 LKIMDFGLSSVEGYTDPVVG--LFGSIDYVSPEALLQDR-----ITSKSDMWSLGVILYI 236
           + +  F     +G +        F   +  +   L   +     +T   D W+LG+ +Y 
Sbjct: 250 VFLTGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYW 309

Query: 237 LLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
           +     P    +     + I            KNI    + L+   L      R    + 
Sbjct: 310 IWCADLPNTDDAALGGSEWIFRS--------CKNIPQPVRALLEGFLRYPKEDRLLPLQA 361

Query: 297 LNHPW 301
           +  P 
Sbjct: 362 METPE 366

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score =  168 bits (427), Expect = 5e-48
 Identities = 65/320 (20%), Positives = 114/320 (35%), Gaps = 71/320 (22%)

Query: 12  YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFF 71
             V  +L  GGF+ V        G   + A+K   R+                       
Sbjct: 30  LRVRRVLAEGGFAFVYEAQDVGSGR--EYALK---RL----------------------- 61

Query: 72  PTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYD-------VYEDQNGVHLILELC 124
                    +  +  E+  M+K    +S HPN++             +      L+L   
Sbjct: 62  --LSNEEEKNRAIIQEVCFMKK----LSGHPNIVQFCSAASIGKEESDTGQAEFLLLTEL 115

Query: 125 SGGELFDRIV---AQERYMEVGAAAVIRQIAEGLAALHQAN--IVHRDLKPENCLFLNDR 179
             G+L + +    ++          +  Q    +  +H+    I+HRDLK EN L L++ 
Sbjct: 116 CKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVEN-LLLSN- 173

Query: 180 EDSPLKIMDFGLSSVEGYTDPVVGL-------------FGSIDYVSPE--ALLQDR-ITS 223
               +K+ DFG ++   +                      +  Y +PE   L  +  I  
Sbjct: 174 -QGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGE 232

Query: 224 KSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLL 283
           K D+W+LG ILY+L     PF   +  +    I+ G++S          +    LI ++L
Sbjct: 233 KQDIWALGCILYLLCFRQHPFEDGAKLR----IVNGKYSI--PPHDTQYTVFHSLIRAML 286

Query: 284 TVDPNRRPSAQELLNHPWVI 303
            V+P  R S  E+++    I
Sbjct: 287 QVNPEERLSIAEVVHQLQEI 306

>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens} Length = 211

 Score =  164 bits (416), Expect = 8e-48
 Identities = 41/161 (25%), Positives = 77/161 (47%), Gaps = 2/161 (1%)

Query: 359 LNEEEIQNLRIHFRTICANGDNATLSEFEEVLKAMNMSSLV-PLAPRIFDLFDNNRDGTV 417
           +  +E       F     +G   TL EF+ +L    ++        ++++ FD N+DG V
Sbjct: 16  VPTQETHVWYRTFMMEYPSG-LQTLHEFKTLLGLQGLNQKANKHIDQVYNTFDTNKDGFV 74

Query: 418 DMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEP 477
           D  E +   + + + + +  L+  F++YD D +G I K E+  M  A+        ++  
Sbjct: 75  DFLEFIAAVNLIMQEKMEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPE 134

Query: 478 GKLDEIFDLMDANNDGKVTFDEFRAAMQRDSSLQDVVLSSL 518
             ++ +F  +D NNDG++T +EF   M +D  L ++V  S 
Sbjct: 135 EFINLVFHKIDINNDGELTLEEFINGMAKDQDLLEIVYKSF 175

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score =  165 bits (421), Expect = 2e-47
 Identities = 86/313 (27%), Positives = 127/313 (40%), Gaps = 57/313 (18%)

Query: 3   QETRKLT-DEYEVTDILGRGGFSVVRRGIKKTCGETNQV-AIKTLRRIGSTTPYGFPGSR 60
            + RK   ++++   ILG G FS V    +     T++  AIK L +             
Sbjct: 22  PQPRKKRPEDFKFGKILGEGSFSTVVLAREL---ATSREYAIKILEK------------- 65

Query: 61  GSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLI 120
                  I       +V          +   R ++  +  HP  + LY  ++D   ++  
Sbjct: 66  -----RHI---IKENKVP--------YVTRERDVMSRLD-HPFFVKLYFTFQDDEKLYFG 108

Query: 121 LELCSGGELFDRIVAQERYMEVGA---AAVIRQIAEGLAALHQANIVHRDLKPENCLFLN 177
           L     GEL   I     + E       A   +I   L  LH   I+HRDLKPEN L LN
Sbjct: 109 LSYAKNGELLKYIRKIGSFDETCTRFYTA---EIVSALEYLHGKGIIHRDLKPENIL-LN 164

Query: 178 DREDSPLKIMDFGLS---SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVIL 234
             ED  ++I DFG +   S E          G+  YVSPE L +      SD+W+LG I+
Sbjct: 165 --EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCII 222

Query: 235 YILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRP--- 291
           Y L++G PPF A +     Q I+  E+ F     +     A+ L+  LL +D  +R    
Sbjct: 223 YQLVAGLPPFRAGNEYLIFQKIIKLEYDF----PEKFFPKARDLVEKLLVLDATKRLGCE 278

Query: 292 ---SAQELLNHPW 301
                  L  HP+
Sbjct: 279 EMEGYGPLKAHPF 291

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score =  165 bits (420), Expect = 4e-47
 Identities = 62/334 (18%), Positives = 113/334 (33%), Gaps = 53/334 (15%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRR---------------------- 47
            ++E    +GRGGF VV     K        AIK +R                       
Sbjct: 6   TDFEPIQCMGRGGFGVVFEAKNKVDDC--NYAIKRIRLPNRELAREKVMREVKALAKLEH 63

Query: 48  ---IGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNV 104
              +     +               +           +    +   ++    +     N 
Sbjct: 64  PGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNT 123

Query: 105 IDLYDVYEDQNGVHLILELCSGGELFDRIVAQ---ERYMEVGAAAVIRQIAEGLAALHQA 161
           +        +  +++ ++LC    L D +  +   E         +  QIAE +  LH  
Sbjct: 124 VGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSK 183

Query: 162 NIVHRDLKPENCLFLNDREDSPLKIMDFGLS-------------SVEGYTDPVVGLFGSI 208
            ++HRDLKP N +F    +   +K+ DFGL              +         G  G+ 
Sbjct: 184 GLMHRDLKPSN-IFFTMDDV--VKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTK 240

Query: 209 DYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQ-QMIMAGEFSFYEQT 267
            Y+SPE +  +  + K D++SLG+IL+ LL     F  Q  R +    +   +F      
Sbjct: 241 LYMSPEQIHGNNYSHKVDIFSLGLILFELLY---SFSTQMERVRIITDVRNLKFP---LL 294

Query: 268 WKNISSSAKQLISSLLTVDPNRRPSAQELLNHPW 301
           +         ++  +L+  P  RP A +++ +  
Sbjct: 295 FTQKYPQEHMMVQDMLSPSPTERPEATDIIENAI 328

>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus} Length = 198

 Score =  155 bits (394), Expect = 8e-45
 Identities = 48/169 (28%), Positives = 87/169 (51%), Gaps = 3/169 (1%)

Query: 352 NLLGSHDLNEEEIQNLRIHFRTICANGDNATLSEFEEVLKAMNMSSLV-PLAPRIFDLFD 410
           +     +L+  E       F T C +G   TL EF++     N+S        ++F+ FD
Sbjct: 4   DSKAVEELSATECHQWYKKFMTECPSG-QLTLYEFKQFFGLKNLSPSANKYVEQMFETFD 62

Query: 411 NNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCL 470
            N+DG +D  E +   S + K + D  LR  F++YD+D +GCI + E+ ++++A+     
Sbjct: 63  FNKDGYIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINR 122

Query: 471 PVDITEPGKL-DEIFDLMDANNDGKVTFDEFRAAMQRDSSLQDVVLSSL 518
             +     +  + +FD +D N DG+++ +EF   +Q+D  L D++  SL
Sbjct: 123 CNEAMTAEEFTNMVFDKIDINGDGELSLEEFMEGVQKDEVLLDILTRSL 171

>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus} Length = 256

 Score =  157 bits (397), Expect = 1e-44
 Identities = 52/233 (22%), Positives = 96/233 (41%), Gaps = 24/233 (10%)

Query: 301 WVIGDSAKEEEMDAEIVS-RLQSFNARRKLRAAAIASVLSS---------------TIFL 344
            ++GD  +      E +  +   F  +  +R   I  +LSS               +   
Sbjct: 14  NLLGDPGRIPLSKRESIKWQRPRFTRQALMRCCLIKWILSSAAPQGSDSSDSELELSTVR 73

Query: 345 RRTKKLKNLLGSHDLNEEEIQNLRIHFRTICANGDNATLSEFEEVLKAMN-MSSLVPLAP 403
            + + L  L       ++E+Q+L   F+  C  G       F+ +             A 
Sbjct: 74  HQPEGLDQLQAQTKFTKKELQSLYRGFKNECPTG-LVDEDTFKLIYSQFFPQGDATTYAH 132

Query: 404 RIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLR 463
            +F+ FD + +G +   + + G S L +    + L+  F +YDI++ GCITKEE+ ++++
Sbjct: 133 FLFNAFDADGNGAIHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGCITKEEMLAIMK 192

Query: 464 ALPDDCLPVDITEPGK------LDEIFDLMDANNDGKVTFDEFRAAMQRDSSL 510
           ++ D           +      ++  F  MD N DG VT DEF    Q+D ++
Sbjct: 193 SIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEFLETCQKDENI 245

>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A Length = 207

 Score =  149 bits (377), Expect = 2e-42
 Identities = 51/211 (24%), Positives = 94/211 (44%), Gaps = 24/211 (11%)

Query: 317 VSRLQSFNARRKLRAAAIASVLSSTIFLRRTKKLKNLLGSHDLNEEEIQNLRIHFRTICA 376
           VS+ +  NA R         + S T F                  EE++ L   F+ + +
Sbjct: 5   VSKKKKKNAMRPPGYEDPELLASVTPF----------------TVEEVEALYELFKKLSS 48

Query: 377 NGDNATLSEFEEVLKAMNMSSLV--PLAPRIFDLFDNNRDGTVDMREILCGFSSLR-KSQ 433
           +  +  L   EE   A+  +       A RIFD+FD  R+G ++  E +         + 
Sbjct: 49  SIIDDGLIHKEEFQLALFRNRNRRNLFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAP 108

Query: 434 GDDALRLCFQMYDIDRSGCITKEEVASMLRAL---PDDCLPVDITEPGKLDEIFDLMDAN 490
             + ++  F++YD+ ++G I +EE+  M+ AL    +  L  D+ E   +D+ F   D  
Sbjct: 109 VHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEV-MVDKAFVQADRK 167

Query: 491 NDGKVTFDEFRAAMQRDSS-LQDVVLSSLRQ 520
           NDGK+  DE++  +  + S ++++ L  L+ 
Sbjct: 168 NDGKIDIDEWKDFVSLNPSLIKNMTLPYLKD 198

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score =  153 bits (388), Expect = 4e-42
 Identities = 77/309 (24%), Positives = 135/309 (43%), Gaps = 55/309 (17%)

Query: 3   QETRKLT-DEYEVTDILGRGGFSVVRRGIKKTCGETNQV-AIKTLRRIGSTTPYGFPGSR 60
                   D+++    LG G F  V     K   E+    A+K L +             
Sbjct: 33  PSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDK------------- 76

Query: 61  GSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLI 120
                 ++      KQ+           L  ++I++ V+  P ++ L   ++D + ++++
Sbjct: 77  -----QKV---VKLKQIE--------HTLNEKRILQAVN-FPFLVKLEFSFKDNSNLYMV 119

Query: 121 LELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRE 180
           +E  +GGE+F  +    R+ E  A     QI      LH  ++++RDLKPEN L   D+ 
Sbjct: 120 MEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI--DQ- 176

Query: 181 DSPLKIMDFGLSSVEG---YTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYIL 237
              +++ DFG +       +T     L G+ + ++PE +L        D W+LGV++Y +
Sbjct: 177 QGYIQVTDFGFAKRVKGRTWT-----LCGTPEALAPEIILSKGYNKAVDWWALGVLIYEM 231

Query: 238 LSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR-----PS 292
            +GYPPF A    Q  + I++G+  F      + SS  K L+ +LL VD  +R       
Sbjct: 232 AAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLKNG 287

Query: 293 AQELLNHPW 301
             ++ NH W
Sbjct: 288 VNDIKNHKW 296

>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5 Length = 224

 Score =  148 bits (376), Expect = 5e-42
 Identities = 50/203 (24%), Positives = 87/203 (42%), Gaps = 14/203 (6%)

Query: 320 LQSFNARRKLRA----AAIASVLSSTIFLRRTKKLKNLLGSHDLNEEEIQNLRIHFRTIC 375
           + +F++ +  +       I   L  T+   R + L+ L    +  + E+Q L   F+  C
Sbjct: 5   MGTFSSLQTKQRRPSKDKIEDELEMTMVCHRPEGLEQLEAQTNFTKRELQVLYRGFKNEC 64

Query: 376 ANGDNATLSEFEEVLKA-MNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQG 434
            +G       F+++             A  +F+ FD  + G+V   + +   S L +   
Sbjct: 65  PSG-VVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTV 123

Query: 435 DDALRLCFQMYDIDRSGCITKEEVASMLRAL-------PDDCLPVDITEPGKLDEIFDLM 487
            + LR  F +YDI++ G I KEE+  +++A+           L  D      +D  F  M
Sbjct: 124 HEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPR-QHVDVFFQKM 182

Query: 488 DANNDGKVTFDEFRAAMQRDSSL 510
           D N DG VT DEF  + Q D ++
Sbjct: 183 DKNKDGIVTLDEFLESCQEDDNI 205

>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A Length = 229

 Score =  148 bits (374), Expect = 1e-41
 Identities = 52/201 (25%), Positives = 87/201 (43%), Gaps = 8/201 (3%)

Query: 317 VSRLQSFNARRKLRAAAIASVLSSTIFLRRTKKLKNLLGSHDLNEEEIQNLRIHFRTICA 376
           V  L+ F         ++   L       R + L+ L       ++E+Q L   F+  C 
Sbjct: 19  VKLLEQFGLIEAGLEDSVEDELEMATVRHRPEALELLEAQSKFTKKELQILYRGFKNECP 78

Query: 377 NGDNATLSEFEEVLKA-MNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGD 435
           +G       F+E+             A  +F+ FD + +G V   + + G S L +    
Sbjct: 79  SG-VVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTVQ 137

Query: 436 DALRLCFQMYDIDRSGCITKEEVASMLRALPD---DCLPVDITEPG---KLDEIFDLMDA 489
           + L   F +YDI++ G ITKEE+  +++A+ D    C    + E      ++  F  MD 
Sbjct: 138 EKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDK 197

Query: 490 NNDGKVTFDEFRAAMQRDSSL 510
           N DG VT DEF  + Q+D ++
Sbjct: 198 NKDGVVTIDEFIESCQKDENI 218

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score =  151 bits (382), Expect = 2e-41
 Identities = 63/307 (20%), Positives = 108/307 (35%), Gaps = 53/307 (17%)

Query: 4   ETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSS 63
           E R+          +GRG F  V R   K  G     A+K                    
Sbjct: 52  EYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQ--CAVK-------------------- 89

Query: 64  SSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILEL 123
                       +V +    +  E++    +       P ++ LY    +   V++ +EL
Sbjct: 90  ------------KVRLEVFRV-EELVACAGL-----SSPRIVPLYGAVREGPWVNIFMEL 131

Query: 124 CSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSP 183
             GG L   I       E  A   + Q  EGL  LH   I+H D+K +N L     + S 
Sbjct: 132 LEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLL--SSDGSR 189

Query: 184 LKIMDFGLS------SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYIL 237
             + DFG +       +         + G+  +++PE ++     +K D+WS   ++  +
Sbjct: 190 AALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHM 249

Query: 238 LSGYPPFIAQSNRQKQQMIM--AGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQE 295
           L+G  P+   +   +  + +  A E     +   + +    Q I   L  +P  R SA E
Sbjct: 250 LNGCHPW---TQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAME 306

Query: 296 LLNHPWV 302
           L      
Sbjct: 307 LRRKVGK 313

>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5 Length = 193

 Score =  146 bits (369), Expect = 2e-41
 Identities = 53/172 (30%), Positives = 88/172 (51%), Gaps = 8/172 (4%)

Query: 346 RTKKLKNLLGSHDLNEEEIQNLRIHFRTICANGDNATLSEFEEVLKAMN-MSSLVPLAPR 404
           R + +++LL S D  E EIQ     F   C +G + ++ EF+++             A  
Sbjct: 9   RPEVMQDLLESTDFTEHEIQEWYKGFLRDCPSG-HLSMEEFKKIYGNFFPYGDASKFAEH 67

Query: 405 IFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRA 464
           +F  FD N DGT+D RE +   S   + + +  L+  F MYD+D +G I+K E+  +++A
Sbjct: 68  VFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQA 127

Query: 465 LPDDC-----LPVDITEPGKL-DEIFDLMDANNDGKVTFDEFRAAMQRDSSL 510
           +         +P D + P K  ++IF  MD N DGK++ +EF    + D S+
Sbjct: 128 IYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKSDPSI 179

>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5 Length = 204

 Score =  146 bits (369), Expect = 3e-41
 Identities = 39/173 (22%), Positives = 76/173 (43%), Gaps = 12/173 (6%)

Query: 359 LNEEEIQNLRIHFRTICANGDNATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVD 418
            +  ++Q     F   C +G    + EF+   K  +          +F  FD N D T+D
Sbjct: 19  ADAAQLQEWYKKFLEECPSG-TLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTID 77

Query: 419 MREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRAL-----------PD 467
             E +   + + +   +  L+  F++YD DR+GCI ++E+  ++ ++             
Sbjct: 78  FLEYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEA 137

Query: 468 DCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDSSLQDVVLSSLRQ 520
           +     +T    +D IF L+D N DG+++ +EF    +RD  +  ++   L  
Sbjct: 138 EQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGARRDKWVMKMLQMDLNP 190

>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe} Length = 190

 Score =  145 bits (367), Expect = 4e-41
 Identities = 49/172 (28%), Positives = 93/172 (54%), Gaps = 8/172 (4%)

Query: 346 RTKKLKNLLGSHDLNEEEIQNLRIHFRTICANGDNATLSEFEEVLKAMN-MSSLVPLAPR 404
              +L++L+ S   +++E+Q     F   C +G +   SEF+++ K           A  
Sbjct: 9   SQDQLQDLVRSTRFDKKELQQWYKGFFKDCPSG-HLNKSEFQKIYKQFFPFGDPSAFAEY 67

Query: 405 IFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRA 464
           +F++FD +++G +D +E +C  S   + + +D L   FQ+YD+D +G I+ +E+  ++ A
Sbjct: 68  VFNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDA 127

Query: 465 LPDDC-----LPVDITEPGKL-DEIFDLMDANNDGKVTFDEFRAAMQRDSSL 510
           +         LP D   P K  ++IF++MD N DG++T +EF    +RD ++
Sbjct: 128 IYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEGSKRDPTI 179

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score =  148 bits (377), Expect = 6e-41
 Identities = 77/304 (25%), Positives = 132/304 (43%), Gaps = 60/304 (19%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQV-AIKTLRRIGSTTPYGFPGSRGSSSSSQI 68
            ++++   LG G F  V     +      +  A+K L++                    +
Sbjct: 6   QDFQILRTLGTGSFGRVHLIRSR---HNGRYYAMKVLKK------------------EIV 44

Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
                 KQV              R ++  V+ HP +I ++  ++D   + +I++   GGE
Sbjct: 45  ---VRLKQVE--------HTNDERLMLSIVT-HPFIIRMWGTFQDAQQIFMIMDYIEGGE 92

Query: 129 LFDRIVAQERYMEVGA---AAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLK 185
           LF  +   +R+    A   AA   ++   L  LH  +I++RDLKPEN L   D+ +  +K
Sbjct: 93  LFSLLRKSQRFPNPVAKFYAA---EVCLALEYLHSKDIIYRDLKPENILL--DK-NGHIK 146

Query: 186 IMDFGLSSVEG---YTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYP 242
           I DFG +       YT     L G+ DY++PE +         D WS G+++Y +L+GY 
Sbjct: 147 ITDFGFAKYVPDVTYT-----LCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYT 201

Query: 243 PFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR-----PSAQELL 297
           PF   +  +  + I+  E  F        +   K L+S L+T D ++R        +++ 
Sbjct: 202 PFYDSNTMKTYEKILNAELRF----PPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVK 257

Query: 298 NHPW 301
           NHPW
Sbjct: 258 NHPW 261

>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A Length = 226

 Score =  144 bits (365), Expect = 2e-40
 Identities = 45/191 (23%), Positives = 76/191 (39%), Gaps = 9/191 (4%)

Query: 328 KLRAAAIASVLSSTIF--LRRTKKLKNLLGSHDLNEEEIQNLRIHFRTICANGDNA---T 382
           K    ++       ++         + L      +  EI+ L   F+ I +   +     
Sbjct: 9   KHLCTSVLGCFDLDLYKQSGGLGDPELLARDTVFSVSEIEALYELFKKISSAVIDDGLIN 68

Query: 383 LSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLR-KSQGDDALRLC 441
             EF+  L   N       A R+FDLFD   +G +   E     S     +  DD +   
Sbjct: 69  KEEFQLALFKTNKKE-SLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFS 127

Query: 442 FQMYDIDRSGCITKEEVASMLRAL--PDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDE 499
           FQ+YD+ + G I ++EV  M+ A          D      +D+ F+  D  +DGK+  +E
Sbjct: 128 FQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEE 187

Query: 500 FRAAMQRDSSL 510
           +R+ + R  SL
Sbjct: 188 WRSLVLRHPSL 198

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score =  146 bits (371), Expect = 6e-40
 Identities = 85/305 (27%), Positives = 144/305 (47%), Gaps = 44/305 (14%)

Query: 5   TRKLT-DEYEVTDILGRGGFSVVRRGIKKTCGETNQV-AIKTLRRIGSTTPYGFPGSRGS 62
             K+  + +E+  +LG+GG+  V +  K T   T ++ A+K L+                
Sbjct: 11  PEKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLK---------------- 54

Query: 63  SSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILE 122
                       K + V +A  T      R I+E V  HP ++DL   ++    ++LILE
Sbjct: 55  ------------KAMIVRNAKDTAHTKAERNILEEVK-HPFIVDLIYAFQTGGKLYLILE 101

Query: 123 LCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDS 182
             SGGELF ++  +  +ME  A   + +I+  L  LHQ  I++RDLKPEN +   +    
Sbjct: 102 YLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIML--NH-QG 158

Query: 183 PLKIMDFGLSSVEGYTDPVVGLF-GSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGY 241
            +K+ DFGL     +   V   F G+I+Y++PE L++       D WSLG ++Y +L+G 
Sbjct: 159 HVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGA 218

Query: 242 PPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR-----PSAQEL 296
           PPF  ++ ++    I+  + +        ++  A+ L+  LL  +   R       A E+
Sbjct: 219 PPFTGENRKKTIDKILKCKLNLP----PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEV 274

Query: 297 LNHPW 301
             HP+
Sbjct: 275 QAHPF 279

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score =  145 bits (367), Expect = 8e-40
 Identities = 75/323 (23%), Positives = 130/323 (40%), Gaps = 57/323 (17%)

Query: 3   QETRKLTDEYEVTD-----ILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFP 57
            E+  L  +YE  +     +LG+G + +V  G   +      +AIK              
Sbjct: 10  CESDLLEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVR--IAIK-------------- 53

Query: 58  GSRGSSSSSQIGFFPTRKQVSVSDA----LLTNEILVMRKIVENVSPHPNVIDLYDVYED 113
                             ++   D+     L  EI + + +      H N++     + +
Sbjct: 54  ------------------EIPERDSRYSQPLHEEIALHKHL-----KHKNIVQYLGSFSE 90

Query: 114 QNGVHLILELCSGGELFDRIVAQE---RYMEVGAAAVIRQIAEGLAALHQANIVHRDLKP 170
              + + +E   GG L   + ++    +  E       +QI EGL  LH   IVHRD+K 
Sbjct: 91  NGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKG 150

Query: 171 ENCLFLNDREDSPLKIMDFGLSS-VEGYTDPVVGLFGSIDYVSPEALLQDRI--TSKSDM 227
           +N L   +     LKI DFG S  + G         G++ Y++PE + +        +D+
Sbjct: 151 DNVLI--NTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADI 208

Query: 228 WSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDP 287
           WSLG  +  + +G PPF      Q   M   G F  + +  +++S+ AK  I      DP
Sbjct: 209 WSLGCTIIEMATGKPPFYELGEPQ-AAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDP 267

Query: 288 NRRPSAQELLNHPWVIGDSAKEE 310
           ++R  A +LL   ++   S K++
Sbjct: 268 DKRACANDLLVDEFLKVSSKKKK 290

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score =  146 bits (370), Expect = 1e-39
 Identities = 83/314 (26%), Positives = 142/314 (45%), Gaps = 50/314 (15%)

Query: 3   QETRKLT-DEYEVTDILGRGGFSVVRRGIKKTCGETNQV-AIKTLRRIGSTTPYGFPGSR 60
               K+  + +E+  +LG G +  V    K +  +T ++ A+K L+              
Sbjct: 46  GHAEKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLK-------------- 91

Query: 61  GSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLI 120
                         K   V  A  T      R+++E++   P ++ L+  ++ +  +HLI
Sbjct: 92  --------------KATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLI 137

Query: 121 LELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRE 180
           L+  +GGELF  +  +ER+ E      + +I   L  LH+  I++RD+K EN L   D  
Sbjct: 138 LDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILL--DS- 194

Query: 181 DSPLKIMDFGLS--SVEGYTDPVVGLFGSIDYVSPEALLQDRI-TSKS-DMWSLGVILYI 236
           +  + + DFGLS   V   T+      G+I+Y++P+ +        K+ D WSLGV++Y 
Sbjct: 195 NGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYE 254

Query: 237 LLSGYPPFIA----QSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR-- 290
           LL+G  PF       S  +  + I+  E  +     + +S+ AK LI  LL  DP +R  
Sbjct: 255 LLTGASPFTVDGEKNSQAEISRRILKSEPPYP----QEMSALAKDLIQRLLMKDPKKRLG 310

Query: 291 ---PSAQELLNHPW 301
                A E+  H +
Sbjct: 311 CGPRDADEIKEHLF 324

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score =  151 bits (382), Expect = 2e-39
 Identities = 75/306 (24%), Positives = 126/306 (41%), Gaps = 56/306 (18%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQV-AIKTLR--RIGSTTPYGFPGSRGSSSSS 66
           +++ V  I+GRGGF  V    K    +T ++ A+K L   RI                  
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKA---DTGKMYAMKCLDKKRIKM---------------- 229

Query: 67  QIGFFPTRKQVSVSDALLTNEILVMRKIVENVS--PHPNVIDLYDVYEDQNGVHLILELC 124
                  ++       L  NE    R ++  VS    P ++ +   +   + +  IL+L 
Sbjct: 230 -------KQGE----TLALNE----RIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLM 274

Query: 125 SGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPL 184
           +GG+L   +     + E        +I  GL  +H   +V+RDLKP N L L++     +
Sbjct: 275 NGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANIL-LDE--HGHV 331

Query: 185 KIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPP 243
           +I D GL + +          G+  Y++PE L +      S D +SLG +L+ LL G+ P
Sbjct: 332 RISDLGL-ACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390

Query: 244 FIAQSNRQKQQM---IMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR-----PSAQE 295
           F     + K ++    +       +    + S   + L+  LL  D NRR       AQE
Sbjct: 391 FRQHKTKDKHEIDRMTLTMAVELPD----SFSPELRSLLEGLLQRDVNRRLGCLGRGAQE 446

Query: 296 LLNHPW 301
           +   P+
Sbjct: 447 VKESPF 452

>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E Length = 183

 Score =  140 bits (354), Expect = 3e-39
 Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 10/173 (5%)

Query: 346 RTKKLKNLLGSHDLNEEEIQNLRIHFRTICANGDNATLSEFEEVLKA-MNMSSLVPLAPR 404
           R + L+ L    +  + E+Q L   F+    +G       F+++             A  
Sbjct: 2   RPEGLEQLEAQTNFTKRELQVLYRGFKNEXPSG-VVNEETFKQIYAQFFPHGDASTYAHY 60

Query: 405 IFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRA 464
           +F+ FD  + G+V   + +   S L +    + LR  F +YDI++ G I KEE+  +++A
Sbjct: 61  LFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKA 120

Query: 465 L-------PDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDSSL 510
           +           L  D      +D  F  MD N DG VT DEF  + Q D ++
Sbjct: 121 IYDMMGKYTYPVLKEDTPR-QHVDVFFQKMDKNKDGIVTLDEFLESXQEDDNI 172

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score =  144 bits (366), Expect = 3e-39
 Identities = 74/307 (24%), Positives = 136/307 (44%), Gaps = 46/307 (14%)

Query: 3   QETRKLT-DEYEVTDILGRGGFSVVRRGIKKTCGETNQV-AIKTLRRIGSTTPYGFPGSR 60
           +   K    ++E+  +LG+G F  V    K +  +  Q+ A+K L+              
Sbjct: 16  EGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLK-------------- 61

Query: 61  GSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLI 120
                         K              + R I+  V+ HP ++ L+  ++ +  ++LI
Sbjct: 62  --------------KATLKVRD--RVRTKMERDILVEVN-HPFIVKLHYAFQTEGKLYLI 104

Query: 121 LELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRE 180
           L+   GG+LF R+  +  + E      + ++A  L  LH   I++RDLKPEN L   D E
Sbjct: 105 LDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL--D-E 161

Query: 181 DSPLKIMDFGLSSVEGYTDPVVGLF-GSIDYVSPEALLQDRITSKSDMWSLGVILYILLS 239
           +  +K+ DFGLS      +     F G+++Y++PE + +   T  +D WS GV+++ +L+
Sbjct: 162 EGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLT 221

Query: 240 GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR-----PSAQ 294
           G  PF  +  ++   MI+  +        + +S  A+ L+  L   +P  R        +
Sbjct: 222 GTLPFQGKDRKETMTMILKAKLGMP----QFLSPEAQSLLRMLFKRNPANRLGAGPDGVE 277

Query: 295 ELLNHPW 301
           E+  H +
Sbjct: 278 EIKRHSF 284

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score =  145 bits (368), Expect = 5e-39
 Identities = 66/308 (21%), Positives = 129/308 (41%), Gaps = 49/308 (15%)

Query: 3   QETRKLT-DEYEVTDILGRGGFSVVRRGIKKTCGETNQV-AIKTLRRIGSTTPYGFPGSR 60
            E   +  D +E+   +G+G F  V    K    +T ++ A+K +               
Sbjct: 7   DENEDVNFDHFEILRAIGKGSFGKVCIVQKN---DTKKMYAMKYMN-------------- 49

Query: 61  GSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLI 120
                         KQ  V    + N +    +I++ +  HP +++L+  ++D+  + ++
Sbjct: 50  --------------KQKCVERNEVRN-VFKELQIMQGLE-HPFLVNLWYSFQDEEDMFMV 93

Query: 121 LELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRE 180
           ++L  GG+L   +     + E      I ++   L  L    I+HRD+KP+N L   D E
Sbjct: 94  VDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILL--D-E 150

Query: 181 DSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRIT--SKS-DMWSLGVILYIL 237
              + I DF ++++      +  + G+  Y++PE     +    S + D WSLGV  Y L
Sbjct: 151 HGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYEL 210

Query: 238 LSGYPPFIAQSNRQKQQM---IMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR-PSA 293
           L G  P+  +S+   +++         ++        S     L+  LL  +P++R    
Sbjct: 211 LRGRRPYHIRSSTSSKEIVHTFETTVVTYPS----AWSQEMVSLLKKLLEPNPDQRFSQL 266

Query: 294 QELLNHPW 301
            ++ N P+
Sbjct: 267 SDVQNFPY 274

>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A Length = 190

 Score =  139 bits (352), Expect = 6e-39
 Identities = 48/172 (27%), Positives = 82/172 (47%), Gaps = 8/172 (4%)

Query: 346 RTKKLKNLLGSHDLNEEEIQNLRIHFRTICANGDNATLSEFEEVLKAMN-MSSLVPLAPR 404
           + + ++ L       E+E+Q     F   C +G     + F+++ K           A  
Sbjct: 9   KPEVVEELTRKTYFTEKEVQQWYKGFIKDCPSG-QLDAAGFQKIYKQFFPFGDPTKFATF 67

Query: 405 IFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRA 464
           +F++FD N+DG ++  E +   S   +   D+ LR  F++YD+D  G IT+ E+  ++ A
Sbjct: 68  VFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDA 127

Query: 465 LPD-----DCLPVDITEPGKL-DEIFDLMDANNDGKVTFDEFRAAMQRDSSL 510
           +         LP +   P K  D IF +MD N DGK+T  EF+   + D S+
Sbjct: 128 IYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKADPSI 179

>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A Length = 207

 Score =  138 bits (350), Expect = 1e-38
 Identities = 43/174 (24%), Positives = 74/174 (42%), Gaps = 10/174 (5%)

Query: 346 RTKKLKNLLGSHDLNEEEIQNLRIHFRTICANGDNATLSEFEEVLKAMNMSSLV-PLAPR 404
             + L+ L  +   +EEE+ +    F   C  G   T  +F+ +       +     A  
Sbjct: 17  SKEILEELQLNTKFSEEELCSWYQSFLKDCPTGRI-TQQQFQSIYAKFFPDTDPKAYAQH 75

Query: 405 IFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRA 464
           +F  FD+N DGT+D +E +         + +  L   F +YD+D +G I+K EV  ++ A
Sbjct: 76  VFRSFDSNLDGTLDFKEYVIALHMTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVMA 135

Query: 465 LPD-------DCLPVDITEPGKL-DEIFDLMDANNDGKVTFDEFRAAMQRDSSL 510
           +           LP D   P K  ++I+     N+D K+T  EF      +  +
Sbjct: 136 IFKMITPEDVKLLPDDENTPEKRAEKIWKYFGKNDDDKLTEKEFIEGTLANKEI 189

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score =  142 bits (360), Expect = 2e-38
 Identities = 71/334 (21%), Positives = 123/334 (36%), Gaps = 91/334 (27%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
           ++YE    +G G + VV +   +  G+   VAIK      S                 + 
Sbjct: 3   EKYEKIGKIGEGSYGVVFKCRNRDTGQI--VAIKKFLE--SEDDPVIK-------KIAL- 50

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELC----- 124
               R            EI +++++      HPN+++L +V+  +  +HL+ E C     
Sbjct: 51  ----R------------EIRMLKQL-----KHPNLVNLLEVFRRKRRLHLVFEYCDHTVL 89

Query: 125 ----SGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRE 180
                        + +             Q  + +   H+ N +HRD+KPEN + +    
Sbjct: 90  HELDRYQRGVPEHLVK-SIT--------WQTLQAVNFCHKHNCIHRDVKPEN-ILITKHS 139

Query: 181 DSPLKIMDFGL-----SSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKS-DMWSLGVIL 234
              +K+ DFG         + Y D V   +    Y SPE L+ D       D+W++G + 
Sbjct: 140 V--IKLCDFGFARLLTGPSDYYDDEVATRW----YRSPELLVGDTQYGPPVDVWAIGCVF 193

Query: 235 YILLSGYPPFIAQSNRQKQQMIM-------------------AGEFSFY--------EQT 267
             LLSG P +  +S+  +  +I                                   E  
Sbjct: 194 AELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELK 253

Query: 268 WKNISSSAKQLISSLLTVDPNRRPSAQELLNHPW 301
           + NIS  A  L+   L +DP  R + ++LL+HP+
Sbjct: 254 FPNISYPALGLLKGCLHMDPTERLTCEQLLHHPY 287

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score =  143 bits (362), Expect = 7e-38
 Identities = 74/305 (24%), Positives = 128/305 (41%), Gaps = 50/305 (16%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQV-AIKTLRRIGSTTPYGFPGSRGSSSSSQI 68
           +++E+  ++GRG F  V     K     ++V A+K L                       
Sbjct: 74  EDFEILKVIGRGAFGEVAVVKLK---NADKVFAMKILN---------------------- 108

Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
                 K   +  A         R ++ N      +  L+  ++D N ++L+++   GG+
Sbjct: 109 ------KWEMLKRAETAC-FREERDVLVNGD-SKWITTLHYAFQDDNNLYLVMDYYVGGD 160

Query: 129 LFDRIVAQE-RYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIM 187
           L   +   E R  E  A   + ++   + ++HQ + VHRD+KP+N L   D  +  +++ 
Sbjct: 161 LLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILM--DM-NGHIRLA 217

Query: 188 DFGLSSVEGYTDPVVGLF---GSIDYVSPEALLQDRITSKS-----DMWSLGVILYILLS 239
           DFG    +   D  V      G+ DY+SPE L              D WSLGV +Y +L 
Sbjct: 218 DFGSCL-KLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLY 276

Query: 240 GYPPFIAQSNRQKQQMIMAGEFSF-YEQTWKNISSSAKQLISSLLTVDPNR--RPSAQEL 296
           G  PF A+S  +    IM  +  F +     ++S +AK LI  L+    +R  +   ++ 
Sbjct: 277 GETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDF 336

Query: 297 LNHPW 301
             HP+
Sbjct: 337 KKHPF 341

>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A Length = 190

 Score =  135 bits (341), Expect = 2e-37
 Identities = 43/172 (25%), Positives = 76/172 (44%), Gaps = 8/172 (4%)

Query: 346 RTKKLKNLLGSHDLNEEEIQNLRIHFRTICANGDNATLSEFEEVLKAMN-MSSLVPLAPR 404
               L  L  S   +  EIQ     F   C +G      +F ++ K      S    A  
Sbjct: 9   SKDDLTCLKQSTYFDRREIQQWHKGFLRDCPSGQL-AREDFVKIYKQFFPFGSPEDFANH 67

Query: 405 IFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRA 464
           +F +FD + +G +   E +   S+  +   ++ L   F++YD++  G IT +E+ +++ +
Sbjct: 68  LFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVAS 127

Query: 465 LPD------DCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDSSL 510
           +             + T   ++ +IF LMD N DG +T DEFR   + D S+
Sbjct: 128 VYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSKVDPSI 179

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score =  137 bits (347), Expect = 5e-37
 Identities = 74/315 (23%), Positives = 126/315 (40%), Gaps = 60/315 (19%)

Query: 3   QETRKLTDEYEV--TDI-----LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYG 55
             +R   D++E+    I     +G G F  V +G          VA+K L          
Sbjct: 10  HGSRDAADDWEIPDGQITVGQRIGSGSFGTVYKGKWH-----GDVAVKMLNV-------- 56

Query: 56  FPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQN 115
                 + +  Q+  F              NE+ V+RK       H N++          
Sbjct: 57  -----TAPTPQQLQAF-------------KNEVGVLRKT-----RHVNILLFMGYSTAPQ 93

Query: 116 GVHLILELCSGGELFDRIVAQERYMEVGAAAVI-RQIAEGLAALHQANIVHRDLKPENCL 174
            + ++ + C G  L+  + A E   E+     I RQ A G+  LH  +I+HRDLK  N  
Sbjct: 94  -LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIF 152

Query: 175 FLNDREDSPLKIMDFGLSSVEGYT---DPVVGLFGSIDYVSPEALLQD---RITSKSDMW 228
                ED+ +KI DFGL++ +           L GSI +++PE +        + +SD++
Sbjct: 153 L---HEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVY 209

Query: 229 SLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLT---- 284
           + G++LY L++G  P+   +NR   Q+I              + S+  + +  L+     
Sbjct: 210 AFGIVLYELMTGQLPYSNINNR--DQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLK 267

Query: 285 VDPNRRPSAQELLNH 299
              + RPS   +L  
Sbjct: 268 KKRDERPSFPRILAE 282

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score =  138 bits (349), Expect = 6e-37
 Identities = 73/336 (21%), Positives = 124/336 (36%), Gaps = 95/336 (28%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
           ++YE   ++G G + +V +   K  G    VAIK      S                 + 
Sbjct: 25  EKYENLGLVGEGSYGMVMKCRNKDTGRI--VAIKKFLE--SDDDKMVK-------KIAM- 72

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELC----- 124
               R            EI +++++      H N+++L +V + +   +L+ E       
Sbjct: 73  ----R------------EIKLLKQL-----RHENLVNLLEVCKKKKRWYLVFEFVDHTIL 111

Query: 125 ----SGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRE 180
                     D  V Q +Y+         QI  G+   H  NI+HRD+KPEN + ++   
Sbjct: 112 DDLELFPNGLDYQVVQ-KYL--------FQIINGIGFCHSHNIIHRDIKPEN-ILVSQSG 161

Query: 181 DSPLKIMDFGL-----SSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKS-DMWSLGVIL 234
              +K+ DFG      +  E Y D V   +    Y +PE L+ D    K+ D+W++G ++
Sbjct: 162 V--VKLCDFGFARTLAAPGEVYDDEVATRW----YRAPELLVGDVKYGKAVDVWAIGCLV 215

Query: 235 YILLSGYPPFIAQSNRQKQQMIMA--GEFSFYEQTW------------------------ 268
             +  G P F   S+  +   IM   G      +                          
Sbjct: 216 TEMFMGEPLFPGDSDIDQLYHIMMCLGNLI--PRHQELFNKNPVFAGVRLPEIKEREPLE 273

Query: 269 ---KNISSSAKQLISSLLTVDPNRRPSAQELLNHPW 301
                +S     L    L +DP++RP   ELL+H +
Sbjct: 274 RRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDF 309

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score =  139 bits (352), Expect = 1e-36
 Identities = 81/302 (26%), Positives = 124/302 (41%), Gaps = 48/302 (15%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQV-AIKTLRRIGSTTPYGFPGSRGSSSSSQI 68
           ++YEV  ++GRG F  V+    K    T +V A+K L +                   ++
Sbjct: 69  EDYEVVKVIGRGAFGEVQLVRHK---STRKVYAMKLLSK------------------FEM 107

Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
                R       A    E    R I+   +  P V+ L+  ++D   +++++E   GG+
Sbjct: 108 ---IKRSDS----AFFWEE----RDIMAFAN-SPWVVQLFYAFQDDRYLYMVMEYMPGGD 155

Query: 129 LFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMD 188
           L   +++     E  A     ++   L A+H    +HRD+KP+N L   D+    LK+ D
Sbjct: 156 LV-NLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL--DK-SGHLKLAD 211

Query: 189 FGLSSVEGYTDPVVG--LFGSIDYVSPEALLQDRITSK----SDMWSLGVILYILLSGYP 242
           FG          V      G+ DY+SPE L             D WS+GV LY +L G  
Sbjct: 212 FGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDT 271

Query: 243 PFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR---PSAQELLNH 299
           PF A S       IM  + S       +IS  AK LI + LT D   R      +E+  H
Sbjct: 272 PFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLT-DREVRLGRNGVEEIKRH 330

Query: 300 PW 301
            +
Sbjct: 331 LF 332

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score =  135 bits (343), Expect = 2e-36
 Identities = 71/297 (23%), Positives = 127/297 (42%), Gaps = 39/297 (13%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
           +E E    +G+GGF +V +G          VAIK+L    S           +    +  
Sbjct: 19  NEIEYEKQIGKGGFGLVHKGRLVKDKSV--VAIKSLILGDSEGE--------TEMIEKFQ 68

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
            F               E+ +M  +      HPN++ LY +    N   +++E    G+L
Sbjct: 69  EF-------------QREVFIMSNLN-----HPNIVKLYGLM--HNPPRMVMEFVPCGDL 108

Query: 130 FDRIVAQERYMEVGAAAVI-RQIAEGLAALHQAN--IVHRDLKPENCLFLNDREDSP--L 184
           + R++ +   ++      +   IA G+  +   N  IVHRDL+  N    +  E++P   
Sbjct: 109 YHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCA 168

Query: 185 KIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRI--TSKSDMWSLGVILYILLSGYP 242
           K+ DFGLS    ++  V GL G+  +++PE +  +    T K+D +S  +ILY +L+G  
Sbjct: 169 KVADFGLSQQSVHS--VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEG 226

Query: 243 PFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH 299
           PF   S  + + + M  E        ++     + +I    + DP +RP    ++  
Sbjct: 227 PFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKE 283

>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A* Length = 183

 Score =  132 bits (333), Expect = 2e-36
 Identities = 27/171 (15%), Positives = 59/171 (34%), Gaps = 10/171 (5%)

Query: 350 LKNLLGSHDLNEEEIQNLRIHFRTICANG-----DNATLSEFEEVLKAMNMSSLVPLAPR 404
           L        L ++EI      F  +          +       E + ++      P   R
Sbjct: 5   LAEYQDLTFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILSLPELKANPFKER 64

Query: 405 IFDLFD-NNRDGTVDMREILCGFSSLR-KSQGDDALRLCFQMYDIDRSGCITKEEVASML 462
           I  +F  +    ++   + L   S     +  D      F+++D D  G + +E+++ ++
Sbjct: 65  ICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLV 124

Query: 463 RALPDDCLPVDITEPG---KLDEIFDLMDANNDGKVTFDEFRAAMQRDSSL 510
             L  +     ++       +D I +  D + DG +   EF+  + R    
Sbjct: 125 NCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISRSPDF 175

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score =  133 bits (338), Expect = 9e-36
 Identities = 82/331 (24%), Positives = 137/331 (41%), Gaps = 88/331 (26%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
           ++Y   + +G G + VV +      GET   A+K +R        G P       S+ I 
Sbjct: 2   EKYHGLEKIGEGTYGVVYKAQNNY-GET--FALKKIRL--EKEDEGIP-------STTI- 48

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
               R            EI +++++      H N++ LYDV   +  + L+ E     +L
Sbjct: 49  ----R------------EISILKEL-----KHSNIVKLYDVIHTKKRLVLVFEHLDQ-DL 86

Query: 130 FDRIVAQERYMEVGAAAV--------IRQIAEGLAALHQANIVHRDLKPENCLFLNDRED 181
                  ++ ++V    +        + Q+  G+A  H   ++HRDLKP+N L   + E 
Sbjct: 87  -------KKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGE- 138

Query: 182 SPLKIMDFGL-----SSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKS-DMWSLGVILY 235
             LKI DFGL       V  YT  +V L+    Y +P+ L+  +  S + D+WS+G I  
Sbjct: 139 --LKIADFGLARAFGIPVRKYTHEIVTLW----YRAPDVLMGSKKYSTTIDIWSVGCIFA 192

Query: 236 ILLSGYPPFIAQSNRQKQQMIMA--------------------GEFSFY-----EQTWKN 270
            +++G P F   S   +   I                        F+ Y     E   K 
Sbjct: 193 EMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKG 252

Query: 271 ISSSAKQLISSLLTVDPNRRPSAQELLNHPW 301
           +  S   L+S +L +DPN+R +A++ L H +
Sbjct: 253 LDESGIDLLSKMLKLDPNQRITAKQALEHAY 283

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score =  134 bits (339), Expect = 9e-36
 Identities = 73/311 (23%), Positives = 119/311 (38%), Gaps = 67/311 (21%)

Query: 6   RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSS 65
           + + + Y++ D LG GG S V            +VAIK +                    
Sbjct: 7   KIINERYKIVDKLGGGGMSTVYLAEDTILNI--KVAIKAIF------------------- 45

Query: 66  SQIGFFPTRKQVSVSDALLTNEILVMR-----KIVENVSPHPNVIDLYDVYEDQNGVHLI 120
                                E  + R          +S H N++ + DV E+ +  +L+
Sbjct: 46  ---------------IPPREKEETLKRFEREVHNSSQLS-HQNIVSMIDVDEEDDCYYLV 89

Query: 121 LELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRE 180
           +E   G  L + I +        A     QI +G+   H   IVHRD+KP+N L      
Sbjct: 90  MEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILI---DS 146

Query: 181 DSPLKIMDFGL-----SSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY 235
           +  LKI DFG+      +    T+ V+   G++ Y SPE    +     +D++S+G++LY
Sbjct: 147 NKTLKIFDFGIAKALSETSLTQTNHVL---GTVQYFSPEQAKGEATDECTDIYSIGIVLY 203

Query: 236 ILLSGYPPF-------IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPN 288
            +L G PPF       IA  + Q     +  +        K+I  S   +I      D  
Sbjct: 204 EMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVR------KDIPQSLSNVILRATEKDKA 257

Query: 289 RRP-SAQELLN 298
            R  + QE+ +
Sbjct: 258 NRYKTIQEMKD 268

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score =  137 bits (346), Expect = 9e-36
 Identities = 74/315 (23%), Positives = 125/315 (39%), Gaps = 54/315 (17%)

Query: 3   QETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQV-AIKTLRRIGSTTPYGFPGSRG 61
           +E R   D++E+  ++GRG FS V     K   +T QV A+K +                
Sbjct: 54  KEVRLQRDDFEILKVIGRGAFSEVAVVKMK---QTGQVYAMKIMN--------------- 95

Query: 62  SSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLIL 121
                        K   +    ++      R ++ N      +  L+  ++D+N ++L++
Sbjct: 96  -------------KWDMLKRGEVSC-FREERDVLVNGD-RRWITQLHFAFQDENYLYLVM 140

Query: 122 ELCSGGELFDRIVAQE-RYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRE 180
           E   GG+L   +     R     A   + +I   + ++H+   VHRD+KP+N L   DR 
Sbjct: 141 EYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILL--DR- 197

Query: 181 DSPLKIMDFGLSSVEGYTDPVVG---LFGSIDYVSPEALLQDRITSKS-------DMWSL 230
              +++ DFG   ++   D  V      G+ DY+SPE L        +       D W+L
Sbjct: 198 CGHIRLADFGSC-LKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWAL 256

Query: 231 GVILYILLSGYPPFIAQSNRQKQQMIMAGEFSF-YEQTWKNISSSAKQLISSLLTVDPNR 289
           GV  Y +  G  PF A S  +    I+  +         + +   A+  I  LL   P  
Sbjct: 257 GVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLC-PPET 315

Query: 290 R---PSAQELLNHPW 301
           R     A +   HP+
Sbjct: 316 RLGRGGAGDFRTHPF 330

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score =  134 bits (340), Expect = 2e-35
 Identities = 68/310 (21%), Positives = 131/310 (42%), Gaps = 53/310 (17%)

Query: 3   QETRKLT-DEYEVTDILGRGGFSVVRRGIKKTCGETNQV-AIKTLRRIGSTTPYGFPGSR 60
               ++   ++    +LG+G F  V    +K    T+++ A+K L+              
Sbjct: 12  GNRDRMKLTDFNFLMVLGKGSFGKVMLSERK---GTDELYAVKILK-------------- 54

Query: 61  GSSSSSQIGFFPTRKQVSVSDALLTNEI---LVMRKIVENVSPHPNVIDLYDVYEDQNGV 117
                         K V + D    +++   +V ++++      P +  L+  ++  + +
Sbjct: 55  --------------KDVVIQD----DDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL 96

Query: 118 HLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLN 177
           + ++E  +GG+L   I    R+ E  A     +IA GL  L    I++RDLK +N +   
Sbjct: 97  YFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVML-- 154

Query: 178 DREDSPLKIMDFGLSSVEGYTDPVVGLF-GSIDYVSPEALLQDRITSKSDMWSLGVILYI 236
           D  +  +KI DFG+     +       F G+ DY++PE +         D W+ GV+LY 
Sbjct: 155 D-SEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYE 213

Query: 237 LLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR-----P 291
           +L+G  PF  +   +  Q IM    ++     K++S  A  +   L+T  P +R      
Sbjct: 214 MLAGQAPFEGEDEDELFQSIMEHNVAYP----KSMSKEAVAICKGLMTKHPGKRLGCGPE 269

Query: 292 SAQELLNHPW 301
             +++  H +
Sbjct: 270 GERDIKEHAF 279

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score =  132 bits (335), Expect = 3e-35
 Identities = 58/297 (19%), Positives = 115/297 (38%), Gaps = 44/297 (14%)

Query: 16  DILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRK 75
             +GRG F  V +G+         VA   L+                           RK
Sbjct: 32  IEIGRGSFKTVYKGLDTETTVE--VAWCELQ--------------------------DRK 63

Query: 76  QVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYED----QNGVHLILELCSGGELFD 131
                      E  +++ +      HPN++  YD +E     +  + L+ EL + G L  
Sbjct: 64  LTKSERQRFKEEAEMLKGL-----QHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKT 118

Query: 132 RIVAQERYMEVGAAAVIRQIAEGLAALHQAN--IVHRDLKPENCLFLNDREDSPLKIMDF 189
            +   +        +  RQI +GL  LH     I+HRDLK +N           +KI D 
Sbjct: 119 YLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFI--TGPTGSVKIGDL 176

Query: 190 GLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSN 249
           GL++++  +     + G+ ++++PE + +++     D+++ G+ +  + +   P+ ++  
Sbjct: 177 GLATLKRASF-AKAVIGTPEFMAPE-MYEEKYDESVDVYAFGMCMLEMATSEYPY-SECQ 233

Query: 250 RQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDS 306
              Q               K      K++I   +  + + R S ++LLNH +   ++
Sbjct: 234 NAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQEET 290

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score =  133 bits (336), Expect = 3e-35
 Identities = 80/332 (24%), Positives = 137/332 (41%), Gaps = 89/332 (26%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
           ++Y+  + +G G + VV +      G    VA+K +R        G P       S+ I 
Sbjct: 21  EKYQKLEKVGEGTYGVVYKAKDSQ-GRI--VALKRIRL--DAEDEGIP-------STAI- 67

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
               R            EI +++++      HPN++ L DV   +  + L+ E     +L
Sbjct: 68  ----R------------EISLLKEL-----HHPNIVSLIDVIHSERCLTLVFEFMEK-DL 105

Query: 130 FDRIVAQERYMEVGAAAV--------IRQIAEGLAALHQANIVHRDLKPENCLFLNDRED 181
                  ++ ++     +        + Q+  G+A  HQ  I+HRDLKP+N L  +D   
Sbjct: 106 -------KKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGA- 157

Query: 182 SPLKIMDFGL-----SSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKS-DMWSLGVILY 235
             LK+ DFGL       V  YT  VV L+    Y +P+ L+  +  S S D+WS+G I  
Sbjct: 158 --LKLADFGLARAFGIPVRSYTHEVVTLW----YRAPDVLMGSKKYSTSVDIWSIGCIFA 211

Query: 236 ILLSGYPPFIAQSNRQKQQMIM-------------------AGEFSF-------YEQTWK 269
            +++G P F   ++  +   I                      + +F       +     
Sbjct: 212 EMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIP 271

Query: 270 NISSSAKQLISSLLTVDPNRRPSAQELLNHPW 301
                   L+S++L  DPN+R SA++ +NHP+
Sbjct: 272 GFCQEGIDLLSNMLCFDPNKRISARDAMNHPY 303

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score =  133 bits (338), Expect = 4e-35
 Identities = 76/306 (24%), Positives = 129/306 (42%), Gaps = 49/306 (16%)

Query: 3   QETRKLT-DEYEVTDILGRGGFSVVRRGIKKTCGETNQV-AIKTLRRIGSTTPYGFPGSR 60
               KL  +++ +  +LG+G F  V     K   +TNQ  AIK L+              
Sbjct: 9   SLQIKLKIEDFILHKMLGKGSFGKVFLAEFK---KTNQFFAIKALK-------------- 51

Query: 61  GSSSSSQIGFFPTRKQVSVSDALLTNEI---LVMRKIVENVSPHPNVIDLYDVYEDQNGV 117
                         K V + D    +++   +V ++++     HP +  ++  ++ +  +
Sbjct: 52  --------------KDVVLMD----DDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 93

Query: 118 HLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLN 177
             ++E  +GG+L   I +  ++    A     +I  GL  LH   IV+RDLK +N L   
Sbjct: 94  FFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILL-- 151

Query: 178 DREDSPLKIMDFGLSSVEGYTDPVVGLF-GSIDYVSPEALLQDRITSKSDMWSLGVILYI 236
           D++   +KI DFG+       D     F G+ DY++PE LL  +     D WS GV+LY 
Sbjct: 152 DKDGH-IKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYE 210

Query: 237 LLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR-PSAQE 295
           +L G  PF  Q   +    I      +     + +   AK L+  L   +P +R     +
Sbjct: 211 MLIGQSPFHGQDEEELFHSIRMDNPFYP----RWLEKEAKDLLVKLFVREPEKRLGVRGD 266

Query: 296 LLNHPW 301
           +  HP 
Sbjct: 267 IRQHPL 272

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score =  132 bits (335), Expect = 5e-35
 Identities = 59/306 (19%), Positives = 115/306 (37%), Gaps = 58/306 (18%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
           ++ E+ +++G+G F  V  G         +VAI+ +                  +  Q+ 
Sbjct: 33  EQLEIGELIGKGRFGQVYHGRWH-----GEVAIRLIDI-------------ERDNEDQLK 74

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
            F               E++  R+       H NV+           + +I  LC G  L
Sbjct: 75  AF-------------KREVMAYRQTR-----HENVVLFMGACMSPPHLAIITSLCKGRTL 116

Query: 130 FDRIVAQERYMEVGAAAVI-RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMD 188
           +  +   +  ++V     I ++I +G+  LH   I+H+DLK +N  +    ++  + I D
Sbjct: 117 YSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFY----DNGKVVITD 172

Query: 189 FGLSSVEGYT------DPVVGLFGSIDYVSPEALLQDRI---------TSKSDMWSLGVI 233
           FGL S+ G        D +    G + +++PE + Q            +  SD+++LG I
Sbjct: 173 FGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTI 232

Query: 234 LYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSA 293
            Y L +   PF  Q        +  G       +   +      ++      +   RP+ 
Sbjct: 233 WYELHAREWPFKTQPAEAIIWQMGTGMKP--NLSQIGMGKEISDILLFCWAFEQEERPTF 290

Query: 294 QELLNH 299
            +L++ 
Sbjct: 291 TKLMDM 296

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score =  132 bits (333), Expect = 6e-35
 Identities = 81/340 (23%), Positives = 136/340 (40%), Gaps = 73/340 (21%)

Query: 9   TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQI 68
            + +   + +G+G F  V +GI     +   VAIK                        I
Sbjct: 21  EELFTKLEKIGKGSFGEVFKGIDNRTQKV--VAIK-----------------------II 55

Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
                 ++       +  EI V+ +        P V   Y  Y     + +I+E   GG 
Sbjct: 56  DL----EEAEDEIEDIQQEITVLSQ-----CDSPYVTKYYGSYLKDTKLWIIMEYLGGGS 106

Query: 129 LFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMD 188
             D ++      E   A ++R+I +GL  LH    +HRD+K  N L L+  E   +K+ D
Sbjct: 107 ALD-LLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVL-LS--EHGEVKLAD 162

Query: 189 FG----LSSVEGYTDPVVGL-FGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPP 243
           FG    L+  +   +  VG  F    +++PE + Q    SK+D+WSLG+    L  G PP
Sbjct: 163 FGVAGQLTDTQIKRNTFVGTPF----WMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 218

Query: 244 F-----------IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPS 292
                       I ++N    +               N S   K+ + + L  +P+ RP+
Sbjct: 219 HSELHPMKVLFLIPKNNPPTLE--------------GNYSKPLKEFVEACLNKEPSFRPT 264

Query: 293 AQELLNHPWVIGDSAKEEEMDAEIVSRLQSFNARRKLRAA 332
           A+ELL H + I  +AK+     E++ R + + A +    +
Sbjct: 265 AKELLKHKF-ILRNAKKTSYLTELIDRYKRWKAEQSHDDS 303

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score =  137 bits (346), Expect = 6e-35
 Identities = 89/309 (28%), Positives = 141/309 (45%), Gaps = 49/309 (15%)

Query: 4   ETRKLT-DEYEVTDILGRGGFSVVRRGIKKTCGETNQV-AIKTLR--RIGSTTPYGFPGS 59
           E + +T + +    +LG+GGF  V     +    T ++ A K L   RI           
Sbjct: 177 ERQPVTKNTFRQYRVLGKGGFGEVCACQVR---ATGKMYACKKLEKKRIKK--------- 224

Query: 60  RGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHL 119
                         RK      A+  NE    ++I+E V+    V+ L   YE ++ + L
Sbjct: 225 --------------RKGE----AMALNE----KQILEKVN-SRFVVSLAYAYETKDALCL 261

Query: 120 ILELCSGGELFDRI--VAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLN 177
           +L L +GG+L   I  + Q  + E  A     +I  GL  LH+  IV+RDLKPEN L L+
Sbjct: 262 VLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENIL-LD 320

Query: 178 DREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYIL 237
           D     ++I D GL+        + G  G++ Y++PE +  +R T   D W+LG +LY +
Sbjct: 321 D--HGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEM 378

Query: 238 LSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR-----PS 292
           ++G  PF  +  + K++ +        E+  +  S  A+ L S LL  DP  R      S
Sbjct: 379 IAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGS 438

Query: 293 AQELLNHPW 301
           A+E+  HP 
Sbjct: 439 AREVKEHPL 447

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score =  134 bits (340), Expect = 9e-35
 Identities = 80/309 (25%), Positives = 140/309 (45%), Gaps = 49/309 (15%)

Query: 2   GQETRKLT-DEYEVTDILGRGGFSVVRRGIKKTCGETNQV-AIKTLRRIGSTTPYGFPGS 59
            +   ++T +E+E   +LG+G F  V    +K    T +  A+K L+             
Sbjct: 139 AKPKHRVTMNEFEYLKLLGKGTFGKVILVKEK---ATGRYYAMKILK------------- 182

Query: 60  RGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHL 119
                          K+V V+   + +  L   ++++N   HP +  L   ++  + +  
Sbjct: 183 ---------------KEVIVAKDEVAH-TLTENRVLQNSR-HPFLTALKYSFQTHDRLCF 225

Query: 120 ILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALH-QANIVHRDLKPENCLFLND 178
           ++E  +GGELF  +  +  + E  A     +I   L  LH + N+V+RDLK EN +   D
Sbjct: 226 VMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML--D 283

Query: 179 REDSPLKIMDFGLSSVEGYTDPVVGLF-GSIDYVSPEALLQDRITSKSDMWSLGVILYIL 237
           + D  +KI DFGL          +  F G+ +Y++PE L  +      D W LGV++Y +
Sbjct: 284 K-DGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 342

Query: 238 LSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR----PS- 292
           + G  PF  Q + +  ++I+  E  F     + +   AK L+S LL  DP +R       
Sbjct: 343 MCGRLPFYNQDHEKLFELILMEEIRFP----RTLGPEAKSLLSGLLKKDPKQRLGGGSED 398

Query: 293 AQELLNHPW 301
           A+E++ H +
Sbjct: 399 AKEIMQHRF 407

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score =  132 bits (335), Expect = 1e-34
 Identities = 79/341 (23%), Positives = 118/341 (34%), Gaps = 87/341 (25%)

Query: 1   MGQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLR-RIGSTTPYGFPGS 59
           M  + +     YE  D LG G F+ V +   K   +   VAIK ++    S    G    
Sbjct: 1   MALDVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQI--VAIKKIKLGHRSEAKDGIN-- 56

Query: 60  RGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHL 119
                                 AL   EI +++++      HPN+I L D +  ++ + L
Sbjct: 57  --------------------RTAL--REIKLLQEL-----SHPNIIGLLDAFGHKSNISL 89

Query: 120 ILELC---------SGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKP 170
           + +               +      +  YM            +GL  LHQ  I+HRDLKP
Sbjct: 90  VFDFMETDLEVIIKDNSLVLTPSHIK-AYM--------LMTLQGLEYLHQHWILHRDLKP 140

Query: 171 ENCLFLNDREDSPLKIMDFGL-----SSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKS 225
            N L L++     LK+ DFGL     S    YT  VV  +    Y +PE L   R+    
Sbjct: 141 NN-LLLDENGV--LKLADFGLAKSFGSPNRAYTHQVVTRW----YRAPELLFGARMYGVG 193

Query: 226 -DMWSLGVILYILLSGYPPFIAQSNRQKQQMIM-------------------AGEFSFY- 264
            DMW++G IL  LL   P     S+  +   I                       F  + 
Sbjct: 194 VDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFP 253

Query: 265 ----EQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPW 301
                  +         LI  L   +P  R +A + L   +
Sbjct: 254 GIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKY 294

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score =  133 bits (336), Expect = 1e-34
 Identities = 63/217 (29%), Positives = 105/217 (48%), Gaps = 16/217 (7%)

Query: 92  RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQI 151
           R ++     HP ++ L+  ++  + ++ +L+  +GGELF  +  +  ++E  A     +I
Sbjct: 89  RNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEI 148

Query: 152 AEGLAALHQANIVHRDLKPENCLFLNDREDSP--LKIMDFGLSSVEGYTDPVVGLF-GSI 208
           A  L  LH  NIV+RDLKPEN L      DS   + + DFGL       +     F G+ 
Sbjct: 149 ASALGYLHSLNIVYRDLKPENILL-----DSQGHIVLTDFGLCKENIEHNSTTSTFCGTP 203

Query: 209 DYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTW 268
           +Y++PE L +       D W LG +LY +L G PPF +++  +    I+           
Sbjct: 204 EYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK---- 259

Query: 269 KNISSSAKQLISSLLTVDPNRR----PSAQELLNHPW 301
            NI++SA+ L+  LL  D  +R        E+ +H +
Sbjct: 260 PNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVF 296

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score =  131 bits (331), Expect = 1e-34
 Identities = 75/301 (24%), Positives = 125/301 (41%), Gaps = 62/301 (20%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
            E EV +++GRG F VV +   K   +   VAIK +                  S S+  
Sbjct: 8   KEIEVEEVVGRGAFGVVCKA--KWRAKD--VAIKQIE-----------------SESERK 46

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
            F               E+  + ++      HPN++ LY      N V L++E   GG L
Sbjct: 47  AF-------------IVELRQLSRVN-----HPNIVKLYGAC--LNPVCLVMEYAEGGSL 86

Query: 130 FDRIVAQERYMEVGAAAVIR---QIAEGLAALHQAN---IVHRDLKPENCLFLNDREDSP 183
           ++ +   E      AA  +    Q ++G+A LH      ++HRDLKP N L       + 
Sbjct: 87  YNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLL--VAGGTV 144

Query: 184 LKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPP 243
           LKI DFG +        +    GS  +++PE       + K D++S G+IL+ +++   P
Sbjct: 145 LKICDFGTACDIQTH--MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKP 202

Query: 244 F--IAQSNRQKQQMIMAG---EFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN 298
           F  I     +    +  G            KN+    + L++   + DP++RPS +E++ 
Sbjct: 203 FDEIGGPAFRIMWAVHNGTRPPLI------KNLPKPIESLMTRCWSKDPSQRPSMEEIVK 256

Query: 299 H 299
            
Sbjct: 257 I 257

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score =  132 bits (334), Expect = 1e-34
 Identities = 73/311 (23%), Positives = 128/311 (41%), Gaps = 54/311 (17%)

Query: 3   QETRKLT-DEYEVTDILGRGGFSVVRRGIKKTCGETNQV-AIKTLRRIGSTTPYGFPGSR 60
             + +L  D +E   +LG+G F  V     K   ET  + A+K L+              
Sbjct: 15  NSSNRLGIDNFEFIRVLGKGSFGKVMLARVK---ETGDLYAVKVLK-------------- 57

Query: 61  GSSSSSQIGFFPTRKQVSVSDALLTNEI---LVMRKIVENVSPHPNVIDLYDVYEDQNGV 117
                         K V + D    +++   +  ++I+     HP +  L+  ++  + +
Sbjct: 58  --------------KDVILQD----DDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRL 99

Query: 118 HLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLN 177
             ++E  +GG+L   I    R+ E  A     +I   L  LH   I++RDLK +N L   
Sbjct: 100 FFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLL-- 157

Query: 178 DREDSPLKIMDFGLSSVEGYTDPVVGLF-GSIDYVSPEALLQDRITSKSDMWSLGVILYI 236
           D  +   K+ DFG+             F G+ DY++PE L +       D W++GV+LY 
Sbjct: 158 D-HEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYE 216

Query: 237 LLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR------ 290
           +L G+ PF A++     + I+  E  +       +   A  ++ S +T +P  R      
Sbjct: 217 MLCGHAPFEAENEDDLFEAILNDEVVYP----TWLHEDATGILKSFMTKNPTMRLGSLTQ 272

Query: 291 PSAQELLNHPW 301
                +L HP+
Sbjct: 273 GGEHAILRHPF 283

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score =  131 bits (331), Expect = 1e-34
 Identities = 83/341 (24%), Positives = 122/341 (35%), Gaps = 99/341 (29%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLR----RIGSTTPYGFPGSRGSSSS 65
             YE    +G G +  V +      G    VA+K++R      G     G P S      
Sbjct: 9   SRYEPVAEIGVGAYGTVYKARDPHSGHF--VALKSVRVPNGGGGGG---GLPIS------ 57

Query: 66  SQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDV-----YEDQNGVHLI 120
                            +   E+ ++R++      HPNV+ L DV      + +  V L+
Sbjct: 58  ----------------TV--REVALLRRL--EAFEHPNVVRLMDVCATSRTDREIKVTLV 97

Query: 121 LELCSGGELFDRIVAQERYMEVGAAAVI---------RQIAEGLAALHQANIVHRDLKPE 171
            E     +L         Y++      +         RQ   GL  LH   IVHRDLKPE
Sbjct: 98  FEHVDQ-DL-------RTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPE 149

Query: 172 NCLFLNDREDSPLKIMDFGLSSVEG----YTDPVVGLFGSIDYVSPEALLQDRITSKSDM 227
           N + +       +K+ DFGL+ +       T  VV L+    Y +PE LLQ    +  DM
Sbjct: 150 N-ILVTSGGT--VKLADFGLARIYSYQMALTPVVVTLW----YRAPEVLLQSTYATPVDM 202

Query: 228 WSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFY----EQTW--------------- 268
           WS+G I   +    P F   S   +   I    F       E  W               
Sbjct: 203 WSVGCIFAEMFRRKPLFCGNSEADQLGKI----FDLIGLPPEDDWPRDVSLPRGAFPPRG 258

Query: 269 --------KNISSSAKQLISSLLTVDPNRRPSAQELLNHPW 301
                     +  S  QL+  +LT +P++R SA   L H +
Sbjct: 259 PRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSY 299

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score =  131 bits (333), Expect = 1e-34
 Identities = 75/302 (24%), Positives = 137/302 (45%), Gaps = 53/302 (17%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQV-AIKTLRRIGSTTPYGFPGSRGSSSSSQI 68
           ++++   +LG+G F  V    +K    T +  A+K LR                      
Sbjct: 5   NDFDYLKLLGKGTFGKVILVREK---ATGRYYAMKILR---------------------- 39

Query: 69  GFFPTRKQVSVSDALLTNEI---LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCS 125
                 K+V ++     +E+   +   ++++N   HP +  L   ++  + +  ++E  +
Sbjct: 40  ------KEVIIAK----DEVAHTVTESRVLQNTR-HPFLTALKYAFQTHDRLCFVMEYAN 88

Query: 126 GGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLK 185
           GGELF  +  +  + E  A     +I   L  LH  ++V+RD+K EN +   D+ D  +K
Sbjct: 89  GGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML--DK-DGHIK 145

Query: 186 IMDFGLSSVEGYTDPVVGLF-GSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF 244
           I DFGL          +  F G+ +Y++PE L  +      D W LGV++Y ++ G  PF
Sbjct: 146 ITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205

Query: 245 IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR-----PSAQELLNH 299
             Q + +  ++I+  E  F     + +S  AK L++ LL  DP +R       A+E++ H
Sbjct: 206 YNQDHERLFELILMEEIRFP----RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261

Query: 300 PW 301
            +
Sbjct: 262 RF 263

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score =  136 bits (344), Expect = 2e-34
 Identities = 68/311 (21%), Positives = 131/311 (42%), Gaps = 53/311 (17%)

Query: 2   GQETRKLT-DEYEVTDILGRGGFSVVRRGIKKTCGETNQV-AIKTLRRIGSTTPYGFPGS 59
                ++   ++    +LG+G F  V    +K    T+++ A+K L+             
Sbjct: 332 NGNRDRMKLTDFNFLMVLGKGSFGKVMLSERK---GTDELYAVKILK------------- 375

Query: 60  RGSSSSSQIGFFPTRKQVSVSDALLTNEI---LVMRKIVENVSPHPNVIDLYDVYEDQNG 116
                          K V + D    +++   +V ++++      P +  L+  ++  + 
Sbjct: 376 ---------------KDVVIQD----DDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDR 416

Query: 117 VHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFL 176
           ++ ++E  +GG+L   I    R+ E  A     +IA GL  L    I++RDLK +N +  
Sbjct: 417 LYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVML- 475

Query: 177 NDREDSPLKIMDFGLSSVEGYTDPVVGLF-GSIDYVSPEALLQDRITSKSDMWSLGVILY 235
            D  +  +KI DFG+     +       F G+ DY++PE +         D W+ GV+LY
Sbjct: 476 -D-SEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLY 533

Query: 236 ILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR----- 290
            +L+G  PF  +   +  Q IM    ++     K++S  A  +   L+T  P +R     
Sbjct: 534 EMLAGQAPFEGEDEDELFQSIMEHNVAYP----KSMSKEAVAICKGLMTKHPGKRLGCGP 589

Query: 291 PSAQELLNHPW 301
              +++  H +
Sbjct: 590 EGERDIKEHAF 600

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score =  135 bits (341), Expect = 2e-34
 Identities = 81/317 (25%), Positives = 130/317 (41%), Gaps = 62/317 (19%)

Query: 4   ETRKLT-DEYEVTDILGRGGFSVVRRGIKKTCGETNQV-AIKTLR--RIGSTTPYGFPGS 59
           E + +  D +    +LGRGGF  V     K    T ++ A K L   R+           
Sbjct: 178 EAQPMGEDWFLDFRVLGRGGFGEVFACQMK---ATGKLYACKKLNKKRLKK--------- 225

Query: 60  RGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHL 119
                         RK           E    +KI+  V     ++ L   +E +  + L
Sbjct: 226 --------------RKGY----QGAMVE----KKILAKVH-SRFIVSLAYAFETKTDLCL 262

Query: 120 ILELCSGGELFDRIVA----QERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLF 175
           ++ + +GG++   I         + E  A     QI  GL  LHQ NI++RDLKPEN L 
Sbjct: 263 VMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLL 322

Query: 176 LNDREDSPLKIMDFGLSSVEG--YTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVI 233
             D +D  ++I D GL+ VE         G  G+  +++PE LL +      D ++LGV 
Sbjct: 323 --D-DDGNVRISDLGLA-VELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVT 378

Query: 234 LYILLSGYPPFIAQSNRQK----QQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNR 289
           LY +++   PF A+  + +    +Q ++    ++        S ++K    +LL  DP +
Sbjct: 379 LYEMIAARGPFRARGEKVENKELKQRVLEQAVTYP----DKFSPASKDFCEALLQKDPEK 434

Query: 290 R-----PSAQELLNHPW 301
           R      S   L  HP 
Sbjct: 435 RLGFRDGSCDGLRTHPL 451

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score =  130 bits (329), Expect = 3e-34
 Identities = 73/333 (21%), Positives = 121/333 (36%), Gaps = 91/333 (27%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
           + Y   D LG G ++ V +G  K       VA+K    I      G P        + I 
Sbjct: 2   ETYIKLDKLGEGTYATVYKGKSKLTDNL--VALK---EIRLEHEEGAP-------CTAI- 48

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELC----- 124
               R            E+ +++ +      H N++ L+D+   +  + L+ E       
Sbjct: 49  ----R------------EVSLLKDL-----KHANIVTLHDIIHTEKSLTLVFEYLDKDLK 87

Query: 125 ----SGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRE 180
                 G + +    +  ++         Q+  GLA  H+  ++HRDLKP+N L     E
Sbjct: 88  QYLDDCGNIINMHNVK-LFL--------FQLLRGLAYCHRQKVLHRDLKPQNLLINERGE 138

Query: 181 DSPLKIMDFGL-----SSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKS-DMWSLGVIL 234
              LK+ DFGL        + Y + VV L+    Y  P+ LL     S   DMW +G I 
Sbjct: 139 ---LKLADFGLARAKSIPTKTYDNEVVTLW----YRPPDILLGSTDYSTQIDMWGVGCIF 191

Query: 235 YILLSGYPPFIAQSNRQKQQMIM---------------------AGEFSFY-----EQTW 268
           Y + +G P F   +  ++   I                         +  Y         
Sbjct: 192 YEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHA 251

Query: 269 KNISSSAKQLISSLLTVDPNRRPSAQELLNHPW 301
             + S    L++ LL  +   R SA++ + HP+
Sbjct: 252 PRLDSDGADLLTKLLQFEGRNRISAEDAMKHPF 284

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score =  129 bits (327), Expect = 4e-34
 Identities = 79/333 (23%), Positives = 131/333 (39%), Gaps = 90/333 (27%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
            +YE  + +G G +  V +   +   E   VA+K +R        G P       SS + 
Sbjct: 2   QKYEKLEKIGEGTYGTVFKAKNRETHEI--VALKRVRL--DDDDEGVP-------SSAL- 49

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELC----- 124
               R            EI +++++      H N++ L+DV      + L+ E C     
Sbjct: 50  ----R------------EICLLKEL-----KHKNIVRLHDVLHSDKKLTLVFEFCDQDLK 88

Query: 125 ----SGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRE 180
               S     D  + +  ++         Q+ +GL   H  N++HRDLKP+N L +N   
Sbjct: 89  KYFDSCNGDLDPEIVK-SFL--------FQLLKGLGFCHSRNVLHRDLKPQN-LLINRNG 138

Query: 181 DSPLKIMDFGL-----SSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKS-DMWSLGVIL 234
           +  LK+ +FGL       V  Y+  VV L+    Y  P+ L   ++ S S DMWS G I 
Sbjct: 139 E--LKLANFGLARAFGIPVRCYSAEVVTLW----YRPPDVLFGAKLYSTSIDMWSAGCIF 192

Query: 235 YILLS-GYPPFIAQSNRQKQQMIM-------------------AGEFSFY------EQTW 268
             L + G P F       + + I                       +  Y          
Sbjct: 193 AELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVV 252

Query: 269 KNISSSAKQLISSLLTVDPNRRPSAQELLNHPW 301
             ++++ + L+ +LL  +P +R SA+E L HP+
Sbjct: 253 PKLNATGRDLLQNLLKCNPVQRISAEEALQHPY 285

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score =  129 bits (327), Expect = 5e-34
 Identities = 64/298 (21%), Positives = 103/298 (34%), Gaps = 57/298 (19%)

Query: 18  LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQV 77
           LG+G F    +   +  GE   + +K L R    T   F                     
Sbjct: 18  LGKGCFGQAIKVTHRETGEV--MVMKELIRFDEETQRTF--------------------- 54

Query: 78  SVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE 137
                    E+ VMR +      HPNV+    V      ++ I E   GG L   I + +
Sbjct: 55  -------LKEVKVMRCL-----EHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMD 102

Query: 138 RYMEVGAAAVI-RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEG 196
                       + IA G+A LH  NI+HRDL   NCL    RE+  + + DFGL+ +  
Sbjct: 103 SQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLV---RENKNVVVADFGLARLMV 159

Query: 197 YTDPVVGLF---------------GSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGY 241
                                   G+  +++PE +       K D++S G++L  ++   
Sbjct: 160 DEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRV 219

Query: 242 PPFIAQSNRQKQQMIMAGEFSFYEQTW-KNISSSAKQLISSLLTVDPNRRPSAQELLN 298
                     +          F ++    N   S   +      +DP +RPS  +L +
Sbjct: 220 NAD--PDYLPRTMDFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEH 275

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score =  129 bits (326), Expect = 6e-34
 Identities = 73/316 (23%), Positives = 121/316 (38%), Gaps = 72/316 (22%)

Query: 6   RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSS 65
             L+D YE+ +ILG GG S V             VA+K LR                   
Sbjct: 8   SHLSDRYELGEILGFGGMSEVHLARDLRDHRD--VAVKVLR------------------- 46

Query: 66  SQIGFFPTRKQVSVSDALLTNEILVMR-----KIVENVSPHPNVIDLYDVYEDQNGVH-- 118
                            L  +    +R     +    ++ HP ++ +YD  E +      
Sbjct: 47  ---------------ADLARDPSFYLRFRREAQNAAALN-HPAIVAVYDTGEAETPAGPL 90

Query: 119 --LILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFL 176
             +++E   G  L D +  +       A  VI    + L   HQ  I+HRD+KP N +  
Sbjct: 91  PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMI- 149

Query: 177 NDREDSPLKIMDFGL-------SSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWS 229
                + +K+MDFG+        +    T  V+   G+  Y+SPE    D + ++SD++S
Sbjct: 150 --SATNAVKVMDFGIARAIADSGNSVTQTAAVI---GTAQYLSPEQARGDSVDARSDVYS 204

Query: 230 LGVILYILLSGYPPFIAQSN------RQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLL 283
           LG +LY +L+G PPF   S         ++  I            + +S+    ++   L
Sbjct: 205 LGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARH------EGLSADLDAVVLKAL 258

Query: 284 TVDPNRRP-SAQELLN 298
             +P  R  +A E+  
Sbjct: 259 AKNPENRYQTAAEMRA 274

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score =  128 bits (325), Expect = 7e-34
 Identities = 72/310 (23%), Positives = 135/310 (43%), Gaps = 71/310 (22%)

Query: 9   TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQI 68
             +Y   + +G+G    V   +    G+  +VAI+                       Q+
Sbjct: 19  KKKYTRFEKIGQGASGTVYTAMDVATGQ--EVAIR-----------------------QM 53

Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
                ++Q       + NEILVMR+     + +PN+++  D Y   + + +++E  +GG 
Sbjct: 54  ---NLQQQPKKEL--IINEILVMRE-----NKNPNIVNYLDSYLVGDELWVVMEYLAGGS 103

Query: 129 LFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMD 188
           L D +V +    E   AAV R+  + L  LH   ++HRD+K +N L      D  +K+ D
Sbjct: 104 LTD-VVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL---GMDGSVKLTD 159

Query: 189 FG----LSSVEGYTDPVVG-LFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPP 243
           FG    ++  +     +VG  +    +++PE + +     K D+WSLG++   ++ G PP
Sbjct: 160 FGFCAQITPEQSKRSTMVGTPY----WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215

Query: 244 F-----------IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPS 292
           +           IA +   +             Q  + +S+  +  ++  L +D  +R S
Sbjct: 216 YLNENPLRALYLIATNGTPEL------------QNPEKLSAIFRDFLNRCLEMDVEKRGS 263

Query: 293 AQELLNHPWV 302
           A+ELL H ++
Sbjct: 264 AKELLQHQFL 273

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score =  129 bits (326), Expect = 9e-34
 Identities = 71/341 (20%), Positives = 129/341 (37%), Gaps = 69/341 (20%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
           ++ +    +GRG +  V + + K  G+   +A+K +R                       
Sbjct: 22  EDLKDLGEIGRGAYGSVNKMVHKPSGQI--MAVKRIRSTVDEK----------------- 62

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
               +KQ       L  ++ V+ +  +     P ++  Y     +    + +EL S    
Sbjct: 63  ---EQKQ-------LLMDLDVVMRSSD----CPYIVQFYGALFREGDCWICMELMSTS-- 106

Query: 130 FDRIVAQERYMEVGA------AAVIRQIAEGLAALH-QANIVHRDLKPENCLFLNDREDS 182
           FD+       +            +     + L  L     I+HRD+KP N L L+   + 
Sbjct: 107 FDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNIL-LDRSGN- 164

Query: 183 PLKIMDFGLSSVEGYTDPVVGLFGSID---------YVSPEALLQDRI----TSKSDMWS 229
            +K+ DFG+S   G       L  SI          Y++PE +           +SD+WS
Sbjct: 165 -IKLCDFGIS---GQ------LVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWS 214

Query: 230 LGVILYILLSGYPPFIAQSNRQKQ-QMIMAGE-FSFYEQTWKNISSSAKQLISSLLTVDP 287
           LG+ LY L +G  P+   ++   Q   ++ G+         +  S S    ++  LT D 
Sbjct: 215 LGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDE 274

Query: 288 NRRPSAQELLNHPWVIGDSAKEEEMDAEIVSRLQSFNARRK 328
           ++RP  +ELL HP+++    +  E+   +   L    A   
Sbjct: 275 SKRPKYKELLKHPFILMYEERAVEVACYVCKILDQMPATPS 315

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score =  127 bits (322), Expect = 1e-33
 Identities = 73/306 (23%), Positives = 115/306 (37%), Gaps = 61/306 (19%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
            E  + +I+G GGF  V R      G+   VA+K  R                       
Sbjct: 7   AELTLEEIIGIGGFGKVYRA--FWIGDE--VAVKAARH---------------------- 40

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
                + +S +   +  E  +   +      HPN+I L  V   +  + L++E   GG L
Sbjct: 41  --DPDEDISQTIENVRQEAKLFAML-----KHPNIIALRGVCLKEPNLCLVMEFARGGPL 93

Query: 130 FDRIVAQERYMEVGAAAVIRQIAEGLAALHQAN---IVHRDLKPENCLFLNDREDSP--- 183
              +  +    ++       QIA G+  LH      I+HRDLK  N L L   E+     
Sbjct: 94  NRVLSGKRIPPDI-LVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSN 152

Query: 184 --LKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGY 241
             LKI DFGL+     T   +   G+  +++PE +     +  SD+WS GV+L+ LL+G 
Sbjct: 153 KILKITDFGLAREWHRTT-KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGE 211

Query: 242 PPF--------IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSA 293
            PF               K  + +                   +L+      DP+ RPS 
Sbjct: 212 VPFRGIDGLAVAYGVAMNKLALPIP----------STCPEPFAKLMEDCWNPDPHSRPSF 261

Query: 294 QELLNH 299
             +L+ 
Sbjct: 262 TNILDQ 267

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score =  128 bits (324), Expect = 2e-33
 Identities = 86/337 (25%), Positives = 144/337 (42%), Gaps = 90/337 (26%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
            +++  + LG G ++ V +G+ KT G    VA+K ++ + S    G P       S+ I 
Sbjct: 5   SQFKQLEKLGNGTYATVYKGLNKTTGVY--VALKEVK-LDSEE--GTP-------STAI- 51

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSG--G 127
               R            EI +M+++      H N++ LYDV   +N + L+ E       
Sbjct: 52  ----R------------EISLMKEL-----KHENIVRLYDVIHTENKLTLVFEFMDNDLK 90

Query: 128 ELFDRIVAQERYMEVGAAAV---IRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPL 184
           +  D          +    V     Q+ +GLA  H+  I+HRDLKP+N L +N R    L
Sbjct: 91  KYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQN-LLINKRGQ--L 147

Query: 185 KIMDFGL-----SSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKS-DMWSLGVILYILL 238
           K+ DFGL       V  ++  VV L+    Y +P+ L+  R  S S D+WS G IL  ++
Sbjct: 148 KLGDFGLARAFGIPVNTFSSEVVTLW----YRAPDVLMGSRTYSTSIDIWSCGCILAEMI 203

Query: 239 SGYPPFIAQSNRQKQQMIMAGEFSF----YEQTWKNISS--------------------- 273
           +G P F   ++ ++ ++I    F       E  W +++                      
Sbjct: 204 TGKPLFPGTNDEEQLKLI----FDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQ 259

Query: 274 ---------SAKQLISSLLTVDPNRRPSAQELLNHPW 301
                    +    +  LL ++P+ R SA++ L+HPW
Sbjct: 260 PHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPW 296

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score =  128 bits (323), Expect = 2e-33
 Identities = 75/310 (24%), Positives = 128/310 (41%), Gaps = 71/310 (22%)

Query: 9   TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQI 68
               +    +G G   +V    +K  G   QVA+K                        +
Sbjct: 44  RLLLDSYVKIGEGSTGIVCLAREKHSGR--QVAVK-----------------------MM 78

Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
                RKQ       L NE+++MR        H NV+++Y  Y     + +++E   GG 
Sbjct: 79  ---DLRKQQRREL--LFNEVVIMRD-----YQHFNVVEMYKSYLVGEELWVLMEFLQGGA 128

Query: 129 LFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMD 188
           L D IV+Q R  E   A V   + + LA LH   ++HRD+K ++ L      D  +K+ D
Sbjct: 129 LTD-IVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILL---TLDGRVKLSD 184

Query: 189 FG----LSSVEGYTDPVVGL-FGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPP 243
           FG    +S        +VG  +    +++PE + +    ++ D+WSLG+++  ++ G PP
Sbjct: 185 FGFCAQISKDVPKRKSLVGTPY----WMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPP 240

Query: 244 F-----------IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPS 292
           +           +  S   K             +    +S   +  +  +L  DP  R +
Sbjct: 241 YFSDSPVQAMKRLRDSPPPKL------------KNSHKVSPVLRDFLERMLVRDPQERAT 288

Query: 293 AQELLNHPWV 302
           AQELL+HP++
Sbjct: 289 AQELLDHPFL 298

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score =  128 bits (323), Expect = 2e-33
 Identities = 84/337 (24%), Positives = 128/337 (37%), Gaps = 94/337 (27%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
           D Y     LG G +  V + I     ET  VAIK +R        G P        + I 
Sbjct: 34  DRYRRITKLGEGTYGEVYKAIDTVTNET--VAIKRIRL--EHEEEGVP-------GTAI- 81

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
               R            E+ +++++      H N+I+L  V    + +HLI E     +L
Sbjct: 82  ----R------------EVSLLKEL-----QHRNIIELKSVIHHNHRLHLIFEYAEN-DL 119

Query: 130 FDRIVAQERYMEVG---AAAVIR----QIAEGLAALHQANIVHRDLKPENCLF--LNDRE 180
                  ++YM+     +  VI+    Q+  G+   H    +HRDLKP+N L    +  E
Sbjct: 120 -------KKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASE 172

Query: 181 DSPLKIMDFGL-----SSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKS-DMWSLGVIL 234
              LKI DFGL       +  +T  ++ L+    Y  PE LL  R  S S D+WS+  I 
Sbjct: 173 TPVLKIGDFGLARAFGIPIRQFTHEIITLW----YRPPEILLGSRHYSTSVDIWSIACIW 228

Query: 235 YILLSGYPPFIAQSNRQKQQMIMAGEFSFY----EQTW---------------------- 268
             +L   P F   S   +   I    F       + TW                      
Sbjct: 229 AEMLMKTPLFPGDSEIDQLFKI----FEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLK 284

Query: 269 ----KNISSSAKQLISSLLTVDPNRRPSAQELLNHPW 301
                 +      L++++L +DP +R SA+  L HP+
Sbjct: 285 RVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPY 321

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score =  127 bits (322), Expect = 3e-33
 Identities = 62/346 (17%), Positives = 123/346 (35%), Gaps = 58/346 (16%)

Query: 2   GQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRG 61
           GQ  +   ++ E    +G G    V +   +  G    +A+K +R               
Sbjct: 17  GQRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHV--IAVKQMR--------------- 59

Query: 62  SSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLIL 121
            S + +       K+       +  ++ V+ K  +     P ++  +  +     V + +
Sbjct: 60  RSGNKEE-----NKR-------ILMDLDVVLKSHD----CPYIVQCFGTFITNTDVFIAM 103

Query: 122 ELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALH-QANIVHRDLKPENCLFLNDRE 180
           EL        +   Q    E     +   I + L  L  +  ++HRD+KP N L L++R 
Sbjct: 104 ELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNIL-LDERG 162

Query: 181 DSPLKIMDFGLS-----SVEGYTDPVVGLFGSIDYVSPEALLQDRI-----TSKSDMWSL 230
              +K+ DFG+S                  G   Y++PE +            ++D+WSL
Sbjct: 163 Q--IKLCDFGISGRLVDDKAKDRS-----AGCAAYMAPERIDPPDPTKPDYDIRADVWSL 215

Query: 231 GVILYILLSGYPPFIAQSNRQKQ-QMIMAGE--FSFYEQTWKNISSSAKQLISSLLTVDP 287
           G+ L  L +G  P+       +    ++  E         +   S   +  +   LT D 
Sbjct: 216 GISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGF---SGDFQSFVKDCLTKDH 272

Query: 288 NRRPSAQELLNHPWVIGDSAKEEEMDAEIVSRLQSFNARRKLRAAA 333
            +RP   +LL H ++      E ++ +     +    + R   ++ 
Sbjct: 273 RKRPKYNKLLEHSFIKRYETLEVDVASWFKDVMAKTESPRSGPSSG 318

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score =  127 bits (322), Expect = 3e-33
 Identities = 83/334 (24%), Positives = 125/334 (37%), Gaps = 87/334 (26%)

Query: 10  DEYEVTDILGRGGFSVVRRGI-KKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQI 68
            +YE    +G G +  V +    K  G    VA+K +R    T   G P        S I
Sbjct: 11  QQYECVAEIGEGAYGKVFKARDLKNGGRF--VALKRVRV--QTGEEGMP-------LSTI 59

Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDV-----YEDQNGVHLILEL 123
                R            E+ V+R +      HPNV+ L+DV      + +  + L+ E 
Sbjct: 60  -----R------------EVAVLRHL--ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEH 100

Query: 124 C---------SGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCL 174
                        E        +  M         Q+  GL  LH   +VHRDLKP+N +
Sbjct: 101 VDQDLTTYLDKVPEPGVPTETIKDMM--------FQLLRGLDFLHSHRVVHRDLKPQN-I 151

Query: 175 FLNDREDSPLKIMDFGLSSVEG----YTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSL 230
            +       +K+ DFGL+ +       T  VV L+    Y +PE LLQ    +  D+WS+
Sbjct: 152 LVTSSGQ--IKLADFGLARIYSFQMALTSVVVTLW----YRAPEVLLQSSYATPVDLWSV 205

Query: 231 GVILYILLSGYPPFIAQSNRQKQQMI--MAG--------------EFSF-------YEQT 267
           G I   +    P F   S+  +   I  + G                +F        E+ 
Sbjct: 206 GCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKF 265

Query: 268 WKNISSSAKQLISSLLTVDPNRRPSAQELLNHPW 301
             +I    K L+   LT +P +R SA   L+HP+
Sbjct: 266 VTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY 299

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score =  129 bits (326), Expect = 4e-33
 Identities = 76/342 (22%), Positives = 125/342 (36%), Gaps = 89/342 (26%)

Query: 1   MGQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSR 60
            G+   +    Y    ++G G F VV    +    E+++VAIK + +             
Sbjct: 31  DGKTGEQREIAYTNCKVIGNGSFGVV---FQAKLVESDEVAIKKVLQ------------- 74

Query: 61  GSSSSSQIGFFPTRKQVSVSDALLTN-EILVMRKIVENVSPHPNVIDLYDVY------ED 113
                               D    N E+ +MR +      HPNV+DL   +      +D
Sbjct: 75  --------------------DKRFKNRELQIMRIV-----KHPNVVDLKAFFYSNGDKKD 109

Query: 114 QNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIR----QIAEGLAALHQANIVHRDLK 169
           +  ++L+LE      ++       +  +     +I+    Q+   LA +H   I HRD+K
Sbjct: 110 EVFLNLVLEYV-PETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIK 168

Query: 170 PENCLFLNDREDSPLKIMDFGL----SSVEGYTDPVVGLFGSIDYVSPEALLQDRI-TSK 224
           P+N L   D     LK++DFG      + E     +   +    Y +PE +      T+ 
Sbjct: 169 PQNLLL--DPPSGVLKLIDFGSAKILIAGEPNVSYICSRY----YRAPELIFGATNYTTN 222

Query: 225 SDMWSLGVILYILLSGYPPFIAQSNRQKQQMIM-----------------AGEFSF---Y 264
            D+WS G ++  L+ G P F  +S   +   I+                   E  F    
Sbjct: 223 IDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIR 282

Query: 265 EQTW-----KNISSSAKQLISSLLTVDPNRRPSAQELLNHPW 301
              +           A  LIS LL   P+ R +A E L HP+
Sbjct: 283 PHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPF 324

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score =  127 bits (320), Expect = 5e-33
 Identities = 74/338 (21%), Positives = 133/338 (39%), Gaps = 77/338 (22%)

Query: 9   TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQI 68
            + ++V + LG G +  V + I K  G+   VAIK                         
Sbjct: 28  EEVFDVLEKLGEGSYGSVYKAIHKETGQI--VAIK------------------------- 60

Query: 69  GFFPTRKQVSVSDAL--LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSG 126
                  QV V   L  +  EI +M++        P+V+  Y  Y     + +++E C  
Sbjct: 61  -------QVPVESDLQEIIKEISIMQQ-----CDSPHVVKYYGSYFKNTDLWIVMEYCGA 108

Query: 127 GELFDRIVAQERYM-EVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLK 185
           G + D I  + + + E   A +++   +GL  LH    +HRD+K  N L LN   +   K
Sbjct: 109 GSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNIL-LN--TEGHAK 165

Query: 186 IMDFG----LSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGY 241
           + DFG    L+      + V+   G+  +++PE + +      +D+WSLG+    +  G 
Sbjct: 166 LADFGVAGQLTDTMAKRNTVI---GTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK 222

Query: 242 PPF-----------IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR 290
           PP+           I  +                 +  +  S +    +   L   P +R
Sbjct: 223 PPYADIHPMRAIFMIPTNPPPTF------------RKPELWSDNFTDFVKQCLVKSPEQR 270

Query: 291 PSAQELLNHPWVIGDSAKEEEMDAEIVSRLQSFNARRK 328
            +A +LL HP+V   SAK   +  ++++       +R+
Sbjct: 271 ATATQLLQHPFV--RSAKGVSILRDLINEAMDVKLKRQ 306

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score =  127 bits (322), Expect = 5e-33
 Identities = 65/318 (20%), Positives = 133/318 (41%), Gaps = 63/318 (19%)

Query: 5   TRKLT-DEYEVTDILGRGGFSVVRRGIKKTCGETNQV-AIKTLRRIGSTTPYGFPGSRGS 62
              L   ++++  ++GRG ++ V     K   +T+++ A+K ++                
Sbjct: 3   MDPLGLQDFDLLRVIGRGSYAKVLLVRLK---KTDRIYAMKVVK---------------- 43

Query: 63  SSSSQIGFFPTRKQVSVSDALLTNEI---LVMRKIVENVSPHPNVIDLYDVYEDQNGVHL 119
                       K++   D     +I      + + E  S HP ++ L+  ++ ++ +  
Sbjct: 44  ------------KELVNDD----EDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87

Query: 120 ILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDR 179
           ++E  +GG+L   +  Q +  E  A     +I+  L  LH+  I++RDLK +N L   D 
Sbjct: 88  VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL--DS 145

Query: 180 EDSPLKIMDFGLSSVEGYTDPVVGLF-GSIDYVSPEALLQDRITSKSDMWSLGVILYILL 238
           E   +K+ D+G+             F G+ +Y++PE L  +      D W+LGV+++ ++
Sbjct: 146 EGH-IKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMM 204

Query: 239 SGYPPFIAQSNRQKQ---------QMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNR 289
           +G  PF    +             Q+I+  +        +++S  A  ++ S L  DP  
Sbjct: 205 AGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP----RSLSVKAASVLKSFLNKDPKE 260

Query: 290 R------PSAQELLNHPW 301
           R          ++  HP+
Sbjct: 261 RLGCHPQTGFADIQGHPF 278

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score =  126 bits (319), Expect = 6e-33
 Identities = 78/319 (24%), Positives = 131/319 (41%), Gaps = 68/319 (21%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
           D+YE+ +++G G  +VV+        E   VAIK                       +I 
Sbjct: 15  DDYELQEVIGSGATAVVQAAYCAPKKEK--VAIK-----------------------RIN 49

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
               +  +      L  EI  M +       HPN++  Y  +  ++ + L+++L SGG +
Sbjct: 50  LEKCQTSMD----ELLKEIQAMSQ-----CHHPNIVSYYTSFVVKDELWLVMKLLSGGSV 100

Query: 130 FDRIVAQERYMEVGA--------AAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRED 181
            D I       E  +        A ++R++ EGL  LH+   +HRD+K  N L L   ED
Sbjct: 101 LDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNIL-LG--ED 157

Query: 182 SPLKIMDFGLSSVEGYTDPVVGLFGSIDYV------SPEALLQDRI-TSKSDMWSLGVIL 234
             ++I DFG+S+       +        +V      +PE + Q R    K+D+WS G+  
Sbjct: 158 GSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITA 217

Query: 235 YILLSGYPPF-----------IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLL 283
             L +G  P+             Q++    +          ++  K    S +++IS  L
Sbjct: 218 IELATGAAPYHKYPPMKVLMLTLQNDPPSLE-----TGVQDKEMLKKYGKSFRKMISLCL 272

Query: 284 TVDPNRRPSAQELLNHPWV 302
             DP +RP+A ELL H + 
Sbjct: 273 QKDPEKRPTAAELLRHKFF 291

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score =  126 bits (319), Expect = 6e-33
 Identities = 65/297 (21%), Positives = 122/297 (41%), Gaps = 48/297 (16%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
            +  + + +G G F  V R   +  G    VA+K L                   + ++ 
Sbjct: 37  CDLNIKEKIGAGSFGTVHRA--EWHGSD--VAVKILME-------------QDFHAERVN 79

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
            F               E+ +M+++      HPN++           + ++ E  S G L
Sbjct: 80  EF-------------LREVAIMKRL-----RHPNIVLFMGAVTQPPNLSIVTEYLSRGSL 121

Query: 130 FDRIVAQERYMEVGAAAVIR---QIAEGLAALHQAN--IVHRDLKPENCLFLNDREDSPL 184
           +  +       ++     +     +A+G+  LH  N  IVHR+LK  N L ++  +   +
Sbjct: 122 YRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLL-VD--KKYTV 178

Query: 185 KIMDFGLSSVEGYTDPVV-GLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPP 243
           K+ DFGLS ++  T        G+ ++++PE L  +    KSD++S GVIL+ L +   P
Sbjct: 179 KVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP 238

Query: 244 FIAQSNRQKQQMIMAGEFSFYEQTW-KNISSSAKQLISSLLTVDPNRRPSAQELLNH 299
           +    N    Q++ A  F        +N++     +I    T +P +RPS   +++ 
Sbjct: 239 W---GNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDL 292

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score =  125 bits (317), Expect = 7e-33
 Identities = 67/325 (20%), Positives = 125/325 (38%), Gaps = 69/325 (21%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
           D+ E    LGRG + VV +      G+   +A+K +R   ++                  
Sbjct: 7   DDLEPIMELGRGAYGVVEKMRHVPSGQI--MAVKRIRATVNSQ----------------- 47

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGG-- 127
               +K+       L  ++     I       P  +  Y     +  V + +EL      
Sbjct: 48  ---EQKR-------LLMDL----DISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLD 93

Query: 128 ELFDRIVAQERYM-EVGAAAVIRQIAEGLAALH-QANIVHRDLKPENCLFLNDREDSPLK 185
           + + +++ + + + E     +   I + L  LH + +++HRD+KP N L +N      +K
Sbjct: 94  KFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVL-INALGQ--VK 150

Query: 186 IMDFGLS-----SVEGYTDPVVGLFGSIDYVSPEALLQDRI---------TSKSDMWSLG 231
           + DFG+S      V    D      G   Y++PE     RI         + KSD+WSLG
Sbjct: 151 MCDFGISGYLVDDVAKDID-----AGCKPYMAPE-----RINPELNQKGYSVKSDIWSLG 200

Query: 232 VILYILLSGYPPFIAQSN--RQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNR 289
           + +  L     P+ +     +Q +Q++           +   S+      S  L  +   
Sbjct: 201 ITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKF---SAEFVDFTSQCLKKNSKE 257

Query: 290 RPSAQELLNHPWVIGDSAKEEEMDA 314
           RP+  EL+ HP+     +K  ++ +
Sbjct: 258 RPTYPELMQHPFFTLHESKGTDVAS 282

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score =  131 bits (331), Expect = 9e-33
 Identities = 52/298 (17%), Positives = 106/298 (35%), Gaps = 59/298 (19%)

Query: 6   RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSS 65
             +  +YEV   +  GG   +   + +       V +K L   G                
Sbjct: 76  DIVAGQYEVKGCIAHGGLGWIYLALDRNV-NGRPVVLKGLVHSGDAE------------- 121

Query: 66  SQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNG-----VHLI 120
                                E    R+ +  V  HP+++ +++  E  +       +++
Sbjct: 122 -----AQAM---------AMAE----RQFLAEVV-HPSIVQIFNFVEHTDRHGDPVGYIV 162

Query: 121 LELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRE 180
           +E   G  L       ++     A A + +I   L+ LH   +V+ DLKPEN +   ++ 
Sbjct: 163 MEYVGGQSLKRSK--GQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEEQ- 219

Query: 181 DSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSG 240
              LK++D G  S       +    G+  + +PE +++   T  +D++++G  L  L   
Sbjct: 220 ---LKLIDLGAVSRINSFGYLY---GTPGFQAPE-IVRTGPTVATDIYTVGRTLAALTLD 272

Query: 241 YPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRP-SAQELL 297
            P    +      +     +             S  +L+   +  DP +R  +A+E+ 
Sbjct: 273 LPTRNGRYVDGLPEDDPVLK----------TYDSYGRLLRRAIDPDPRQRFTTAEEMS 320

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score =  127 bits (320), Expect = 1e-32
 Identities = 71/368 (19%), Positives = 125/368 (33%), Gaps = 83/368 (22%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
           D++E    LG G   VV +   K  G    +A K +                        
Sbjct: 33  DDFEKISELGAGNGGVVFKVSHKPSGLV--MARKLIHLEIKPA----------------- 73

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
               R Q       +  E+ V+ +        P ++  Y  +     + + +E   GG L
Sbjct: 74  ---IRNQ-------IIRELQVLHE-----CNSPYIVGFYGAFYSDGEISICMEHMDGGSL 118

Query: 130 FDRIVAQERYMEVGAAAVIRQIAEGLAALH-QANIVHRDLKPENCLFLNDREDSPLKIMD 188
              +    R  E     V   + +GL  L  +  I+HRD+KP N L +N R +  +K+ D
Sbjct: 119 DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNIL-VNSRGE--IKLCD 175

Query: 189 FGLSS--VEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIA 246
           FG+S   ++   +  VG   +  Y+SPE L     + +SD+WS+G+ L  +  G  P   
Sbjct: 176 FGVSGQLIDSMANSFVG---TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 232

Query: 247 --------------------QSNRQKQQMIMAGEFSFYEQTWKNI--------------- 271
                                  R +       +F    +    I               
Sbjct: 233 PDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKL 292

Query: 272 -----SSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAKEEEMDAEIVSRLQSFNAR 326
                S   +  ++  L  +P  R   ++L+ H ++    A+E +    + S +      
Sbjct: 293 PSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEEVDFAGWLCSTIGLNQPS 352

Query: 327 RKLRAAAI 334
               AA +
Sbjct: 353 TPTHAAGV 360

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score =  127 bits (321), Expect = 2e-32
 Identities = 65/321 (20%), Positives = 136/321 (42%), Gaps = 63/321 (19%)

Query: 2   GQETRKLT-DEYEVTDILGRGGFSVVRRGIKKTCGETNQV-AIKTLRRIGSTTPYGFPGS 59
           G+ +  L   ++++  ++GRG ++ V     K   +T+++ A++ ++             
Sbjct: 43  GKASSSLGLQDFDLLRVIGRGSYAKVLLVRLK---KTDRIYAMRVVK------------- 86

Query: 60  RGSSSSSQIGFFPTRKQVSVSDALLTNEI---LVMRKIVENVSPHPNVIDLYDVYEDQNG 116
                          K++   D     +I      + + E  S HP ++ L+  ++ ++ 
Sbjct: 87  ---------------KELVNDD----EDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESR 127

Query: 117 VHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFL 176
           +  ++E  +GG+L   +  Q +  E  A     +I+  L  LH+  I++RDLK +N L  
Sbjct: 128 LFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL- 186

Query: 177 NDREDSPLKIMDFGLSSVEGYTDPVVGLF-GSIDYVSPEALLQDRITSKSDMWSLGVILY 235
            D E   +K+ D+G+             F G+ +Y++PE L  +      D W+LGV+++
Sbjct: 187 -DSEGH-IKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMF 244

Query: 236 ILLSGYPPFIAQSNRQKQ---------QMIMAGEFSFYEQTWKNISSSAKQLISSLLTVD 286
            +++G  PF    +             Q+I+  +        +++S  A  ++ S L  D
Sbjct: 245 EMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP----RSLSVKAASVLKSFLNKD 300

Query: 287 PNRR------PSAQELLNHPW 301
           P  R          ++  HP+
Sbjct: 301 PKERLGCHPQTGFADIQGHPF 321

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score =  124 bits (313), Expect = 5e-32
 Identities = 59/243 (24%), Positives = 100/243 (41%), Gaps = 45/243 (18%)

Query: 12  YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFF 71
           Y +  ++GRGG   V             VA+K +    S+ P                 F
Sbjct: 36  YRLRRLVGRGGMGDVYEAEDTVRERI--VALKLMSETLSSDPV----------------F 77

Query: 72  PTR-KQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELF 130
            TR ++ + +   L                 P+V+ ++D  E    +++ + L +G +L 
Sbjct: 78  RTRMQREARTAGRLQ---------------EPHVVPIHDFGEIDGQLYVDMRLINGVDLA 122

Query: 131 DRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFG 190
             +  Q       A A++RQI   L A H A   HRD+KPEN L   D       ++DFG
Sbjct: 123 AMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDF---AYLVDFG 179

Query: 191 LSSVEG-----YTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFI 245
           ++S             V   G++ Y++PE   +   T ++D+++L  +LY  L+G PP+ 
Sbjct: 180 IASATTDEKLTQLGNTV---GTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQ 236

Query: 246 AQS 248
              
Sbjct: 237 GDQ 239

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score =  123 bits (311), Expect = 6e-32
 Identities = 77/336 (22%), Positives = 125/336 (37%), Gaps = 78/336 (23%)

Query: 9   TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQI 68
            + +E+   LG G F  V +   K  G     A K +                       
Sbjct: 18  NEVWEIVGELGDGAFGKVYKAKNKETGAL--AAAKVI----------------------- 52

Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
               T+ +  + D     EI ++         HP ++ L   Y     + +++E C GG 
Sbjct: 53  ---ETKSEEELED--YIVEIEILAT-----CDHPYIVKLLGAYYHDGKLWIMIEFCPGGA 102

Query: 129 LFDRIVAQERYM-EVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIM 187
           +   ++  +R + E     V RQ+ E L  LH   I+HRDLK  N L +    +  +++ 
Sbjct: 103 VDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVL-MT--LEGDIRLA 159

Query: 188 DFGLSSVEGYT----DPVVGLFGSIDY------VSPEALLQDRITSKSDMWSLGVILYIL 237
           DFG+S+    T    D  +G      Y      V  E +       K+D+WSLG+ L  +
Sbjct: 160 DFGVSAKNLKTLQKRDSFIG----TPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 215

Query: 238 LSGYPPF-----------IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVD 286
               PP            IA+S+                 T    S   +  +   L  +
Sbjct: 216 AQIEPPHHELNPMRVLLKIAKSDPPTL------------LTPSKWSVEFRDFLKIALDKN 263

Query: 287 PNRRPSAQELLNHPWVIGDSAKEEEMDAEIVSRLQS 322
           P  RPSA +LL HP+V   S    +   E+V+  ++
Sbjct: 264 PETRPSAAQLLEHPFV--SSITSNKALRELVAEAKA 297

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score =  124 bits (313), Expect = 2e-31
 Identities = 64/309 (20%), Positives = 116/309 (37%), Gaps = 75/309 (24%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
           ++  + + +GRG F  V  G  +   +   VA+K+ R                    +  
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLR--ADNTLVAVKSCRE-------------TLPPDLKAK 158

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
           F                E  ++++       HPN++ L  V   +  +++++EL  GG+ 
Sbjct: 159 FL--------------QEARILKQY-----SHPNIVRLIGVCTQKQPIYIVMELVQGGDF 199

Query: 130 FDRIVAQERYMEVGAAAVI---RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKI 186
              +  +     +    ++      A G+  L     +HRDL   NCL     E + LKI
Sbjct: 200 LTFL--RTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLV---TEKNVLKI 254

Query: 187 MDFGLSSVEG----YTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILLSGY 241
            DFG+S  E          +     + + +PEAL   R +S+SD+WS G++L+     G 
Sbjct: 255 SDFGMSREEADGVYAASGGLRQV-PVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGA 313

Query: 242 PPFIAQSNRQKQQMIMAGEF---------SFYE---QTWKNISSSAKQLISSLLTVDPNR 289
            P+   SN+Q ++ +  G           + +    Q W                 +P +
Sbjct: 314 SPYPNLSNQQTREFVEKGGRLPCPELCPDAVFRLMEQCWAY---------------EPGQ 358

Query: 290 RPSAQELLN 298
           RPS   +  
Sbjct: 359 RPSFSTIYQ 367

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score =  122 bits (308), Expect = 3e-31
 Identities = 73/344 (21%), Positives = 120/344 (34%), Gaps = 107/344 (31%)

Query: 9   TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQI 68
            D+Y++   LGRG +S V   I  T  E  +V +K L+                      
Sbjct: 35  QDDYQLVRKLGRGKYSEVFEAINITNNE--KVVVKILK---------------------- 70

Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
              P +K+          +I    KI+EN+   PN+I L D+ +D       L       
Sbjct: 71  ---PVKKK----------KIKREIKILENLRGGPNIITLADIVKDPVSRTPAL------- 110

Query: 129 LFDRIVAQERYMEVGAAAVIR------------QIAEGLAALHQANIVHRDLKPENCLFL 176
               +   E         + +            +I + L   H   I+HRD+KP N +  
Sbjct: 111 ----VF--EHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI- 163

Query: 177 NDREDSPLKIMDFGL----SSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKS-DMWSLG 231
            D E   L+++D+GL       + Y   V   +    +  PE L+  ++   S DMWSLG
Sbjct: 164 -DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRY----FKGPELLVDYQMYDYSLDMWSLG 218

Query: 232 VILYILLSGYPP-FIAQSNRQKQQMIMA-----GEFSFYE-------------------Q 266
            +L  ++    P F    N  +   I         + + +                   +
Sbjct: 219 CMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRK 278

Query: 267 TWKNISSSAKQ---------LISSLLTVDPNRRPSAQELLNHPW 301
            W+    S  Q          +  LL  D   R +A+E + HP+
Sbjct: 279 RWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 322

>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A Length = 214

 Score =  119 bits (299), Expect = 3e-31
 Identities = 27/171 (15%), Positives = 59/171 (34%), Gaps = 10/171 (5%)

Query: 350 LKNLLGSHDLNEEEIQNLRIHFRTICANG-----DNATLSEFEEVLKAMNMSSLVPLAPR 404
           L        L ++EI      F  +          +       E + ++      P   R
Sbjct: 36  LAEYQDLTFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILSLPELKANPFKER 95

Query: 405 IFDLFD-NNRDGTVDMREILCGFSSLR-KSQGDDALRLCFQMYDIDRSGCITKEEVASML 462
           I  +F  +    ++   + L   S     +  D      F+++D D  G + +E+++ ++
Sbjct: 96  ICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLV 155

Query: 463 RALPDDCLPVDITEPG---KLDEIFDLMDANNDGKVTFDEFRAAMQRDSSL 510
             L  +     ++       +D I +  D + DG +   EF+  + R    
Sbjct: 156 NCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISRSPDF 206

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score =  121 bits (306), Expect = 4e-31
 Identities = 83/344 (24%), Positives = 128/344 (37%), Gaps = 92/344 (26%)

Query: 8   LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQ 67
           L   Y     LG GG  +V   +   C +  +VAIK                       +
Sbjct: 9   LGSRYMDLKPLGCGGNGLVFSAVDNDCDK--RVAIK-----------------------K 43

Query: 68  IGFFPTRKQVSVSDALLT-NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSG 126
           I                   EI ++R++      H N++ ++++        L  ++ S 
Sbjct: 44  IVL------TDPQSVKHALREIKIIRRL-----DHDNIVKVFEILGPSGS-QLTDDVGSL 91

Query: 127 GELFDRIVAQERYMEVGAAAVIR--------------QIAEGLAALHQANIVHRDLKPEN 172
            EL    + QE YME   A V+               Q+  GL  +H AN++HRDLKP N
Sbjct: 92  TELNSVYIVQE-YMETDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPAN 150

Query: 173 CLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYV------SPEALLQDRITSKS- 225
            LF+N  ED  LKI DFGL+ +        G     + +      SP  LL     +K+ 
Sbjct: 151 -LFIN-TEDLVLKIGDFGLARIMDPHYSHKGHL--SEGLVTKWYRSPRLLLSPNNYTKAI 206

Query: 226 DMWSLGVILYILLSGYPPFIAQSNRQKQQMIM-----------------AGEF------- 261
           DMW+ G I   +L+G   F      ++ Q+I+                    +       
Sbjct: 207 DMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTE 266

Query: 262 ---SFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
                  Q    IS  A   +  +LT  P  R +A+E L+HP++
Sbjct: 267 PHKPL-TQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYM 309

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score =  121 bits (305), Expect = 1e-30
 Identities = 75/335 (22%), Positives = 125/335 (37%), Gaps = 69/335 (20%)

Query: 9   TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQI 68
              +     +G G F  V         E   VAIK                       ++
Sbjct: 53  EKLFSDLREIGHGSFGAVYFARDVRNSEV--VAIK-----------------------KM 87

Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
            +   +      D  +  E+  ++K       HPN I     Y  ++   L++E C G  
Sbjct: 88  SYSGKQSNEKWQD--IIKEVRFLQK-----LRHPNTIQYRGCYLREHTAWLVMEYCLGS- 139

Query: 129 LFDRIVAQERYM-EVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIM 187
             D +   ++ + EV  AAV     +GLA LH  N++HRD+K  N L L+  E   +K+ 
Sbjct: 140 ASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNIL-LS--EPGLVKLG 196

Query: 188 DFGLSSVEGYTDPVVGLFGSIDYVSPE---ALLQDRITSKSDMWSLGVILYILLSGYPPF 244
           DFG +S+    +  V   G+  +++PE   A+ + +   K D+WSLG+    L    PP 
Sbjct: 197 DFGSASIMAPANSFV---GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL 253

Query: 245 -----------IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSA 293
                      IAQ+                   W   S   +  + S L   P  RP++
Sbjct: 254 FNMNAMSALYHIAQNESPA----------LQSGHW---SEYFRNFVDSCLQKIPQDRPTS 300

Query: 294 QELLNHPWVIGDSAKEEEMDAEIVSRLQSFNARRK 328
           + LL H +V     +   +  +++ R +       
Sbjct: 301 EVLLKHRFV--LRERPPTVIMDLIQRTKDAVRELD 333

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score =  122 bits (307), Expect = 1e-30
 Identities = 59/393 (15%), Positives = 116/393 (29%), Gaps = 100/393 (25%)

Query: 9   TDEYEVTDILGRG--GFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSS 66
              YE+  ++G+G      V     K  GE   V ++ +                     
Sbjct: 24  GGCYELLTVIGKGFEDLMTVNLARYKPTGEY--VTVRRI--------------------- 60

Query: 67  QIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSG 126
                      +     L  E+ V +        HPN++     +   N + ++    + 
Sbjct: 61  -----NLEACSNEMVTFLQGELHVSKL-----FNHPNIVPYRATFIADNELWVVTSFMAY 110

Query: 127 GELFD--RIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPL 184
           G   D       +   E+  A +++ + + L  +H    VHR +K  + L ++   D  +
Sbjct: 111 GSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHIL-IS--VDGKV 167

Query: 185 KIMDFGLS-----------SVEGYTDPVVG-LFGSIDYVSPEALLQDRI--TSKSDMWSL 230
            +     +            V  +    V  L     ++SPE L Q+     +KSD++S+
Sbjct: 168 YLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLP----WLSPEVLQQNLQGYDAKSDIYSV 223

Query: 231 GVILYILLSGYPPF-----------IAQSN------------------------------ 249
           G+    L +G+ PF                                              
Sbjct: 224 GITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSD 283

Query: 250 -RQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAK 308
                    +   S      +  S      +   L  +P+ RPSA  LLNH +      +
Sbjct: 284 SLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKRR 343

Query: 309 EEEMDAEIVSRLQSFNARRKLRAAAIASVLSST 341
             E   E++  +         ++   + +    
Sbjct: 344 ASEALPELLRPVTPITNFEGSQSQDHSGIFGLV 376

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score =  118 bits (299), Expect = 1e-30
 Identities = 54/312 (17%), Positives = 98/312 (31%), Gaps = 79/312 (25%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
            +      L       + +G  +  G    + +K L+                 S+ +  
Sbjct: 10  KQLNFLTKLNENHSGELWKG--RWQGND--IVVKVLKV-------------RDWSTRKSR 52

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHL--ILELCSGG 127
            F               E   +R        HPNV+ +    +     H   I      G
Sbjct: 53  DF-------------NEECPRLRIF-----SHPNVLPVLGACQSPPAPHPTLITHWMPYG 94

Query: 128 ELFDRIVAQERYMEVGAAAVIR---QIAEGLAALHQAN--IVHRDLKPENCLFLNDREDS 182
            L++ +     +  V  +  ++    +A G+A LH     I    L   + + ++  ED 
Sbjct: 95  SLYNVLHEGTNF-VVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVM-ID--EDM 150

Query: 183 PLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQ---DRITSKSDMWSLGVILYILLS 239
             +I    +           G   +  +V+PEAL +   D     +DMWS  V+L+ L++
Sbjct: 151 TARISMADVKFSFQSP----GRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVT 206

Query: 240 GYPPFIAQSNRQKQQMIMAGEFSFYEQTWK------------NISSSAKQLISSLLTVDP 287
              PF               + S  E   K             IS    +L+   +  DP
Sbjct: 207 REVPF--------------ADLSNMEIGMKVALEGLRPTIPPGISPHVSKLMKICMNEDP 252

Query: 288 NRRPSAQELLNH 299
            +RP    ++  
Sbjct: 253 AKRPKFDMIVPI 264

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score =  120 bits (302), Expect = 2e-30
 Identities = 76/348 (21%), Positives = 140/348 (40%), Gaps = 83/348 (23%)

Query: 9   TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQI 68
              +E+ +++G G +  V +G     G+    AIK                         
Sbjct: 23  AGIFELVELVGNGTYGQVYKGRHVKTGQL--AAIK------------------------- 55

Query: 69  GFFPTRKQVSVS---DALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVH------L 119
                   + V+   +  +  EI +++K     S H N+   Y  +  +N         L
Sbjct: 56  -------VMDVTGDEEEEIKQEINMLKKY----SHHRNIATYYGAFIKKNPPGMDDQLWL 104

Query: 120 ILELCSGGELFD--RIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLN 177
           ++E C  G + D  +        E   A + R+I  GL+ LHQ  ++HRD+K +N L L 
Sbjct: 105 VMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVL-LT 163

Query: 178 DREDSPLKIMDFGLSSVEGYTDPVVGLF-GSIDYVSPEALLQDRIT-----SKSDMWSLG 231
             E++ +K++DFG+S+    T      F G+  +++PE +  D         KSD+WSLG
Sbjct: 164 --ENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLG 221

Query: 232 VILYILLSGYPPF-----------IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLIS 280
           +    +  G PP            I ++   + +           + W   S   +  I 
Sbjct: 222 ITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLK----------SKKW---SKKFQSFIE 268

Query: 281 SLLTVDPNRRPSAQELLNHPWVIGDSAKEEEMDAEIVSRLQSFNARRK 328
           S L  + ++RP+ ++L+ HP+ I D   E ++  ++   +     +R 
Sbjct: 269 SCLVKNHSQRPATEQLMKHPF-IRDQPNERQVRIQLKDHIDRTKKKRG 315

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score =  120 bits (303), Expect = 3e-30
 Identities = 70/352 (19%), Positives = 112/352 (31%), Gaps = 108/352 (30%)

Query: 8   LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQ 67
           +   Y V   +  G +  V         E   VAIK +    S        S        
Sbjct: 20  MQSPYTVQRFISSGSYGAV---CAGVDSEGIPVAIKRVFNTVSDGRTVNILS-------- 68

Query: 68  IGFFPTRKQVSVSDALLT-NEILVMRKIVENVSPHPNVIDLYDV-----YEDQNGVHLIL 121
                               EI ++         HPN++ L D+         + ++L+ 
Sbjct: 69  ----------DSFLCKRVLREIRLLNHF-----HHPNILGLRDIFVHFEEPAMHKLYLVT 113

Query: 122 ELCSGGELFDRIVAQERYMEVGAAAVIR----------------QIAEGLAALHQANIVH 165
           EL                M    A VI                  I  GL  LH+A +VH
Sbjct: 114 EL----------------MRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVH 157

Query: 166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYV------SPEALLQD 219
           RDL P N L L   +++ + I DF L+  +              YV      +PE ++Q 
Sbjct: 158 RDLHPGNIL-LA--DNNDITICDFNLAREDTADAN------KTHYVTHRWYRAPELVMQF 208

Query: 220 RITSKS-DMWSLGVILYILLSGYPPF-----IAQ-------------------SNRQKQQ 254
           +  +K  DMWS G ++  + +    F       Q                   S+   + 
Sbjct: 209 KGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARD 268

Query: 255 MIMAGEFSFYEQTWKNI----SSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
            +     +   + W  +       A  LI+ +L  +P RR S ++ L HP+ 
Sbjct: 269 YLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYF 320

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score =  121 bits (306), Expect = 3e-30
 Identities = 74/338 (21%), Positives = 116/338 (34%), Gaps = 90/338 (26%)

Query: 6   RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQ-VAIKTLRRIGSTTPYGFPGSRGSSS 64
           R     Y  T ++G G F VV    +    ++ + VAIK + +                 
Sbjct: 50  RPQEVSYTDTKVIGNGSFGVV---YQAKLCDSGELVAIKKVLQ----------------- 89

Query: 65  SSQIGFFPTRKQVSVSDALLTN-EILVMRKIVENVSPHPNVIDLYDVY------EDQNGV 117
                           D    N E+ +MRK+      H N++ L   +      +D+  +
Sbjct: 90  ----------------DKRFKNRELQIMRKL-----DHCNIVRLRYFFYSSGEKKDEVYL 128

Query: 118 HLILELCSGGELFDRIVAQERYMEVGAAAVIR----QIAEGLAALHQANIVHRDLKPENC 173
           +L+L+      ++       R  +      ++    Q+   LA +H   I HRD+KP+N 
Sbjct: 129 NLVLDYV-PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNL 187

Query: 174 LFLNDREDSPLKIMDFGL----SSVEGYTDPVVGLFGSIDYVSPEALLQDRI-TSKSDMW 228
           L   D + + LK+ DFG        E     +   +    Y +PE +      TS  D+W
Sbjct: 188 LL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY----YRAPELIFGATDYTSSIDVW 241

Query: 229 SLGVILYILLSGYPPFIAQSNRQKQQMIM-----------------AGEFSF---YEQTW 268
           S G +L  LL G P F   S   +   I+                   EF F       W
Sbjct: 242 SAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPW 301

Query: 269 -----KNISSSAKQLISSLLTVDPNRRPSAQELLNHPW 301
                      A  L S LL   P  R +  E   H +
Sbjct: 302 TKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 339

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score =  118 bits (298), Expect = 3e-30
 Identities = 73/315 (23%), Positives = 121/315 (38%), Gaps = 77/315 (24%)

Query: 9   TDEYEV-------TDILGRGGFSVVRRGI-KKTCGETNQVAIKTLRRIGSTTPYGFPGSR 60
             +Y +         ILG G F  V  G+     GE   VA+KT ++             
Sbjct: 4   GPQYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKK------------- 50

Query: 61  GSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLI 120
             +  ++  F               +E ++M+ +      HP+++ L  + E++    +I
Sbjct: 51  DCTLDNKEKFM--------------SEAVIMKNL-----DHPHIVKLIGIIEEEP-TWII 90

Query: 121 LELCSGGELFDRIVAQERYMEVGA-AAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDR 179
           +EL   GEL   +   +  ++V        QI + +A L   N VHRD+   N L +   
Sbjct: 91  MELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNIL-VA-- 147

Query: 180 EDSPLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYI 236
               +K+ DFGLS     E Y    V     I ++SPE++   R T+ SD+W   V ++ 
Sbjct: 148 SPECVKLGDFGLSRYIEDEDYYKASVTRL-PIKWMSPESINFRRFTTASDVWMFAVCMWE 206

Query: 237 LLS-GYPPFIAQSNRQKQQMIMAGEF---------SFYE---QTWKNISSSAKQLISSLL 283
           +LS G  PF    N+    ++  G+            Y    + W               
Sbjct: 207 ILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDY------------- 253

Query: 284 TVDPNRRPSAQELLN 298
             DP+ RP   EL+ 
Sbjct: 254 --DPSDRPRFTELVC 266

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score =  120 bits (304), Expect = 5e-30
 Identities = 80/364 (21%), Positives = 131/364 (35%), Gaps = 103/364 (28%)

Query: 8   LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQ 67
           +   YEV  ++G+G F  V +       +   VA+K +R   +   +             
Sbjct: 95  VAYRYEVLKVIGKGSFGQVVKAYDHKVHQ--HVALKMVR---NEKRF------------- 136

Query: 68  IGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHP-NVIDLYDVYEDQNGVHLIL--ELC 124
                  +Q     A    EI ++  + +    +  NVI + + +  +N  H+ +  EL 
Sbjct: 137 ------HRQ-----AAE--EIRILEHLRKQDKDNTMNVIHMLENFTFRN--HICMTFELL 181

Query: 125 SGGELFDRIVA-QERYMEVGAAAVI-RQIAEGLAALHQANIVHRDLKPENCLFLNDREDS 182
           S   L++ I   + +   +         I + L ALH+  I+H DLKPEN L L  +  S
Sbjct: 182 SM-NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENIL-LKQQGRS 239

Query: 183 PLKIMDFGLSSVEG---YTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS 239
            +K++DFG S  E    YT  +   F    Y +PE +L  R     DMWSLG IL  LL+
Sbjct: 240 GIKVIDFGSSCYEHQRVYTY-IQSRF----YRAPEVILGARYGMPIDMWSLGCILAELLT 294

Query: 240 GYPPFIAQSNRQ------------KQQMIMAGEFS--FYEQT-------------WKNIS 272
           GYP    +                 Q+++ A + +  F                    + 
Sbjct: 295 GYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVL 354

Query: 273 SSAKQ----------------------------LISSLLTVDPNRRPSAQELLNHPWVIG 304
           +  +                              +   L  DP  R +  + L HPW+  
Sbjct: 355 NGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRR 414

Query: 305 DSAK 308
              K
Sbjct: 415 RLPK 418

>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A Length = 208

 Score =  115 bits (290), Expect = 6e-30
 Identities = 32/186 (17%), Positives = 72/186 (38%), Gaps = 20/186 (10%)

Query: 350 LKNLLGSHDLNEEEIQNLRIHFRTICANGDNATLSEFEEVLKAMNMSSLVPLAPRIFDLF 409
           L+ +      +  +I  L   F ++    +  TLS  +   + +   ++ PL  RI + F
Sbjct: 14  LEEIKKETGFSHSQITRLYSRFTSLDKGEN-GTLSRED--FQRIPELAINPLGDRIINAF 70

Query: 410 DNNRDGTVDMREILCGFSSLRKSQG----------------DDALRLCFQMYDIDRSGCI 453
            +  +  V+ R  +   +  R  +                  + L   F++YD+D+   I
Sbjct: 71  FSEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDKI 130

Query: 454 TKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDSSLQDV 513
           +++E+  +LR +    +  +       D      D + D  ++F EF   +++    Q +
Sbjct: 131 SRDELLQVLRMMVGVNISDEQLGS-IADRTIQEADQDGDSAISFTEFVKVLEKVDVEQKM 189

Query: 514 VLSSLR 519
            +  L 
Sbjct: 190 SIRFLH 195

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score =  117 bits (296), Expect = 2e-29
 Identities = 75/321 (23%), Positives = 122/321 (38%), Gaps = 78/321 (24%)

Query: 3   QETRKLTDEYEVT--DILGRGGFSVVRRGIKKTCGETNQ--VAIKTLRRIGSTTPYGFPG 58
           Q   ++  E E     +LG G F  V +G+    GE  +  VAIK LR            
Sbjct: 6   QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE----------- 54

Query: 59  SRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVH 118
              +S  +                   +E  VM  +      +P+V  L  +      V 
Sbjct: 55  --ATSPKANKEI--------------LDEAYVMASV-----DNPHVCRLLGICLTST-VQ 92

Query: 119 LILELCSGGELFDRIVAQERYMEVGAAAVI---RQIAEGLAALHQANIVHRDLKPENCLF 175
           LI +L   G L D +  +E    +G+  ++    QIA+G+  L    +VHRDL   N L 
Sbjct: 93  LITQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVL- 149

Query: 176 LNDREDSPLKIMDFGLSSV----EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLG 231
           +       +KI DFGL+ +    E       G    I +++ E++L    T +SD+WS G
Sbjct: 150 VK--TPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYG 206

Query: 232 VILYILLS-GYPPFIAQSNRQKQQMIMAGE---------FSFYE---QTWKNISSSAKQL 278
           V ++ L++ G  P+      +   ++  GE            Y    + W          
Sbjct: 207 VTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKCWM--------- 257

Query: 279 ISSLLTVDPNRRPSAQELLNH 299
                 +D + RP  +EL+  
Sbjct: 258 ------IDADSRPKFRELIIE 272

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score =  116 bits (293), Expect = 2e-29
 Identities = 79/315 (25%), Positives = 119/315 (37%), Gaps = 77/315 (24%)

Query: 9   TDEYEV-------TDILGRGGFSVVRRGI-KKTCGETNQVAIKTLRRIGSTTPYGFPGSR 60
           T +YE+          +G G F  V +GI          VAIKT +              
Sbjct: 7   TRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN------------- 53

Query: 61  GSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLI 120
            +S S +  F                E L MR+       HP+++ L  V  +   V +I
Sbjct: 54  CTSDSVREKFL--------------QEALTMRQF-----DHPHIVKLIGVITENP-VWII 93

Query: 121 LELCSGGELFDRIVAQERYMEVGA-AAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDR 179
           +ELC+ GEL   +  ++  +++ +      Q++  LA L     VHRD+   N L     
Sbjct: 94  MELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV---S 150

Query: 180 EDSPLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYI 236
            +  +K+ DFGLS       Y     G    I +++PE++   R TS SD+W  GV ++ 
Sbjct: 151 SNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESINFRRFTSASDVWMFGVCMWE 209

Query: 237 LLS-GYPPFIAQSNRQKQQMIMAGE---------FSFYE---QTWKNISSSAKQLISSLL 283
           +L  G  PF    N      I  GE          + Y    + W               
Sbjct: 210 ILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAY------------- 256

Query: 284 TVDPNRRPSAQELLN 298
             DP+RRP   EL  
Sbjct: 257 --DPSRRPRFTELKA 269

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score =  118 bits (298), Expect = 2e-29
 Identities = 72/384 (18%), Positives = 125/384 (32%), Gaps = 123/384 (32%)

Query: 8   LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQ 67
           +   Y+    +G G   +V             VAIK L R                    
Sbjct: 23  VLKRYQNLKPIGSGAQGIVCAAYDAILER--NVAIKKLSRPFQ----------------- 63

Query: 68  IGFFPTRKQVSVSDALLT-NEILVMRKIVENVSPHPNVIDLYDV------YEDQNGVHLI 120
                     + + A     E+++M+ +      H N+I L +V       E+   V+++
Sbjct: 64  ----------NQTHAKRAYRELVLMKCV-----NHKNIIGLLNVFTPQKSLEEFQDVYIV 108

Query: 121 LELCSGGELFDRIVAQERYMEVGAAAVIR-------------QIAEGLAALHQANIVHRD 167
           +EL                M+     VI+             Q+  G+  LH A I+HRD
Sbjct: 109 MEL----------------MDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 152

Query: 168 LKPENCLFLNDREDSPLKIMDFGLS----SVEGYTDPVVGLFGSIDYVSPEALLQDRITS 223
           LKP N + +    D  LKI+DFGL+    +    T  VV  +    Y +PE +L      
Sbjct: 153 LKPSN-IVVK--SDCTLKILDFGLARTAGTSFMMTPYVVTRY----YRAPEVILGMGYKE 205

Query: 224 KSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMA--GEFSFYEQTWKNISSSAKQLISS 281
             D+WS+G I+  ++ G   F    +  +   ++   G      +  K +  + +  + +
Sbjct: 206 NVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPC--PEFMKKLQPTVRTYVEN 263

Query: 282 L--------------------------------------LTVDPNRRPSAQELLNHPWVI 303
                                                  L +D ++R S  E L HP++ 
Sbjct: 264 RPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 323

Query: 304 GDSAKEEEMDAEIVSRLQSFNARR 327
                 E          +  + R 
Sbjct: 324 VWYDPSEAEAPPPKIPDKQLDERE 347

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score =  115 bits (291), Expect = 2e-29
 Identities = 74/302 (24%), Positives = 120/302 (39%), Gaps = 77/302 (25%)

Query: 16  DILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRK 75
             +G G F +V  G        ++VAIKT+R  G+ +                       
Sbjct: 14  QEIGSGQFGLVHLGYWLN---KDKVAIKTIRE-GAMSE---------------------- 47

Query: 76  QVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA 135
                +  +  E  VM K+      HP ++ LY V  +Q  + L+ E    G L D +  
Sbjct: 48  -----EDFIE-EAEVMMKL-----SHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYL-- 94

Query: 136 QERYMEVGAAAVI---RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS 192
           + +     A  ++     + EG+A L +A ++HRDL   NCL     E+  +K+ DFG++
Sbjct: 95  RTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV---GENQVIKVSDFGMT 151

Query: 193 SV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQS 248
                + YT      F  + + SPE     R +SKSD+WS GV+++ + S G  P+  +S
Sbjct: 152 RFVLDDQYTSSTGTKF-PVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS 210

Query: 249 NRQKQQMIMAGE---------FSFYE---QTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
           N +  + I  G             Y+     W+                 P  RP+   L
Sbjct: 211 NSEVVEDISTGFRLYKPRLASTHVYQIMNHCWRE---------------RPEDRPAFSRL 255

Query: 297 LN 298
           L 
Sbjct: 256 LR 257

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score =  116 bits (292), Expect = 2e-29
 Identities = 63/250 (25%), Positives = 106/250 (42%), Gaps = 44/250 (17%)

Query: 18  LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQV 77
           LG G F  VR+G+ +   +   VAIK L+             +G+  +            
Sbjct: 18  LGCGNFGSVRQGVYRMRKKQIDVAIKVLK-------------QGTEKADTEEMM------ 58

Query: 78  SVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE 137
                    E  +M ++      +P ++ L  V + +  + L++E+  GG L   +V + 
Sbjct: 59  --------REAQIMHQLD-----NPYIVRLIGVCQAEA-LMLVMEMAGGGPLHKFLVGKR 104

Query: 138 RYMEVGA-AAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV-- 194
             + V   A ++ Q++ G+  L + N VHRDL   N L L        KI DFGLS    
Sbjct: 105 EEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVL-LV--NRHYAKISDFGLSKALG 161

Query: 195 ---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNR 250
                YT    G +  + + +PE +   + +S+SD+WS GV ++  LS G  P+      
Sbjct: 162 ADDSYYTARSAGKW-PLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP 220

Query: 251 QKQQMIMAGE 260
           +    I  G+
Sbjct: 221 EVMAFIEQGK 230

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score =  117 bits (294), Expect = 3e-29
 Identities = 62/309 (20%), Positives = 109/309 (35%), Gaps = 71/309 (22%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETN-QVAIKTLRRIGSTTPYGFPGSRGSSSSSQI 68
               +  I+G G    V  G  +  G+ +  VAIK L+              G +   + 
Sbjct: 49  SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKA-------------GYTERQRR 95

Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
            F               +E  +M +       HPN+I L  V        ++ E    G 
Sbjct: 96  DFL--------------SEASIMGQFD-----HPNIIRLEGVVTRGRLAMIVTEYMENGS 136

Query: 129 LFDRIVAQERYMEVGA-AAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIM 187
           L   +   +    +     ++R +  G+  L     VHRDL   N L ++   +   K+ 
Sbjct: 137 LDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVL-VD--SNLVCKVS 193

Query: 188 DFGLS-----SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GY 241
           DFGLS       +       G    I + +PEA+     +S SD+WS GV+++ +L+ G 
Sbjct: 194 DFGLSRVLEDDPDAAYTTTGGKI-PIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGE 252

Query: 242 PPFIAQSNRQKQQMIMAGE---------FSFYE---QTWKNISSSAKQLISSLLTVDPNR 289
            P+   +NR     +  G           + ++     W                 D  +
Sbjct: 253 RPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQLMLDCWHK---------------DRAQ 297

Query: 290 RPSAQELLN 298
           RP   ++++
Sbjct: 298 RPRFSQIVS 306

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score =  117 bits (295), Expect = 3e-29
 Identities = 78/376 (20%), Positives = 135/376 (35%), Gaps = 115/376 (30%)

Query: 1   MGQETR-KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGS 59
           M +     ++ ++++  +LG G + VV     K  GE   VAIK +              
Sbjct: 1   MPKRIVYNISSDFQLKSLLGEGAYGVVCSATHKPTGE--IVAIKKIEPFDKPL------- 51

Query: 60  RGSSSSSQIGFFPTRKQVSVSDALLT-NEILVMRKIVENVSPHPNVIDLYDV-----YED 113
                                 AL T  EI +++        H N+I ++++     +E+
Sbjct: 52  ---------------------FALRTLREIKILKHF-----KHENIITIFNIQRPDSFEN 85

Query: 114 QNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIR--------------QIAEGLAALH 159
            N V++I EL                M+     VI               Q    +  LH
Sbjct: 86  FNEVYIIQEL----------------MQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLH 129

Query: 160 QANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSI-----DYVS-- 212
            +N++HRDLKP N L +N   +  LK+ DFGL+ +   +               ++V+  
Sbjct: 130 GSNVIHRDLKPSNLL-IN--SNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATR 186

Query: 213 ----PEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMA------GEF 261
               PE +L     S++ D+WS G IL  L    P F  +  R +  +I         + 
Sbjct: 187 WYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDN 246

Query: 262 SFY----------------------EQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH 299
                                    E+ +  ++     L+  +L  DP +R +A+E L H
Sbjct: 247 DLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306

Query: 300 PWVIGDSAKEEEMDAE 315
           P++       +E + E
Sbjct: 307 PYLQTYHDPNDEPEGE 322

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score =  115 bits (291), Expect = 3e-29
 Identities = 78/340 (22%), Positives = 131/340 (38%), Gaps = 85/340 (25%)

Query: 9   TDEYEV-------TDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRG 61
            D++E+          LG G +  V  G+ K    +  VA+KTL+   +           
Sbjct: 5   YDKWEMERTDITMKHKLGGGQYGEVYEGVWK--KYSLTVAVKTLKE-DTMEV-------- 53

Query: 62  SSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLIL 121
                              +  L  E  VM++I      HPN++ L  V   +   ++I 
Sbjct: 54  -------------------EEFL-KEAAVMKEI-----KHPNLVQLLGVCTREPPFYIIT 88

Query: 122 ELCSGGELFDRIVAQERYMEVGAAAVI---RQIAEGLAALHQANIVHRDLKPENCLFLND 178
           E  + G L D +    R  EV A  ++    QI+  +  L + N +HRDL   NCL    
Sbjct: 89  EFMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV--- 144

Query: 179 REDSPLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY 235
            E+  +K+ DFGLS +   + YT      F  I + +PE+L  ++ + KSD+W+ GV+L+
Sbjct: 145 GENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLW 203

Query: 236 ILLS-GYPPFIAQSNRQKQQMIMAGE---------FSFYE---QTWKNISSSAKQLISSL 282
            + + G  P+      Q  +++                YE     W+             
Sbjct: 204 EIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW------------ 251

Query: 283 LTVDPNRRPSAQELLNHPWVIGDSAKEEEMDAEIVSRLQS 322
              +P+ RPS  E+           +E  +  E+   L  
Sbjct: 252 ---NPSDRPSFAEIH---QAFETMFQESSISDEVEKELGK 285

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score =  117 bits (294), Expect = 5e-29
 Identities = 77/364 (21%), Positives = 132/364 (36%), Gaps = 104/364 (28%)

Query: 12  YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFF 71
           Y +   LG G FS V             VA+K +R       Y                 
Sbjct: 21  YILVRKLGWGHFSTVWLAKDMVNNT--HVAMKIVR---GDKVY----------------- 58

Query: 72  PTRKQVSVSDALLTNEILVMRKIVENVSPHP------NVIDLYD--VYEDQNGVHLIL-- 121
              +      A    EI +++++ +  +         +++ L D   ++  NGVH+++  
Sbjct: 59  --TEA-----AED--EIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVF 109

Query: 122 ELCSGGELFDRIVAQERYMEVG-----AAAVIRQIAEGLAALH-QANIVHRDLKPENCLF 175
           E+  G  L   I   ++Y   G        + +Q+  GL  +H +  I+H D+KPEN L 
Sbjct: 110 EVL-GENLLALI---KKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLM 165

Query: 176 ---LNDREDSPLKIMDFGLSSVEG--YTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSL 230
               +      +KI D G +      YT+ +        Y SPE LL       +D+WS 
Sbjct: 166 EIVDSPENLIQIKIADLGNACWYDEHYTNSIQTRE----YRSPEVLLGAPWGCGADIWST 221

Query: 231 GVILYILLSGYPPFIAQSNRQK------------------QQMIMAGEFS--FYEQ--TW 268
             +++ L++G   F                            ++  G+++  F+      
Sbjct: 222 ACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLL 281

Query: 269 KNISSS-------------------AKQ---LISSLLTVDPNRRPSAQELLNHPWVIGDS 306
           +NIS                     AK+    +S +L +DP +R  A  L+NHPW+    
Sbjct: 282 RNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTL 341

Query: 307 AKEE 310
             EE
Sbjct: 342 GMEE 345

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score =  114 bits (288), Expect = 7e-29
 Identities = 69/316 (21%), Positives = 115/316 (36%), Gaps = 84/316 (26%)

Query: 10  DEYEV-------TDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGS 62
             +E+          LG G F VV+ G  +       VAIK ++                
Sbjct: 17  GSWEIDPKDLTFLKELGTGQFGVVKYGKWRG---QYDVAIKMIK---------------E 58

Query: 63  SSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILE 122
            S S+  F                E  VM  +      H  ++ LY V   Q  + +I E
Sbjct: 59  GSMSEDEFI--------------EEAKVMMNL-----SHEKLVQLYGVCTKQRPIFIITE 99

Query: 123 LCSGGELFDRIVAQERYMEVGAAAVI---RQIAEGLAALHQANIVHRDLKPENCLFLNDR 179
             + G L + +  +E         ++   + + E +  L     +HRDL   NCL     
Sbjct: 100 YMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV---N 154

Query: 180 EDSPLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYI 236
           +   +K+ DFGLS     + YT  V   F  + +  PE L+  + +SKSD+W+ GV+++ 
Sbjct: 155 DQGVVKVSDFGLSRYVLDDEYTSSVGSKF-PVRWSPPEVLMYSKFSSKSDIWAFGVLMWE 213

Query: 237 LLS-GYPPFIAQSNRQKQQMIMAGE---------FSFYE---QTWKNISSSAKQLISSLL 283
           + S G  P+   +N +  + I  G             Y      W               
Sbjct: 214 IYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHE------------- 260

Query: 284 TVDPNRRPSAQELLNH 299
               + RP+ + LL++
Sbjct: 261 --KADERPTFKILLSN 274

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score =  113 bits (285), Expect = 1e-28
 Identities = 66/308 (21%), Positives = 118/308 (38%), Gaps = 77/308 (25%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
           +E  +   LG G F VV+ G  K       VA+K ++  GS +                 
Sbjct: 8   EEITLLKELGSGQFGVVKLGKWKG---QYDVAVKMIKE-GSMSE---------------- 47

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
                      D     E   M K+      HP ++  Y V   +  ++++ E  S G L
Sbjct: 48  -----------DEFF-QEAQTMMKL-----SHPKLVKFYGVCSKEYPIYIVTEYISNGCL 90

Query: 130 FDRIVAQERYMEVGAAAVI---RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKI 186
            + +  +     +  + ++     + EG+A L     +HRDL   NCL      D  +K+
Sbjct: 91  LNYL--RSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLV---DRDLCVKV 145

Query: 187 MDFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYP 242
            DFG++     + Y   V   F  + + +PE     + +SKSD+W+ G++++ + S G  
Sbjct: 146 SDFGMTRYVLDDQYVSSVGTKF-PVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKM 204

Query: 243 PFIAQSNRQKQQMIMAGE---------FSFYE---QTWKNISSSAKQLISSLLTVDPNRR 290
           P+   +N +    +  G           + Y+     W                  P +R
Sbjct: 205 PYDLYTNSEVVLKVSQGHRLYRPHLASDTIYQIMYSCWHE---------------LPEKR 249

Query: 291 PSAQELLN 298
           P+ Q+LL+
Sbjct: 250 PTFQQLLS 257

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score =  115 bits (290), Expect = 2e-28
 Identities = 71/348 (20%), Positives = 125/348 (35%), Gaps = 106/348 (30%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
            +YE    +G+G F  V +   +  G+   VA+K +         GFP            
Sbjct: 17  SKYEKLAKIGQGTFGEVFKARHRKTGQK--VALKKVLM--ENEKEGFP------------ 60

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDV--------YEDQNGVHLIL 121
                       AL   EI +++ +      H NV++L ++           +  ++L+ 
Sbjct: 61  ----------ITAL--REIKILQLL-----KHENVVNLIEICRTKASPYNRCKGSIYLVF 103

Query: 122 ELC---------SGGELFDRIVAQER-YMEVGAAAVIRQIAEGLAALHQANIVHRDLKPE 171
           + C         +    F   +++ +  M        + +  GL  +H+  I+HRD+K  
Sbjct: 104 DFCEHDLAGLLSNVLVKFT--LSEIKRVM--------QMLLNGLYYIHRNKILHRDMKAA 153

Query: 172 NCLFLNDREDSPLKIMDFGL---------SSVEGYTDPVVGLFGSIDYVSPEALLQDRIT 222
           N L   D     LK+ DFGL         S    YT+ VV L+    Y  PE LL +R  
Sbjct: 154 NVLITRDGV---LKLADFGLARAFSLAKNSQPNRYTNRVVTLW----YRPPELLLGERDY 206

Query: 223 SKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMI-------------------MAGEFS 262
               D+W  G I+  + +  P     + + +  +I                   +  +  
Sbjct: 207 GPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLE 266

Query: 263 FYEQTWKNI---------SSSAKQLISSLLTVDPNRRPSAQELLNHPW 301
             +   + +            A  LI  LL +DP +R  + + LNH +
Sbjct: 267 LVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDF 314

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score =  113 bits (285), Expect = 2e-28
 Identities = 59/250 (23%), Positives = 102/250 (40%), Gaps = 42/250 (16%)

Query: 17  ILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQ 76
            LG G F  V++G  +       VA+K L+   +  P                       
Sbjct: 24  ELGSGNFGTVKKGYYQMKKVVKTVAVKILKN-EANDP----------------------- 59

Query: 77  VSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ 136
            ++ D LL  E  VM+++      +P ++ +  + E +    L++E+   G L   +   
Sbjct: 60  -ALKDELLA-EANVMQQLD-----NPYIVRMIGICEAE-SWMLVMEMAELGPLNKYLQQN 111

Query: 137 ERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV-- 194
               +     ++ Q++ G+  L ++N VHRDL   N L          KI DFGLS    
Sbjct: 112 RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL---VTQHYAKISDFGLSKALR 168

Query: 195 ---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNR 250
                Y     G +  + + +PE +   + +SKSD+WS GV+++   S G  P+      
Sbjct: 169 ADENYYKAQTHGKW-PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS 227

Query: 251 QKQQMIMAGE 260
           +   M+  GE
Sbjct: 228 EVTAMLEKGE 237

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score =  115 bits (289), Expect = 2e-28
 Identities = 79/351 (22%), Positives = 127/351 (36%), Gaps = 114/351 (32%)

Query: 8   LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQ 67
           +   Y     +G G + +V            +VAIK +      T               
Sbjct: 25  VGPRYTNLSYIGEGAYGMVCSAYDNLNKV--RVAIKKISPFEHQT--------------- 67

Query: 68  IGFFPTRKQVSVSDALLT-NEILVMRKIVENVSPHPNVIDLYDV-----YEDQNGVHLIL 121
                            T  EI ++ +       H N+I + D+      E    V+++ 
Sbjct: 68  -------------YCQRTLREIKILLRF-----RHENIIGINDIIRAPTIEQMKDVYIVQ 109

Query: 122 ELCSGGELFDRIVAQERYMEVGAAAVIR--------------QIAEGLAALHQANIVHRD 167
           +L                ME     +++              QI  GL  +H AN++HRD
Sbjct: 110 DL----------------METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRD 153

Query: 168 LKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSI-DYVS------PEALLQDR 220
           LKP N L LN      LKI DFGL+ V    DP     G + +YV+      PE +L  +
Sbjct: 154 LKPSNLL-LN--TTCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIMLNSK 207

Query: 221 ITSKS-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIM------------------AGEF 261
             +KS D+WS+G IL  +LS  P F  +    +   I+                  A  +
Sbjct: 208 GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNY 267

Query: 262 ----------SFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
                      +  + + N  S A  L+  +LT +P++R   ++ L HP++
Sbjct: 268 LLSLPHKNKVPW-NRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score =  114 bits (287), Expect = 2e-28
 Identities = 72/310 (23%), Positives = 118/310 (38%), Gaps = 72/310 (23%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQ--VAIKTLRRIGSTTPYGFPGSRGSSSSSQ 67
                  ++G G F  V +G+ KT     +  VAIKTL+              G +   +
Sbjct: 44  SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKA-------------GYTEKQR 90

Query: 68  IGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGG 127
           + F                E  +M +       H N+I L  V      + +I E    G
Sbjct: 91  VDFL--------------GEAGIMGQF-----SHHNIIRLEGVISKYKPMMIITEYMENG 131

Query: 128 ELFDRIVAQERYMEVGA-AAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKI 186
            L   +  ++    V     ++R IA G+  L   N VHRDL   N L +N   +   K+
Sbjct: 132 ALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNIL-VN--SNLVCKV 188

Query: 187 MDFGLS-----SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-G 240
            DFGLS       E       G    I + +PEA+   + TS SD+WS G++++ +++ G
Sbjct: 189 SDFGLSRVLEDDPEATYTTSGGKI-PIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYG 247

Query: 241 YPPFIAQSNRQKQQMIMAGE---------FSFYE---QTWKNISSSAKQLISSLLTVDPN 288
             P+   SN +  + I  G           + Y+   Q W+                +  
Sbjct: 248 ERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQ---------------ERA 292

Query: 289 RRPSAQELLN 298
           RRP   ++++
Sbjct: 293 RRPKFADIVS 302

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score =  117 bits (294), Expect = 3e-28
 Identities = 75/332 (22%), Positives = 127/332 (38%), Gaps = 78/332 (23%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
            +  +   LG G +  V  G+ K    +  VA+KTL+                 +     
Sbjct: 220 TDITMKHKLGGGQYGEVYEGVWK--KYSLTVAVKTLK---------------EDTMEVEE 262

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
           F                E  VM++I      HPN++ L  V   +   ++I E  + G L
Sbjct: 263 FL--------------KEAAVMKEI-----KHPNLVQLLGVCTREPPFYIITEFMTYGNL 303

Query: 130 FDRIVAQERYMEVGAAAVI---RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKI 186
            D +    R  EV A  ++    QI+  +  L + N +HR+L   NCL     E+  +K+
Sbjct: 304 LDYLRECNR-QEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLV---GENHLVKV 359

Query: 187 MDFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYP 242
            DFGLS +   + YT      F  I + +PE+L  ++ + KSD+W+ GV+L+ + + G  
Sbjct: 360 ADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS 418

Query: 243 PFIAQSNRQKQQMIMAGEF---------SFYE---QTWKNISSSAKQLISSLLTVDPNRR 290
           P+      Q  +++                YE     W+                +P+ R
Sbjct: 419 PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW---------------NPSDR 463

Query: 291 PSAQELLNHPWVIGDSAKEEEMDAEIVSRLQS 322
           PS  E+           +E  +  E+   L  
Sbjct: 464 PSFAEIH---QAFETMFQESSISDEVEKELGK 492

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score =  114 bits (287), Expect = 3e-28
 Identities = 82/346 (23%), Positives = 128/346 (36%), Gaps = 109/346 (31%)

Query: 8   LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQ 67
           L   Y     +G G +  V   I K  GE  +VAIK L R                    
Sbjct: 22  LPKTYVSPTHVGSGAYGSVCSAIDKRSGE--KVAIKKLSRP------------------- 60

Query: 68  IGFFPTRKQVSVSDALLT-NEILVMRKIVENVSPHPNVIDLYDV------YEDQNGVHLI 120
             F       S   A     E+L+++ +      H NVI L DV        +    +L+
Sbjct: 61  --FQ------SEIFAKRAYRELLLLKHM-----QHENVIGLLDVFTPASSLRNFYDFYLV 107

Query: 121 LELCSGGELFDRIVAQERYMEVGAAAVIR-------------QIAEGLAALHQANIVHRD 167
           +                  M+     ++              Q+ +GL  +H A +VHRD
Sbjct: 108 MPF----------------MQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRD 151

Query: 168 LKPENCLFLNDREDSPLKIMDFGL--SSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKS 225
           LKP N L +N  ED  LKI+DFGL   +    T  VV  +    Y +PE +L     +++
Sbjct: 152 LKPGN-LAVN--EDCELKILDFGLARHADAEMTGYVVTRW----YRAPEVILSWMHYNQT 204

Query: 226 -DMWSLGVILYILLSGYPPFIAQSNRQKQQMIM------------------AGEF----- 261
            D+WS+G I+  +L+G   F  +    +   I+                  A  +     
Sbjct: 205 VDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLP 264

Query: 262 -----SFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
                 F  Q +   S  A  L+  +L +D ++R +A + L HP+ 
Sbjct: 265 QTPRKDF-TQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF 309

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score =  117 bits (294), Expect = 4e-28
 Identities = 62/250 (24%), Positives = 106/250 (42%), Gaps = 44/250 (17%)

Query: 18  LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQV 77
           LG G F  VR+G+ +   +   VAIK L++             G+  +            
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQ-------------GTEKADTEEMM------ 384

Query: 78  SVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE 137
                    E  +M ++      +P ++ L  V + +  + L++E+  GG L   +V + 
Sbjct: 385 --------REAQIMHQLD-----NPYIVRLIGVCQAEA-LMLVMEMAGGGPLHKFLVGKR 430

Query: 138 RYMEVGA-AAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSV-- 194
             + V   A ++ Q++ G+  L + N VHR+L   N L L        KI DFGLS    
Sbjct: 431 EEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVL-LV--NRHYAKISDFGLSKALG 487

Query: 195 ---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNR 250
                YT    G +  + + +PE +   + +S+SD+WS GV ++  LS G  P+      
Sbjct: 488 ADDSYYTARSAGKW-PLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP 546

Query: 251 QKQQMIMAGE 260
           +    I  G+
Sbjct: 547 EVMAFIEQGK 556

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score =  113 bits (286), Expect = 5e-28
 Identities = 83/333 (24%), Positives = 139/333 (41%), Gaps = 82/333 (24%)

Query: 8   LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQ 67
           + + Y+    +G G +  V        G   +VA+K L R                    
Sbjct: 27  VPERYQNLSPVGSGAYGSVCAAFDTKTGL--RVAVKKLSRP------------------- 65

Query: 68  IGFFPTRKQVSVSDALLT-NEILVMRKIVENVSPHPNVIDLYDV------YEDQNGVHLI 120
             F       S+  A  T  E+ +++ +      H NVI L DV       E+ N V+L+
Sbjct: 66  --FQ------SIIHAKRTYRELRLLKHM-----KHENVIGLLDVFTPARSLEEFNDVYLV 112

Query: 121 LELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRE 180
             L  G +L + IV  ++  +     +I QI  GL  +H A+I+HRDLKP N L +N  E
Sbjct: 113 THLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN-LAVN--E 167

Query: 181 DSPLKIMDFGL--SSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKS-DMWSLGVILYIL 237
           D  LKI+DFGL   + +  T  V   +    Y +PE +L     +++ D+WS+G I+  L
Sbjct: 168 DCELKILDFGLARHTADEMTGYVATRW----YRAPEIMLNWMHYNQTVDIWSVGCIMAEL 223

Query: 238 LSGYPPFIAQSNRQKQQMIM------------------AGEF----------SFYEQTWK 269
           L+G   F    +  + ++I+                  A  +          +F    + 
Sbjct: 224 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNF-ANVFI 282

Query: 270 NISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
             +  A  L+  +L +D ++R +A + L H + 
Sbjct: 283 GANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score =  113 bits (285), Expect = 8e-28
 Identities = 72/309 (23%), Positives = 113/309 (36%), Gaps = 71/309 (22%)

Query: 10  DEYEVTDILGRGGFSVVRRGI-KKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQI 68
               +  ++G G F  V  G  K    +   VAIKTL+              G +   + 
Sbjct: 45  TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKV-------------GYTEKQRR 91

Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
            F                E  +M +       HPN+I L  V      V ++ E    G 
Sbjct: 92  DFL--------------GEASIMGQFD-----HPNIIRLEGVVTKSKPVMIVTEYMENGS 132

Query: 129 LFDRIVAQERYMEVGA-AAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIM 187
           L   +   +    V     ++R IA G+  L     VHRDL   N L +N   +   K+ 
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNIL-IN--SNLVCKVS 189

Query: 188 DFGLS-----SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GY 241
           DFGL        E       G    I + SPEA+   + TS SD+WS G++L+ ++S G 
Sbjct: 190 DFGLGRVLEDDPEAAYTTRGGKI-PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE 248

Query: 242 PPFIAQSNRQKQQMIMAGE---------FSFYE---QTWKNISSSAKQLISSLLTVDPNR 289
            P+   SN+   + +  G           + Y+     W+                D N 
Sbjct: 249 RPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQK---------------DRNN 293

Query: 290 RPSAQELLN 298
           RP  +++++
Sbjct: 294 RPKFEQIVS 302

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score =  111 bits (280), Expect = 8e-28
 Identities = 71/264 (26%), Positives = 115/264 (43%), Gaps = 57/264 (21%)

Query: 10  DEYEV-------TDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGS 62
           DE+EV        + LG G F  V  G         +VA+K+L++ GS +P         
Sbjct: 6   DEWEVPRETLKLVERLGAGQFGEVWMGYYNG---HTKVAVKSLKQ-GSMSP--------- 52

Query: 63  SSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILE 122
                             DA L  E  +M+++      H  ++ LY V   Q  +++I E
Sbjct: 53  ------------------DAFL-AEANLMKQL-----QHQRLVRLYAVVT-QEPIYIITE 87

Query: 123 LCSGGELFDRIVAQERYMEVGAAAVI---RQIAEGLAALHQANIVHRDLKPENCLFLNDR 179
               G L D +      +++    ++    QIAEG+A + + N +HRDL+  N L     
Sbjct: 88  YMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV---S 143

Query: 180 EDSPLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYI 236
           +    KI DFGL+ +     YT      F  I + +PEA+     T KSD+WS G++L  
Sbjct: 144 DTLSCKIADFGLARLIEDNEYTAREGAKF-PIKWTAPEAINYGTFTIKSDVWSFGILLTE 202

Query: 237 LLS-GYPPFIAQSNRQKQQMIMAG 259
           +++ G  P+   +N +  Q +  G
Sbjct: 203 IVTHGRIPYPGMTNPEVIQNLERG 226

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score =  114 bits (286), Expect = 1e-27
 Identities = 75/365 (20%), Positives = 133/365 (36%), Gaps = 103/365 (28%)

Query: 1   MGQETRKLTDEYEVTDI-LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGS 59
           +  E  ++ D +E     +GRG +  V +  +K   +    A+K +         G   S
Sbjct: 11  LSSERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEG------TGISMS 64

Query: 60  RGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQ--NGV 117
                         R            EI ++R++      HPNVI L  V+       V
Sbjct: 65  ------------ACR------------EIALLREL-----KHPNVISLQKVFLSHADRKV 95

Query: 118 HLILE-----LCSGGELFDRIVAQERYMEVGAAAV---IRQIAEGLAALHQANIVHRDLK 169
            L+ +     L    +      A ++ +++    V   + QI +G+  LH   ++HRDLK
Sbjct: 96  WLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLK 155

Query: 170 PENCLFLNDREDS-PLKIMDFGL-----SSVEGYTDP---VVGLFGSIDYVSPEALLQDR 220
           P N L + +  +   +KI D G      S ++   D    VV  +    Y +PE LL  R
Sbjct: 156 PANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFW----YRAPELLLGAR 211

Query: 221 ITSKS-DMWSLGVILYILLSGYPPFIAQS------------------------------- 248
             +K+ D+W++G I   LL+  P F  +                                
Sbjct: 212 HYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWED 271

Query: 249 ------------NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
                       + ++          + E+      S A  L+  LLT+DP +R ++++ 
Sbjct: 272 IKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQA 331

Query: 297 LNHPW 301
           +  P+
Sbjct: 332 MQDPY 336

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score =  113 bits (285), Expect = 1e-27
 Identities = 91/411 (22%), Positives = 151/411 (36%), Gaps = 136/411 (33%)

Query: 2   GQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRG 61
           G+  R +  +YE+   LG+G + +V + I +  GE   VA+K +                
Sbjct: 1   GRVDRHVLRKYELVKKLGKGAYGIVWKSIDRRTGE--VVAVKKIFDA------------- 45

Query: 62  SSSSSQIGFFPTRKQVSVSDALLT-NEILVMRKIVENVSPHPNVIDLYDVY--EDQNGVH 118
                    F      + +DA  T  EI+++ ++    S H N+++L +V   ++   V+
Sbjct: 46  ---------FQ-----NSTDAQRTFREIMILTEL----SGHENIVNLLNVLRADNDRDVY 87

Query: 119 LILELCSGGELFDRIVAQERYMEVGAAAVIR--------------QIAEGLAALHQANIV 164
           L+ +                 ME    AVIR              Q+ + +  LH   ++
Sbjct: 88  LVFDY----------------METDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGGLL 131

Query: 165 HRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSI---------------- 208
           HRD+KP N L LN   +  +K+ DFGLS        V                       
Sbjct: 132 HRDMKPSNIL-LN--AECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILT 188

Query: 209 DYVS------PEALLQDRITSKS-DMWSLGVILYILLSGYPPF----------------- 244
           DYV+      PE LL     +K  DMWSLG IL  +L G P F                 
Sbjct: 189 DYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVID 248

Query: 245 -----------------IAQSNRQKQQMIMAGEFSFYEQTWK---------NISSSAKQL 278
                            + +S ++K ++  + +   + +            + +  A  L
Sbjct: 249 FPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDL 308

Query: 279 ISSLLTVDPNRRPSAQELLNHPWVIGDSAKEEEMDAEIVSRLQSFNARRKL 329
           +  LL  +PN+R SA + L HP+V       EE + + +  +   N   K 
Sbjct: 309 LDKLLQFNPNKRISANDALKHPFVSIFHNPNEEPNCDHIITI-PINDNVKH 358

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score =  110 bits (278), Expect = 1e-27
 Identities = 70/307 (22%), Positives = 120/307 (39%), Gaps = 77/307 (25%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
            E ++   +G+G F  V  G  +     N+VA+K +                        
Sbjct: 21  KELKLLQTIGKGEFGDVMLGDYRG----NKVAVKCI------------------------ 52

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDV-YEDQNGVHLILELCSGGE 128
                K  + + A L  E  VM ++      H N++ L  V  E++ G++++ E  + G 
Sbjct: 53  -----KNDATAQAFL-AEASVMTQL-----RHSNLVQLLGVIVEEKGGLYIVTEYMAKGS 101

Query: 129 LFDRIVAQERYMEVGAAAVI---RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLK 185
           L D + ++ R   +G   ++     + E +  L   N VHRDL   N L     ED+  K
Sbjct: 102 LVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV---SEDNVAK 157

Query: 186 IMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPF 244
           + DFGL+  E  +    G    + + +PEAL + + ++KSD+WS G++L+ + S G  P+
Sbjct: 158 VSDFGLTK-EASSTQDTGKL-PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 215

Query: 245 IAQSNRQKQQMIMAGE---------FSFYE---QTWKNISSSAKQLISSLLTVDPNRRPS 292
                +     +  G           + YE     W                 D   RPS
Sbjct: 216 PRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHL---------------DAAMRPS 260

Query: 293 AQELLNH 299
             +L   
Sbjct: 261 FLQLREQ 267

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score =  112 bits (281), Expect = 2e-27
 Identities = 68/270 (25%), Positives = 110/270 (40%), Gaps = 51/270 (18%)

Query: 3   QETRKLTDEYEVT--DILGRGGFSVVRRGIKKTCGETNQ--VAIKTLRRIGSTTPYGFPG 58
           Q   ++  E E     +LG G F  V +G+    GE  +  VAIK LR            
Sbjct: 6   QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE----------- 54

Query: 59  SRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVH 118
              +S  +                   +E  VM  +      +P+V  L  +      V 
Sbjct: 55  --ATSPKANKEI--------------LDEAYVMASV-----DNPHVCRLLGICLTST-VQ 92

Query: 119 LILELCSGGELFDRIVAQERYMEVGAAAVI---RQIAEGLAALHQANIVHRDLKPENCLF 175
           LI +L   G L D +  +E    +G+  ++    QIA+G+  L    +VHRDL   N L 
Sbjct: 93  LITQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV 150

Query: 176 LNDREDSPLKIMDFGLSSV----EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLG 231
              +    +KI DFGL+ +    E       G    I +++ E++L    T +SD+WS G
Sbjct: 151 ---KTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYG 206

Query: 232 VILYILLS-GYPPFIAQSNRQKQQMIMAGE 260
           V ++ L++ G  P+      +   ++  GE
Sbjct: 207 VTVWELMTFGSKPYDGIPASEISSILEKGE 236

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score =  115 bits (290), Expect = 2e-27
 Identities = 79/315 (25%), Positives = 120/315 (38%), Gaps = 77/315 (24%)

Query: 9   TDEYEV-------TDILGRGGFSVVRRGIKKTCGETN-QVAIKTLRRIGSTTPYGFPGSR 60
           T +YE+          +G G F  V +GI  +       VAIKT +              
Sbjct: 382 TRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN------------- 428

Query: 61  GSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLI 120
            +S S +  F                E L MR+       HP+++ L  V  +   V +I
Sbjct: 429 CTSDSVREKFL--------------QEALTMRQF-----DHPHIVKLIGVITENP-VWII 468

Query: 121 LELCSGGELFDRIVAQERYMEVGA-AAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDR 179
           +ELC+ GEL   +  ++  +++ +      Q++  LA L     VHRD+   N L     
Sbjct: 469 MELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVL---VS 525

Query: 180 EDSPLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYI 236
            +  +K+ DFGLS       Y     G    I +++PE++   R TS SD+W  GV ++ 
Sbjct: 526 SNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESINFRRFTSASDVWMFGVCMWE 584

Query: 237 LLS-GYPPFIAQSNRQKQQMIMAGE---------FSFYE---QTWKNISSSAKQLISSLL 283
           +L  G  PF    N      I  GE          + Y    + W               
Sbjct: 585 ILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAY------------- 631

Query: 284 TVDPNRRPSAQELLN 298
             DP+RRP   EL  
Sbjct: 632 --DPSRRPRFTELKA 644

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score =  110 bits (278), Expect = 2e-27
 Identities = 45/270 (16%), Positives = 96/270 (35%), Gaps = 61/270 (22%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETN-----QVAIKTLRRIGSTTPYGFPGSRGSSS 64
           ++    + LG+G F+ + +G+++  G+       +V +K L +              +  
Sbjct: 8   EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDK--------------AHR 53

Query: 65  SSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELC 124
           +    FF                  +M K+      H +++  Y V    +   L+ E  
Sbjct: 54  NYSESFF--------------EAASMMSKL-----SHKHLVLNYGVCVCGDENILVQEFV 94

Query: 125 SGGELFDRIVAQERYMEVGAAAVI---RQIAEGLAALHQANIVHRDLKPENCL-----FL 176
             G L   +  ++    +     +   +Q+A  +  L +  ++H ++  +N L       
Sbjct: 95  KFGSLDTYL--KKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDR 152

Query: 177 NDREDSPLKIMDFGLS----SVEGYTDPVVGLFGSIDYVSPEALLQDRI-TSKSDMWSLG 231
                  +K+ D G+S      +   +        I +V PE +   +     +D WS G
Sbjct: 153 KTGNPPFIKLSDPGISITVLPKDILQER-------IPWVPPECIENPKNLNLATDKWSFG 205

Query: 232 VILYILLS-GYPPFIAQSNRQKQQMIMAGE 260
             L+ + S G  P  A  +++K Q      
Sbjct: 206 TTLWEICSGGDKPLSALDSQRKLQFYEDRH 235

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score =  112 bits (281), Expect = 3e-27
 Identities = 79/347 (22%), Positives = 125/347 (36%), Gaps = 110/347 (31%)

Query: 8   LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQ 67
           +   Y     +G G +  V   +    G   +VAIK L R                    
Sbjct: 23  VRAVYRDLQPVGSGAYGAVCSAVDGRTGA--KVAIKKLYRP------------------- 61

Query: 68  IGFFPTRKQVSVSDALLT-NEILVMRKIVENVSPHPNVIDLYDV------YEDQNGVHLI 120
             F       S   A     E+ +++ +      H NVI L DV       +D    +L+
Sbjct: 62  --FQ------SELFAKRAYRELRLLKHM-----RHENVIGLLDVFTPDETLDDFTDFYLV 108

Query: 121 LELCSGGELFDRIVAQERYMEVGAAAVIR--------------QIAEGLAALHQANIVHR 166
           +                  M      +++              Q+ +GL  +H A I+HR
Sbjct: 109 MPF----------------MGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHR 152

Query: 167 DLKPENCLFLNDREDSPLKIMDFGL--SSVEGYTDPVVGLFGSIDYVSPEALLQDRITSK 224
           DLKP N L +N  ED  LKI+DFGL   +    T  VV  +    Y +PE +L     ++
Sbjct: 153 DLKPGN-LAVN--EDCELKILDFGLARQADSEMTGYVVTRW----YRAPEVILNWMRYTQ 205

Query: 225 S-DMWSLGVILYILLSGYPPFIAQSNRQKQQMIM------------------AGEF---- 261
           + D+WS+G I+  +++G   F    +  + + IM                  A  +    
Sbjct: 206 TVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGL 265

Query: 262 ------SFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
                  F      N S  A  L+  +L +D  +R +A E L HP+ 
Sbjct: 266 PELEKKDF-ASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYF 311

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score =  112 bits (283), Expect = 4e-27
 Identities = 79/307 (25%), Positives = 121/307 (39%), Gaps = 75/307 (24%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
           +   +   LG+G F  V  G       T +VAIKTL+  G+ +P  F             
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNG---TTRVAIKTLKP-GTMSPEAF------------- 226

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
                            E  VM+K+      H  ++ LY V  ++  ++++ E  S G L
Sbjct: 227 ---------------LQEAQVMKKL-----RHEKLVQLYAVVSEE-PIYIVTEYMSKGSL 265

Query: 130 FDRIVAQERYMEVGAAAV--IRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIM 187
            D +  +          V    QIA G+A + + N VHRDL+  N L     E+   K+ 
Sbjct: 266 LDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVA 322

Query: 188 DFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPP 243
           DFGL+ +     YT      F  I + +PEA L  R T KSD+WS G++L  L + G  P
Sbjct: 323 DFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 381

Query: 244 FIAQSNRQKQQMIMAGE---------FSFYE---QTWKNISSSAKQLISSLLTVDPNRRP 291
           +    NR+    +  G           S ++   Q W+                +P  RP
Sbjct: 382 YPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRK---------------EPEERP 426

Query: 292 SAQELLN 298
           + + L  
Sbjct: 427 TFEYLQA 433

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score =  112 bits (282), Expect = 6e-27
 Identities = 72/375 (19%), Positives = 124/375 (33%), Gaps = 125/375 (33%)

Query: 8   LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQ 67
           +   Y+    +G G   +V             VAIK L R                    
Sbjct: 60  VLKRYQNLKPIGSGAQGIVCAAYDAVLDR--NVAIKKLSRPFQ----------------- 100

Query: 68  IGFFPTRKQVSVSDALLT-NEILVMRKIVENVSPHPNVIDLYDV------YEDQNGVHLI 120
                     + + A     E+++M+ +      H N+I L +V       E+   V+L+
Sbjct: 101 ----------NQTHAKRAYRELVLMKCV-----NHKNIISLLNVFTPQKTLEEFQDVYLV 145

Query: 121 LELCSGGELFDRIVAQERYMEVGAAAVIR-------------QIAEGLAALHQANIVHRD 167
           +EL                M+     VI+             Q+  G+  LH A I+HRD
Sbjct: 146 MEL----------------MDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 189

Query: 168 LKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVS------PEALLQDRI 221
           LKP N + +    D  LKI+DFGL+   G +  +        YV       PE +L    
Sbjct: 190 LKPSN-IVVK--SDCTLKILDFGLARTAGTSFMM------TPYVVTRYYRAPEVILGMGY 240

Query: 222 TSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISS 281
               D+WS+G I+  ++     F  +    +   ++    +   +  K +  + +  + +
Sbjct: 241 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 300

Query: 282 L--------------------------------------LTVDPNRRPSAQELLNHPWVI 303
                                                  L +DP +R S  + L HP++ 
Sbjct: 301 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 360

Query: 304 G--DSAKEEEMDAEI 316
              D A+ E    +I
Sbjct: 361 VWYDPAEVEAPPPQI 375

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score =  112 bits (282), Expect = 6e-27
 Identities = 68/306 (22%), Positives = 121/306 (39%), Gaps = 77/306 (25%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
            E ++   +G+G F  V  G  +     N+VA+K ++   +T                  
Sbjct: 193 KELKLLQTIGKGEFGDVMLGDYRG----NKVAVKCIKN-DAT------------------ 229

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDV-YEDQNGVHLILELCSGGE 128
                     + A L  E  VM ++      H N++ L  V  E++ G++++ E  + G 
Sbjct: 230 ----------AQAFL-AEASVMTQL-----RHSNLVQLLGVIVEEKGGLYIVTEYMAKGS 273

Query: 129 LFDRIVAQERYMEVGAAAVI---RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLK 185
           L D + ++ R   +G   ++     + E +  L   N VHRDL   N L     ED+  K
Sbjct: 274 LVDYLRSRGRS-VLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV---SEDNVAK 329

Query: 186 IMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPF 244
           + DFGL+  E  +    G    + + +PEAL + + ++KSD+WS G++L+ + S G  P+
Sbjct: 330 VSDFGLTK-EASSTQDTGKL-PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 387

Query: 245 IAQSNRQKQQMIMAGE---------FSFYE---QTWKNISSSAKQLISSLLTVDPNRRPS 292
                +     +  G           + Y+     W                 D   RP+
Sbjct: 388 PRIPLKDVVPRVEKGYKMDAPDGCPPAVYDVMKNCWHL---------------DAATRPT 432

Query: 293 AQELLN 298
             +L  
Sbjct: 433 FLQLRE 438

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score =  109 bits (273), Expect = 7e-27
 Identities = 40/288 (13%), Positives = 71/288 (24%), Gaps = 66/288 (22%)

Query: 12  YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFF 71
           Y +    G        + +        QVA+  +   G                      
Sbjct: 33  YRLLIFHGGVPPLQFWQALDTALDR--QVALTFVDPQGVLPDD----------------V 74

Query: 72  PTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFD 131
                         +  L + +I       P V  + DV   + G  ++ E   GG L +
Sbjct: 75  LQE---------TLSRTLRLSRID-----KPGVARVLDVVHTRAGGLVVAEWIRGGSLQE 120

Query: 132 RIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGL 191
             VA      VGA   ++ +A    A H+A +      P          D  + +     
Sbjct: 121 --VADTSPSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRV---SIDGDVVLAYPA- 174

Query: 192 SSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQ 251
                              +            + D+  +G  LY LL    P      R 
Sbjct: 175 ------------------TMPDA-------NPQDDIRGIGASLYALLVNRWPLPEAGVRS 209

Query: 252 KQQMIMAGEFSFYE---QTWKNISSSAKQLISSLLTVDPNRRPSAQEL 296
                               ++I      + +  +  D   R ++  L
Sbjct: 210 GLAPAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIRSASTLL 257

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score =  109 bits (274), Expect = 8e-27
 Identities = 73/327 (22%), Positives = 113/327 (34%), Gaps = 80/327 (24%)

Query: 3   QETRKLTDEYEVTD---------ILGRGGFSVVRRGI-KKTCGETNQVAIKTLRRIGSTT 52
                   +  +           ++G+G F VV  G          Q AIK+L R     
Sbjct: 5   SALLAEVKDVLIPHERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSR----- 59

Query: 53  PYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYE 112
                    +       F                E L+MR +      HPNV+ L  +  
Sbjct: 60  --------ITEMQQVEAFL--------------REGLLMRGL-----NHPNVLALIGIML 92

Query: 113 DQNGVHLI-LELCSGGELFDRIVAQERYMEVGAAAVI-RQIAEGLAALHQANIVHRDLKP 170
              G+  + L     G+L   I + +R   V        Q+A G+  L +   VHRDL  
Sbjct: 93  PPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAA 152

Query: 171 ENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGS-----IDYVSPEALLQDRITSKS 225
            NC+     E   +K+ DFGL+      +             + + + E+L   R T+KS
Sbjct: 153 RNCML---DESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKS 209

Query: 226 DMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEF---------SFYE---QTWKNIS 272
           D+WS GV+L+ LL+ G PP+           +  G           S Y+   Q W+   
Sbjct: 210 DVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPDSLYQVMQQCWEA-- 267

Query: 273 SSAKQLISSLLTVDPNRRPSAQELLNH 299
                        DP  RP+ + L+  
Sbjct: 268 -------------DPAVRPTFRVLVGE 281

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score =  113 bits (283), Expect = 8e-27
 Identities = 79/307 (25%), Positives = 121/307 (39%), Gaps = 75/307 (24%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
           +   +   LG+G F  V  G       T +VAIKTL+  G+ +P  F             
Sbjct: 267 ESLRLEVKLGQGCFGEVWMGTWNG---TTRVAIKTLKP-GTMSPEAF------------- 309

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
                            E  VM+K+      H  ++ LY V  ++  ++++ E  S G L
Sbjct: 310 ---------------LQEAQVMKKL-----RHEKLVQLYAVVSEE-PIYIVTEYMSKGSL 348

Query: 130 FDRIVAQERYMEVGAAAV--IRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIM 187
            D +  +          V    QIA G+A + + N VHRDL+  N L     E+   K+ 
Sbjct: 349 LDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVA 405

Query: 188 DFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPP 243
           DFGL+ +     YT      F  I + +PEA L  R T KSD+WS G++L  L + G  P
Sbjct: 406 DFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 464

Query: 244 FIAQSNRQKQQMIMAGE---------FSFYE---QTWKNISSSAKQLISSLLTVDPNRRP 291
           +    NR+    +  G           S ++   Q W+                +P  RP
Sbjct: 465 YPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRK---------------EPEERP 509

Query: 292 SAQELLN 298
           + + L  
Sbjct: 510 TFEYLQA 516

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score =  108 bits (273), Expect = 8e-27
 Identities = 75/329 (22%), Positives = 112/329 (34%), Gaps = 79/329 (24%)

Query: 10  DEYEVTDILGRGGFSVVRRGI-KKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQI 68
            +  + + LG G F VVRRG      G+T  VA+K L+     +                
Sbjct: 18  KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKP-DVLSQ--------------- 61

Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
                       D  +  E+  M  +      H N+I LY V      + ++ EL   G 
Sbjct: 62  --------PEAMDDFI-REVNAMHSL-----DHRNLIRLYGVVLTPP-MKMVTELAPLGS 106

Query: 129 LFDRIVAQERYMEVGAAAVI---RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLK 185
           L DR+  ++         +     Q+AEG+  L     +HRDL   N L         +K
Sbjct: 107 LLDRL--RKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLL---ATRDLVK 161

Query: 186 IMDFGLSSV-----EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS- 239
           I DFGL        + Y            + +PE+L     +  SD W  GV L+ + + 
Sbjct: 162 IGDFGLMRALPQNDDHYVMQEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTY 220

Query: 240 GYPPFIAQSNRQKQQMI-MAGE---------FSFYE---QTWKNISSSAKQLISSLLTVD 286
           G  P+I  +  Q    I   GE            Y    Q W +                
Sbjct: 221 GQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAH---------------K 265

Query: 287 PNRRPSAQELLNHPWVIGDSAKEEEMDAE 315
           P  RP+   L +        A+  +M AE
Sbjct: 266 PEDRPTFVALRD----FLLEAQPTDMRAE 290

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score =  110 bits (277), Expect = 9e-27
 Identities = 72/357 (20%), Positives = 116/357 (32%), Gaps = 109/357 (30%)

Query: 2   GQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQ-VAIKTLRRIGSTTPYGFPGSR 60
            + +RK  D ++V  + G+G F  V          T   VAIK +               
Sbjct: 15  DERSRKEMDRFQVERMAGQGTFGTV---QLGKEKSTGMSVAIKKVI-------------- 57

Query: 61  GSSSSSQIGFFPTRKQVSVSDALLTN-EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHL 119
                               D    N E+ +M+ +   V  HPN++ L   +        
Sbjct: 58  -------------------QDPRFRNRELQIMQDL--AVLHHPNIVQLQSYFYTLG---- 92

Query: 120 ILELCSGGELFDRIVAQERYMEVGAAAVIR-------------------QIAEGLAALHQ 160
                   +++  +V  E Y+        R                   Q+   +  LH 
Sbjct: 93  ---ERDRRDIYLNVV-ME-YVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHL 147

Query: 161 --ANIVHRDLKPENCLFLNDREDSPLKIMDFGL----SSVEGYTDPVVGLFGSIDYVSPE 214
              N+ HRD+KP N L   +  D  LK+ DFG     S  E     +   +    Y +PE
Sbjct: 148 PSVNVCHRDIKPHNVLV--NEADGTLKLCDFGSAKKLSPSEPNVAYICSRY----YRAPE 201

Query: 215 ALL-QDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIM---------------- 257
            +      T+  D+WS+G I   ++ G P F   ++  +   I+                
Sbjct: 202 LIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNP 261

Query: 258 -AGEFSFYEQT---WKNI--------SSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
              +   Y      W N+        +  A  L+S+LL   P  R    E L HP+ 
Sbjct: 262 SHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYF 318

>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens} Length = 202

 Score =  105 bits (264), Expect = 2e-26
 Identities = 39/180 (21%), Positives = 72/180 (40%), Gaps = 21/180 (11%)

Query: 359 LNEEEIQNLRIHFRTICANGDNATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVD 418
            ++  +  L   FR +  N     LS  +  L+ +   ++ PL  RI + F  +    VD
Sbjct: 23  FSQASLLRLHHRFRALDRNKK-GYLSRMD--LQQIGALAVNPLGDRIIESFFPDGSQRVD 79

Query: 419 MREILCGFSSLRKSQGDDA-----------------LRLCFQMYDIDRSGCITKEEVASM 461
               +   +  R  + +D                  L   FQ+YD+DR G I++ E+  +
Sbjct: 80  FPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQV 139

Query: 462 LRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDSSLQDVVLSSLRQQ 521
           LR +    +  +  E    D      D + DG V+F EF  ++++    Q + +  L+  
Sbjct: 140 LRLMVGVQVTEEQLE-NIADRTVQEADEDGDGAVSFVEFTKSLEKMDVEQKMSIRILKHH 198

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score =  108 bits (272), Expect = 2e-26
 Identities = 70/333 (21%), Positives = 116/333 (34%), Gaps = 87/333 (26%)

Query: 4   ETRKLTDEYEV-------TDILGRGGFSVVRRGI-KKTCGETNQVAIKTLRRIGSTTPYG 55
           E ++  ++  +         +LG+G F  VR    K+  G   +VA+K L+         
Sbjct: 10  ELKEKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKA-------- 61

Query: 56  FPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDV----- 110
                   +SS I            +  L  E   M++       HP+V  L  V     
Sbjct: 62  -----DIIASSDI------------EEFL-REAACMKEF-----DHPHVAKLVGVSLRSR 98

Query: 111 -YEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIR------QIAEGLAALHQANI 163
                    +IL     G+L   ++A           +         IA G+  L   N 
Sbjct: 99  AKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNF 158

Query: 164 VHRDLKPENCLFLNDREDSPLKIMDFGLS----SVEGYTDPVVGLFGSIDYVSPEALLQD 219
           +HRDL   NC+     ED  + + DFGLS    S + Y          + +++ E+L  +
Sbjct: 159 IHRDLAARNCML---AEDMTVCVADFGLSRKIYSGDYYRQGCASKL-PVKWLALESLADN 214

Query: 220 RITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEF---------SFYE---Q 266
             T  SD+W+ GV ++ +++ G  P+    N +    ++ G             Y+   Q
Sbjct: 215 LYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQPPECMEEVYDLMYQ 274

Query: 267 TWKNISSSAKQLISSLLTVDPNRRPSAQELLNH 299
            W                 DP +RPS   L   
Sbjct: 275 CWS---------------ADPKQRPSFTCLRME 292

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score =  108 bits (272), Expect = 2e-26
 Identities = 60/305 (19%), Positives = 116/305 (38%), Gaps = 76/305 (24%)

Query: 17  ILGRGGFSVVRRGIKKTCGETNQ--VAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTR 74
           +LG G F  V +G+    GE+ +  V IK +                S   S        
Sbjct: 20  VLGSGVFGTVHKGVWIPEGESIKIPVCIKVIED-------------KSGRQSFQAV---- 62

Query: 75  KQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIV 134
                     T+ +L +  +      H +++ L  +      + L+ +    G L D + 
Sbjct: 63  ----------TDHMLAIGSL-----DHAHIVRLLGLCPGS-SLQLVTQYLPLGSLLDHV- 105

Query: 135 AQERYMEVGAAAVI---RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGL 191
            ++    +G   ++    QIA+G+  L +  +VHR+L   N L    +  S +++ DFG+
Sbjct: 106 -RQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLL---KSPSQVQVADFGV 161

Query: 192 SSV----EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIA 246
           + +    +            I +++ E++   + T +SD+WS GV ++ L++ G  P+  
Sbjct: 162 ADLLPPDDKQLLYSEAKT-PIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAG 220

Query: 247 QSNRQKQQMIMAGE---------FSFYE---QTWKNISSSAKQLISSLLTVDPNRRPSAQ 294
               +   ++  GE            Y    + W                +D N RP+ +
Sbjct: 221 LRLAEVPDLLEKGERLAQPQICTIDVYMVMVKCWM---------------IDENIRPTFK 265

Query: 295 ELLNH 299
           EL N 
Sbjct: 266 ELANE 270

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score =  108 bits (271), Expect = 3e-26
 Identities = 73/333 (21%), Positives = 118/333 (35%), Gaps = 82/333 (24%)

Query: 1   MGQETRKLTDEYEV-------TDILGRGGFSVVRRGIKKTC---GETNQVAIKTLRRIGS 50
              +T  ++D  EV          LG G F  V  G            QVA+KTL     
Sbjct: 14  FAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE--- 70

Query: 51  TTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDV 110
                       S   ++ F                E L++ K       H N++    V
Sbjct: 71  ----------VCSEQDELDFL--------------MEALIISKF-----NHQNIVRCIGV 101

Query: 111 YEDQNGVHLILELCSGGELFDRIVAQERYMEVGAA-------AVIRQIAEGLAALHQANI 163
                   +++EL +GG+L   +          ++        V R IA G   L + + 
Sbjct: 102 SLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF 161

Query: 164 VHRDLKPENCLFLNDREDSPLKIMDFGLS----SVEGYTDPVVGLFGSIDYVSPEALLQD 219
           +HRD+   NCL          KI DFG++        Y      +   + ++ PEA ++ 
Sbjct: 162 IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP-VKWMPPEAFMEG 220

Query: 220 RITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEF---------SFYE---Q 266
             TSK+D WS GV+L+ + S GY P+ ++SN++  + + +G             Y    Q
Sbjct: 221 IFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQ 280

Query: 267 TWKNISSSAKQLISSLLTVDPNRRPSAQELLNH 299
            W+                 P  RP+   +L  
Sbjct: 281 CWQ---------------HQPEDRPNFAIILER 298

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score =  110 bits (276), Expect = 4e-26
 Identities = 72/310 (23%), Positives = 117/310 (37%), Gaps = 81/310 (26%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
           +  ++   LG G F  V            +VA+KT++  GS +   F             
Sbjct: 188 ESLKLEKKLGAGQFGEVWMATYNKHT---KVAVKTMKP-GSMSVEAF------------- 230

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
                            E  VM+ +      H  ++ L+ V   +  +++I E  + G L
Sbjct: 231 ---------------LAEANVMKTL-----QHDKLVKLHAVVT-KEPIYIITEFMAKGSL 269

Query: 130 FD--RIVAQERYMEVGAAAVI---RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPL 184
            D  +    +   +     +I    QIAEG+A + Q N +HRDL+  N L          
Sbjct: 270 LDFLK---SDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILV---SASLVC 323

Query: 185 KIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-G 240
           KI DFGL+ V     YT      F  I + +PEA+     T KSD+WS G++L  +++ G
Sbjct: 324 KIADFGLARVIEDNEYTAREGAKF-PIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYG 382

Query: 241 YPPFIAQSNRQKQQMIMAGE---------FSFYE---QTWKNISSSAKQLISSLLTVDPN 288
             P+   SN +  + +  G             Y    + WKN                P 
Sbjct: 383 RIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKN---------------RPE 427

Query: 289 RRPSAQELLN 298
            RP+ + + +
Sbjct: 428 ERPTFEYIQS 437

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score =  106 bits (268), Expect = 7e-26
 Identities = 62/262 (23%), Positives = 102/262 (38%), Gaps = 53/262 (20%)

Query: 16  DILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRK 75
           D++G G F  V +   K  G     AIK ++               +S      F     
Sbjct: 31  DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKE-------------YASKDDHRDFA---- 73

Query: 76  QVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFD---- 131
                      E+ V+ K+      HPN+I+L    E +  ++L +E    G L D    
Sbjct: 74  ----------GELEVLCKL----GHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRK 119

Query: 132 -RIVAQERYMEVGAAAVI-----------RQIAEGLAALHQANIVHRDLKPENCLFLNDR 179
            R++  +    +  +                +A G+  L Q   +HRDL   N L     
Sbjct: 120 SRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV---G 176

Query: 180 EDSPLKIMDFGLS-SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY-IL 237
           E+   KI DFGLS   E Y    +G    + +++ E+L     T+ SD+WS GV+L+ I+
Sbjct: 177 ENYVAKIADFGLSRGQEVYVKKTMGRL-PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 235

Query: 238 LSGYPPFIAQSNRQKQQMIMAG 259
             G  P+   +  +  + +  G
Sbjct: 236 SLGGTPYCGMTCAELYEKLPQG 257

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score =  105 bits (265), Expect = 1e-25
 Identities = 74/333 (22%), Positives = 123/333 (36%), Gaps = 86/333 (25%)

Query: 3   QETRKLTDEYEV-------TDILGRGGFSVVRRGI-KKTCGETNQVAIKTLRRIGSTTPY 54
           +E +   ++  +         ILG G F  V  G  K+  G + +VA+KT++        
Sbjct: 20  EELQNKLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKL------- 72

Query: 55  GFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDV---- 110
                  +SS  +I            +  L +E   M+        HPNVI L  V    
Sbjct: 73  ------DNSSQREI------------EEFL-SEAACMKDF-----SHPNVIRLLGVCIEM 108

Query: 111 -YEDQNGVHLILELCSGGELFD-----RIVAQERYMEVGAAAVI-RQIAEGLAALHQANI 163
             +      +IL     G+L       R+    +++ +         IA G+  L   N 
Sbjct: 109 SSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNF 168

Query: 164 VHRDLKPENCLFLNDREDSPLKIMDFGLS----SVEGYTDPVVGLFGSIDYVSPEALLQD 219
           +HRDL   NC+    R+D  + + DFGLS    S + Y    +     + +++ E+L   
Sbjct: 169 LHRDLAARNCML---RDDMTVCVADFGLSKKIYSGDYYRQGRIAKM-PVKWIAIESLADR 224

Query: 220 RITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEF---------SFYE---Q 266
             TSKSD+W+ GV ++ + + G  P+    N +    ++ G             YE    
Sbjct: 225 VYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQPEDCLDELYEIMYS 284

Query: 267 TWKNISSSAKQLISSLLTVDPNRRPSAQELLNH 299
            W+                DP  RP+   L   
Sbjct: 285 CWR---------------TDPLDRPTFSVLRLQ 302

>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1} Length = 197

 Score =  103 bits (258), Expect = 1e-25
 Identities = 44/218 (20%), Positives = 85/218 (38%), Gaps = 29/218 (13%)

Query: 294 QELLNHPWVIGDS--AKEEEMDAEIVSRLQSFNARRKLRAAAIASVLSSTIFLRRTKKLK 351
               +H     +       E+ + ++  L++F    +L+  A+                 
Sbjct: 2   HHHHHHSSGRENLYFQGHVELSSTLLKNLKNFKKENELKKIAL----------------- 44

Query: 352 NLLGSHDLNEEEIQNLRIHFRTICANGDNATLSEFEEVLKAMNMSSLVPLAPRIFDLF-- 409
            ++  H L + EI NLR  F  +  +    TLS  +E+L  +       + P I  +   
Sbjct: 45  TIIAKH-LCDVEINNLRNIFIALDVDNSG-TLS-SQEILDGLKKIGYQKIPPDIHQVLRD 101

Query: 410 -DNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDD 468
            D+N  G +   + L      +     +   + F+ +DID +G I+ EE   + R    D
Sbjct: 102 IDSNASGQIHYTDFLAATIDKQTYLKKEVCLIPFKFFDIDGNGKISVEE---LKRIFGRD 158

Query: 469 CLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR 506
            +   + +   +D +   +D N DG++ F EF   M +
Sbjct: 159 DIENPLID-KAIDSLLQEVDLNGDGEIDFHEFMLMMSK 195

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score =  107 bits (268), Expect = 2e-25
 Identities = 57/255 (22%), Positives = 100/255 (39%), Gaps = 46/255 (18%)

Query: 16  DILGRGGFSVVRRGI-KKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTR 74
           +++GRG F  V  G      G+    A+K+L R              +       F    
Sbjct: 95  EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR-------------ITDIGEVSQFL--- 138

Query: 75  KQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDV-YEDQNGVHLILELCSGGELFDRI 133
                       E ++M+        HPNV+ L  +    +    ++L     G+L + I
Sbjct: 139 -----------TEGIIMKDF-----SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI 182

Query: 134 VAQERYMEVGA-AAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS 192
             +     V        Q+A+G+  L     VHRDL   NC+     E   +K+ DFGL+
Sbjct: 183 RNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCML---DEKFTVKVADFGLA 239

Query: 193 ------SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFI 245
                   +   +        + +++ E+L   + T+KSD+WS GV+L+ L++ G PP+ 
Sbjct: 240 RDMYDKEFDSVHNKTGAKL-PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP 298

Query: 246 AQSNRQKQQMIMAGE 260
             +       ++ G 
Sbjct: 299 DVNTFDITVYLLQGR 313

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score =  105 bits (265), Expect = 3e-25
 Identities = 73/361 (20%), Positives = 124/361 (34%), Gaps = 106/361 (29%)

Query: 8   LTDEYEVTDILGRGGFS-VVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSS 66
           L+  YE+ D LG G F  VV     K  G    VA+K ++   +   Y            
Sbjct: 12  LSARYEIVDTLGEGAFGKVVECIDHKAGGRH--VAVKIVK---NVDRY------------ 54

Query: 67  QIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHP--NVIDLYDVYEDQNGVHLIL--E 122
                   +      A    EI V+  +     P+     + + + +E     H+ +  E
Sbjct: 55  -------CEA-----ARS--EIQVLEHLNTT-DPNSTFRCVQMLEWFEHHG--HICIVFE 97

Query: 123 LCSGGELFDRIVAQERYMEVGAAAV---IRQIAEGLAALHQANIVHRDLKPENCLFLNDR 179
           L  G   +D  + +  ++      +     QI + +  LH   + H DLKPEN LF+   
Sbjct: 98  LL-GLSTYD-FIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSD 155

Query: 180 ----------------EDSPLKIMDFGLSSVEGYTDP--VVGLFGSIDYVSPEALLQDRI 221
                            +  +K++DFG ++ +       V        Y +PE +L    
Sbjct: 156 YTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHSTLVSTRH----YRAPEVILALGW 211

Query: 222 TSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMA--GEFS------------FYEQ- 266
           +   D+WS+G IL     G+  F    +++   M+    G               F+   
Sbjct: 212 SQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDR 271

Query: 267 -TWKNISSSAK------------------------QLISSLLTVDPNRRPSAQELLNHPW 301
             W   SS+ +                         LI  +L  DP +R + +E L HP+
Sbjct: 272 LDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPF 331

Query: 302 V 302
            
Sbjct: 332 F 332

>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A Length = 191

 Score =  101 bits (255), Expect = 3e-25
 Identities = 33/213 (15%), Positives = 76/213 (35%), Gaps = 27/213 (12%)

Query: 297 LNHPWV-IGDSAKEEEMDAEIVSRLQSFNARRKLRAAAIASVLSSTIFLRRTKKLKNLLG 355
           ++H                 ++   +++    K +  A+  +                  
Sbjct: 1   MHHHHHHSSGRENLYFQGIHVLENFKNYGLLLKFQKLAMTII------------------ 42

Query: 356 SHDLNEEEIQNLRIHFRTICANGDNA-TLSEFEEVLKAM--NMSSLVPLAPRIFDLFDNN 412
           +   N+ +++ L+  F  +  +G    T  + ++ L+     +         + D  D++
Sbjct: 43  AQQSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLPYNFD---LLLDQIDSD 99

Query: 413 RDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPV 472
             G +D  E +      ++      +   F+++D+D  G IT  E+A +L          
Sbjct: 100 GSGKIDYTEFIAAALDRKQLS-KKLIYCAFRVFDVDNDGEITTAELAHILYNGNKKGNIT 158

Query: 473 DITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQ 505
                 ++  +   +D NNDGK+ F EF   M+
Sbjct: 159 QRDV-NRVKRMIRDVDKNNDGKIDFHEFSEMMK 190

>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A Length = 191

 Score = 56.1 bits (136), Expect = 2e-09
 Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 7/75 (9%)

Query: 438 LRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTF 497
           L+  F + D D  G ITKE++   L           +  P   D + D +D++  GK+ +
Sbjct: 54  LKSTFLVLDEDGKGYITKEQLKKGLEKD-------GLKLPYNFDLLLDQIDSDGSGKIDY 106

Query: 498 DEFRAAMQRDSSLQD 512
            EF AA      L  
Sbjct: 107 TEFIAAALDRKQLSK 121

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score =  105 bits (265), Expect = 4e-25
 Identities = 74/333 (22%), Positives = 118/333 (35%), Gaps = 82/333 (24%)

Query: 1   MGQETRKLTDEYEV-------TDILGRGGFSVVRRGIKKTC---GETNQVAIKTLRRIGS 50
              +T  ++D  EV          LG G F  V  G            QVA+KTL     
Sbjct: 55  FAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE--- 111

Query: 51  TTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDV 110
                       S   ++ F                E L++ K       H N++    V
Sbjct: 112 ----------VCSEQDELDFL--------------MEALIISKFN-----HQNIVRCIGV 142

Query: 111 YEDQNGVHLILELCSGGELFDRIVAQERYMEVGAA-------AVIRQIAEGLAALHQANI 163
                   ++LEL +GG+L   +          ++        V R IA G   L + + 
Sbjct: 143 SLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF 202

Query: 164 VHRDLKPENCLFLNDREDSPLKIMDFGLS----SVEGYTDPVVGLFGSIDYVSPEALLQD 219
           +HRD+   NCL          KI DFG++        Y      +   + ++ PEA ++ 
Sbjct: 203 IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLP-VKWMPPEAFMEG 261

Query: 220 RITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEF---------SFYE---Q 266
             TSK+D WS GV+L+ + S GY P+ ++SN++  + + +G             Y    Q
Sbjct: 262 IFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQ 321

Query: 267 TWKNISSSAKQLISSLLTVDPNRRPSAQELLNH 299
            W+                 P  RP+   +L  
Sbjct: 322 CWQ---------------HQPEDRPNFAIILER 339

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score =  104 bits (262), Expect = 4e-25
 Identities = 57/256 (22%), Positives = 100/256 (39%), Gaps = 44/256 (17%)

Query: 13  EVTDILGRGGFSVVRRGI-KKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFF 71
              +++GRG F  V  G      G+    A+K+L R              +       F 
Sbjct: 28  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR-------------ITDIGEVSQFL 74

Query: 72  PTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDV-YEDQNGVHLILELCSGGELF 130
                          E ++M+        HPNV+ L  +    +    ++L     G+L 
Sbjct: 75  --------------TEGIIMKDF-----SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 115

Query: 131 DRIVAQERYMEVGAAAVI-RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDF 189
           + I  +     V        Q+A+G+  L     VHRDL   NC+     E   +K+ DF
Sbjct: 116 NFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCML---DEKFTVKVADF 172

Query: 190 GLSSVEGYTDPVVGLFGS-----IDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPP 243
           GL+      +       +     + +++ E+L   + T+KSD+WS GV+L+ L++ G PP
Sbjct: 173 GLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 232

Query: 244 FIAQSNRQKQQMIMAG 259
           +   +       ++ G
Sbjct: 233 YPDVNTFDITVYLLQG 248

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score =  105 bits (264), Expect = 6e-25
 Identities = 68/374 (18%), Positives = 117/374 (31%), Gaps = 122/374 (32%)

Query: 2   GQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQ-VAIKTLRRIGSTTPYGFPGSR 60
           G ET   + +Y +   LG G F +V    +    E+ +  A+K + +             
Sbjct: 1   GLETS--SKKYSLGKTLGTGSFGIV---CEVFDIESGKRFALKKVLQ------------- 42

Query: 61  GSSSSSQIGFFPTRKQVSVSDALLTN-EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHL 119
                               D    N E+ +M+ +      H N+I L D +        
Sbjct: 43  --------------------DPRYKNRELDIMKVL-----DHVNIIKLVDYFYTTGDEEP 77

Query: 120 ILELCSGGELFDRIVAQER----------------------YMEVGAAAVIR-------- 149
                                                    Y+      V++        
Sbjct: 78  KPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLKSFIRSGRS 137

Query: 150 -----------QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGL----SSV 194
                      Q+   +  +H   I HRD+KP+N L   + +D+ LK+ DFG        
Sbjct: 138 IPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLV--NSKDNTLKLCDFGSAKKLIPS 195

Query: 195 EGYTDPVVGLFGSIDYVSPEALL-QDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQ 253
           E     +   F    Y +PE +L     T   D+WS+G +   L+ G P F  +++  + 
Sbjct: 196 EPSVAYICSRF----YRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQL 251

Query: 254 QMIM-----------------AGEFSF---YEQTWKNI-----SSSAKQLISSLLTVDPN 288
             I+                   E  F     + W+ I      S A  L+  +L  +P+
Sbjct: 252 VRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPD 311

Query: 289 RRPSAQELLNHPWV 302
            R +  E + HP+ 
Sbjct: 312 LRINPYEAMAHPFF 325

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score =  104 bits (262), Expect = 8e-25
 Identities = 68/365 (18%), Positives = 124/365 (33%), Gaps = 108/365 (29%)

Query: 8   LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQ 67
           L + + V   +G G F  V         +    A+K +R   +   Y             
Sbjct: 33  LNNAFLVIRKMGDGTFGRVLLCQHIDNKK--YYAVKVVR---NIKKY------------- 74

Query: 68  IGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLIL--ELCS 125
                  +      A +  E  +++KI  +   + N++  +  +   +  H+ L  E   
Sbjct: 75  ------TRS-----AKI--EADILKKIQNDDINNNNIVKYHGKFMYYD--HMCLIFEPL- 118

Query: 126 GGELFDRIVAQERYMEVGAAAV---IRQIAEGLAALHQANIVHRDLKPENCLFLND---- 178
           G  L++ I  +  Y       +     +I + L  L + ++ H DLKPEN L  +     
Sbjct: 119 GPSLYEII-TRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEK 177

Query: 179 ------------------REDSPLKIMDFGLSSVEG-YTDPVVGLFGSIDYVSPEALLQD 219
                              + + +K++DFG ++ +  Y   ++    +  Y +PE +L  
Sbjct: 178 SLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSII---NTRQYRAPEVILNL 234

Query: 220 RITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMA-----------------GEFS 262
                SDMWS G +L  L +G   F    + +   M+ +                 G   
Sbjct: 235 GWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKY 294

Query: 263 FYEQ----TWKNISSSAK---------------------QLISSLLTVDPNRRPSAQELL 297
             +      W   +SS                         + S+L +DP  RPS  ELL
Sbjct: 295 VNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELL 354

Query: 298 NHPWV 302
            H ++
Sbjct: 355 KHKFL 359

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score =  103 bits (259), Expect = 2e-24
 Identities = 81/368 (22%), Positives = 128/368 (34%), Gaps = 106/368 (28%)

Query: 8   LTDEYEVTDILGRGGFS-VVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSS 66
           L + YE+   LG G F  VV            QVA+K +R   +   Y            
Sbjct: 17  LQERYEIVGNLGEGTFGKVVECLDHARGKS--QVALKIIR---NVGKY------------ 59

Query: 67  QIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHP--NVIDLYDVYEDQNGVHLIL--E 122
                  R+      A L  EI V++KI E          + + D +      H+ +  E
Sbjct: 60  -------REA-----ARL--EINVLKKIKEK-DKENKFLCVLMSDWFNFHG--HMCIAFE 102

Query: 123 LCSGGELFDRIVAQERYMEVGAAAV---IRQIAEGLAALHQANIVHRDLKPENCLFLNDR 179
           L  G   F+  + +  +       V     Q+   L  LH+  + H DLKPEN LF+N  
Sbjct: 103 LL-GKNTFE-FLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSE 160

Query: 180 ----------------EDSPLKIMDFGLSSVEGYTDP--VVGLFGSIDYVSPEALLQDRI 221
                           +++ +++ DFG ++ +       V        Y  PE +L+   
Sbjct: 161 FETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTTIVATRH----YRPPEVILELGW 216

Query: 222 TSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMA--GEFS------------FYEQ- 266
               D+WS+G IL+    G+  F    NR+   M+    G               FY+  
Sbjct: 217 AQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGG 276

Query: 267 -TWKNISSSAKQ------------------------LISSLLTVDPNRRPSAQELLNHPW 301
             W   SS  +                         L+  +L  DP +R +  E L HP+
Sbjct: 277 LVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPF 336

Query: 302 VIGDSAKE 309
             G + +E
Sbjct: 337 FAGLTPEE 344

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score =  103 bits (258), Expect = 2e-24
 Identities = 69/352 (19%), Positives = 122/352 (34%), Gaps = 96/352 (27%)

Query: 10  DEYEV-------TDILGRGGFSVVRRGI-----KKTCGETNQVAIKTLRRIGSTTPYGFP 57
            ++E           LG G F  V         K    E   VA+K L+           
Sbjct: 28  PKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK----------- 76

Query: 58  GSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGV 117
               ++                      +E+ +M+ I      H N+I+L         +
Sbjct: 77  --DDATEKDLSDLV--------------SEMEMMKMI----GKHKNIINLLGACTQDGPL 116

Query: 118 HLILELCSGGELFD-----RIVAQERYMEVGAAAVI-----------RQIAEGLAALHQA 161
           ++I+E  S G L +     R    E   ++                  Q+A G+  L   
Sbjct: 117 YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ 176

Query: 162 NIVHRDLKPENCLFLNDREDSPLKIMDFGLS----SVEGYTDPVVGLFGSIDYVSPEALL 217
             +HRDL   N L     E++ +KI DFGL+    +++ Y     G    + +++PEAL 
Sbjct: 177 KCIHRDLAARNVLV---TENNVMKIADFGLARDINNIDYYKKTTNGRL-PVKWMAPEALF 232

Query: 218 QDRITSKSDMWSLGVILY-ILLSGYPPFIAQSNRQKQQMIMAG---------EFSFYE-- 265
               T +SD+WS GV+++ I   G  P+      +  +++  G             Y   
Sbjct: 233 DRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMM 292

Query: 266 -QTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH-PWVIGDSAKEEEMDAE 315
              W                  P++RP+ ++L+     ++  +  EE +D  
Sbjct: 293 RDCWHA---------------VPSQRPTFKQLVEDLDRILTLTTNEEYLDLS 329

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score =  103 bits (258), Expect = 2e-24
 Identities = 65/334 (19%), Positives = 115/334 (34%), Gaps = 92/334 (27%)

Query: 17  ILGRGGFSVVRRG----IKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFP 72
            LG G F  V       + K      +VA+K L+               + +  +     
Sbjct: 53  TLGAGAFGKVVEATAFGLGKEDAVL-KVAVKMLK-------------STAHADEKEALM- 97

Query: 73  TRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFD- 131
                        +E+ +M  +      H N+++L         V +I E C  G+L + 
Sbjct: 98  -------------SELKIMSHL----GQHENIVNLLGACTHGGPVLVITEYCCYGDLLNF 140

Query: 132 ----RIVAQERYMEVGAAAVI---------RQIAEGLAALHQANIVHRDLKPENCLFLND 178
                 V +       A +            Q+A+G+A L   N +HRD+   N L  N 
Sbjct: 141 LRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNG 200

Query: 179 REDSPLKIMDFGLS----SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVIL 234
                 KI DFGL+    +   Y          + +++PE++     T +SD+WS G++L
Sbjct: 201 HV---AKIGDFGLARDIMNDSNYIVKGNARL-PVKWMAPESIFDCVYTVQSDVWSYGILL 256

Query: 235 Y-ILLSG---YPPFIAQSNRQKQQMIMAG------EF---SFYE---QTWKNISSSAKQL 278
           + I   G   YP      N +  +++  G       F   + Y      W          
Sbjct: 257 WEIFSLGLNPYPGI--LVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWAL-------- 306

Query: 279 ISSLLTVDPNRRPSAQELLNH-PWVIGDSAKEEE 311
                  +P  RP+ Q++ +       +  +E +
Sbjct: 307 -------EPTHRPTFQQICSFLQEQAQEDRRERD 333

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score =  102 bits (257), Expect = 5e-24
 Identities = 67/335 (20%), Positives = 112/335 (33%), Gaps = 95/335 (28%)

Query: 10  DEYEV-------TDILGRGGFSVVRRGI-----KKTCGETNQVAIKTLRRIGSTTPYGFP 57
             +E+          LG G F  V         K       +VA+K L+           
Sbjct: 62  PRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKS---------- 111

Query: 58  GSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGV 117
               ++                      +E+ +M+ I      H N+I+L         +
Sbjct: 112 ---DATEKDLSDLI--------------SEMEMMKMI----GKHKNIINLLGACTQDGPL 150

Query: 118 HLILELCSGGELFD-----RIVAQERYMEVGAAAVI-----------RQIAEGLAALHQA 161
           ++I+E  S G L +     R    E                       Q+A G+  L   
Sbjct: 151 YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK 210

Query: 162 NIVHRDLKPENCLFLNDREDSPLKIMDFGLS----SVEGYTDPVVGLFGSIDYVSPEALL 217
             +HRDL   N L     ED+ +KI DFGL+     ++ Y     G    + +++PEAL 
Sbjct: 211 KCIHRDLAARNVLV---TEDNVMKIADFGLARDIHHIDYYKKTTNGRL-PVKWMAPEALF 266

Query: 218 QDRITSKSDMWSLGVILY-ILLSGYPPFIAQSNRQKQQMIMAG---------EFSFYE-- 265
               T +SD+WS GV+L+ I   G  P+      +  +++  G             Y   
Sbjct: 267 DRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMM 326

Query: 266 -QTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH 299
              W                  P++RP+ ++L+  
Sbjct: 327 RDCWHA---------------VPSQRPTFKQLVED 346

>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A Length = 323

 Score =  101 bits (253), Expect = 7e-24
 Identities = 34/257 (13%), Positives = 82/257 (31%), Gaps = 44/257 (17%)

Query: 264 YEQTWKNISSSAKQLISSLLTVDPNR------RPSAQELLNHPWVIGDSAKEEEMDAEIV 317
            ++    I+   ++  + L   D         R  A+           +A+++ + + + 
Sbjct: 39  RDRLEAQIAQKEQEQKAKLAEYDQKVQNEFDARERAEREREAARGDA-AAEKQRLASLLK 97

Query: 318 SRLQSFNARRKLRAAAIASVLSSTIFLRRTKKLKNLLGSHDLNEEEIQNLRIHFRTICAN 377
                 +   +LR +                          L+EE+   LR  F +   +
Sbjct: 98  DLEDDASGYNRLRPSK-----------------------PMLSEEDTNILRQLFLSSAVS 134

Query: 378 GDNA-TLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDD 436
           G    +  + ++VL     +       ++F + +N+  G +    ++   + L       
Sbjct: 135 GSGKFSFQDLKQVLAKYADTIPEGPLKKLFVMVENDTKGRMSYITLVAVANDLAA----- 189

Query: 437 ALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVT 496
            L   F+  D + +G ++++E       L          +    D +F   D +    V 
Sbjct: 190 -LVADFRKIDTNSNGTLSRKEFREHFVRL-------GFDKKSVQDALFRYADEDESDDVG 241

Query: 497 FDEFRAAMQRDSSLQDV 513
           F E+         L+ +
Sbjct: 242 FSEYVHLGLCLLVLRIL 258

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score =  102 bits (255), Expect = 8e-24
 Identities = 75/363 (20%), Positives = 124/363 (34%), Gaps = 106/363 (29%)

Query: 8   LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQ 67
             D YE+  ++G+G F  V +   +   E   VAIK ++   +   +             
Sbjct: 52  WMDRYEIDSLIGKGSFGQVVKAYDRVEQE--WVAIKIIK---NKKAF------------- 93

Query: 68  IGFFPTRKQVSVSDALLTNEILVMRKIVENVSPH--PNVIDLYDVYEDQNGVHLIL--EL 123
                   Q     A +  E+ ++  + ++        ++ L   +  +N  HL L  E+
Sbjct: 94  ------LNQ-----AQI--EVRLLELMNKH-DTEMKYYIVHLKRHFMFRN--HLCLVFEM 137

Query: 124 CSGGELFDRIVA-QERYMEVGAAAVI-RQIAEGLAALH--QANIVHRDLKPENCLFLNDR 179
            S   L+D +     R + +       +Q+   L  L   + +I+H DLKPEN L  N +
Sbjct: 138 LSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPK 196

Query: 180 EDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS 239
             S +KI+DFG S   G    +     S  Y SPE LL        DMWSLG IL  + +
Sbjct: 197 -RSAIKIVDFGSSCQLG--QRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHT 253

Query: 240 GY---------------------PP--FIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAK 276
           G                      PP   + Q+ + ++      + ++  +  K+     K
Sbjct: 254 GEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYK 313

Query: 277 Q-------------------------------------LISSLLTVDPNRRPSAQELLNH 299
                                                 LI  +L  DP  R      L H
Sbjct: 314 PPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQH 373

Query: 300 PWV 302
            + 
Sbjct: 374 SFF 376

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score =  101 bits (253), Expect = 8e-24
 Identities = 81/327 (24%), Positives = 127/327 (38%), Gaps = 88/327 (26%)

Query: 10  DEYEV-------TDILGRGGFSVVRRGIKKTCGETN---QVAIKTLRRIGSTTPYGFPGS 59
           DE+EV       +  LG+G F +V  G+ K   +     +VAIKT+              
Sbjct: 18  DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN------------- 64

Query: 60  RGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHL 119
             +S   +I F               NE  VM++         +V+ L  V        +
Sbjct: 65  EAASMRERIEFL--------------NEASVMKEF-----NCHHVVRLLGVVSQGQPTLV 105

Query: 120 ILELCSGGEL--FDRIVAQERYMEVGAAAV--------IRQIAEGLAALHQANIVHRDLK 169
           I+EL + G+L  + R +          A            +IA+G+A L+    VHRDL 
Sbjct: 106 IMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLA 165

Query: 170 PENCLFLNDREDSPLKIMDFGLS----SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKS 225
             NC+     ED  +KI DFG++      + Y     GL   + ++SPE+L     T+ S
Sbjct: 166 ARNCMV---AEDFTVKIGDFGMTRDIYETDYYRKGGKGLL-PVRWMSPESLKDGVFTTYS 221

Query: 226 DMWSLGVILY-ILLSGYPPFIAQSNRQKQQMIMAGE---------FSFYE---QTWKNIS 272
           D+WS GV+L+ I      P+   SN Q  + +M G             +E     W+   
Sbjct: 222 DVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQ--- 278

Query: 273 SSAKQLISSLLTVDPNRRPSAQELLNH 299
                        +P  RPS  E+++ 
Sbjct: 279 ------------YNPKMRPSFLEIISS 293

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score =  102 bits (256), Expect = 1e-23
 Identities = 70/422 (16%), Positives = 127/422 (30%), Gaps = 154/422 (36%)

Query: 8   LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQ 67
           + D Y +  ++GRG +  V     K   +   VAIK + R+                   
Sbjct: 24  VPDNYIIKHLIGRGSYGYVYLAYDKNTEK--NVAIKKVNRM------------------- 62

Query: 68  IGFFPTRKQVSVSDALLT-NEILVMRKIVENVSPHPNVIDLYDV-----YEDQNGVHLIL 121
             F        + D      EI ++ ++         +I LYD+         + ++++L
Sbjct: 63  --FE------DLIDCKRILREITILNRL-----KSDYIIRLYDLIIPDDLLKFDELYIVL 109

Query: 122 ELCSGGELFDRIVAQERYMEVGAAAVIR---------------QIAEGLAALHQANIVHR 166
           E+                 +     + +                +  G   +H++ I+HR
Sbjct: 110 EI----------------ADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHR 153

Query: 167 DLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSI-----------------D 209
           DLKP NCL LN  +D  +K+ DFGL+           +                      
Sbjct: 154 DLKPANCL-LN--QDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTS 210

Query: 210 YVS------PEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQK------QQMI 256
           +V       PE +L     +KS D+WS G I   LL+     I     +           
Sbjct: 211 HVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFP 270

Query: 257 MAGEFSFYEQTWKN-----------------------ISSSAKQLISSL----------- 282
           ++ + +  +   K+                             + I              
Sbjct: 271 LSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQK 330

Query: 283 ---------------LTVDPNRRPSAQELLNHPWVIGDSAKEEEMDAEIVSRLQSFNARR 327
                          L  +PN+R +  + L+HP++     K+ E  +     L  F+   
Sbjct: 331 YPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRKKKLENFSTKKIIL-PFDDWM 389

Query: 328 KL 329
            L
Sbjct: 390 VL 391

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score =  100 bits (251), Expect = 1e-23
 Identities = 63/235 (26%), Positives = 93/235 (39%), Gaps = 52/235 (22%)

Query: 17  ILGRGGFSVVRRGI--KKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTR 74
            LG G F  V          G    VA+K L+               +    + G+    
Sbjct: 38  DLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKA-------------DAGPQHRSGWK--- 81

Query: 75  KQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNG--VHLILELCSGGELFDR 132
                       EI ++R +      H ++I      ED     + L++E    G L D 
Sbjct: 82  -----------QEIDILRTLY-----HEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDY 125

Query: 133 IVAQERYMEVGAAAVI---RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDF 189
           +        +G A ++   +QI EG+A LH  + +HRDL   N L  NDR    +KI DF
Sbjct: 126 L----PRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRL---VKIGDF 178

Query: 190 GLS-----SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS 239
           GL+       E Y     G    + + +PE L + +    SD+WS GV LY LL+
Sbjct: 179 GLAKAVPEGHEYYRVREDGDS-PVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score =  101 bits (253), Expect = 1e-23
 Identities = 66/335 (19%), Positives = 116/335 (34%), Gaps = 95/335 (28%)

Query: 10  DEYEV-------TDILGRGGFSVVRRGI-----KKTCGETNQVAIKTLRRIGSTTPYGFP 57
            ++E           LG G F  V         K    E   VA+K L+           
Sbjct: 74  PKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLK----------- 122

Query: 58  GSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGV 117
               ++                      +E+ +M+ I      H N+I+L         +
Sbjct: 123 --DDATEKDLSDLV--------------SEMEMMKMI----GKHKNIINLLGACTQDGPL 162

Query: 118 HLILELCSGGELFD-----RIVAQERYMEVGAAAVI-----------RQIAEGLAALHQA 161
           ++I+E  S G L +     R    E   ++                  Q+A G+  L   
Sbjct: 163 YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ 222

Query: 162 NIVHRDLKPENCLFLNDREDSPLKIMDFGLS----SVEGYTDPVVGLFGSIDYVSPEALL 217
             +HRDL   N L +   E++ +KI DFGL+    +++ Y     G    + +++PEAL 
Sbjct: 223 KCIHRDLAARNVL-VT--ENNVMKIADFGLARDINNIDYYKKTTNGRL-PVKWMAPEALF 278

Query: 218 QDRITSKSDMWSLGVILY-ILLSGYPPFIAQSNRQKQQMIMAGE---------FSFYE-- 265
               T +SD+WS GV+++ I   G  P+      +  +++  G             Y   
Sbjct: 279 DRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMM 338

Query: 266 -QTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH 299
              W                  P++RP+ ++L+  
Sbjct: 339 RDCWHA---------------VPSQRPTFKQLVED 358

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 99.7 bits (249), Expect = 2e-23
 Identities = 56/236 (23%), Positives = 91/236 (38%), Gaps = 50/236 (21%)

Query: 16  DILGRGGFSVVRRGIKKTCGETN--QVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPT 73
             LG G F  V        G+    QVA+K+L+               S  +        
Sbjct: 27  RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKP-------------ESGGNHIADLK-- 71

Query: 74  RKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNG--VHLILELCSGGELFD 131
                        EI ++R +      H N++    +  +  G  + LI+E    G L +
Sbjct: 72  ------------KEIEILRNL-----YHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKE 114

Query: 132 RIVAQERYMEVGAAAVI---RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMD 188
            +   +   ++     +    QI +G+  L     VHRDL   N L  ++ +   +KI D
Sbjct: 115 YL--PKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQ---VKIGD 169

Query: 189 FGLSSV-----EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS 239
           FGL+       E YT         + + +PE L+Q +    SD+WS GV L+ LL+
Sbjct: 170 FGLTKAIETDKEYYTVKDDRDS-PVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224

>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B* Length = 155

 Score = 95.4 bits (238), Expect = 2e-23
 Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 5/157 (3%)

Query: 360 NEEEIQNLRIHFRTICANGDNATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDM 419
           + +EI+ L   F+ +  +    +LS  EE   ++      PL  R+ D+FD + +G VD 
Sbjct: 1   DADEIKRLGKRFKKLDLDNS-GSLS-VEE-FMSLPELQQNPLVQRVIDIFDTDGNGEVDF 57

Query: 420 REILCGFSSLRKSQG-DDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPG 478
           +E + G S        +  LR  F++YD+D+ G I+  E+  +L+ +  + L     +  
Sbjct: 58  KEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQ-Q 116

Query: 479 KLDEIFDLMDANNDGKVTFDEFRAAMQRDSSLQDVVL 515
            +D+     D + DG+++F+EF A +      + +V+
Sbjct: 117 IVDKTIINADKDGDGRISFEEFCAVVGGLDIHKKMVV 153

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score =  101 bits (252), Expect = 4e-23
 Identities = 74/429 (17%), Positives = 132/429 (30%), Gaps = 148/429 (34%)

Query: 2   GQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRG 61
                ++ D YE+  ++G G +  V     K       VAIK + R              
Sbjct: 45  PHSDWQIPDRYEIRHLIGTGSYGHVCEAYDKLEKR--VVAIKKILR-------------- 88

Query: 62  SSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDV-----YEDQNG 116
                          +     L   EI ++ ++      H +V+ + D+      E  + 
Sbjct: 89  ----------VFEDLIDCKRIL--REIAILNRL-----NHDHVVKVLDIVIPKDVEKFDE 131

Query: 117 VHLILELC---------SGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRD 167
           ++++LE+          +   L +  +   +        ++  +  G+  +H A I+HRD
Sbjct: 132 LYVVLEIADSDFKKLFRTPVYLTELHI---KT-------LLYNLLVGVKYVHSAGILHRD 181

Query: 168 LKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSI------------------- 208
           LKP NCL +N  +D  +K+ DFGL+    Y +                            
Sbjct: 182 LKPANCL-VN--QDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKR 238

Query: 209 ---DYVS------PEALLQDRITSKS-DMWSLGVILYILLSGYPPFIAQSNRQK------ 252
               +V       PE +L     +++ D+WS+G I   LL+     +A    +       
Sbjct: 239 QLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGS 298

Query: 253 ----------QQMIMAGEFSFY---------------EQTWKNISSS-AKQLISSL---- 282
                                                E+  + +    AK+ I       
Sbjct: 299 SCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKRE 358

Query: 283 ----------------------LTVDPNRRPSAQELLNHPWVIGDSAKEEEMDAEIVSRL 320
                                 L  +PN+R +  E L HP+       E E +A    RL
Sbjct: 359 GTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRIAEVETNATEKVRL 418

Query: 321 QSFNARRKL 329
             FN    +
Sbjct: 419 -PFNDWMNM 426

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 98.9 bits (247), Expect = 4e-23
 Identities = 67/336 (19%), Positives = 112/336 (33%), Gaps = 95/336 (28%)

Query: 9   TDEYEV-------TDILGRGGFSVVRRGIKK---TCGETNQVAIKTLRRIGSTTPYGFPG 58
             ++E           LGRG F  V                VA+K L+            
Sbjct: 19  ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKE----------- 67

Query: 59  SRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNG-V 117
             G++ S                    +E+ ++  I      H NV++L        G +
Sbjct: 68  --GATHSEHRALM--------------SELKILIHI----GHHLNVVNLLGACTKPGGPL 107

Query: 118 HLILELCSGGELFD-------RIVAQERYMEVGAAAVI---------RQIAEGLAALHQA 161
            +I+E C  G L           V  +   E      +          Q+A+G+  L   
Sbjct: 108 MVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR 167

Query: 162 NIVHRDLKPENCLFLNDREDSPLKIMDFGLS----SVEGYTDPVVGLFGSIDYVSPEALL 217
             +HRDL   N L     E + +KI DFGL+        Y          + +++PE + 
Sbjct: 168 KCIHRDLAARNILL---SEKNVVKICDFGLARDIYKDPDYVRKGDARL-PLKWMAPETIF 223

Query: 218 QDRITSKSDMWSLGVILY-ILLSGYPPFIA-QSNRQKQQMIMAGE---------FSFYE- 265
               T +SD+WS GV+L+ I   G  P+   + + +  + +  G             Y+ 
Sbjct: 224 DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQT 283

Query: 266 --QTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH 299
               W                 +P++RP+  EL+ H
Sbjct: 284 MLDCWHG---------------EPSQRPTFSELVEH 304

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 99.0 bits (247), Expect = 4e-23
 Identities = 54/262 (20%), Positives = 91/262 (34%), Gaps = 52/262 (19%)

Query: 17  ILGRGGFSVVRRGIKKTCGETN--QVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTR 74
            LG+G F  V        G+     VA+K L+  G      F                  
Sbjct: 30  QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDF------------------ 71

Query: 75  KQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNG--VHLILELCSGGELFDR 132
                       EI +++ +         ++    V        + L++E    G L D 
Sbjct: 72  ----------QREIQILKAL-----HSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDF 116

Query: 133 IVAQERYMEVGAAAVI---RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDF 189
           +  Q     + A+ ++    QI +G+  L     VHRDL   N L      ++ +KI DF
Sbjct: 117 L--QRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILV---ESEAHVKIADF 171

Query: 190 GLS-----SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPP 243
           GL+       + Y     G    I + +PE+L  +  + +SD+WS GV+LY L +     
Sbjct: 172 GLAKLLPLDKDYYVVREPGQS-PIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKS 230

Query: 244 FIAQSNRQKQQMIMAGEFSFYE 265
               +   +         +   
Sbjct: 231 CSPSAEFLRMMGCERDVPALSR 252

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 98.5 bits (246), Expect = 5e-23
 Identities = 63/338 (18%), Positives = 112/338 (33%), Gaps = 100/338 (29%)

Query: 10  DEYEV-------TDILGRGGFSVVRRG----IKKTCGETNQVAIKTLRRIGSTTPYGFPG 58
            ++E           LG G F  V       + K+      VA+K L+            
Sbjct: 16  HKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAM-TVAVKMLKP----------- 63

Query: 59  SRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVH 118
              +  + +                  +E+ V+  +      H N+++L           
Sbjct: 64  --SAHLTEREALM--------------SELKVLSYL----GNHMNIVNLLGACTIGGPTL 103

Query: 119 LILELCSGGELFD--RIVAQERYMEVGAAAVI----------------RQIAEGLAALHQ 160
           +I E C  G+L +  R           + A++                 Q+A+G+A L  
Sbjct: 104 VITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS 163

Query: 161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLS----SVEGYTDPVVGLFGSIDYVSPEAL 216
            N +HRDL   N L          KI DFGL+    +   Y          + +++PE++
Sbjct: 164 KNCIHRDLAARNIL---LTHGRITKICDFGLARDIKNDSNYVVKGNARL-PVKWMAPESI 219

Query: 217 LQDRITSKSDMWSLGVILY--ILLSGYP-PFIAQSNRQKQQMIMAG---------EFSFY 264
                T +SD+WS G+ L+    L   P P +   + +  +MI  G             Y
Sbjct: 220 FNCVYTFESDVWSYGIFLWELFSLGSSPYPGM-PVDSKFYKMIKEGFRMLSPEHAPAEMY 278

Query: 265 E---QTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH 299
           +     W                 DP +RP+ ++++  
Sbjct: 279 DIMKTCWDA---------------DPLKRPTFKQIVQL 301

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 97.0 bits (242), Expect = 1e-22
 Identities = 53/235 (22%), Positives = 90/235 (38%), Gaps = 51/235 (21%)

Query: 17  ILGRGGFSVVRRGIKKTCGETN--QVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTR 74
            LG+G F  V         +     VA+K L+                S+   +      
Sbjct: 17  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---------------HSTEEHL------ 55

Query: 75  KQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDV--YEDQNGVHLILELCSGGELFDR 132
                       EI +++ +      H N++    V     +  + LI+E    G L D 
Sbjct: 56  ------RDFER-EIEILKSL-----QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDY 103

Query: 133 IVAQERYMEVGAAAVI---RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDF 189
           +  Q+    +    ++    QI +G+  L     +HRDL   N L      ++ +KI DF
Sbjct: 104 L--QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDF 158

Query: 190 GLS-----SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS 239
           GL+       E +     G    I + +PE+L + + +  SD+WS GV+LY L +
Sbjct: 159 GLTKVLPQDKEFFKVKEPGES-PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 97.4 bits (243), Expect = 2e-22
 Identities = 54/235 (22%), Positives = 90/235 (38%), Gaps = 51/235 (21%)

Query: 17  ILGRGGFSVVRRGIKKTCGETN--QVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTR 74
            LG+G F  V         +     VA+K L+                S+   +      
Sbjct: 48  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---------------HSTEEHL------ 86

Query: 75  KQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDV--YEDQNGVHLILELCSGGELFDR 132
                       EI +++ +      H N++    V     +  + LI+E    G L D 
Sbjct: 87  ------RDFER-EIEILKSL-----QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDY 134

Query: 133 IVAQERYMEVGAAAVI---RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDF 189
           +  Q+    +    ++    QI +G+  L     +HRDL   N L      ++ +KI DF
Sbjct: 135 L--QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDF 189

Query: 190 GLS-----SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS 239
           GL+       E Y     G    I + +PE+L + + +  SD+WS GV+LY L +
Sbjct: 190 GLTKVLPQDKEYYKVKEPGES-PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 95.4 bits (238), Expect = 4e-22
 Identities = 67/318 (21%), Positives = 116/318 (36%), Gaps = 87/318 (27%)

Query: 18  LGRGGFSVVRRGIKKTC---GETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTR 74
           LG   F  V +G         +T  VAIKTL+               +    +  F    
Sbjct: 17  LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKD-------------KAEGPLREEFR--- 60

Query: 75  KQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFD--- 131
                      +E ++  ++      HPNV+ L  V      + +I   CS G+L +   
Sbjct: 61  -----------HEAMLRARL-----QHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLV 104

Query: 132 --RIVAQERYMEVGAAA-----------VIRQIAEGLAALHQANIVHRDLKPENCLFLND 178
                +     +                ++ QIA G+  L   ++VH+DL   N L +  
Sbjct: 105 MRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVL-VY- 162

Query: 179 REDSPLKIMDFGLS----SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVIL 234
            +   +KI D GL     + + Y      L   I +++PEA++  + +  SD+WS GV+L
Sbjct: 163 -DKLNVKISDLGLFREVYAADYYKLLGNSLL-PIRWMAPEAIMYGKFSIDSDIWSYGVVL 220

Query: 235 YILLS-GYPPFIAQSNRQKQQMIMAGEF---------SFYE---QTWKNISSSAKQLISS 281
           + + S G  P+   SN+   +MI   +            Y    + W             
Sbjct: 221 WEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNE----------- 269

Query: 282 LLTVDPNRRPSAQELLNH 299
                P+RRP  +++ + 
Sbjct: 270 ----FPSRRPRFKDIHSR 283

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 94.6 bits (236), Expect = 1e-21
 Identities = 65/318 (20%), Positives = 114/318 (35%), Gaps = 90/318 (28%)

Query: 18  LGRGGFSVVRRG----IKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPT 73
           LG G F  V       +  T  +   VA+K L+                + +++  F   
Sbjct: 23  LGEGAFGKVFLAECYNLSPTKDKM-LVAVKALK--------------DPTLAARKDFQ-- 65

Query: 74  RKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFD-- 131
                        E  ++  +      H +++  Y V  D + + ++ E    G+L    
Sbjct: 66  ------------REAELLTNLQ-----HEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFL 108

Query: 132 ---RIVAQERYMEVGAAA-----------VIRQIAEGLAALHQANIVHRDLKPENCLFLN 177
                 A          A           +  QIA G+  L   + VHRDL   NCL   
Sbjct: 109 RAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGA 168

Query: 178 DREDSPLKIMDFGLS----SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVI 233
           +     +KI DFG+S    S + Y      +   I ++ PE+++  + T++SD+WS GVI
Sbjct: 169 NLL---VKIGDFGMSRDVYSTDYYRVGGHTML-PIRWMPPESIMYRKFTTESDVWSFGVI 224

Query: 234 LYILLS-GYPPFIAQSNRQKQQMIMAGEF---------SFYE---QTWKNISSSAKQLIS 280
           L+ + + G  P+   SN +  + I  G             Y+     W+           
Sbjct: 225 LWEIFTYGKQPWFQLSNTEVIECITQGRVLERPRVCPKEVYDVMLGCWQR---------- 274

Query: 281 SLLTVDPNRRPSAQELLN 298
                +P +R + +E+  
Sbjct: 275 -----EPQQRLNIKEIYK 287

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 94.6 bits (236), Expect = 1e-21
 Identities = 73/342 (21%), Positives = 117/342 (34%), Gaps = 104/342 (30%)

Query: 10  DEYEV-------TDILGRGGFSVVRRG----IKKTCGETNQVAIKTLRRIGSTTPYGFPG 58
            ++E           LG G F  V +     +K   G T  VA+K L+            
Sbjct: 16  PKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYT-TVAVKMLKE----------- 63

Query: 59  SRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVH 118
              +S S                    +E  V++++      HP+VI LY        + 
Sbjct: 64  --NASPSELRDLL--------------SEFNVLKQV-----NHPHVIKLYGACSQDGPLL 102

Query: 119 LILELCSGGELFD-----RIVAQERYMEVGAAAVI-------------------RQIAEG 154
           LI+E    G L       R V        G+                        QI++G
Sbjct: 103 LIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQG 162

Query: 155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS----SVEGYTDPVVGLFGSIDY 210
           +  L +  +VHRDL   N L +   E   +KI DFGLS      + Y     G    + +
Sbjct: 163 MQYLAEMKLVHRDLAARNIL-VA--EGRKMKISDFGLSRDVYEEDSYVKRSQGRI-PVKW 218

Query: 211 VSPEALLQDRITSKSDMWSLGVILY-ILLSGYPPFIAQSNRQKQQMIMAGE--------- 260
           ++ E+L     T++SD+WS GV+L+ I+  G  P+      +   ++  G          
Sbjct: 219 MAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCS 278

Query: 261 FSFYE---QTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH 299
              Y    Q WK                +P++RP   ++   
Sbjct: 279 EEMYRLMLQCWKQ---------------EPDKRPVFADISKD 305

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 93.9 bits (234), Expect = 2e-21
 Identities = 64/317 (20%), Positives = 112/317 (35%), Gaps = 87/317 (27%)

Query: 18  LGRGGFSVVRRGIKKTC---GETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTR 74
           LG G F  V            +   VA+K L+               +S S++  F    
Sbjct: 49  LGEGAFGKVFLAECHNLLPEQDKMLVAVKALK--------------EASESARQDFQ--- 91

Query: 75  KQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFD--- 131
                       E  ++  +      H +++  + V  +   + ++ E    G+L     
Sbjct: 92  -----------REAELLTMLQ-----HQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLR 135

Query: 132 --RIVAQERYMEVGAAA----------VIRQIAEGLAALHQANIVHRDLKPENCLFLNDR 179
                A+        A           V  Q+A G+  L   + VHRDL   NCL +   
Sbjct: 136 SHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCL-VG-- 192

Query: 180 EDSPLKIMDFGLS----SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY 235
           +   +KI DFG+S    S + Y      +   I ++ PE++L  + T++SD+WS GV+L+
Sbjct: 193 QGLVVKIGDFGMSRDIYSTDYYRVGGRTML-PIRWMPPESILYRKFTTESDVWSFGVVLW 251

Query: 236 ILLS-GYPPFIAQSNRQKQQMIMAGEF---------SFYE---QTWKNISSSAKQLISSL 282
            + + G  P+   SN +    I  G             Y      W+             
Sbjct: 252 EIFTYGKQPWYQLSNTEAIDCITQGRELERPRACPPEVYAIMRGCWQ------------- 298

Query: 283 LTVDPNRRPSAQELLNH 299
              +P +R S +++   
Sbjct: 299 --REPQQRHSIKDVHAR 313

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 94.6 bits (235), Expect = 3e-21
 Identities = 71/394 (18%), Positives = 124/394 (31%), Gaps = 134/394 (34%)

Query: 8   LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQ 67
               Y V   LG G FS V             VA+K ++     T               
Sbjct: 35  FNGRYHVIRKLGWGHFSTVWLS--WDIQGKKFVAMKVVKSAEHYT--------------- 77

Query: 68  IGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPN---VIDLYDVYEDQ--NGVH--LI 120
                        +  L +EI +++ +  +    PN   V+ L D ++    NG H  ++
Sbjct: 78  -------------ETAL-DEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMV 123

Query: 121 LEL--CSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALH-QANIVHRDLKPENCLF-- 175
            E+      +   +   Q   +      +I+Q+ +GL  LH +  I+H D+KPEN L   
Sbjct: 124 FEVLGHHLLKWIIKSNYQGLPLPC-VKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSV 182

Query: 176 --------------------------------------------LNDREDSPLKIMDFGL 191
                                                         + E   +KI D G 
Sbjct: 183 NEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGN 242

Query: 192 SSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQ 251
           +              +  Y S E L+     + +D+WS   + + L +G   F   S  +
Sbjct: 243 ACWVH--KHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEE 300

Query: 252 K------------------QQMIMAGEFS--FYEQ--TWKNISS---------------- 273
                              +++I+AG++S  F+ +    K+I+                 
Sbjct: 301 YTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEW 360

Query: 274 ------SAKQLISSLLTVDPNRRPSAQELLNHPW 301
                      +  +L + P +R +A E L HPW
Sbjct: 361 SQEEAAGFTDFLLPMLELIPEKRATAAECLRHPW 394

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 93.3 bits (232), Expect = 5e-21
 Identities = 59/334 (17%), Positives = 109/334 (32%), Gaps = 83/334 (24%)

Query: 6   RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSS 65
           R +     + + +G+G F  V RG  K  GE   VA+K                      
Sbjct: 38  RTIARTIVLQESIGKGRFGEVWRG--KWRGEE--VAVK---------------------- 71

Query: 66  SQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVH----LIL 121
                F +R++          EI     +      H N++         NG      L+ 
Sbjct: 72  ----IFSSREE---RSWFREAEIYQTVML-----RHENILGFIAADNKDNGTWTQLWLVS 119

Query: 122 ELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQA--------NIVHRDLKPENC 173
           +    G LFD  + +      G   +    A GLA LH           I HRDLK +N 
Sbjct: 120 DYHEHGSLFD-YLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNI 178

Query: 174 LFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF-----GSIDYVSPEALLQDRITS----- 223
           L    +++    I D GL+         + +      G+  Y++PE L            
Sbjct: 179 LV---KKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESF 235

Query: 224 -KSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNI----------- 271
            ++D++++G++ + +           + Q     +       E+  K +           
Sbjct: 236 KRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPN 295

Query: 272 ---SSSAKQLISSLLT----VDPNRRPSAQELLN 298
              S  A ++++ ++      +   R +A  +  
Sbjct: 296 RWQSCEALRVMAKIMRECWYANGAARLTALRIKK 329

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 92.0 bits (229), Expect = 7e-21
 Identities = 57/334 (17%), Positives = 109/334 (32%), Gaps = 85/334 (25%)

Query: 6   RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSS 65
           R +  +  + + +G+G +  V RG     GE   VA+K                      
Sbjct: 4   RTVARDITLLECVGKGRYGEVWRG--SWQGEN--VAVK---------------------- 37

Query: 66  SQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVH----LIL 121
                F +R +          E+     +      H N++                 LI 
Sbjct: 38  ----IFSSRDE---KSWFRETELYNTVML-----RHENILGFIASDMTSRHSSTQLWLIT 85

Query: 122 ELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALH--------QANIVHRDLKPENC 173
                G L+D +             ++  IA GLA LH        +  I HRDLK +N 
Sbjct: 86  HYHEMGSLYDYLQLTTLDTVS-CLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNI 144

Query: 174 LFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF-----GSIDYVSPEALLQDRI------- 221
           L    +++    I D GL+ +   +   + +      G+  Y++PE +L + I       
Sbjct: 145 L---VKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPE-VLDETIQVDCFDS 200

Query: 222 TSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNI---------- 271
             + D+W+ G++L+ +           + +     +      +E   K +          
Sbjct: 201 YKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIP 260

Query: 272 ----SSSAKQLISSLLT----VDPNRRPSAQELL 297
               S      ++ L+      +P+ R +A  + 
Sbjct: 261 NRWFSDPTLTSLAKLMKECWYQNPSARLTALRIK 294

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 92.4 bits (230), Expect = 9e-21
 Identities = 70/328 (21%), Positives = 111/328 (33%), Gaps = 96/328 (29%)

Query: 17  ILGRGGFSVVRRGI---KKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPT 73
           +LG G F  V           G + QVA+K L+               + SS +      
Sbjct: 52  VLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKE-------------KADSSEREALM-- 96

Query: 74  RKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFD-- 131
                       +E+ +M ++      H N+++L         ++LI E C  G+L +  
Sbjct: 97  ------------SELKMMTQL----GSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYL 140

Query: 132 ---RIVAQERYMEVGAAAVI------------------RQIAEGLAALHQANIVHRDLKP 170
              R    E  +E      +                   Q+A+G+  L   + VHRDL  
Sbjct: 141 RSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAA 200

Query: 171 ENCLFLNDREDSPLKIMDFGLS----SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSD 226
            N L         +KI DFGL+    S   Y          + +++PE+L +   T KSD
Sbjct: 201 RNVL---VTHGKVVKICDFGLARDIMSDSNYVVRGNARL-PVKWMAPESLFEGIYTIKSD 256

Query: 227 MWSLGVILY--ILLSGYP-PFIAQSNRQKQQMIMAG---------EFSFYE---QTWKNI 271
           +WS G++L+    L   P P I   +    ++I  G             Y      W   
Sbjct: 257 VWSYGILLWEIFSLGVNPYPGI-PVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWA-- 313

Query: 272 SSSAKQLISSLLTVDPNRRPSAQELLNH 299
                         D  +RPS   L + 
Sbjct: 314 -------------FDSRKRPSFPNLTSF 328

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 92.4 bits (230), Expect = 1e-20
 Identities = 61/275 (22%), Positives = 103/275 (37%), Gaps = 70/275 (25%)

Query: 18  LGRGGFSVVRRG----IKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPT 73
           +G G F  V +     +      T  VA+K L+               +S+  Q  F   
Sbjct: 55  IGEGAFGRVFQARAPGLLPYEPFT-MVAVKMLKE-------------EASADMQADFQ-- 98

Query: 74  RKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFD-- 131
                        E  +M +       +PN++ L  V      + L+ E  + G+L +  
Sbjct: 99  ------------REAALMAEFD-----NPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFL 141

Query: 132 ---RIVAQERYMEVGAAAVI-------------------RQIAEGLAALHQANIVHRDLK 169
                           +                      RQ+A G+A L +   VHRDL 
Sbjct: 142 RSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLA 201

Query: 170 PENCLFLNDREDSPLKIMDFGLS----SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKS 225
             NCL +   E+  +KI DFGLS    S + Y          I ++ PE++  +R T++S
Sbjct: 202 TRNCL-VG--ENMVVKIADFGLSRNIYSADYYKADGNDAI-PIRWMPPESIFYNRYTTES 257

Query: 226 DMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAG 259
           D+W+ GV+L+ + S G  P+   ++ +    +  G
Sbjct: 258 DVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDG 292

>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A Length = 186

 Score = 87.9 bits (218), Expect = 2e-20
 Identities = 25/168 (14%), Positives = 60/168 (35%), Gaps = 23/168 (13%)

Query: 356 SHDLNEEEIQNLRIHFRTICANGDNA-TLSEFEEVLKAMNMSS---------LVPLAPRI 405
           +       ++ ++   + +   GD   +  ++E +   +   +               R+
Sbjct: 5   TESERAYHLRKMKTRMQRVDVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQEFLRV 64

Query: 406 FDLFDNNRDGTVDMREILCGFS-SLRKSQGDDA------LRLCFQMYDIDRSGCITKEEV 458
            D         + + E     + SL K +G++         + +   D D+ G ++  E 
Sbjct: 65  ADQLGLAPGVRISVEEAAVNATDSLLKMKGEEKAMAVIQSLIMYDCIDTDKDGYVSLPEF 124

Query: 459 ASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR 506
            + L+A+  D          K    F+ +D N +G+++ DEF   +  
Sbjct: 125 KAFLQAVGPDL------TDDKAITCFNTLDFNKNGQISRDEFLVTVND 166

>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A Length = 186

 Score = 59.4 bits (144), Expect = 2e-10
 Identities = 9/78 (11%), Positives = 25/78 (32%), Gaps = 3/78 (3%)

Query: 438 LRLCFQMYDIDRSGCITKEEVASMLRALPDDC-LPVDITEPGK--LDEIFDLMDANNDGK 494
           ++   Q  D+   G I++E+   +   +     L  +  E  +     + D +      +
Sbjct: 16  MKTRMQRVDVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQEFLRVADQLGLAPGVR 75

Query: 495 VTFDEFRAAMQRDSSLQD 512
           ++ +E             
Sbjct: 76  ISVEEAAVNATDSLLKMK 93

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 89.4 bits (222), Expect = 8e-20
 Identities = 51/265 (19%), Positives = 87/265 (32%), Gaps = 78/265 (29%)

Query: 9   TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQI 68
           +   ++ ++  RG F  V +   +   E   VA+K                       + 
Sbjct: 23  SMPLQLLEVKARGRFGCVWKA--QLLNEY--VAVKIF-----------------PIQDKQ 61

Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDL--YDVYEDQNGVH--LILELC 124
            +    +           E+  +  +      H N++     +       V   LI    
Sbjct: 62  SWQ--NEY----------EVYSLPGM-----KHENILQFIGAEKRGTSVDVDLWLITAFH 104

Query: 125 SGGELFD----RIVAQERYMEVGAAAVIRQIAEGLAALHQA----------NIVHRDLKP 170
             G L D     +V+      +        +A GLA LH+            I HRD+K 
Sbjct: 105 EKGSLSDFLKANVVSWNELCHI-----AETMARGLAYLHEDIPGLKDGHKPAISHRDIKS 159

Query: 171 ENCLFLNDREDSPLKIMDFGLS------SVEGYTDPVVGLFGSIDYVSPEAL-----LQD 219
           +N L    + +    I DFGL+         G T   VG      Y++PE L      Q 
Sbjct: 160 KNVL---LKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRR---YMAPEVLEGAINFQR 213

Query: 220 RITSKSDMWSLGVILYILLSGYPPF 244
               + DM+++G++L+ L S     
Sbjct: 214 DAFLRIDMYAMGLVLWELASRCTAA 238

>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum} Length = 180

 Score = 85.8 bits (213), Expect = 1e-19
 Identities = 35/206 (16%), Positives = 70/206 (33%), Gaps = 42/206 (20%)

Query: 312 MDAEIVSRLQSFNARRKLRAAA---IASVLSSTIFLRRTKKLKNLLGSHDLNEEEIQNLR 368
           +   +++ ++S+     +R      +A  LS                   +    I+ + 
Sbjct: 2   ISPNVLNNMKSYMKHSNIRNIIINIMAHELS-------------------VINNHIKYIN 42

Query: 369 IHFRTICANGDNA-TLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFS 427
             F  +  N + + +  E   VL ++ +        RI    D N  G +   E + G  
Sbjct: 43  ELFYKLDTNHNGSLSHREIYTVLASVGIKK--WDINRILQALDINDRGNITYTEFMAGCY 100

Query: 428 SLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLM 487
             +  +    L+  F   D D  G I+K ++ S++     D           +D  F  +
Sbjct: 101 RWKNIE-STFLKAAFNKIDKDEDGYISKSDIVSLVHDKVLDN--------NDIDNFFLSV 151

Query: 488 DANNDG--------KVTFDEFRAAMQ 505
            +   G        K++F EF+  M 
Sbjct: 152 HSIKKGIPREHIINKISFQEFKDYML 177

>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum} Length = 180

 Score = 59.6 bits (145), Expect = 1e-10
 Identities = 15/75 (20%), Positives = 35/75 (46%), Gaps = 8/75 (10%)

Query: 438 LRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTF 497
           +   F   D + +G ++  E+ ++L ++        I +   ++ I   +D N+ G +T+
Sbjct: 41  INELFYKLDTNHNGSLSHREIYTVLASV-------GIKKW-DINRILQALDINDRGNITY 92

Query: 498 DEFRAAMQRDSSLQD 512
            EF A   R  +++ 
Sbjct: 93  TEFMAGCYRWKNIES 107

>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum} Length = 180

 Score = 39.6 bits (93), Expect = 7e-04
 Identities = 8/37 (21%), Positives = 17/37 (45%)

Query: 470 LPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR 506
           L V       ++E+F  +D N++G ++  E    +  
Sbjct: 31  LSVINNHIKYINELFYKLDTNHNGSLSHREIYTVLAS 67

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 88.6 bits (220), Expect = 2e-19
 Identities = 59/338 (17%), Positives = 108/338 (31%), Gaps = 89/338 (26%)

Query: 3   QETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGS 62
           Q T  +  + ++   +G+G +  V  G  K  GE   VA+K                   
Sbjct: 32  QRT--IAKQIQMVKQIGKGRYGEVWMG--KWRGEK--VAVKVF----------------- 68

Query: 63  SSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVH---- 118
             +++   +               EI     +      H N++          G      
Sbjct: 69  -FTTEEASWFRET-----------EIYQTVLM-----RHENILGFIAADIKGTGSWTQLY 111

Query: 119 LILELCSGGELFDRIVAQERYMEVGAAAVI-RQIAEGLAALH--------QANIVHRDLK 169
           LI +    G L+D +  +   ++  +   +      GL  LH        +  I HRDLK
Sbjct: 112 LITDYHENGSLYDYL--KSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLK 169

Query: 170 PENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLF-----GSIDYVSPEALLQDRI--- 221
            +N L    +++    I D GL+         V +      G+  Y+ PE +L + +   
Sbjct: 170 SKNILV---KKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPE-VLDESLNRN 225

Query: 222 ----TSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNI------ 271
                  +DM+S G+IL+ +             Q     +      YE   + +      
Sbjct: 226 HFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLR 285

Query: 272 --------SSSAKQLISSLLT----VDPNRRPSAQELL 297
                   S    + +  L+T     +P  R +A  + 
Sbjct: 286 PSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVK 323

>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens} Length = 204

 Score = 84.7 bits (210), Expect = 4e-19
 Identities = 35/168 (20%), Positives = 61/168 (36%), Gaps = 5/168 (2%)

Query: 348 KKLKNLLGSHDLNEEEIQNLRIHFRTICANGDNA-TLSEFEEVLKAMNMSSLVPLAPRIF 406
           +KL+            IQ L   FR +  +G  +    EF + L  + +      A  + 
Sbjct: 22  EKLRAQC--LSRGASGIQGLARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVC 79

Query: 407 DLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALP 466
             +D N  GT+D+ E L           +  +   F   D    G +T +++  +     
Sbjct: 80  RKWDRNGSGTLDLEEFLRALRPPMSQAREAVIAAAFAKLDRSGDGVVTVDDLRGVYSGRA 139

Query: 467 D-DCLPVDITEPGKLDEIFDLMDAN-NDGKVTFDEFRAAMQRDSSLQD 512
                  + TE   L    D  D++  DG+VT  EF+      S+  +
Sbjct: 140 HPKVRSGEWTEDEVLRRFLDNFDSSEKDGQVTLAEFQDYYSGVSASMN 187

>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii} Length = 191

 Score = 83.9 bits (208), Expect = 6e-19
 Identities = 44/209 (21%), Positives = 76/209 (36%), Gaps = 37/209 (17%)

Query: 310 EEMDAEIVSRLQSFNARRKLRAAAIASVLSSTIFLRRTKKLKNLLGSHDLNEEEIQNLRI 369
           +      +  ++ F + +KL  AA+                   +GS     EE + L  
Sbjct: 2   KHALTGALGNMKKFQSSQKLAQAAM-----------------LFMGSKLTTLEETKELTQ 44

Query: 370 HFRTICANGDNA-TLSEFEEVLKAMNMSSLVPLAP-----------RIFDLFDNNRDGTV 417
            FR +  NGD      E  E  + +       ++             I    D +R+G +
Sbjct: 45  IFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYI 104

Query: 418 DMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEP 477
           +  E +      +     + L   FQ +D D SG IT EE+  +           ++ + 
Sbjct: 105 EYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFGVT-------EVDD- 156

Query: 478 GKLDEIFDLMDANNDGKVTFDEFRAAMQR 506
               ++    D NNDG+V F+EF   MQ+
Sbjct: 157 ETWHQVLQECDKNNDGEVDFEEFVEMMQK 185

>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii} Length = 191

 Score = 42.7 bits (101), Expect = 8e-05
 Identities = 11/46 (23%), Positives = 20/46 (43%)

Query: 476 EPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDSSLQDVVLSSLRQQ 521
           E  +L +IF  +D N DG++   E     ++    +   +S L   
Sbjct: 38  ETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSS 83

>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi} Length = 219

 Score = 84.6 bits (209), Expect = 6e-19
 Identities = 31/166 (18%), Positives = 46/166 (27%), Gaps = 20/166 (12%)

Query: 356 SHDLNEEEIQNLRIHFRTICANGDNA-TLSEFEEVLKAMNMSSLVPLAPRIFDLF----- 409
             +   E  Q     F+    N        E       + +  L     R+ D+      
Sbjct: 39  PREKTAEAKQRRIELFKKFDKNETGKLCYDEVYSGC--LEVLKLDEFTSRVRDITKRAFD 96

Query: 410 -------DNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASML 462
                       G+ D  E L     L        L + F   D   +  + +EE    +
Sbjct: 97  KSRTLGSKLENKGSEDFVEFLEFRLMLCYIYDFFELTVMFDEIDASGNMLVDEEEFKRAV 156

Query: 463 RALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDS 508
             L      V+         +F  +D N  G VTFDEF A      
Sbjct: 157 PKLEAWGAKVE-----DPAALFKELDKNGTGSVTFDEFAAWASAVK 197

>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi} Length = 219

 Score = 43.3 bits (102), Expect = 6e-05
 Identities = 14/82 (17%), Positives = 24/82 (29%), Gaps = 4/82 (4%)

Query: 435 DDALRLCFQMYDIDRSGCITKEEV-ASMLRALPDDCLPVDITE---PGKLDEIFDLMDAN 490
                  F+ +D + +G +  +EV +  L  L  D     + +                 
Sbjct: 47  KQRRIELFKKFDKNETGKLCYDEVYSGCLEVLKLDEFTSRVRDITKRAFDKSRTLGSKLE 106

Query: 491 NDGKVTFDEFRAAMQRDSSLQD 512
           N G   F EF         + D
Sbjct: 107 NKGSEDFVEFLEFRLMLCYIYD 128

>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola} Length = 208

 Score = 81.4 bits (201), Expect = 6e-18
 Identities = 21/170 (12%), Positives = 49/170 (28%), Gaps = 29/170 (17%)

Query: 357 HDLNEEEIQNLRIHFRTICANGDNA-TLSEFEEVLKAM---------NMSSLVPLAPRIF 406
            DL+ + +  L   F T   + D    + E       M          +  +       F
Sbjct: 28  EDLHPKMLSRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNATDEQVEKMRDAVRVFF 87

Query: 407 DLFDNNRDGTVDMREILCGFSSLRKSQGDDA-----------LRLCFQMYDIDRSGCITK 455
                     +   + +       +++ +                 + + D D  G +  
Sbjct: 88  LHKGVEPVNGLLREDWVEANRVFAEAERERERRGEPSLIALLSNSYYDVLDDDGDGTVDV 147

Query: 456 EEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQ 505
           +E+ +M++A        D+ +       F+  D +  GK+   E     +
Sbjct: 148 DELKTMMKAF-------DVPQE-AAYTFFEKADTDKSGKLERTELVHLFR 189

>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola} Length = 208

 Score = 59.4 bits (144), Expect = 2e-10
 Identities = 11/75 (14%), Positives = 24/75 (32%), Gaps = 9/75 (12%)

Query: 438 LRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEP------GKLDEIFDLMDANN 491
           L   F  +D+D  G +  +EV      +      V+ T+         +   F       
Sbjct: 38  LYKRFDTFDLDSDGKMEMDEVLYWPDRM---RQLVNATDEQVEKMRDAVRVFFLHKGVEP 94

Query: 492 DGKVTFDEFRAAMQR 506
              +  +++  A + 
Sbjct: 95  VNGLLREDWVEANRV 109

>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola} Length = 208

 Score = 41.7 bits (98), Expect = 2e-04
 Identities = 10/28 (35%), Positives = 15/28 (53%)

Query: 479 KLDEIFDLMDANNDGKVTFDEFRAAMQR 506
           +L + FD  D ++DGK+  DE      R
Sbjct: 37  RLYKRFDTFDLDSDGKMEMDEVLYWPDR 64

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 83.7 bits (207), Expect = 7e-18
 Identities = 66/341 (19%), Positives = 106/341 (31%), Gaps = 94/341 (27%)

Query: 9   TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQI 68
            D  ++ +++GRG +  V +G          VA+K                   S +++ 
Sbjct: 12  LDNLKLLELIGRGRYGAVYKG--SLDERP--VAVKVF-----------------SFANRQ 50

Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLY--DVYEDQNGVH---LILEL 123
            F               NE  + R  V  +  H N+      D     +G     L++E 
Sbjct: 51  NFI--------------NEKNIYR--VPLME-HDNIARFIVGDERVTADGRMEYLLVMEY 93

Query: 124 CSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQA---------NIVHRDLKPENCL 174
              G L    ++      V +  +   +  GLA LH            I HRDL   N L
Sbjct: 94  YPNGSLXK-YLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVL 152

Query: 175 FLNDREDSPLKIMDFGLSSVEGYTDPVVGLF---------GSIDYVSPEAL-------LQ 218
             ND       I DFGLS        V             G+I Y++PE L         
Sbjct: 153 VKNDGT---CVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDX 209

Query: 219 DRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMI---MAGEFSFYEQTWK------ 269
           +    + DM++LG+I + +           +  + QM      G    +E          
Sbjct: 210 ESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREK 269

Query: 270 ---------NISSSAKQLISSLLTV----DPNRRPSAQELL 297
                      +S A + +   +      D   R +AQ   
Sbjct: 270 QRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAE 310

>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii} Length = 191

 Score = 80.3 bits (198), Expect = 1e-17
 Identities = 30/179 (16%), Positives = 52/179 (29%), Gaps = 34/179 (18%)

Query: 354 LGSHDLNEEEIQNLRIHFRTIC-ANGDNA-TLSEFEEVLKAM-NMSSLVPLAPR------ 404
           + +H L++ +   +   F T    N D      +FE  +K + N+ S      +      
Sbjct: 1   MAAHQLSDFQRNKILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARA 60

Query: 405 --------IFDLFDNNRDGTVDMREILCGFSSLRKSQGDD---------ALRLCFQMYDI 447
                   +    D N D  V   E L  ++   KS              +   F + D 
Sbjct: 61  TLKLIWDGLRKYADENEDEQVTKEEWLKMWAECVKSVEKGESLPEWLTKYMNFMFDVNDT 120

Query: 448 DRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR 506
                I K E +++  +                D  FD +       VT + F      
Sbjct: 121 SGDNIIDKHEYSTVYMSYGIP--------KSDCDAAFDTLSDGGKTMVTREIFARLWTE 171

>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii} Length = 191

 Score = 54.5 bits (131), Expect = 9e-09
 Identities = 12/80 (15%), Positives = 24/80 (30%), Gaps = 9/80 (11%)

Query: 442 FQMYDIDRSGCITKEEVASMLRAL-------PDDCLPVDITE--PGKLDEIFDLMDANND 492
              YD +  G I  ++    ++ +        D     +         D +    D N D
Sbjct: 19  NTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARATLKLIWDGLRKYADENED 78

Query: 493 GKVTFDEFRAAMQRDSSLQD 512
            +VT +E+           +
Sbjct: 79  EQVTKEEWLKMWAECVKSVE 98

>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A Length = 174

 Score = 79.0 bits (195), Expect = 2e-17
 Identities = 30/162 (18%), Positives = 54/162 (33%), Gaps = 25/162 (15%)

Query: 360 NEEEIQNLRIHFRTICANGDNA-TLSEFEEVLKAM--NMSSLVPLAPRIFDLF------- 409
           ++  +Q ++ +F  I  + D A T  +FE + +            A  + D         
Sbjct: 1   SDLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNF 60

Query: 410 --DNNRDGTVDMREILCGFSSLRKSQGDD-----ALRLCFQMYDIDRSGCITKEEVASML 462
                    +D    +     + K+          L L F+  D +    I+++E     
Sbjct: 61  LTAVAGGKGIDETTFINSMKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFF 120

Query: 463 RALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAM 504
             L  D               FD +D NNDG ++ +EF  A 
Sbjct: 121 GMLGLD--------KTMAPASFDAIDTNNDGLLSLEEFVIAG 154

>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A Length = 174

 Score = 66.3 bits (162), Expect = 5e-13
 Identities = 18/114 (15%), Positives = 36/114 (31%), Gaps = 14/114 (12%)

Query: 404 RIFDLFDNNRDGTVDMREILCGFSSLRKSQGD---------DALRLCFQMY--DIDRSGC 452
             F+  D ++DG +   +         K             D+L   +  +   +     
Sbjct: 10  TYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVAGGKG 69

Query: 453 ITKEE-VASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQ 505
           I +   + SM   + +      +  P  L   F  +D N D  ++ DE+     
Sbjct: 70  IDETTFINSMKEMVKNPEAKSVVEGP--LPLFFRAVDTNEDNNISRDEYGIFFG 121

>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A Length = 174

 Score = 55.9 bits (135), Expect = 2e-09
 Identities = 11/81 (13%), Positives = 24/81 (29%), Gaps = 7/81 (8%)

Query: 438 LRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLM------DANN 491
           ++  F   D D+ G IT+ +  SM      +   +       L +    +          
Sbjct: 8   MKTYFNRIDFDKDGAITRMDFESMAERFAKE-SEMKAEHAKVLMDSLTGVWDNFLTAVAG 66

Query: 492 DGKVTFDEFRAAMQRDSSLQD 512
              +    F  +M+      +
Sbjct: 67  GKGIDETTFINSMKEMVKNPE 87

>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A Length = 174

 Score = 46.6 bits (111), Expect = 3e-06
 Identities = 19/126 (15%), Positives = 32/126 (25%), Gaps = 14/126 (11%)

Query: 350 LKNLLGSHDLNEEEIQNLRIHFRTIC------ANGDNA-TLSEFEEVLKAMNMSS----- 397
            +      ++  E  + L      +         G      + F   +K M  +      
Sbjct: 32  AERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVAGGKGIDETTFINSMKEMVKNPEAKSV 91

Query: 398 LVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEE 457
           +    P  F   D N D  +   E    F  L            F   D +  G ++ EE
Sbjct: 92  VEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLGLD--KTMAPASFDAIDTNNDGLLSLEE 149

Query: 458 VASMLR 463
                 
Sbjct: 150 FVIAGS 155

>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A Length = 174

 Score = 43.9 bits (104), Expect = 3e-05
 Identities = 8/28 (28%), Positives = 16/28 (57%)

Query: 479 KLDEIFDLMDANNDGKVTFDEFRAAMQR 506
           K+   F+ +D + DG +T  +F +  +R
Sbjct: 7   KMKTYFNRIDFDKDGAITRMDFESMAER 34

>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana} Length = 166

 Score = 77.6 bits (192), Expect = 5e-17
 Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 15/156 (9%)

Query: 357 HDLNEEEIQNLRIHFRTICANGDNA-TLSEFEEVLKAMNMSSLVPLAPRIFDLF---DNN 412
             L+EEEI  L+  F  I A+     T  E +  LK +  +        I DL    D +
Sbjct: 19  ESLSEEEIAGLKEMFNMIDADKSGQITFEELKAGLKRVGAN---LKESEILDLMQAADVD 75

Query: 413 RDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPV 472
             GT+D +E +     L K + +D L   F  +D D SG IT +E+              
Sbjct: 76  NSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACEEF------- 128

Query: 473 DITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDS 508
            + +  +++E+   +D +NDG++ ++EF A MQ+ S
Sbjct: 129 GVED-VRIEELMRDVDQDNDGRIDYNEFVAMMQKGS 163

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 Length = 176

 Score = 76.7 bits (189), Expect = 1e-16
 Identities = 29/172 (16%), Positives = 61/172 (35%), Gaps = 38/172 (22%)

Query: 361 EEEIQNLRIHFRTICANGDNA-TLSEFEEVLKAMN---------------MSSLVPLAPR 404
                 L+  F     +G+ A   ++FE+  + +                 ++   L   
Sbjct: 3   AIASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDY 62

Query: 405 IFDLFDNNRDGTVDMREILCGFSSLRKSQGDDA--------LRLCFQMYDIDRSGCITKE 456
           +        DG++   + +    +L   QG+ +        ++    M D +  G I  +
Sbjct: 63  LAKEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINAD 122

Query: 457 EVASMLRAL---PDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQ 505
           E A+ L AL     +             E F+ +D N +G+++ DE   A++
Sbjct: 123 EFAAWLTALGMSKAEA-----------AEAFNQVDTNGNGELSLDELLTAVR 163

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 Length = 176

 Score = 65.2 bits (159), Expect = 1e-12
 Identities = 18/120 (15%), Positives = 43/120 (35%), Gaps = 17/120 (14%)

Query: 404 RIFDLFDNNRDGTVDMREILCGFSSLRKSQG------------DDALRLCFQMY---DID 448
           + FD +D + +G ++  +       + ++ G            +    L   +     + 
Sbjct: 11  KRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVG 70

Query: 449 RSGCITKEE-VASMLRALPD-DCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR 506
             G +T+E+ +      + +      +      +  I  + D N DG++  DEF A +  
Sbjct: 71  SDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTA 130

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 Length = 176

 Score = 57.8 bits (140), Expect = 4e-10
 Identities = 13/85 (15%), Positives = 28/85 (32%), Gaps = 11/85 (12%)

Query: 438 LRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEP----------GKLDEIFDLM 487
           L+  F  +D D +G + + +     + +  +    D              G  D +    
Sbjct: 9   LKKRFDRWDFDGNGALERADFEKEAQHI-AEAFGKDAGAAEVQTLKNAFGGLFDYLAKEA 67

Query: 488 DANNDGKVTFDEFRAAMQRDSSLQD 512
              +DG +T ++F    +     Q 
Sbjct: 68  GVGSDGSLTEEQFIRVTENLIFEQG 92

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 Length = 176

 Score = 46.7 bits (111), Expect = 3e-06
 Identities = 27/145 (18%), Positives = 51/145 (35%), Gaps = 20/145 (13%)

Query: 337 VLSSTIFLRRTKKLKNLLGSHDLNEEEIQNLRIHFRTIC--------ANGDNA-TLSEFE 387
            L    F +  + +    G  D    E+Q L+  F  +            D + T  +F 
Sbjct: 23  ALERADFEKEAQHIAEAFG-KDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFI 81

Query: 388 EVLKAMN--------MSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALR 439
            V + +            L P+   I  + D N DG ++  E     ++L  S       
Sbjct: 82  RVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALGMS--KAEAA 139

Query: 440 LCFQMYDIDRSGCITKEEVASMLRA 464
             F   D + +G ++ +E+ + +R 
Sbjct: 140 EAFNQVDTNGNGELSLDELLTAVRD 164

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 Length = 176

 Score = 40.9 bits (96), Expect = 2e-04
 Identities = 7/28 (25%), Positives = 13/28 (46%)

Query: 479 KLDEIFDLMDANNDGKVTFDEFRAAMQR 506
           +L + FD  D + +G +   +F    Q 
Sbjct: 8   RLKKRFDRWDFDGNGALERADFEKEAQH 35

>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A Length = 220

 Score = 76.0 bits (187), Expect = 6e-16
 Identities = 20/149 (13%), Positives = 45/149 (30%), Gaps = 14/149 (9%)

Query: 357 HDLNEEEIQNLRIHFRTICANGDNA-TLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDG 415
           + +  ++   +   F  +  +      ++E         +      A R+  +FD + +G
Sbjct: 43  NTIPLDQYTRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNG 102

Query: 416 TVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDIT 475
            +   E    F ++ K          F M    RSG +   E+   L+ L          
Sbjct: 103 HISFYE----FMAMYKFMEL--AYNLFVMNARARSGTLEPHEILPALQQL-------GFY 149

Query: 476 EPGKLDEIFDLMDANNDGKVTFDEFRAAM 504
              +   +   + A        + + A  
Sbjct: 150 INQRTSLLLHRLFARGMAFCDLNCWIAIC 178

>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A Length = 220

 Score = 62.5 bits (152), Expect = 3e-11
 Identities = 18/102 (17%), Positives = 37/102 (36%), Gaps = 12/102 (11%)

Query: 404 RIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLR 463
           + F   D +R GT+++ E++ G                 +++D D +G I+  E  +M +
Sbjct: 55  QWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYEFMAMYK 114

Query: 464 ALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQ 505
            +                 +F +      G +   E   A+Q
Sbjct: 115 FM------------ELAYNLFVMNARARSGTLEPHEILPALQ 144

>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A Length = 220

 Score = 51.3 bits (123), Expect = 1e-07
 Identities = 13/79 (16%), Positives = 27/79 (34%), Gaps = 6/79 (7%)

Query: 435 DDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGK 494
              +   F   D DRSG +   E+           + +          +  + D + +G 
Sbjct: 50  YTRIYQWFMGVDRDRSGTLEINELMMGQFPG---GIRLSPQT---ALRMMRIFDTDFNGH 103

Query: 495 VTFDEFRAAMQRDSSLQDV 513
           ++F EF A  +      ++
Sbjct: 104 ISFYEFMAMYKFMELAYNL 122

>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 188

 Score = 75.0 bits (185), Expect = 7e-16
 Identities = 40/155 (25%), Positives = 72/155 (46%), Gaps = 15/155 (9%)

Query: 356 SHDLNEEEIQNLRIHFRTICANGDNA-TLSEFEEVLKAMNMSSLVPLAPRIFDLF---DN 411
           +  L+EEEI  L+  F+ I  +     T  E ++ LK +       +   I DL    D 
Sbjct: 1   AERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSE---LMESEIKDLMDAADI 57

Query: 412 NRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLP 471
           ++ GT+D  E +     L K + ++ L   F  +D D SG IT +E+    +        
Sbjct: 58  DKSGTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDF------ 111

Query: 472 VDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR 506
             + +   +D++   +D +NDG++ + EF A M++
Sbjct: 112 -GLDDI-HIDDMIKEIDQDNDGQIDYGEFAAMMRK 144

>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 Length = 191

 Score = 74.3 bits (183), Expect = 1e-15
 Identities = 26/160 (16%), Positives = 52/160 (32%), Gaps = 13/160 (8%)

Query: 355 GSHDLNEEEIQNLRIHFRTICANGDNA-TLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNR 413
                +  + Q L   FR +  +G  A ++ E    L +  +   +    ++  ++D N 
Sbjct: 17  APSARHMNDNQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNH 76

Query: 414 DGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVD 473
            G +   E    F  L        +R  F+  D    G +   EV + L +         
Sbjct: 77  SGEITFDE----FKDLHHFILS--MREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQT 130

Query: 474 ITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDSSLQDV 513
                    +    D    G + FD++         +++V
Sbjct: 131 ------FQALMRKFDRQRRGSLGFDDYVELSIFVCRVRNV 164

>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A Length = 166

 Score = 72.5 bits (178), Expect = 3e-15
 Identities = 32/171 (18%), Positives = 50/171 (29%), Gaps = 37/171 (21%)

Query: 362 EEIQNLRIHFRTICANGDNA-TLSEFEEVLKAM---------------NMSSLVPLAPRI 405
           E  + +   F T   +G+     S+F    KAM                      L   +
Sbjct: 1   EYERRIAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGL 60

Query: 406 FDLFDNNRDGTVDMREILCGFSSLRKSQGDDA-------LRLCFQMYDIDRSGCITKEEV 458
             + D + D  +   E + G     + + D         L     + D D  G +T  + 
Sbjct: 61  AGIADRDGDQRITREEFVTGAVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADT 120

Query: 459 ASMLRAL---PDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR 506
           A  L A     D              +    +D + DGKV   E   A  R
Sbjct: 121 ARALTAFGVPEDLA-----------RQAAAALDTDGDGKVGETEIVPAFAR 160

>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A Length = 166

 Score = 62.1 bits (151), Expect = 1e-11
 Identities = 11/84 (13%), Positives = 28/84 (33%), Gaps = 9/84 (10%)

Query: 438 LRLCFQMYDIDRSGCITKEEVASMLRAL-------PDDCLPVDITEP--GKLDEIFDLMD 488
           +   F  +D D +G I + + +   +A+               +          +  + D
Sbjct: 6   IAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIAD 65

Query: 489 ANNDGKVTFDEFRAAMQRDSSLQD 512
            + D ++T +EF     +    + 
Sbjct: 66  RDGDQRITREEFVTGAVKRLRDKP 89

>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A Length = 134

 Score = 71.4 bits (176), Expect = 3e-15
 Identities = 36/138 (26%), Positives = 58/138 (42%), Gaps = 14/138 (10%)

Query: 371 FRTICANGDNA-TLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSL 429
           F+ I  NGD A +  E +  +          L   IF   D + +G +D  E    + S+
Sbjct: 6   FKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSI 65

Query: 430 RKSQGDDA---LRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDL 486
           +     D    L++ +++ D+D  G +TKEEV S  +    +          K+ E    
Sbjct: 66  QGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIE----------KVAEQVMK 115

Query: 487 MDANNDGKVTFDEFRAAM 504
            DAN DG +T +EF    
Sbjct: 116 ADANGDGYITLEEFLEFS 133

>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A Length = 134

 Score = 62.2 bits (152), Expect = 6e-12
 Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 3/103 (2%)

Query: 404 RIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLR 463
            +F   D N DG V   E+    S  R  + +  L+L F+  D D +G I + E A    
Sbjct: 4   ALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYG 63

Query: 464 ALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR 506
           ++    L  D      L  ++ LMD + DGK+T +E  +  ++
Sbjct: 64  SIQGQDLSDDKIG---LKVLYKLMDVDGDGKLTKEEVTSFFKK 103

>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A Length = 134

 Score = 52.9 bits (128), Expect = 1e-08
 Identities = 15/69 (21%), Positives = 28/69 (40%), Gaps = 6/69 (8%)

Query: 438 LRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTF 497
               F+  D++  G ++ EEV + +             E   L  IF  +DA+ +G++  
Sbjct: 2   AEALFKEIDVNGDGAVSYEEVKAFVSKKRA-----IKNEQ-LLQLIFKSIDADGNGEIDQ 55

Query: 498 DEFRAAMQR 506
           +EF      
Sbjct: 56  NEFAKFYGS 64

>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 Length = 185

 Score = 71.1 bits (174), Expect = 2e-14
 Identities = 23/174 (13%), Positives = 54/174 (31%), Gaps = 34/174 (19%)

Query: 359 LNEEEIQNLRIHFRTIC-ANGDNA-TLSEFEEVLKAMN---------------MSSLVPL 401
           LN+ + Q ++  F      N D +   ++FE+++                    +SL   
Sbjct: 2   LNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDE 61

Query: 402 APRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDA---------LRLCFQMYDIDRSGC 452
              +    D N+D  V   E L  +     +    A         +   F+  D+   G 
Sbjct: 62  WRDLKGRADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGI 121

Query: 453 ITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR 506
           +  EE  +  +          +     +  +++++          + ++    R
Sbjct: 122 VDLEEFQNYCKNF-------QLQC-ADVPAVYNVITDGGKVTFDLNRYKELYYR 167

>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 Length = 185

 Score = 39.5 bits (92), Expect = 8e-04
 Identities = 12/44 (27%), Positives = 19/44 (43%), Gaps = 1/44 (2%)

Query: 479 KLDEIFDLM-DANNDGKVTFDEFRAAMQRDSSLQDVVLSSLRQQ 521
           K+   FD   D N+DG +  ++F   M R   +    LS    +
Sbjct: 9   KIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYK 52

>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A Length = 169

 Score = 70.3 bits (173), Expect = 2e-14
 Identities = 36/176 (20%), Positives = 73/176 (41%), Gaps = 14/176 (7%)

Query: 338 LSSTIFLRRTKKLKNLLGSHDLNEEEIQNLRIHFRTICANGDNA-TLSEFEEVLKAMNMS 396
           +S       + +     G   L EE+ Q +R  F     +G       E +  ++A+   
Sbjct: 1   MSYKAKTVVSARRDQKKGRVGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFE 60

Query: 397 SLVPLAPRIFDL---FDNNRDGTVDMREILCGFSS-LRKSQGDDALRLCFQMYDIDRSGC 452
              P    I  +    D +  GT+D  E L   ++ + +    + +   F+++D D SG 
Sbjct: 61  ---PKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGT 117

Query: 453 ITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDS 508
           IT +++  + + L ++    ++       E+    D N+D ++  DEF   M++ S
Sbjct: 118 ITIKDLRRVAKELGENLTEEEL------QEMIAEADRNDDNEIDEDEFIRIMKKTS 167

>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A Length = 261

 Score = 72.0 bits (176), Expect = 3e-14
 Identities = 35/247 (14%), Positives = 76/247 (30%), Gaps = 31/247 (12%)

Query: 287 PNRRPSAQELLNHPWVIGDSAKEEEMDAEIVSRLQSFNARRKLRAAAIASVLSSTIFL-- 344
           P  +      +  PW    S  +        ++   ++  +        + L++  F   
Sbjct: 2   PASQHFLSTSVQGPWERAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAY 61

Query: 345 RRTKKLKNLLGSHDLNEEEIQNLRIHFRTICANGDNATLSE----------FEEVLKAMN 394
           R   KL+ L  +  L+   +              ++  +            ++ + +  N
Sbjct: 62  RTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHN 121

Query: 395 MSSLVPLAPR-----IFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDR 449
               VPL        + +++D  R G + +     G  SL K+  +D  R  F+      
Sbjct: 122 NLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVA-SS 180

Query: 450 SGCITKEEVASMLRALPDDCLPVDITEPGKL---------DEIFDLMDANNDGKVTFDEF 500
           +G   +  +  +L       +P  + E                F    ANN  ++    F
Sbjct: 181 TGFCDQRRLGLLLHDSIQ--IPRQLGEVASFGGSNIEPSVRSCF--QFANNKPEIEAALF 236

Query: 501 RAAMQRD 507
              M+ +
Sbjct: 237 LDWMRLE 243

>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} PDB: 2gv5_A 2doq_A 3fwc_A Length = 161

 Score = 68.7 bits (169), Expect = 6e-14
 Identities = 32/169 (18%), Positives = 65/169 (38%), Gaps = 22/169 (13%)

Query: 345 RRTKKLKNLLGSHDLNEEEIQNLRIHFRTICANGDNA-TLSEFEEVLKAMNMSSLVPLAP 403
           +    L++   + +L EE+ Q +   F     N D      E +  +KA+          
Sbjct: 3   KNRSSLQSGPLNSELLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFE---LPKR 59

Query: 404 RIFDL---FDNNRDGTVDMREILCGFSSL--RKSQGDDA---LRLCFQMYDIDRSGCITK 455
            I DL   +D+     +   +    F  +   K    D    ++  FQ++D D +G I+ 
Sbjct: 60  EILDLIDEYDSEGRHLMKYDD----FYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISI 115

Query: 456 EEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAM 504
           + +  + + L +     +      L  + +  D + DG++  +EF A  
Sbjct: 116 KNLRRVAKELGETLTDEE------LRAMIEEFDLDGDGEINENEFIAIC 158

>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} PDB: 2gv5_A 2doq_A 3fwc_A Length = 161

 Score = 53.3 bits (129), Expect = 1e-08
 Identities = 14/72 (19%), Positives = 31/72 (43%), Gaps = 12/72 (16%)

Query: 438 LRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLM---DANNDGK 494
           +   F ++D++  G +   E+   ++A     L  ++ +     EI DL+   D+     
Sbjct: 25  IYEAFSLFDMNNDGFLDYHELKVAMKA-----LGFELPK----REILDLIDEYDSEGRHL 75

Query: 495 VTFDEFRAAMQR 506
           + +D+F   M  
Sbjct: 76  MKYDDFYIVMGE 87

>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} PDB: 2gv5_A 2doq_A 3fwc_A Length = 161

 Score = 52.2 bits (126), Expect = 3e-08
 Identities = 20/101 (19%), Positives = 37/101 (36%), Gaps = 7/101 (6%)

Query: 406 FDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEE-VASMLRA 464
           F LFD N DG +D  E+     +L        +      YD +    +  ++    M   
Sbjct: 29  FSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFYIVMGEK 88

Query: 465 LPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQ 505
           +       D  +  ++   F L D ++ GK++    R   +
Sbjct: 89  ILKR----DPLD--EIKRAFQLFDDDHTGKISIKNLRRVAK 123

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 71.9 bits (176), Expect = 7e-14
 Identities = 40/169 (23%), Positives = 70/169 (41%), Gaps = 37/169 (21%)

Query: 149 RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS----SVEGYTDPVVGL 204
            Q+A+G+  L     +HRDL   N L     E + +KI DFGL+        Y       
Sbjct: 200 FQVAKGMEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLARDIYKDPDYVRKGDAR 256

Query: 205 FGSIDYVSPEALLQDRITSKSDMWSLGVILY-ILLSGYPPFIA-QSNRQKQQMIMAG--- 259
              + +++PE +     T +SD+WS GV+L+ I   G  P+   + + +  + +  G   
Sbjct: 257 L-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM 315

Query: 260 ---EF---SFYE---QTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH 299
              ++     Y+     W                 +P++RP+  EL+ H
Sbjct: 316 RAPDYTTPEMYQTMLDCWHG---------------EPSQRPTFSELVEH 349

>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A Length = 172

 Score = 68.4 bits (168), Expect = 8e-14
 Identities = 32/154 (20%), Positives = 54/154 (35%), Gaps = 14/154 (9%)

Query: 362 EEIQNLRIHFRTICANGDNA-TLSEFEEVLKAMNMSSLVPLAPR-IFDLFDNNRDGTVDM 419
            +   L   F+ +  +     + +E ++ L     +   P+  R I  +FD      V+ 
Sbjct: 4   PDQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNF 63

Query: 420 REILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGK 479
            E    F+ + K   D   +  F+ YD D SG I K E+   L                 
Sbjct: 64  SE----FTGVWKYITD--WQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFH----- 112

Query: 480 LDEIFDLMDANNDGKVTFDEFRAAMQRDSSLQDV 513
            D +    D    G++ FD+F         L D+
Sbjct: 113 -DILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDI 145

>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A Length = 191

 Score = 69.1 bits (169), Expect = 9e-14
 Identities = 26/168 (15%), Positives = 50/168 (29%), Gaps = 28/168 (16%)

Query: 359 LNEEEIQNLRIHFRTICANGDNA-TLSEFEEVLKAMNMSSL--VPLAPRIFDL-----FD 410
            N   I   +  F  +  N +   +L E       + +++L   P   +         F 
Sbjct: 10  DNPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFG 69

Query: 411 NN---RDGTVD-----------MREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKE 456
                     D             + L  ++    +         F + D D++G IT +
Sbjct: 70  GAGMKYGVETDWPAYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLD 129

Query: 457 EVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAM 504
           E  +  +A        D       +E F + D +  G++  DE     
Sbjct: 130 EWKAYTKAAGIIQSSEDC------EETFRVCDIDESGQLDVDEMTRQH 171

>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A Length = 191

 Score = 58.3 bits (141), Expect = 4e-10
 Identities = 19/117 (16%), Positives = 42/117 (35%), Gaps = 15/117 (12%)

Query: 404 RIFDLFDNNRDGTVDMREILCG-----FSSLRKSQGDDALRLCFQMYDIDRSGC-----I 453
            +F+  D N +G + + E++        ++L  +                 +G       
Sbjct: 20  HMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVET 79

Query: 454 TKEE-VASMLRALPDDCLPVDITEP----GKLDEIFDLMDANNDGKVTFDEFRAAMQ 505
                +    +   D+       EP       D +FD++D + +G +T DE++A  +
Sbjct: 80  DWPAYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTK 136

>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A Length = 191

 Score = 44.8 bits (106), Expect = 2e-05
 Identities = 8/74 (10%), Positives = 24/74 (32%), Gaps = 6/74 (8%)

Query: 438 LRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDG---- 493
            +  F   D++ +G I+ +E+      +  + L     +  K  +          G    
Sbjct: 18  HKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQ-AKRHKDAVEAFFGGAGMKYG 76

Query: 494 -KVTFDEFRAAMQR 506
            +  +  +    ++
Sbjct: 77  VETDWPAYIEGWKK 90

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 73.0 bits (178), Expect = 1e-13
 Identities = 71/544 (13%), Positives = 150/544 (27%), Gaps = 145/544 (26%)

Query: 8   LTDEYEVTDILGRGG-FSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSS 66
           L+ E E+  I+      S   R       +  ++  K +  +     Y F  S   +   
Sbjct: 46  LSKE-EIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRIN-YKFLMSPIKTEQR 103

Query: 67  QIGFFPTRKQVSVSDALLTN-------------EILVMRKIVENVSPHPNVIDLYDVYED 113
           Q     TR  +   D L  +               L +R+ +  + P  NV+        
Sbjct: 104 QPSM-MTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVL-------- 154

Query: 114 QNGVH---------LILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIV 164
              +          + L++C   ++  ++  +  ++ +        + E L  L      
Sbjct: 155 ---IDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKL------ 205

Query: 165 HRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALL-QDRITS 223
              + P        R D    I       +      +  L  S  Y     LL       
Sbjct: 206 LYQIDPN----WTSRSDHSSNIKL----RIHSIQAELRRLLKSKPY--ENCLLVLL---- 251

Query: 224 KSDMWSLGVILY------ILLSGYPPFIA---QSNRQKQQMIMAGEFSFYEQTWKNISSS 274
             ++ +            ILL+     +     +       +     +            
Sbjct: 252 --NVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTP-------DE 302

Query: 275 AKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAKEEEMDAEIVSRLQSFNAR----RKLR 330
            K L+   L   P   P  + L  +P  +        +   I   ++   A     + + 
Sbjct: 303 VKSLLLKYLDCRPQDLPR-EVLTTNPRRLS-------I---IAESIRDGLATWDNWKHVN 351

Query: 331 AAAIASVLSSTIFLRRTKKLKNLLGSHDLNEEEIQNLRIHFRTICANGDNATLSEFEEVL 390
              + +++ S++              + L   E + +   F           LS F    
Sbjct: 352 CDKLTTIIESSL--------------NVLEPAEYRKM---FD---------RLSVFPP-- 383

Query: 391 KAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGF--SSLRKSQGDDALRLCFQMYDID 448
                S+ +P    +  L   +     D+  ++      SL + Q  ++      +  I 
Sbjct: 384 -----SAHIP--TILLSLIWFDVI-KSDVMVVVNKLHKYSLVEKQPKEST---ISIPSIY 432

Query: 449 RSGCITKEEVASMLRALPD-----DCLPVDITEPGKLDE-IFD-----LMDANNDGKVTF 497
               +  E   ++ R++ D          D   P  LD+  +      L +  +  +   
Sbjct: 433 LELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPER--M 490

Query: 498 DEFR 501
             FR
Sbjct: 491 TLFR 494

>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A Length = 153

 Score = 67.6 bits (166), Expect = 1e-13
 Identities = 42/164 (25%), Positives = 64/164 (39%), Gaps = 25/164 (15%)

Query: 356 SHDLNEEEIQNLRIHFRTICANGDNA-TLSEFEEVLKAMNMSSLVPLAPRIFDL---FDN 411
              L  EEI+ LR  FR    + D      +    ++ M      P    + +L    + 
Sbjct: 2   DRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYM---PTEMELIELSQQINM 58

Query: 412 NRDGTVDMREILCGFSSL--RKSQGDDA-------LRLCFQMYDIDRSGCITKEEVASML 462
           N  G VD  +    F  L   K   + A       LR  F+ +D +  G I+  E+   +
Sbjct: 59  NLGGHVDFDD----FVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAM 114

Query: 463 RALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR 506
           RAL    +         ++EI   +D N DG+V F+EF   M R
Sbjct: 115 RALLGHQVGHR-----DIEEIIRDVDLNGDGRVDFEEFVRMMSR 153

>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A Length = 153

 Score = 54.8 bits (133), Expect = 3e-09
 Identities = 19/78 (24%), Positives = 32/78 (41%), Gaps = 12/78 (15%)

Query: 438 LRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLM---DANNDGK 494
           LR  F+ +D D+ G I   ++ + +R      +    TE     E+ +L    + N  G 
Sbjct: 13  LREAFREFDKDKDGYINCRDLGNCMRT-----MGYMPTE----MELIELSQQINMNLGGH 63

Query: 495 VTFDEFRAAMQRDSSLQD 512
           V FD+F   M      + 
Sbjct: 64  VDFDDFVELMGPKLLAET 81

>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A Length = 179

 Score = 68.3 bits (168), Expect = 1e-13
 Identities = 38/160 (23%), Positives = 73/160 (45%), Gaps = 22/160 (13%)

Query: 356 SHDLNEEEIQNLRIHFRTICANGDNA-TLSEFEEVLKAMNMSSLVPLAPRIFDL---FDN 411
           +  L EE+I   +  F     +GD   T  E   V++++  +   P    + D+    D 
Sbjct: 2   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN---PTEAELQDMINEVDA 58

Query: 412 NRDGTVDMREILCGFSSL--RKSQGDDA---LRLCFQMYDIDRSGCITKEEVASMLRALP 466
           + +GT+D  E    F ++  RK +  D+   +R  F+++D D +G I+  E+  ++  L 
Sbjct: 59  DGNGTIDFPE----FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG 114

Query: 467 DDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR 506
           +     ++      DE+    D + DG+V ++EF   M  
Sbjct: 115 EKLTDEEV------DEMIREADIDGDGQVNYEEFVQMMTA 148

>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A Length = 179

 Score = 41.7 bits (99), Expect = 2e-04
 Identities = 32/157 (20%), Positives = 58/157 (36%), Gaps = 13/157 (8%)

Query: 347 TKKLKNLLGS--HDLNEEEIQNLRIHFRTICANGDNATLSEFEEVLKAM--NMSSLVPLA 402
           TK+L  ++ S   +  E E+Q++      + A+G N T+ +F E L  M   M       
Sbjct: 30  TKELGTVMRSLGQNPTEAELQDM---INEVDADG-NGTI-DFPEFLTMMARKMKDTDSEE 84

Query: 403 P--RIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVAS 460
                F +FD + +G +   E+    ++L +   D+ +    +  DID  G +  EE   
Sbjct: 85  EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 144

Query: 461 MLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTF 497
           M+ A           E   +      +          
Sbjct: 145 MMTAKGGGGGAAARKE--VIRNKIRAIGKMARVFSVL 179

>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A* Length = 195

 Score = 68.6 bits (168), Expect = 1e-13
 Identities = 31/180 (17%), Positives = 50/180 (27%), Gaps = 28/180 (15%)

Query: 347 TKKLKNLLGSHDLNEEEIQNLRIHFRTICANGDNA-TLSEFEEVLKAMNMSSL------- 398
           + K    L +   N   I+  +  F  +  NG+   TL E          + L       
Sbjct: 2   SSKYAVKLKTDFDNPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQT 61

Query: 399 ---VPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDA-----------LRLCFQM 444
                     F          +   + L G+  L  S+                   F +
Sbjct: 62  KRHQVCVEAFFRGCGMEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDI 121

Query: 445 YDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAM 504
           +D D SG IT +E  +  +         D       +  F   D +N G +  DE     
Sbjct: 122 FDKDGSGTITLDEWKAYGKISGISPSQEDC------EATFRHCDLDNAGDLDVDEMTRQH 175

>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A* Length = 195

 Score = 52.8 bits (127), Expect = 3e-08
 Identities = 21/118 (17%), Positives = 38/118 (32%), Gaps = 15/118 (12%)

Query: 404 RIFDLFDNNRDGTVDMREILCGFSS-LRKSQG----DDALRLCFQMYDIDRSGCITKEE- 457
            +FD  D N +G + + EI+   S  +                         G    +E 
Sbjct: 24  HMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKEI 83

Query: 458 -----VASMLRALPDDCLPVDITEPG----KLDEIFDLMDANNDGKVTFDEFRAAMQR 506
                +    +    +       EP       D +FD+ D +  G +T DE++A  + 
Sbjct: 84  AFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKI 141

>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A* Length = 195

 Score = 42.0 bits (99), Expect = 1e-04
 Identities = 11/83 (13%), Positives = 27/83 (32%), Gaps = 12/83 (14%)

Query: 438 LRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLM--------DA 489
            +  F   DI+ +G IT +E+ S         L     +     +   +           
Sbjct: 22  HKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQ----TKRHQVCVEAFFRGCGM 77

Query: 490 NNDGKVTFDEFRAAMQRDSSLQD 512
               ++ F +F    ++ ++ + 
Sbjct: 78  EYGKEIAFPQFLDGWKQLATSEL 100

>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A Length = 272

 Score = 70.1 bits (171), Expect = 2e-13
 Identities = 25/180 (13%), Positives = 53/180 (29%), Gaps = 28/180 (15%)

Query: 356 SHDLNEEEIQNLRIHFRTICANGDNA-TLSEFEEVLKAMNMS----------SLVPLAPR 404
                  +       ++   A+ +      E ++  + M              +  +   
Sbjct: 2   DSAFANLDAAGFLQIWQHFDADDNGYIEGKELDDFFRHMLKKLQPKDKITDERVQQIKKS 61

Query: 405 IFDLFDNNRDGTVDMRE-----------ILCGFSSLRKSQGDDALRLCFQMYDIDRSGCI 453
               +D   DG + + E            L  F               ++ YD D SG I
Sbjct: 62  FMSAYDATFDGRLQIEELANMILPQEENFLLIFRREAPLDNSVEFMKIWRKYDADSSGYI 121

Query: 454 TKEEVASMLRAL----PDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDSS 509
           +  E+ + L+ L         P  + E    D +  + D N DG++  ++    +    +
Sbjct: 122 SAAELKNFLKDLFLQHKKKIPPNKLDE--YTDAMMKIFDKNKDGRLDLNDLARILALQEN 179

>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A Length = 272

 Score = 69.3 bits (169), Expect = 3e-13
 Identities = 27/172 (15%), Positives = 59/172 (34%), Gaps = 25/172 (14%)

Query: 357 HDLNEEEIQNLRIHFRTICANGDNA-TLSEFEEVLKAMNMSSLVPLAP--------RIFD 407
            +   +        +R   A+     + +E +  LK + +     + P         +  
Sbjct: 96  REAPLDNSVEFMKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMK 155

Query: 408 LFDNNRDGTVDMREIL------------CGFSSLRKSQGDDALRLCFQMYDIDRSGCITK 455
           +FD N+DG +D+ ++                 +  + +        F  YD+ R+G +  
Sbjct: 156 IFDKNKDGRLDLNDLARILALQENFLLQFKMDASSQVERKRDFEKIFAHYDVSRTGALEG 215

Query: 456 EEVASMLRALPDDCLPVDITEPG---KLDEIFDLMDANNDGKVTFDEFRAAM 504
            EV   ++ + +   P  I+        + +    D N DGK+   E    +
Sbjct: 216 PEVDGFVKDMMELVRP-SISGGDLDKFRECLLTHCDMNKDGKIQKSELALCL 266

>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A Length = 272

 Score = 53.9 bits (129), Expect = 3e-08
 Identities = 19/150 (12%), Positives = 47/150 (31%), Gaps = 18/150 (12%)

Query: 371 FRTICANGDNATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLR 430
              +    +   L  F       N    +    +I+  +D +  G +   E+      L 
Sbjct: 79  LANMILPQEENFLLIFRREAPLDNSVEFM----KIWRKYDADSSGYISAAELKNFLKDLF 134

Query: 431 KSQG--------DDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGK--- 479
                       D+      +++D ++ G +   ++A +L    +  L   +    +   
Sbjct: 135 LQHKKKIPPNKLDEYTDAMMKIFDKNKDGRLDLNDLARILALQENFLLQFKMDASSQVER 194

Query: 480 ---LDEIFDLMDANNDGKVTFDEFRAAMQR 506
               ++IF   D +  G +   E    ++ 
Sbjct: 195 KRDFEKIFAHYDVSRTGALEGPEVDGFVKD 224

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 69.9 bits (172), Expect = 2e-13
 Identities = 39/109 (35%), Positives = 56/109 (51%), Gaps = 15/109 (13%)

Query: 151 IAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGL---SSVEGYTD---PVVGL 204
            A G+  LH+ + +HRD+K  N L   D   +  KI DFGL   S     T     +VG 
Sbjct: 142 AANGINFLHENHHIHRDIKSANILL--DEAFTA-KISDFGLARASEKFAQTVMTSRIVGT 198

Query: 205 FGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQ 253
                Y++PEAL    IT KSD++S GV+L  +++G P      +R+ Q
Sbjct: 199 TA---YMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAV--DEHREPQ 241

>1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1 Length = 78

 Score = 64.7 bits (158), Expect = 2e-13
 Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 6/75 (8%)

Query: 436 DALRLCFQMYDIDR--SGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDG 493
             L+  F+ Y         ++KEE    L+ L     P  +  P  LD++F  +D N DG
Sbjct: 7   AELKSIFEKYAAKEGDPNQLSKEE----LKQLIQAEFPSLLKGPRTLDDLFQELDKNGDG 62

Query: 494 KVTFDEFRAAMQRDS 508
           +V+F+EF+  +++ S
Sbjct: 63  EVSFEEFQVLVKKIS 77

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 70.1 bits (172), Expect = 2e-13
 Identities = 60/268 (22%), Positives = 96/268 (35%), Gaps = 67/268 (25%)

Query: 12  YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFF 71
           + V   +G G F  +R G      E   VAIK                   S + Q    
Sbjct: 11  FRVGKKIGCGNFGELRLGKNLYTNE--YVAIKLEPM--------------KSRAPQ---- 50

Query: 72  PTRKQVSVSDALLTNEILVMRKIVENVSPH-PNVIDLYDVYEDQNGVHLILELC--SGGE 128
                       L  E    +++        P V   +      N   ++LEL   S  +
Sbjct: 51  ------------LHLEYRFYKQLGS--GDGIPQVYY-FGPCGKYN--AMVLELLGPSLED 93

Query: 129 LFDRIVAQERYMEVGAAAVI-RQIAEGLAALHQANIVHRDLKPENCLF--LNDREDSPLK 185
           LFD     +R   +    +I  Q+   +  +H  N+++RD+KPEN L     ++    + 
Sbjct: 94  LFDL---CDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIH 150

Query: 186 IMDFGLSSVEGYTDP----------VVGLFGSIDYVSPEALL---QDRITSKSDMWSLGV 232
           I+DF L+    Y DP             L G+  Y+S    L   Q R   + D+ +LG 
Sbjct: 151 IIDFALAKE--YIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSR---RDDLEALGH 205

Query: 233 ILYILLSGYPP---FIAQSNRQKQQMIM 257
           +    L G  P     A + +++ Q I 
Sbjct: 206 MFMYFLRGSLPWQGLKADTLKERYQKIG 233

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 69.7 bits (171), Expect = 3e-13
 Identities = 59/264 (22%), Positives = 92/264 (34%), Gaps = 61/264 (23%)

Query: 12  YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFF 71
           Y +   +G G F  +  G     GE  +VAIK                   +   Q    
Sbjct: 11  YRLGRKIGSGSFGDIYLGTDIAAGE--EVAIKLECV--------------KTKHPQ---- 50

Query: 72  PTRKQVSVSDALLTNEILVMRKIVENVSPH-PNVIDLYDVYEDQNGVHLILELCSGGELF 130
                       L  E  + + +        P +        D N   +++EL  G  L 
Sbjct: 51  ------------LHIESKIYKMM--QGGVGIPTIRW-CGAEGDYN--VMVMELL-GPSLE 92

Query: 131 DRIVAQERYMEVGAAAVI-RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDF 189
           D      R   +    ++  Q+   +  +H  N +HRD+KP+N L    ++ + + I+DF
Sbjct: 93  DLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDF 152

Query: 190 GLSSVEGYTDPVVG----------LFGSIDYVSPEALL---QDRITSKSDMWSLGVILYI 236
           GL+    Y D              L G+  Y S    L   Q R   + D+ SLG +L  
Sbjct: 153 GLAK--KYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSR---RDDLESLGYVLMY 207

Query: 237 LLSGYPP---FIAQSNRQKQQMIM 257
              G  P     A + RQK + I 
Sbjct: 208 FNLGSLPWQGLKAATKRQKYERIS 231

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 69.5 bits (171), Expect = 3e-13
 Identities = 64/271 (23%), Positives = 106/271 (39%), Gaps = 74/271 (27%)

Query: 4   ETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSS 63
           +  + T+ ++   ++G G F  V +G+ +   +  +VA+K                R + 
Sbjct: 33  DLEEATNNFDHKFLIGHGVFGKVYKGVLR---DGAKVALK----------------RRTP 73

Query: 64  SSSQIGF--FPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLIL 121
            SSQ G   F               EI  +         HP+++ L    +++N   +IL
Sbjct: 74  ESSQ-GIEEF-------------ETEIETLSFCR-----HPHLVSLIGFCDERN--EMIL 112

Query: 122 --ELCSGGELFDRIVAQERYME-----------VGAAAVIRQIAEGLAALHQANIVHRDL 168
             +    G L   +   +               +GAA        GL  LH   I+HRD+
Sbjct: 113 IYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAA-------RGLHYLHTRAIIHRDV 165

Query: 169 KPENCLFLNDREDSPLKIMDFGLSSVEGYTDP------VVGLFGSIDYVSPEALLQDRIT 222
           K  N L L++      KI DFG+S      D       V G  G   Y+ PE  ++ R+T
Sbjct: 166 KSINIL-LDENFVP--KITDFGISKKGTELDQTHLSTVVKGTLG---YIDPEYFIKGRLT 219

Query: 223 SKSDMWSLGVILYILLSGYPPFIAQSNRQKQ 253
            KSD++S GV+L+ +L      +    R+  
Sbjct: 220 EKSDVYSFGVVLFEVLCARSAIVQSLPREMV 250

>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A Length = 143

 Score = 65.6 bits (161), Expect = 4e-13
 Identities = 31/155 (20%), Positives = 66/155 (42%), Gaps = 22/155 (14%)

Query: 361 EEEIQNLRIHFRTICANGDNA-TLSEFEEVLKAMNMSSLVPLAPRIFDL---FDNNRDGT 416
           EE+ Q +R  F    A+G     + E +  ++A+      P    I  +    D    G 
Sbjct: 2   EEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFE---PKKEEIKKMISEIDKEGTGK 58

Query: 417 VDMREILCGFSSL--RKSQGDDA---LRLCFQMYDIDRSGCITKEEVASMLRALPDDCLP 471
           ++  +    F ++  +K    D    +   F+++D D +G I+ + +  + + L ++   
Sbjct: 59  MNFGD----FLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTD 114

Query: 472 VDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR 506
            ++       E+ D  D + DG+V+  EF   M++
Sbjct: 115 EEL------QEMIDEADRDGDGEVSEQEFLRIMKK 143

>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens} Length = 91

 Score = 63.9 bits (156), Expect = 5e-13
 Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 8/68 (11%)

Query: 438 LRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTF 497
           LR  F   D +RSG + +EE  ++   L           P   + +F  +DA+ DG +TF
Sbjct: 29  LRSVFAACDANRSGRLEREEFRALCTELR--------VRPADAEAVFQRLDADRDGAITF 80

Query: 498 DEFRAAMQ 505
            EF     
Sbjct: 81  QEFARGFL 88

>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens} Length = 91

 Score = 43.5 bits (103), Expect = 7e-06
 Identities = 19/80 (23%), Positives = 29/80 (36%), Gaps = 3/80 (3%)

Query: 348 KKLKNLLGSHDLNEEEIQNLRIHFRTICANGDNA-TLSEFEEVLKAMNMSSLVPLAPRIF 406
            +        D + EE+  LR  F    AN        EF  +   + +      A  +F
Sbjct: 10  GRENLYFQGADGDGEELARLRSVFAACDANRSGRLEREEFRALCTELRVRPAD--AEAVF 67

Query: 407 DLFDNNRDGTVDMREILCGF 426
              D +RDG +  +E   GF
Sbjct: 68  QRLDADRDGAITFQEFARGF 87

>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ... Length = 162

 Score = 65.7 bits (161), Expect = 6e-13
 Identities = 39/161 (24%), Positives = 69/161 (42%), Gaps = 25/161 (15%)

Query: 357 HDLNEEEIQNLRIHFRTICANGDNA-TLSEFEEVLKAMNMSSLVPLAPRIFDL---FDNN 412
             L+EE I   +  F    A+G    +  E   V++ +  +   P    +  +    D +
Sbjct: 12  AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQN---PTKEELDAIIEEVDED 68

Query: 413 RDGTVDMREILCGFSSL--------RKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRA 464
             GT+D  E    F  +         K + ++ L  CF+++D +  G I  EE+  +LRA
Sbjct: 69  GSGTIDFEE----FLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRA 124

Query: 465 LPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQ 505
             +     D      ++++    D NNDG++ FDEF   M+
Sbjct: 125 TGEHVTEED------IEDLMKDSDKNNDGRIDFDEFLKMME 159

>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ... Length = 162

 Score = 54.5 bits (132), Expect = 5e-09
 Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 12/72 (16%)

Query: 438 LRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLM---DANNDGK 494
            +  F M+D D  G I+ +E+ +++R      L  + T+    +E+  ++   D +  G 
Sbjct: 22  FKAAFDMFDADGGGDISTKELGTVMRM-----LGQNPTK----EELDAIIEEVDEDGSGT 72

Query: 495 VTFDEFRAAMQR 506
           + F+EF   M R
Sbjct: 73  IDFEEFLVMMVR 84

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 69.1 bits (168), Expect = 6e-13
 Identities = 42/229 (18%), Positives = 75/229 (32%), Gaps = 26/229 (11%)

Query: 9   TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQI 68
           T++ +  + +G G F  V + I         VAIK +   G     G           +I
Sbjct: 19  TEKLQRCEKIGEGVFGEVFQTIADH----TPVAIKIIAIEGPDLVNGSHQKTFEEILPEI 74

Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHP-NVIDLYDVYEDQNG----------- 116
                   +S      T   + +  +      +P  ++  +D Y    G           
Sbjct: 75  IISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKD 134

Query: 117 --VHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQA-NIVHRDLKPENC 173
             + ++LE   GG   +++  +   +   A +++ Q+   LA    +    HRDL   N 
Sbjct: 135 DQLFIVLEFEFGGIDLEQMRTKLSSLAT-AKSILHQLTASLAVAEASLRFEHRDLHWGNV 193

Query: 174 LFLNDREDSPLKIMDFGLSSVEGYTDPVVGL-FGSIDYVSPEALLQDRI 221
           L    ++ S  K+           T P  GL    IDY          +
Sbjct: 194 LL---KKTSLKKLHYTLNGKS--STIPSCGLQVSIIDYTLSRLERDGIV 237

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 68.4 bits (168), Expect = 8e-13
 Identities = 67/268 (25%), Positives = 99/268 (36%), Gaps = 83/268 (30%)

Query: 4   ETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSS 63
           E +  +D +   +ILGRGGF  V +G     G    VA+K L                 +
Sbjct: 24  ELQVASDNFSNKNILGRGGFGKVYKGRLAD-GT--LVAVKRL-------------KEERT 67

Query: 64  SSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYD----------VYE- 112
              ++ F                E+ ++   V     H N++ L            VY  
Sbjct: 68  QGGELQFQ--------------TEVEMISMAV-----HRNLLRLRGFCMTPTERLLVYPY 108

Query: 113 DQNG---VHLILELCSGGELFD-----RIVAQERYMEVGAAAVIRQIAEGLAALHQA--- 161
             NG     L  E        D     RI        +G+A        GLA LH     
Sbjct: 109 MANGSVASCL-RERPESQPPLDWPKRQRIA-------LGSA-------RGLAYLHDHCDP 153

Query: 162 NIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP-----VVGLFGSIDYVSPEAL 216
            I+HRD+K  N L   D E     + DFGL+ +  Y D      V G  G   +++PE L
Sbjct: 154 KIIHRDVKAANILL--DEEFEA-VVGDFGLAKLMDYKDTHVTTAVRGTIG---HIAPEYL 207

Query: 217 LQDRITSKSDMWSLGVILYILLSGYPPF 244
              + + K+D++  GV+L  L++G   F
Sbjct: 208 STGKSSEKTDVFGYGVMLLELITGQRAF 235

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 68.2 bits (167), Expect = 9e-13
 Identities = 62/273 (22%), Positives = 106/273 (38%), Gaps = 55/273 (20%)

Query: 1   MGQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSR 60
           M  +   +   Y+V   +G G F V+  G      +  QVAIK                 
Sbjct: 1   MSGQNNVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQ--QVAIKF--------------EP 44

Query: 61  GSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLI 120
             S + Q                L +E     K++   +  PNV   +      N   L+
Sbjct: 45  RRSDAPQ----------------LRDEYRTY-KLLAGCTGIPNVYY-FGQEGLHN--VLV 84

Query: 121 LELCSGGELFDRIVAQERYMEVGAAAVI-RQIAEGLAALHQANIVHRDLKPENCLF--LN 177
           ++L  G  L D +    R   V   A+  +Q+   + ++H+ ++V+RD+KP+N L    N
Sbjct: 85  IDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPN 143

Query: 178 DREDSPLKIMDFGLSSVEGYTDP----------VVGLFGSIDYVSPEALLQDRITSKSDM 227
            +  + + ++DFG+     Y DP             L G+  Y+S    L    + + D+
Sbjct: 144 SKNANMIYVVDFGMVKF--YRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDL 201

Query: 228 WSLGVILYILLSGYPP---FIAQSNRQKQQMIM 257
            +LG +    L G  P     A +N+QK + I 
Sbjct: 202 EALGHVFMYFLRGSLPWQGLKAATNKQKYERIG 234

>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4 Length = 109

 Score = 63.4 bits (155), Expect = 1e-12
 Identities = 23/93 (24%), Positives = 43/93 (46%), Gaps = 5/93 (5%)

Query: 414 DGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVD 473
            GT D +          K + D  ++  F++ D D+SG I +EE+  +L+        ++
Sbjct: 21  PGTFDYKRFFH--LVGLKGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLN 78

Query: 474 ITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR 506
            TE      +    D+++DGK+  DEF   + +
Sbjct: 79  DTE---TKALLAAGDSDHDGKIGADEFAKMVAQ 108

>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A Length = 263

 Score = 66.8 bits (163), Expect = 2e-12
 Identities = 32/168 (19%), Positives = 56/168 (33%), Gaps = 18/168 (10%)

Query: 359 LNEEEIQNLRIHFRTICANGDNA-TLSEFEEVLKAM------NMSSLVPLAPRIFDLFDN 411
            +          +    A+G       E + +++ +          L P      D +  
Sbjct: 10  SSLITASQFFEIWLHFDADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQYGQ 69

Query: 412 NRDGTVDMREIL------CGFSSLRKSQGDDA---LRLCFQMYDIDRSGCITKEEVASML 462
             DG + + E+         F  L + Q   +       ++ YD D SG I  EE+ + L
Sbjct: 70  RDDGKIGIVELAHVLPTEENFLLLFRCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFL 129

Query: 463 RAL--PDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDS 508
           + L    +    D       D +  L D+NNDGK+   E    +    
Sbjct: 130 KDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLPVQE 177

>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A Length = 263

 Score = 65.3 bits (159), Expect = 5e-12
 Identities = 25/175 (14%), Positives = 57/175 (32%), Gaps = 18/175 (10%)

Query: 347 TKKLKNLLGSHDLNEEEIQNLRIHFRTICANGD-NATLSEFEEVLKAMNMSSLVPLAPR- 404
             +   LL       +  +     +R    +        E +  LK +   +   +    
Sbjct: 85  PTEENFLLLFRCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTK 144

Query: 405 -------IFDLFDNNRDGTVDMRE--------ILCGFSSLRKSQGDDALRLCFQMYDIDR 449
                  +  LFD+N DG +++ E                            F++YD D 
Sbjct: 145 LAEYTDLMLKLFDSNNDGKLELTEMARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDG 204

Query: 450 SGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAM 504
           +G I + E+ ++L+ L +     ++          ++M  ++ GK+   +    +
Sbjct: 205 NGYIDENELDALLKDLCEKNKQ-ELDINNISTYKKNIMALSDGGKLYRTDLALIL 258

>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A Length = 263

 Score = 57.6 bits (139), Expect = 2e-09
 Identities = 14/85 (16%), Positives = 32/85 (37%), Gaps = 2/85 (2%)

Query: 428 SLRKSQGDDA--LRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFD 485
           S  +S    A      +  +D D SG +  +E+ ++++ L        +    ++    D
Sbjct: 6   SHLQSSLITASQFFEIWLHFDADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVD 65

Query: 486 LMDANNDGKVTFDEFRAAMQRDSSL 510
                +DGK+   E    +  + + 
Sbjct: 66  QYGQRDDGKIGIVELAHVLPTEENF 90

>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A Length = 263

 Score = 57.6 bits (139), Expect = 2e-09
 Identities = 20/144 (13%), Positives = 49/144 (34%), Gaps = 22/144 (15%)

Query: 385 EFEEVLKAMNMSSLVPLAPR------------IFDLFDNNRDGTVDMREILCGFSSL--- 429
              E+   +       L  R             +  +D +  G ++  E+      L   
Sbjct: 76  GIVELAHVLPTEENFLLLFRCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEK 135

Query: 430 -----RKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGK--LDE 482
                  ++  +   L  +++D +  G +   E+A +L    +  L     +      ++
Sbjct: 136 ANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLPVQENFLLKFQGIKMCGKEFNK 195

Query: 483 IFDLMDANNDGKVTFDEFRAAMQR 506
            F+L D + +G +  +E  A ++ 
Sbjct: 196 AFELYDQDGNGYIDENELDALLKD 219

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 68.5 bits (167), Expect = 2e-12
 Identities = 61/264 (23%), Positives = 95/264 (35%), Gaps = 61/264 (23%)

Query: 12  YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFF 71
           + +   +G G F  +  G      E  +VAIK                   +   Q    
Sbjct: 9   FRLGRKIGSGSFGEIYLGTNIQTNE--EVAIKLENV--------------KTKHPQ---- 48

Query: 72  PTRKQVSVSDALLTNEILVMRKIVENVSPH-PNVIDLYDVYEDQNGVHLILELCSGGELF 130
                       L  E  + R +        PNV   + V  D N   L+++L  G  L 
Sbjct: 49  ------------LLYESKIYRIL--QGGTGIPNVRW-FGVEGDYN--VLVMDLL-GPSLE 90

Query: 131 DRIVAQERYMEVGAAAVI-RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDF 189
           D      R + +    ++  Q+   +  +H  + +HRD+KP+N L    R  + + I+DF
Sbjct: 91  DLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDF 150

Query: 190 GLSSVEGYTDP----------VVGLFGSIDYVSPEALL---QDRITSKSDMWSLGVILYI 236
           GL+    Y D              L G+  Y S    L   Q R   + D+ SLG +L  
Sbjct: 151 GLAKK--YRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSR---RDDLESLGYVLMY 205

Query: 237 LLSGYPP---FIAQSNRQKQQMIM 257
            L G  P     A + +QK + I 
Sbjct: 206 FLRGSLPWQGLKAGTKKQKYEKIS 229

>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A Length = 158

 Score = 64.1 bits (157), Expect = 2e-12
 Identities = 34/157 (21%), Positives = 60/157 (38%), Gaps = 19/157 (12%)

Query: 358 DLNEEEIQNLRIHFRTI-CANGDNA-TLSEFEEVLKAMNMSSLVPLAPRIFDL---FDNN 412
            L+  +++ L   FR      G    +  +   +L+ + +         I  L   FD  
Sbjct: 6   KLSSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQ---QTKSTIRQLIDEFDPF 62

Query: 413 RDGTVDMREIL-----CGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPD 467
            +G +D               +   Q    LR  F++YD + +G I+ + +  +L  L +
Sbjct: 63  GNGDIDFDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDE 122

Query: 468 DCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAM 504
                D      LD + D +DA+  G V F+EF   M
Sbjct: 123 TLSSED------LDAMIDEIDADGSGTVDFEEFMGVM 153

>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A Length = 158

 Score = 54.5 bits (132), Expect = 5e-09
 Identities = 22/102 (21%), Positives = 37/102 (36%), Gaps = 4/102 (3%)

Query: 406 FDLFD-NNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEE-VASMLR 463
           F  F+     G V   +I      L   Q    +R     +D   +G I  +       R
Sbjct: 19  FRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGAR 78

Query: 464 ALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQ 505
            L ++  P  + +  +L E F L D   +G ++ D  R  + 
Sbjct: 79  FLGEEVNPEQMQQ--ELREAFRLYDKEGNGYISTDVMREILA 118

>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A Length = 158

 Score = 49.9 bits (120), Expect = 2e-07
 Identities = 15/73 (20%), Positives = 31/73 (42%), Gaps = 13/73 (17%)

Query: 438 LRLCFQMYD-IDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLM---DANNDG 493
           L   F+ ++  + SG ++ +++  +L  L      +  T+      I  L+   D   +G
Sbjct: 15  LETAFRDFETPEGSGRVSTDQIGIILEVLG-----IQQTK----STIRQLIDEFDPFGNG 65

Query: 494 KVTFDEFRAAMQR 506
            + FD F+    R
Sbjct: 66  DIDFDSFKIIGAR 78

>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} PDB: 2kqy_A Length = 109

 Score = 62.7 bits (153), Expect = 2e-12
 Identities = 18/92 (19%), Positives = 38/92 (41%), Gaps = 5/92 (5%)

Query: 414 DGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVD 473
             + + +      +    S+  D ++  F + D D+SG I +EE+   L+        + 
Sbjct: 22  ADSFNYKSFFS--TVGLSSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLT 79

Query: 474 ITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQ 505
             E           D + DGK+  +EF++ ++
Sbjct: 80  SAE---TKAFLAAGDTDGDGKIGVEEFQSLVK 108

>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ... Length = 148

 Score = 63.3 bits (155), Expect = 3e-12
 Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 22/158 (13%)

Query: 356 SHDLNEEEIQNLRIHFRTICANGDNA-TLSEFEEVLKAMNMSSLVPLAPRIFDL---FDN 411
           +  L EE+I   +  F     +GD   T  E   V++++  +   P    + D+    D 
Sbjct: 1   AEQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQN---PTEAELQDMINEVDA 57

Query: 412 NRDGTVDMREILCGFSSL--RKSQGDDA---LRLCFQMYDIDRSGCITKEEVASMLRALP 466
           + +GT+D  E    F SL  RK +  D+   L   F+++D D +G I+  E+  ++  L 
Sbjct: 58  DGNGTIDFPE----FLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLG 113

Query: 467 DDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAM 504
           +     ++      DE+    D + DG + ++EF   M
Sbjct: 114 EKLTDDEV------DEMIREADIDGDGHINYEEFVRMM 145

>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ... Length = 148

 Score = 53.3 bits (129), Expect = 1e-08
 Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 12/72 (16%)

Query: 438 LRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLM---DANNDGK 494
            +  F ++D D  G IT +E+ +++R+     L  + TE     E+ D++   DA+ +G 
Sbjct: 12  FKEAFALFDKDGDGTITTKELGTVMRS-----LGQNPTE----AELQDMINEVDADGNGT 62

Query: 495 VTFDEFRAAMQR 506
           + F EF + M R
Sbjct: 63  IDFPEFLSLMAR 74

>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ... Length = 148

 Score = 49.4 bits (119), Expect = 2e-07
 Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 13/104 (12%)

Query: 406 FDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEE-VASMLRA 464
           F LFD + DGT+  +E+     SL ++  +  L+      D D +G I   E ++ M R 
Sbjct: 16  FALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMAR- 74

Query: 465 LPDDCLPVDITEPGKLDEI---FDLMDANNDGKVTFDEFRAAMQ 505
                    + E    +E+   F + D + +G ++  E R  M 
Sbjct: 75  --------KMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMT 110

>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A Length = 450

 Score = 66.5 bits (162), Expect = 7e-12
 Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 16/168 (9%)

Query: 343 FLRRTKKLKNLLGSHDLNEEEIQNLRIHFRTICANGDNA-TLSEFEEVLKAMNMSSLVPL 401
                           L EE+I   +  F     +GD   T  E   V++++  +     
Sbjct: 290 DGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE 349

Query: 402 APRIFDLFDNNRDGTVDMREILCGFSSL--RKSQGDDA---LRLCFQMYDIDRSGCITKE 456
              + +  D + +GT+D  E    F ++  RK +  D+   +R  F+++D D +G I+  
Sbjct: 350 LQDMINEVDADGNGTIDFPE----FLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAA 405

Query: 457 EVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAM 504
           E+  ++  L +      +T+  ++DE+    D + DG+V ++EF   M
Sbjct: 406 ELRHVMTNLGEK-----LTDE-EVDEMIREADIDGDGQVNYEEFVQMM 447

>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A Length = 450

 Score = 54.5 bits (131), Expect = 4e-08
 Identities = 25/105 (23%), Positives = 44/105 (41%), Gaps = 11/105 (10%)

Query: 404 RIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLR 463
             F LFD + DGT+  +E+     SL ++  +  L+      D D +G I   E  +M+ 
Sbjct: 316 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 375

Query: 464 ALPDDCLPVDITEPGKLDEI---FDLMDANNDGKVTFDEFRAAMQ 505
                     + +    +EI   F + D + +G ++  E R  M 
Sbjct: 376 RK--------MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 412

>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A Length = 450

 Score = 54.5 bits (131), Expect = 4e-08
 Identities = 37/177 (20%), Positives = 74/177 (41%), Gaps = 23/177 (12%)

Query: 336 SVLSSTIFLRRTKKLKNLLGSHDLN-----EEEIQNLRIHFRTICANGDNATLSEFEEVL 390
             L +T+ ++   +  + +  HD       E  IQ   I F+    +G+  T +E +   
Sbjct: 217 PTLVTTLXVQCFSRYPDHMKQHDFFKSAMPEGYIQERTIFFK---DDGNYKTRAEVKFEG 273

Query: 391 KAMNMSSLVPLAPRIFDLFDNNRDGTVDMREIL-CGFSSLRKSQGDDALRLCFQMYDIDR 449
             +     +          D   DG +   ++       L + Q  +  +  F ++D D 
Sbjct: 274 DTLVNRIEL-------KGIDFKEDGNILGHKLEYNTRDQLTEEQIAE-FKEAFSLFDKDG 325

Query: 450 SGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR 506
            G IT +E+ +++R+L       + TE  +L ++ + +DA+ +G + F EF   M R
Sbjct: 326 DGTITTKELGTVMRSLG-----QNPTE-AELQDMINEVDADGNGTIDFPEFLTMMAR 376

>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C Length = 151

 Score = 61.8 bits (151), Expect = 1e-11
 Identities = 25/158 (15%), Positives = 66/158 (41%), Gaps = 23/158 (14%)

Query: 358 DLNEEEIQNLRIHFRTICANGDNA-TLSEFEEVLKAMNMSSLVPLAPRIFDL-----FDN 411
           + N+++++  +  F      GD     S+  +V++A+  +   P    +  +      D 
Sbjct: 3   EFNKDQLEEFKEAFELFDRVGDGKILYSQCGDVMRALGQN---PTNAEVLKVLGNPKSDE 59

Query: 412 NRDGTVDMREILCGFSSLRKSQGDDA---LRLCFQMYDIDRSGCITKEEVASMLRALPDD 468
            +   VD    L    ++ K++G          F+++D + +G +   E+  +L  L + 
Sbjct: 60  LKSRRVDFETFLPMLQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGE- 118

Query: 469 CLPVDITEPGKLDEIFDLMDA--NNDGKVTFDEFRAAM 504
                +TE    +E+  ++    +++G + ++ F   +
Sbjct: 119 ----KMTE----EEVETVLAGHEDSNGCINYEAFLKHI 148

>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C Length = 151

 Score = 50.7 bits (122), Expect = 9e-08
 Identities = 14/80 (17%), Positives = 30/80 (37%), Gaps = 14/80 (17%)

Query: 438 LRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLM-----DANND 492
            +  F+++D    G I   +   ++RA     L  + T      E+  ++     D    
Sbjct: 12  FKEAFELFDRVGDGKILYSQCGDVMRA-----LGQNPTN----AEVLKVLGNPKSDELKS 62

Query: 493 GKVTFDEFRAAMQRDSSLQD 512
            +V F+ F   +Q  +  + 
Sbjct: 63  RRVDFETFLPMLQAVAKNRG 82

>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C Length = 151

 Score = 44.5 bits (106), Expect = 1e-05
 Identities = 21/105 (20%), Positives = 36/105 (34%), Gaps = 11/105 (10%)

Query: 406 FDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDR--SGCITKEEVASMLR 463
           F+LFD   DG +   +      +L ++  +  +         D   S  +  E    ML+
Sbjct: 16  FELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQ 75

Query: 464 ALPDDCLPVDITEPGKLDEI---FDLMDANNDGKVTFDEFRAAMQ 505
           A             G  ++    F + D   +GKV   E R  + 
Sbjct: 76  A------VAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLT 114

>1psr_A Psoriasin, S100A7; EF-hand protein, MAD phasing, psoriasis, S100 protein family; 1.05A {Homo sapiens} SCOP: a.39.1.2 PDB: 2psr_A 2wor_A* 2wos_A* 3psr_A 2wnd_A Length = 100

 Score = 60.6 bits (147), Expect = 1e-11
 Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 2/61 (3%)

Query: 441 CFQMYDIDRSGCITKEEVASMLRA-LPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDE 499
            F  Y   R   I K  + +M++   P+     D      L ++F+  D N D K+ F E
Sbjct: 15  MFHKYT-RRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSE 73

Query: 500 F 500
           F
Sbjct: 74  F 74

>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A Length = 83

 Score = 59.9 bits (146), Expect = 1e-11
 Identities = 15/69 (21%), Positives = 28/69 (40%)

Query: 438 LRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTF 497
           L   F+  D +  G +T  E+ + +  L                ++  + D N+DGK++ 
Sbjct: 9   LEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKISK 68

Query: 498 DEFRAAMQR 506
           +EF  A   
Sbjct: 69  EEFLNANAE 77

>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 1f54_A 1f55_A Length = 147

 Score = 61.7 bits (151), Expect = 1e-11
 Identities = 31/162 (19%), Positives = 74/162 (45%), Gaps = 27/162 (16%)

Query: 356 SHDLNEEEIQNLRIHFRTICANGDNA-TLSEFEEVLKAMNMSSLVPLAPRIFDL---FDN 411
           S +L EE+I   +  F     +   + + SE   V++++ +S   P    + DL    D 
Sbjct: 2   SQNLTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLS---PSEAEVADLMNEIDV 58

Query: 412 NRDGTVDMREILCGFSSL--RKSQGDDA---LRLCFQMYDIDRSGCITKEEVASMLRALP 466
           + +  ++  E    F +L  R+ + +D+   L   F+++D +  G I+  E+  +L ++ 
Sbjct: 59  DGNHAIEFSE----FLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIG 114

Query: 467 DDCLPVDITEPGKLDEIFDLMDA--NNDGKVTFDEFRAAMQR 506
           +      +T+     E+ +++    +  G++   +F A + +
Sbjct: 115 E-----KLTD----AEVDEMLREVSDGSGEINIKQFAALLSK 147

>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ... Length = 161

 Score = 61.8 bits (151), Expect = 1e-11
 Identities = 41/160 (25%), Positives = 68/160 (42%), Gaps = 22/160 (13%)

Query: 357 HDLNEEEIQNLRIHFRTICANGDNATLSEFEEVLKAMNMSSLVPLAPRIFDL---FDNNR 413
             L EE+    +  F       ++ ++S  +E+ K M M    P    + ++    D + 
Sbjct: 10  EQLTEEQKNEFKAAFDIFVLGAEDGSIS-TKELGKVMRMLGQNPTPEELQEMIDEVDEDG 68

Query: 414 DGTVDMREILCGFSSL--RKSQGDDA------LRLCFQMYDIDRSGCITKEEVASMLRAL 465
            GTVD  E    F  +  R  + D        L   F+M+D +  G I  EE+  ML+A 
Sbjct: 69  SGTVDFDE----FLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQAT 124

Query: 466 PDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQ 505
            +     D      ++E+    D NNDG++ +DEF   M+
Sbjct: 125 GETITEDD------IEELMKDGDKNNDGRIDYDEFLEFMK 158

>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ... Length = 161

 Score = 48.7 bits (117), Expect = 5e-07
 Identities = 17/73 (23%), Positives = 33/73 (45%), Gaps = 13/73 (17%)

Query: 438 LRLCFQMYDID-RSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLM---DANNDG 493
            +  F ++ +    G I+ +E+  ++R L       + T     +E+ +++   D +  G
Sbjct: 20  FKAAFDIFVLGAEDGSISTKELGKVMRMLG-----QNPTP----EELQEMIDEVDEDGSG 70

Query: 494 KVTFDEFRAAMQR 506
            V FDEF   M R
Sbjct: 71  TVDFDEFLVMMVR 83

>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A Length = 108

 Score = 59.9 bits (146), Expect = 2e-11
 Identities = 19/92 (20%), Positives = 35/92 (38%), Gaps = 5/92 (5%)

Query: 414 DGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVD 473
             +   +E          S+  D ++  F + D D+SG I ++E+   L+        + 
Sbjct: 21  ADSFKHKEFFA--KVGLASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALT 78

Query: 474 ITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQ 505
             E           D + DG +  DEF A ++
Sbjct: 79  DAE---TKAFLADGDKDGDGMIGVDEFAAMIK 107

>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B Length = 166

 Score = 61.8 bits (151), Expect = 2e-11
 Identities = 26/158 (16%), Positives = 50/158 (31%), Gaps = 11/158 (6%)

Query: 357 HDLNEEEIQNLRIHFRTICANGDNA-TLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDG 415
              +E EI++ +  F  I  N D      +  E   AM       +     D       G
Sbjct: 17  SMFDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRL---NVKNEELDAMIKEASG 73

Query: 416 TVDMREILCGFSS-LRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDI 474
            ++    L  F   L+ +  +D +   F++ D D  G I K  +  +L            
Sbjct: 74  PINFTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGR-----F 128

Query: 475 TEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDSSLQD 512
           T   ++  ++     +  G V +      +      + 
Sbjct: 129 TP-EEIKNMWAAFPPDVAGNVDYKNICYVITHGEDAEG 165

>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4 Length = 109

 Score = 60.0 bits (146), Expect = 2e-11
 Identities = 16/92 (17%), Positives = 36/92 (39%), Gaps = 5/92 (5%)

Query: 414 DGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVD 473
             + + +           ++  D ++  F + D D+SG I ++E+   L+        + 
Sbjct: 22  ADSFNYKAFFA--KVGLTAKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALT 79

Query: 474 ITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQ 505
             E           D++ DG +  DE+ A ++
Sbjct: 80  DAE---TKAFLKAGDSDGDGAIGVDEWAALVK 108

>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} Length = 66

 Score = 58.3 bits (142), Expect = 2e-11
 Identities = 18/62 (29%), Positives = 28/62 (45%)

Query: 404 RIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLR 463
            +F   D N DG V   E+    S  R  + +  L+L F+  D D +G I + E A    
Sbjct: 4   ALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYG 63

Query: 464 AL 465
           ++
Sbjct: 64  SI 65

>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} Length = 66

 Score = 56.8 bits (138), Expect = 9e-11
 Identities = 15/67 (22%), Positives = 28/67 (41%), Gaps = 6/67 (8%)

Query: 438 LRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTF 497
               F+  D++  G ++ EEV + +             E   L  IF  +DA+ +G++  
Sbjct: 2   AEALFKEIDVNGDGAVSYEEVKAFVSKKR-----AIKNEQ-LLQLIFKSIDADGNGEIDQ 55

Query: 498 DEFRAAM 504
           +EF    
Sbjct: 56  NEFAKFY 62

>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} Length = 66

 Score = 44.9 bits (107), Expect = 1e-06
 Identities = 8/27 (29%), Positives = 17/27 (62%)

Query: 480 LDEIFDLMDANNDGKVTFDEFRAAMQR 506
            + +F  +D N DG V+++E +A + +
Sbjct: 2   AEALFKEIDVNGDGAVSYEEVKAFVSK 28

>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A Length = 110

 Score = 59.5 bits (145), Expect = 3e-11
 Identities = 20/92 (21%), Positives = 39/92 (42%), Gaps = 5/92 (5%)

Query: 414 DGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVD 473
           +G+ + ++         K+   + ++  F+  D D SG I +EE+  +L++   D   + 
Sbjct: 22  EGSFNHKKFFA--LVGLKAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLT 79

Query: 474 ITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQ 505
             E           D + DGK+  DEF   + 
Sbjct: 80  DAE---TKAFLKAADKDGDGKIGIDEFETLVH 108

>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A Length = 86

 Score = 58.8 bits (143), Expect = 3e-11
 Identities = 16/75 (21%), Positives = 31/75 (41%), Gaps = 7/75 (9%)

Query: 438 LRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTF 497
               F+ +D +  G I+  E+   L+ L           P ++  +   +D + DG ++F
Sbjct: 13  RERIFKRFDTNGDGKISSSELGDALKTL-------GSVTPDEVRRMMAEIDTDGDGFISF 65

Query: 498 DEFRAAMQRDSSLQD 512
           DEF    + +  L  
Sbjct: 66  DEFTDFARANRGLVK 80

>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C Length = 143

 Score = 60.4 bits (146), Expect = 3e-11
 Identities = 15/70 (21%), Positives = 32/70 (45%), Gaps = 6/70 (8%)

Query: 442 FQMYDIDRSGCITKEEVASMLRAL-----PDDCLPVDITEPGKL-DEIFDLMDANNDGKV 495
           F+M+D D +  +   E+++ +  +      +    +   E   + D +    D NNDG +
Sbjct: 74  FKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDGYI 133

Query: 496 TFDEFRAAMQ 505
            + EF  ++Q
Sbjct: 134 DYAEFAKSLQ 143

>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus} Length = 143

 Score = 60.2 bits (147), Expect = 3e-11
 Identities = 29/152 (19%), Positives = 60/152 (39%), Gaps = 16/152 (10%)

Query: 359 LNEEEIQNLRIHFRTICANGDNA-TLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTV 417
            ++ +IQ  +  F  I  N D      +  ++L +M  +   P    +  +  +   G +
Sbjct: 1   FDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKN---PTDEYLEGM-MSEAPGPI 56

Query: 418 DMREILCGFSSLRKSQGDDA---LRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDI 474
           +    L  F    K  G D    +R  F  +D + SG I ++ +  +L  + D       
Sbjct: 57  NFTMFLTMFG--EKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTTMGDR-----F 109

Query: 475 TEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR 506
           T+  ++DE++     +  G   + EF   ++ 
Sbjct: 110 TDE-EVDEMYREAPIDKKGNFNYVEFTRILKH 140

>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A Length = 76

 Score = 57.6 bits (140), Expect = 6e-11
 Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 6/75 (8%)

Query: 436 DALRLCFQMYDIDR--SGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDG 493
           + ++  F+++         I+KEE+  +++ L    L         LDE+ + +D N DG
Sbjct: 5   EEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLK----GMSTLDEMIEEVDKNGDG 60

Query: 494 KVTFDEFRAAMQRDS 508
           +V+F+EF   M++ S
Sbjct: 61  EVSFEEFLVMMKKIS 75

>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A Length = 173

 Score = 60.1 bits (146), Expect = 8e-11
 Identities = 27/163 (16%), Positives = 60/163 (36%), Gaps = 27/163 (16%)

Query: 362 EEIQNLRIHFRTICANGDNATLSEFEEVLKAMNMSSLVPLAPR-----------IFDLFD 410
           EE++  R  F  +   GD+  +S   E++  +N         +           +  + D
Sbjct: 1   EEVRQFRRLFAQLA--GDDMEVS-ATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMD 57

Query: 411 NNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCL 470
           ++  G +   E    +++++K       +  ++ +D+DRSG I   E+     A      
Sbjct: 58  SDTTGKLGFEEFKYLWNNIKK------WQAIYKQFDVDRSGTIGSSELPGAFEAA----- 106

Query: 471 PVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDSSLQDV 513
                    L  +     ++  G + FD F + + R  ++   
Sbjct: 107 --GFHLNEHLYSMIIRRYSDEGGNMDFDNFISCLVRLDAMFRA 147

>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5 Length = 67

 Score = 56.7 bits (138), Expect = 8e-11
 Identities = 12/69 (17%), Positives = 34/69 (49%), Gaps = 6/69 (8%)

Query: 438 LRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTF 497
            +  F+ +D ++ G ++ +E   +  A          T+   + + F+ +D + +G++  
Sbjct: 3   AKRVFEKFDKNKDGKLSLDEFREVALAFSP-----YFTQ-EDIVKFFEEIDVDGNGELNA 56

Query: 498 DEFRAAMQR 506
           DEF + +++
Sbjct: 57  DEFTSCIEK 65

>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10 Length = 78

 Score = 56.4 bits (137), Expect = 1e-10
 Identities = 17/77 (22%), Positives = 32/77 (41%), Gaps = 7/77 (9%)

Query: 436 DALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKV 495
           D +   F+ +D +  G I+  E+   LR L         T   ++  +   +D + DG +
Sbjct: 3   DDMERIFKRFDTNGDGKISLSELTDALRTL-------GSTSADEVQRMMAEIDTDGDGFI 55

Query: 496 TFDEFRAAMQRDSSLQD 512
            F+EF +    +  L  
Sbjct: 56  DFNEFISFCNANPGLMK 72

>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 87

 Score = 56.8 bits (138), Expect = 1e-10
 Identities = 22/93 (23%), Positives = 42/93 (45%), Gaps = 8/93 (8%)

Query: 412 NRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLP 471
           +  G +D  +       L + +    L+  F+M D D SG IT +E+   L+ +      
Sbjct: 1   HSSGHIDDDDKHMA-ERLSEEEIGG-LKELFKMIDTDNSGTITFDELKDGLKRVGS---- 54

Query: 472 VDITEPGKLDEIFDLMDANNDGKVTFDEFRAAM 504
            ++ E  ++ ++ D  D +  G + + EF AA 
Sbjct: 55  -ELMES-EIKDLMDAADIDKSGTIDYGEFIAAT 85

>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 87

 Score = 41.0 bits (97), Expect = 5e-05
 Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 8/59 (13%)

Query: 448 DRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR 506
             SG I  ++   M   L ++    +I     L E+F ++D +N G +TFDE +  ++R
Sbjct: 1   HSSGHIDDDDKH-MAERLSEE----EIGG---LKELFKMIDTDNSGTITFDELKDGLKR 51

>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A Length = 108

 Score = 57.3 bits (139), Expect = 1e-10
 Identities = 19/92 (20%), Positives = 38/92 (41%), Gaps = 5/92 (5%)

Query: 414 DGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVD 473
             +   ++     S + K      L+  F++ D D+SG I ++E+   L+        + 
Sbjct: 21  PDSFSPKK-FFQISGMSKKSSSQ-LKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLT 78

Query: 474 ITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQ 505
            +E           D + DGK+  +EF+  +Q
Sbjct: 79  ASE---TKTFLAAADHDGDGKIGAEEFQEMVQ 107

>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A Length = 108

 Score = 57.3 bits (139), Expect = 2e-10
 Identities = 21/92 (22%), Positives = 39/92 (42%), Gaps = 5/92 (5%)

Query: 414 DGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVD 473
             T + ++     S L K      ++  F+  D D+SG +  +E+   L+    D   + 
Sbjct: 21  PDTFEPQKFFQ-TSGLSKMSASQ-VKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELT 78

Query: 474 ITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQ 505
            +E      + D  D + DGK+  DEF+  + 
Sbjct: 79  ESE---TKSLMDAADNDGDGKIGADEFQEMVH 107

>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A Length = 108

 Score = 39.6 bits (93), Expect = 3e-04
 Identities = 8/35 (22%), Positives = 17/35 (48%)

Query: 476 EPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDSSL 510
              ++ +IF  +D +  G +  DE +  +Q+  S 
Sbjct: 39  SASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSD 73

>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A Length = 109

 Score = 57.3 bits (139), Expect = 2e-10
 Identities = 20/93 (21%), Positives = 39/93 (41%), Gaps = 5/93 (5%)

Query: 414 DGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVD 473
             + D ++         K +  D ++  F + D D+SG I ++E+ S+L+    D   + 
Sbjct: 21  ADSFDHKKFFQ--MVGLKKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLS 78

Query: 474 ITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR 506
             E      +    D + DGK+  +EF   +  
Sbjct: 79  AKE---TKTLMAAGDKDGDGKIGVEEFSTLVAE 108

>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A Length = 81

 Score = 55.2 bits (134), Expect = 4e-10
 Identities = 11/69 (15%), Positives = 32/69 (46%), Gaps = 5/69 (7%)

Query: 438 LRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTF 497
           +   F+++D +  G I  +E   +++ + ++ L        +++E     D + +G +  
Sbjct: 10  ILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDA-----EVEEAMKEADEDGNGVIDI 64

Query: 498 DEFRAAMQR 506
            EF   +++
Sbjct: 65  PEFMDLIKK 73

>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens} Length = 71

 Score = 54.8 bits (133), Expect = 4e-10
 Identities = 17/70 (24%), Positives = 33/70 (47%), Gaps = 6/70 (8%)

Query: 438 LRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTF 497
           L++ F+ +D D  G IT +E+   +  L       +      LD +    D + DG+V +
Sbjct: 8   LQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEE------LDAMIREADVDQDGRVNY 61

Query: 498 DEFRAAMQRD 507
           +EF   + ++
Sbjct: 62  EEFARMLAQE 71

>2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A Length = 106

 Score = 56.0 bits (135), Expect = 5e-10
 Identities = 14/67 (20%), Positives = 27/67 (40%), Gaps = 6/67 (8%)

Query: 436 DALRLCFQMYDIDRSGC--ITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDG 493
           + +   F  +         ++  E     + L    LP  + + G LDE    +D N D 
Sbjct: 22  ETVVTTFFTFARQEGRKDSLSVNE----FKELVTQQLPHLLKDVGSLDEKMKSLDVNQDS 77

Query: 494 KVTFDEF 500
           ++ F+E+
Sbjct: 78  ELKFNEY 84

>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7 Length = 103

 Score = 55.7 bits (134), Expect = 5e-10
 Identities = 17/81 (20%), Positives = 36/81 (44%), Gaps = 10/81 (12%)

Query: 438 LRLCFQMYDIDRSGCITKEEVASMLRAL---------PDDCLPVDITEPGKL-DEIFDLM 487
            +  F ++DI+  G + ++E+ ++              +D +     E  ++ + +   +
Sbjct: 22  PKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNV 81

Query: 488 DANNDGKVTFDEFRAAMQRDS 508
           D N D  VT +EF A+ QR  
Sbjct: 82  DTNQDRLVTLEEFLASTQRKE 102

>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A Length = 90

 Score = 54.9 bits (133), Expect = 6e-10
 Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 6/69 (8%)

Query: 438 LRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTF 497
            +  F M+D D  G I+ +E+ +++R L  +      T+  +LD I + +D +  G + F
Sbjct: 22  FKAAFDMFDADGGGDISTKELGTVMRMLGQNP-----TK-EELDAIIEEVDEDGSGTIDF 75

Query: 498 DEFRAAMQR 506
           +EF   M R
Sbjct: 76  EEFLVMMVR 84

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 59.4 bits (144), Expect = 8e-10
 Identities = 26/124 (20%), Positives = 47/124 (37%), Gaps = 19/124 (15%)

Query: 150 QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVV------- 202
           ++ + L  +H+   VH D+K  N L L  +    + + D+GLS    Y            
Sbjct: 159 RMLDVLEYIHENEYVHGDIKAAN-LLLGYKNPDQVYLADYGLSYR--YCPNGNHKQYQEN 215

Query: 203 ---GLFGSIDYVSPEALLQDRITSKSDMWSLG-VILYILL-----SGYPPFIAQSNRQKQ 253
              G  G+I++ S +A     ++ +SD+  LG  +L  L                   K 
Sbjct: 216 PRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKT 275

Query: 254 QMIM 257
            ++ 
Sbjct: 276 NLLD 279

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364

 Score = 59.4 bits (144), Expect = 8e-10
 Identities = 28/124 (22%), Positives = 50/124 (40%), Gaps = 22/124 (17%)

Query: 150 QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVV------- 202
           +I + L  +H+   VH D+K  N L LN +    + ++D+GL+    Y    V       
Sbjct: 160 RILDILEYIHEHEYVHGDIKASN-LLLNYKNPDQVYLVDYGLAYR--YCPEGVHKAYAAD 216

Query: 203 ---GLFGSIDYVSPEALL---QDRITSKSDMWSLGVILYILLSGYPP---FIAQSNRQKQ 253
                 G+I++ S +A       R   + D+  LG  +   L+G+ P    +      + 
Sbjct: 217 PKRCHDGTIEFTSIDAHNGVAPSR---RGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRD 273

Query: 254 QMIM 257
             I 
Sbjct: 274 SKIR 277

>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 142

 Score = 56.0 bits (136), Expect = 9e-10
 Identities = 26/149 (17%), Positives = 54/149 (36%), Gaps = 15/149 (10%)

Query: 361 EEEIQNLRIHFRTICANGDNA-TLSEFEEVLKAMNMSSLVPLAPRIFDL---FDNNRDGT 416
           ++++   +  F    +      T    + VLK   +           ++    D   +G 
Sbjct: 2   DDQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVR---VEPAAFNEMFNEADATGNGK 58

Query: 417 VDMREILCGFSS-LRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDIT 475
           +   E L      ++++  +D LR  F+ +D + +G I K  +   L  L D   P +  
Sbjct: 59  IQFPEFLSMMGRRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEF- 117

Query: 476 EPGKLDEIFDLMDANNDGKVTFDEFRAAM 504
                 E   + +    G++ +D F   M
Sbjct: 118 -----AEFLGITE-TEKGQIRYDNFINTM 140

>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 142

 Score = 53.3 bits (129), Expect = 9e-09
 Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 18/75 (24%)

Query: 438 LRLCFQMYDIDRSGCITKEEVASMLRAL---PDDCLPVDITEPGKLDEIFDLM---DANN 491
            +  F+++D +R+G ITKE + ++L+      +                 ++    DA  
Sbjct: 8   FKEAFELFDSERTGFITKEGLQTVLKQFGVRVEP------------AAFNEMFNEADATG 55

Query: 492 DGKVTFDEFRAAMQR 506
           +GK+ F EF + M R
Sbjct: 56  NGKIQFPEFLSMMGR 70

>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C* Length = 149

 Score = 55.6 bits (135), Expect = 1e-09
 Identities = 22/158 (13%), Positives = 61/158 (38%), Gaps = 23/158 (14%)

Query: 358 DLNEEEIQNLRIHFRTICANGDNA-TLSEFEEVLKAMNMSSLVPLAPRIFDLF-----DN 411
           + ++    + +  F      GD   T S+  ++ +A+  +   P    I  +      + 
Sbjct: 1   EFSKAAADDFKEAFLLFDRTGDAKITASQVGDIARALGQN---PTNAEINKILGNPSKEE 57

Query: 412 NRDGTVDMRE---ILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDD 468
                +   E   +L   ++ +     +      +++D + +G +   E+  +L  L + 
Sbjct: 58  MNAAAITFEEFLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGE- 116

Query: 469 CLPVDITEPGKLDEIFDLMDA--NNDGKVTFDEFRAAM 504
                +TE    +E+ +LM    +++G + ++ F   +
Sbjct: 117 ----KMTE----EEVEELMKGQEDSNGCINYEAFVKHI 146

>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C* Length = 149

 Score = 49.1 bits (118), Expect = 3e-07
 Identities = 18/77 (23%), Positives = 29/77 (37%), Gaps = 20/77 (25%)

Query: 438 LRLCFQMYDIDRSGCITKEEVASMLRAL---PDDCLPVDITEPGKLDEIFDLM-----DA 489
            +  F ++D      IT  +V  + RAL   P        T      EI  ++     + 
Sbjct: 10  FKEAFLLFDRTGDAKITASQVGDIARALGQNP--------TN----AEINKILGNPSKEE 57

Query: 490 NNDGKVTFDEFRAAMQR 506
            N   +TF+EF   +Q 
Sbjct: 58  MNAAAITFEEFLPMLQA 74

>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C* Length = 149

 Score = 46.4 bits (111), Expect = 3e-06
 Identities = 19/105 (18%), Positives = 38/105 (36%), Gaps = 11/105 (10%)

Query: 406 FDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDR--SGCITKEEVASMLR 463
           F LFD   D  +   ++     +L ++  +  +         +   +  IT EE   ML+
Sbjct: 14  FLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITFEEFLPMLQ 73

Query: 464 ALPDDCLPVDITEPGKLDEI---FDLMDANNDGKVTFDEFRAAMQ 505
           A  ++       + G  ++      + D   +G V   E R  + 
Sbjct: 74  AAANN------KDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLA 112

>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana} Length = 135

 Score = 55.0 bits (133), Expect = 2e-09
 Identities = 15/110 (13%), Positives = 29/110 (26%), Gaps = 14/110 (12%)

Query: 404 RIFDLFDNNRDGTVDMREILCGFSSL--RKSQGDDA---LRLCFQMYDIDRSGCITKEEV 458
            +     +         +       +   K   ++    L   F +        IT E +
Sbjct: 7   SMLLETTSTTKMETKYED----MLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESL 62

Query: 459 ASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDS 508
                 L  + +  +         +    D + DG +   EF   M R S
Sbjct: 63  RRNSGILGIEGMSKE-----DAQGMVREGDLDGDGALNQTEFCVLMVRLS 107

>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 145

 Score = 54.8 bits (133), Expect = 2e-09
 Identities = 20/135 (14%), Positives = 44/135 (32%), Gaps = 41/135 (30%)

Query: 405 IFDLFDNNRDGTVDMREI-----------------------------------LCGFSSL 429
            F +FD + DG V + E+                                   +      
Sbjct: 10  CFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQLNAKEFDLATFKTVYRKPIK 69

Query: 430 RKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDA 489
             ++    +   F+  D + +G I + E+  +L  L D       T   +++E+   +  
Sbjct: 70  TPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDAL-----TSS-EVEELMKEVSV 123

Query: 490 NNDGKVTFDEFRAAM 504
           + DG + ++ F   +
Sbjct: 124 SGDGAINYESFVDML 138

>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 145

 Score = 46.8 bits (112), Expect = 2e-06
 Identities = 16/72 (22%), Positives = 31/72 (43%), Gaps = 15/72 (20%)

Query: 438 LRLCFQMYDIDRSGCITKEEVASMLRAL---PDDCLPVDITEPGKLDEIFDLMDANNDGK 494
           ++ CFQ++D D  G ++ EE+ S LR+L   P +             E+  +    N  +
Sbjct: 7   IQECFQIFDKDNDGKVSIEELGSALRSLGKNPTN------------AELNTIKGQLNAKE 54

Query: 495 VTFDEFRAAMQR 506
                F+   ++
Sbjct: 55  FDLATFKTVYRK 66

>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ... Length = 156

 Score = 55.2 bits (134), Expect = 3e-09
 Identities = 23/132 (17%), Positives = 40/132 (30%), Gaps = 40/132 (30%)

Query: 406 FDLFDNNRDGTVDMREILCGFSSL------------------------------RKSQGD 435
           F + D +RDG V   +I      L                               K  G 
Sbjct: 24  FSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAPGPLNFTMFLSIFSDKLSGT 83

Query: 436 DA---LRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANND 492
           D+   +R  F M+D   +  +  E +  +L  + D+    ++         F        
Sbjct: 84  DSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEM------RMTFKEAPV-EG 136

Query: 493 GKVTFDEFRAAM 504
           GK  + +F A +
Sbjct: 137 GKFDYVKFTAMI 148

>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ... Length = 156

 Score = 49.0 bits (118), Expect = 3e-07
 Identities = 18/84 (21%), Positives = 35/84 (41%), Gaps = 17/84 (20%)

Query: 426 FSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRAL---PDDCLPVDITEPGKLDE 482
            + L + Q  + ++  F M D+DR G ++KE++ ++   L   PDD             E
Sbjct: 9   LTKLPQKQIQE-MKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDD------------KE 55

Query: 483 IFDLMDANNDGKVTFDEFRAAMQR 506
           +  ++     G + F  F +    
Sbjct: 56  LTAML-KEAPGPLNFTMFLSIFSD 78

>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia} Length = 196

 Score = 55.8 bits (135), Expect = 3e-09
 Identities = 19/134 (14%), Positives = 42/134 (31%), Gaps = 40/134 (29%)

Query: 406 FDLFDNNRDGTVDMREILCGFSSL------------------------------RKSQGD 435
           F L D ++DG +   +I   F SL                               +  G 
Sbjct: 63  FQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEAPGPINFTMFLTIFGDRIAGT 122

Query: 436 DA---LRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANND 492
           D    +   F ++D +  G   +E +   L    +       ++  ++D+       + +
Sbjct: 123 DEEDVIVNAFNLFD-EGDGKCKEETLKRSLTTWGEK-----FSQD-EVDQALSEAPIDGN 175

Query: 493 GKVTFDEFRAAMQR 506
           G +   +F   + +
Sbjct: 176 GLIDIKKFAQILTK 189

>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia} Length = 196

 Score = 48.5 bits (116), Expect = 8e-07
 Identities = 16/84 (19%), Positives = 30/84 (35%), Gaps = 17/84 (20%)

Query: 426 FSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRAL---PDDCLPVDITEPGKLDE 482
           F+   + Q  +  +  FQ+ D D+ G I+K ++ +   +L     +             E
Sbjct: 48  FAMFTQHQVQE-FKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTE------------QE 94

Query: 483 IFDLMDANNDGKVTFDEFRAAMQR 506
           +   M A   G + F  F      
Sbjct: 95  LDS-MVAEAPGPINFTMFLTIFGD 117

>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus} Length = 77

 Score = 52.9 bits (128), Expect = 3e-09
 Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 12/72 (16%)

Query: 438 LRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLM---DANNDGK 494
           ++  F ++D +++G I   E+   +RAL       D+ +     EI +LM   D   +G 
Sbjct: 9   IKEAFDLFDTNKTGSIDYHELKVAMRALGF-----DVKK----PEILELMNEYDREGNGY 59

Query: 495 VTFDEFRAAMQR 506
           + FD+F   M  
Sbjct: 60  IGFDDFLDIMTE 71

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352

 Score = 57.8 bits (140), Expect = 3e-09
 Identities = 26/124 (20%), Positives = 48/124 (38%), Gaps = 22/124 (17%)

Query: 150 QIAEGLAALHQANIVHRDLKPENCLFLNDRED-SPLKIMDFGLSS--------VEGYTDP 200
           ++ + L  LH+   VH ++  EN     D ED S + +  +G +         V      
Sbjct: 167 RLLDALEFLHENEYVHGNVTAEN--IFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGS 224

Query: 201 VVGLFGSIDYVSPEALL---QDRITSKSDMWSLG-VILYILLSGYPP---FIAQSNRQKQ 253
                G ++++S +        R   +SD+ SLG  +L   L G+ P    +  +    +
Sbjct: 225 RSPHEGDLEFISMDLHKGCGPSR---RSDLQSLGYCMLK-WLYGFLPWTNCLPNTEDIMK 280

Query: 254 QMIM 257
           Q   
Sbjct: 281 QKQK 284

>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5 Length = 140

 Score = 54.4 bits (132), Expect = 3e-09
 Identities = 14/75 (18%), Positives = 30/75 (40%), Gaps = 10/75 (13%)

Query: 438 LRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTF 497
            +  F ++D   +G I K  +  +LRA        + T      EI + +++    +V  
Sbjct: 7   YKQAFSLFDRHGTGRIPKTSIGDLLRA-----CGQNPTL----AEITE-IESTLPAEVDM 56

Query: 498 DEFRAAMQRDSSLQD 512
           ++F   + R +    
Sbjct: 57  EQFLQVLNRPNGFDM 71

>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5 Length = 140

 Score = 51.3 bits (124), Expect = 4e-08
 Identities = 23/134 (17%), Positives = 42/134 (31%), Gaps = 42/134 (31%)

Query: 406 FDLFDNNRDGTVDMREILCGFSSL------------------------------RKSQGD 435
           F LFD +  G +    I     +                               R +  D
Sbjct: 11  FSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIESTLPAEVDMEQFLQVLNRPNGFD 70

Query: 436 DA-----LRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDAN 490
                      FQ++D D +G I   E+  +L +L +       +   ++DE+   +   
Sbjct: 71  MPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKL-----SNE-EMDELLKGVP-V 123

Query: 491 NDGKVTFDEFRAAM 504
            DG V + +F   +
Sbjct: 124 KDGMVNYHDFVQMI 137

>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A Length = 146

 Score = 54.5 bits (132), Expect = 3e-09
 Identities = 18/154 (11%), Positives = 50/154 (32%), Gaps = 20/154 (12%)

Query: 358 DLNEEEIQNLRIHFRTICANGDNA-TLSEFEEVLKAMNMSSLVPLAPRIFDL--FDNNRD 414
              EE++    +       +     ++       + + ++      P   D         
Sbjct: 8   QQLEEKVDESDVRIYFNEKSSGGKISIDNASYNARKLGLA------PSSIDEKKIKELYG 61

Query: 415 GTVDMREILCGFSSLRKSQG-DDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVD 473
             +   + L   S     +   + L   F  +D + +G +TK ++ ++L    D      
Sbjct: 62  DNLTYEQYLEYLSICVHDKDNVEELIKMFAHFDNNCTGYLTKSQMKNILTTWGD-----A 116

Query: 474 ITEPGKLDEIFDLM-DANNDGKVTFDEFRAAMQR 506
           +T+     E  D +   +++  + +  F   + +
Sbjct: 117 LTD----QEAIDALNAFSSEDNIDYKLFCEDILQ 146

>1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A Length = 96

 Score = 53.2 bits (128), Expect = 3e-09
 Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 2/65 (3%)

Query: 436 DALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKV 495
           + +   F  +  D+ G +TKE++  ++       L  +  +P  +D+I   +D   DGKV
Sbjct: 9   ETMMFTFHKFAGDK-GYLTKEDLRVLMEKEFPGFLE-NQKDPLAVDKIMKDLDQCRDGKV 66

Query: 496 TFDEF 500
            F  F
Sbjct: 67  GFQSF 71

>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 Length = 95

 Score = 52.8 bits (127), Expect = 4e-09
 Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 8/63 (12%)

Query: 442 FQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFR 501
           F   D D  G ++  EV  +        LP  +     L  I+ L D  + GK++ D+F 
Sbjct: 16  FLKTDKDMDGFVSGLEVREIFLKT---GLPSTL-----LAHIWSLCDTKDCGKLSKDQFA 67

Query: 502 AAM 504
            A 
Sbjct: 68  LAF 70

>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens} Length = 107

 Score = 52.8 bits (127), Expect = 7e-09
 Identities = 10/69 (14%), Positives = 26/69 (37%), Gaps = 6/69 (8%)

Query: 438 LRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTF 497
            +  +  +D++ +G I    +  ML  L         T   +L ++   + + +    ++
Sbjct: 34  FKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPK-----TH-LELKKLIGEVSSGSGETFSY 87

Query: 498 DEFRAAMQR 506
            +F   M  
Sbjct: 88  PDFLRMMLG 96

>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens} Length = 111

 Score = 52.8 bits (127), Expect = 7e-09
 Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 12/65 (18%)

Query: 442 FQMYDIDRSGCITKEEVASMLRA--LPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDE 499
           F  +D   SG +T  +  ++L    LP            +L  I++L D + DGK+T +E
Sbjct: 20  FNSHDKTMSGHLTGPQARTILMQSSLPQA----------QLASIWNLSDIDQDGKLTAEE 69

Query: 500 FRAAM 504
           F  AM
Sbjct: 70  FILAM 74

>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A Length = 148

 Score = 53.0 bits (128), Expect = 1e-08
 Identities = 19/144 (13%), Positives = 46/144 (31%), Gaps = 49/144 (34%)

Query: 406 FDLFDNNRDGTVDMREILCGFSSL-----------------------------------R 430
           F LFD    G +    +     ++                                    
Sbjct: 10  FTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEV 69

Query: 431 KSQGDDA--------LRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDE 482
             +  DA            FQ++D + +G ++  ++  ML  L +     ++      DE
Sbjct: 70  NEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEV------DE 123

Query: 483 IFDLMDANNDGKVTFDEFRAAMQR 506
           +   ++ +++G++ + +F   + R
Sbjct: 124 LLKGVEVDSNGEIDYKKFIEDVLR 147

>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A Length = 148

 Score = 52.2 bits (126), Expect = 2e-08
 Identities = 13/82 (15%), Positives = 29/82 (35%), Gaps = 19/82 (23%)

Query: 438 LRLCFQMYDIDRSGCITKEEVASMLRAL---PDDCLPVDITEPGKLDEIFDLM----DAN 490
            +  F ++D    G I K+ +   LRA+   P +              + D++       
Sbjct: 6   NKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTN------------QLVQDIINADSSLR 53

Query: 491 NDGKVTFDEFRAAMQRDSSLQD 512
           +   +T D+    ++ +    D
Sbjct: 54  DASSLTLDQITGLIEVNEKELD 75

>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus} Length = 94

 Score = 51.5 bits (124), Expect = 1e-08
 Identities = 20/87 (22%), Positives = 41/87 (47%), Gaps = 6/87 (6%)

Query: 418 DMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEP 477
              E L   S ++ +  ++ +R  F++ D D +G I+  E+  ++  L +     +    
Sbjct: 11  SSGENLYFQSLMKDTDSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEE---- 66

Query: 478 GKLDEIFDLMDANNDGKVTFDEFRAAM 504
             +DE+    D + DG+V ++EF   M
Sbjct: 67  --VDEMIREADIDGDGQVNYEEFVQMM 91

>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A* Length = 93

 Score = 51.0 bits (122), Expect = 2e-08
 Identities = 14/67 (20%), Positives = 25/67 (37%), Gaps = 3/67 (4%)

Query: 436 DALRLCFQMYDI--DRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDG 493
           D +   F  Y         + K E+  +L       L    T+     ++   +D+N D 
Sbjct: 10  DVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLG-KRTDEAAFQKLMSNLDSNRDN 68

Query: 494 KVTFDEF 500
           +V F E+
Sbjct: 69  EVDFQEY 75

>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens} Length = 104

 Score = 51.0 bits (122), Expect = 2e-08
 Identities = 14/67 (20%), Positives = 25/67 (37%), Gaps = 3/67 (4%)

Query: 436 DALRLCFQMY--DIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDG 493
           D +   F  Y         + K E+  +L       L    T+     ++   +D+N D 
Sbjct: 13  DVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSWLG-KRTDEAAFQKLMSNLDSNRDN 71

Query: 494 KVTFDEF 500
           +V F E+
Sbjct: 72  EVDFQEY 78

>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6 Length = 92

 Score = 50.5 bits (121), Expect = 2e-08
 Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 8/64 (12%)

Query: 442 FQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFR 501
           F+    D +G I                LP+       L  I++L D + DG +T DEF 
Sbjct: 15  FKTIQPDLNGFIPGSAAKEFFTKS---KLPILE-----LSHIWELSDFDKDGALTLDEFC 66

Query: 502 AAMQ 505
           AA  
Sbjct: 67  AAFH 70

>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max} Length = 92

 Score = 50.3 bits (121), Expect = 3e-08
 Identities = 15/75 (20%), Positives = 35/75 (46%), Gaps = 6/75 (8%)

Query: 438 LRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTF 497
           L+  F+++D D++G I+  E+  ++  L +     ++      +++    D + DG+V +
Sbjct: 11  LKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEV------EQMIKEADLDGDGQVNY 64

Query: 498 DEFRAAMQRDSSLQD 512
           +EF   M        
Sbjct: 65  EEFVKMMMTVRGGGG 79

>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ... Length = 156

 Score = 51.8 bits (125), Expect = 3e-08
 Identities = 30/158 (18%), Positives = 63/158 (39%), Gaps = 24/158 (15%)

Query: 359 LNEEEIQNLRIHFRT--ICANGDNA-TLSEFEEVLKAMNMSSLVPLAPRIFDL-----FD 410
           L+++EI +L+  F         D A    +  +V + + ++      PR  D+       
Sbjct: 3   LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGIN------PRNEDVFAVGGTH 56

Query: 411 NNRDGTVDMREILCGFSSLRKSQGDDA--LRLCFQMYDIDRSGCITKEEVASMLRALPDD 468
              + ++   E L  +  L   +          F+ +D +  G I+  E+  +L AL + 
Sbjct: 57  KMGEKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGE- 115

Query: 469 CLPVDITEPGKLDEIFDLMDAN--NDGKVTFDEFRAAM 504
                +++   +DEI  L D     +G V +++F   +
Sbjct: 116 ----RLSDE-DVDEIIKLTDLQEDLEGNVKYEDFVKKV 148

>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ... Length = 156

 Score = 47.5 bits (114), Expect = 1e-06
 Identities = 11/71 (15%), Positives = 27/71 (38%), Gaps = 9/71 (12%)

Query: 438 LRLCFQMYDI--DRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKV 495
           L+  F+++D    R G +   ++  + R L      ++      +  +        +  +
Sbjct: 11  LKDVFELFDFWDGRDGAVDAFKLGDVCRCLG-----INPRN-EDVFAVGG-THKMGEKSL 63

Query: 496 TFDEFRAAMQR 506
            F+EF  A + 
Sbjct: 64  PFEEFLPAYEG 74

>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6 Length = 110

 Score = 50.5 bits (121), Expect = 3e-08
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 8/63 (12%)

Query: 442 FQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFR 501
           F+    D S  I+     +         L +       L  I++L DA+ DG +T  EF 
Sbjct: 28  FRSLQPDPSSFISGSVAKNFFTKS---KLSIPE-----LSYIWELSDADCDGALTLPEFC 79

Query: 502 AAM 504
           AA 
Sbjct: 80  AAF 82

>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A Length = 147

 Score = 51.1 bits (122), Expect = 5e-08
 Identities = 12/74 (16%), Positives = 29/74 (39%), Gaps = 12/74 (16%)

Query: 436 DALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLM---DANND 492
           +A ++ +  +D++ +G I    +  ML  L           P    E+  L+    + ++
Sbjct: 48  EAFKVKYMEFDLNGNGDIDIMSLKRMLEKL---------GVPKTHLELKRLIREVSSGSE 98

Query: 493 GKVTFDEFRAAMQR 506
              ++ +F   M  
Sbjct: 99  ETFSYSDFLRMMLG 112

>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A* Length = 113

 Score = 50.3 bits (120), Expect = 5e-08
 Identities = 12/67 (17%), Positives = 29/67 (43%), Gaps = 2/67 (2%)

Query: 436 DALRLCFQMYDI--DRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDG 493
           + +   F  Y +       + + E   ++R    + L  +      ++ I + +D N D 
Sbjct: 12  ETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADK 71

Query: 494 KVTFDEF 500
           +++F+EF
Sbjct: 72  QLSFEEF 78

>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A Length = 150

 Score = 51.0 bits (122), Expect = 6e-08
 Identities = 10/74 (13%), Positives = 24/74 (32%), Gaps = 12/74 (16%)

Query: 436 DALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLM---DANND 492
            A +  +  +D++  G I    +  M+  L           P    E+  ++        
Sbjct: 50  TAFKEKYMEFDLNNEGEIDLMSLKRMMEKL---------GVPKTHLEMKKMISEVTGGVS 100

Query: 493 GKVTFDEFRAAMQR 506
             +++ +F   M  
Sbjct: 101 DTISYRDFVNMMLG 114

>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A Length = 113

 Score = 49.9 bits (119), Expect = 7e-08
 Identities = 14/67 (20%), Positives = 25/67 (37%), Gaps = 3/67 (4%)

Query: 436 DALRLCFQMY--DIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDG 493
           D +   F  Y         + K E+  +L       L    T+     ++   +D+N D 
Sbjct: 22  DVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLG-KRTDEAAFQKLMSNLDSNRDN 80

Query: 494 KVTFDEF 500
           +V F E+
Sbjct: 81  EVDFQEY 87

>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group} Length = 179

 Score = 51.2 bits (122), Expect = 8e-08
 Identities = 29/146 (19%), Positives = 51/146 (34%), Gaps = 13/146 (8%)

Query: 371 FRTICANGDNATLSEFEEVLKAMNMSSLVPLAPRIFDL---FDNNRDGTVDMREILCGFS 427
           F  +  +G     S F +    + M      A ++FD            +   E+   + 
Sbjct: 34  FNQLQVDG-VLLRSRFGK---CIGMDGSDEFAVQMFDSLARKRGIVKQVLTKDELKDFYE 89

Query: 428 SLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPD----DCLPVDITEPGKLDEI 483
            L     D+ LR  F M D +  G +T EEV  ++           +     E   L  I
Sbjct: 90  QLTDQGFDNRLRTFFDMVDKNADGRLTAEEVKEIIALSASANKLSKIKERADEYTAL--I 147

Query: 484 FDLMDANNDGKVTFDEFRAAMQRDSS 509
            + +D  N G +  ++  A + +  S
Sbjct: 148 MEELDPTNLGYIEMEDLEALLLQSPS 173

>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A Length = 165

 Score = 50.4 bits (121), Expect = 1e-07
 Identities = 18/106 (16%), Positives = 37/106 (34%), Gaps = 14/106 (13%)

Query: 408 LFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPD 467
           + D +  G +        +++L         +  F   D D SG +   E+   +  +  
Sbjct: 48  MLDRDHTGKMGFNAFKELWAALNA------WKENFMTVDQDGSGTVEHHELRQAIGLMGY 101

Query: 468 DCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDSSLQDV 513
                    P  L  I      + +G++ FD++ A   +  +L D 
Sbjct: 102 RL------SPQTLTTIVK--RYSKNGRIFFDDYVACCVKLRALTDF 139

>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A Length = 165

 Score = 41.2 bits (97), Expect = 2e-04
 Identities = 12/81 (14%), Positives = 31/81 (38%), Gaps = 10/81 (12%)

Query: 437 ALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDE----IFDLMDANND 492
           ++   F      + G +  EE+   L         ++ T      E    +  ++D ++ 
Sbjct: 1   SVYTYFSAVA-GQDGEVDAEELQRCLTQSG-----INGTYSPFSLETCRIMIAMLDRDHT 54

Query: 493 GKVTFDEFRAAMQRDSSLQDV 513
           GK+ F+ F+      ++ ++ 
Sbjct: 55  GKMGFNAFKELWAALNAWKEN 75

>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A Length = 198

 Score = 51.3 bits (123), Expect = 1e-07
 Identities = 32/163 (19%), Positives = 59/163 (36%), Gaps = 29/163 (17%)

Query: 361 EEEIQNLRIHFRTICANGDNA-TLSEFEEVLKAMNMSSLV-PLAPR----IFDLFDNNRD 414
            +    L  +F  + A  D      E +  L    ++    P        +  + D +  
Sbjct: 29  GQTQDPLYGYFAAV-AGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMS 87

Query: 415 GTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDI 474
           GT+   E    F  L      +  R  F  +D DRSG +  +E+   L  +         
Sbjct: 88  GTMGFNE----FKELWAVL--NGWRQHFISFDTDRSGTVDPQELQKALTTM--------- 132

Query: 475 TEPG-KL-DEIFDLM--DANNDGKVTFDEFRAAMQRDSSLQDV 513
              G +L  +  + +    + +GK+TFD++ A   +  +L D 
Sbjct: 133 ---GFRLSPQAVNSIAKRYSTNGKITFDDYIACCVKLRALTDS 172

>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A Length = 93

 Score = 47.9 bits (114), Expect = 2e-07
 Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 3/67 (4%)

Query: 436 DALRLCFQMYDIDRSGC--ITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDG 493
           + L   F  +         ++K+E+  +L+      L     +   +D+I   +D N DG
Sbjct: 9   ETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLD-VQKDADAVDKIMKELDENGDG 67

Query: 494 KVTFDEF 500
           +V F EF
Sbjct: 68  EVDFQEF 74

>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8 Length = 167

 Score = 49.7 bits (119), Expect = 2e-07
 Identities = 23/108 (21%), Positives = 44/108 (40%), Gaps = 18/108 (16%)

Query: 408 LFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPD 467
           + D +  GT+   E    ++ L         R  F  +D DRSG +  +E   + +AL  
Sbjct: 50  MLDRDMSGTMGFNEFKELWAVLNG------WRQHFISFDSDRSGTVDPQE---LQKALTT 100

Query: 468 DCLPVDITEPGKLDEIFDLM--DANNDGKVTFDEFRAAMQRDSSLQDV 513
               ++        +  + +    +  GK+TFD++ A   +  +L D 
Sbjct: 101 MGFRLN-------PQTVNSIAKRYSTSGKITFDDYIACCVKLRALTDS 141

>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8 Length = 167

 Score = 44.7 bits (106), Expect = 1e-05
 Identities = 23/108 (21%), Positives = 37/108 (34%), Gaps = 19/108 (17%)

Query: 405 IFDLFDN--NRDGTVDMRE---IL--CGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEE 457
           ++  F +   +DG +D  E    L   G +   K    +  RL   M D D SG +   E
Sbjct: 4   LYGYFASVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNE 63

Query: 458 VASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQ 505
              +   L                + F   D++  G V   E + A+ 
Sbjct: 64  FKELWAVL------------NGWRQHFISFDSDRSGTVDPQELQKALT 99

>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8 Length = 167

 Score = 41.2 bits (97), Expect = 2e-04
 Identities = 14/81 (17%), Positives = 27/81 (33%), Gaps = 8/81 (9%)

Query: 436 DALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEI---FDLMDANND 492
           D L   F      + G I  +E+   L             +P  L+       ++D +  
Sbjct: 2   DPLYGYFASVA-GQDGQIDADELQRCLTQS----GIAGGYKPFNLETCRLMVSMLDRDMS 56

Query: 493 GKVTFDEFRAAMQRDSSLQDV 513
           G + F+EF+      +  +  
Sbjct: 57  GTMGFNEFKELWAVLNGWRQH 77

>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8 Length = 167

 Score = 40.8 bits (96), Expect = 2e-04
 Identities = 27/120 (22%), Positives = 47/120 (39%), Gaps = 22/120 (18%)

Query: 383 LSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCF 442
            +EF+E+   +N         + F  FD++R GTVD +E+    +++        +    
Sbjct: 61  FNEFKELWAVLNGWR------QHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIA 114

Query: 443 QMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTF--DEF 500
           + Y    SG IT ++  +    L              L + F   D+   G V F  D+F
Sbjct: 115 KRY--STSGKITFDDYIACCVKL------------RALTDSFRRRDSAQQGMVNFSYDDF 160

>2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A Length = 95

 Score = 47.9 bits (114), Expect = 2e-07
 Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 3/67 (4%)

Query: 436 DALRLCFQMYDI--DRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDG 493
           + +   F  Y +       ++K E+  +L     + +  +I +   +DEIF  +DAN D 
Sbjct: 12  EGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIK-NIKDKAVIDEIFQGLDANQDE 70

Query: 494 KVTFDEF 500
           +V F EF
Sbjct: 71  QVDFQEF 77

>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens} Length = 174

 Score = 49.2 bits (117), Expect = 4e-07
 Identities = 19/155 (12%), Positives = 51/155 (32%), Gaps = 16/155 (10%)

Query: 365 QNLRIHFRTICANGDNATLSEFEEVLKAMNMSSL------VPLAPRIFDLFDNNRDGTVD 418
            +   H   +   G +   ++ + +L    ++        +     +  L +   +G +D
Sbjct: 5   HHHHHHSSGLVPRGSDIDATQLQGLLNQELLTGPPGDMFSLDECRSLVALMELKVNGRLD 64

Query: 419 MREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPG 478
             E    +  L         +  FQ       G +   +   + +A+ +      I    
Sbjct: 65  QEEFARLWKRLVH------YQHVFQKVQ-TSPGVLLSSD---LWKAIENTDFLRGIFISR 114

Query: 479 KLDEIFDLMDANNDGKVTFDEFRAAMQRDSSLQDV 513
           +L  +  L  +++ G+V+F      + R  ++   
Sbjct: 115 ELLHLVTLRYSDSVGRVSFPSLVCFLMRLEAMAKT 149

>2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A Length = 92

 Score = 46.7 bits (111), Expect = 5e-07
 Identities = 10/67 (14%), Positives = 29/67 (43%), Gaps = 6/67 (8%)

Query: 436 DALRLCFQMY--DIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDG 493
             +   F  Y         ++++E+  +++      L +   +   +D++   +D N+D 
Sbjct: 10  TTMVTTFHKYSGREGSKLTLSRKELKELIKKE----LCLGEMKESSIDDLMKSLDKNSDQ 65

Query: 494 KVTFDEF 500
           ++ F E+
Sbjct: 66  EIDFKEY 72

>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A Length = 100

 Score = 46.7 bits (111), Expect = 8e-07
 Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 4/68 (5%)

Query: 436 DALRLCFQMYDIDRSGC---ITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANND 492
             L   F  Y    S     I+K     ML+   +  L  D       D++   +DAN+D
Sbjct: 11  IVLVENFYKYVSKYSLVKNKISKSSFREMLQKELNHMLS-DTGNRKAADKLIQNLDANHD 69

Query: 493 GKVTFDEF 500
           G+++FDE+
Sbjct: 70  GRISFDEY 77

>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ... Length = 92

 Score = 45.9 bits (109), Expect = 9e-07
 Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 3/67 (4%)

Query: 436 DALRLCFQMYDIDRSGC--ITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDG 493
            AL   F  Y         + K E+  ++       L  +I E   +D++ + +D+N DG
Sbjct: 9   VALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLE-EIKEQEVVDKVMETLDSNGDG 67

Query: 494 KVTFDEF 500
           +  F EF
Sbjct: 68  ECDFQEF 74

>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio} Length = 99

 Score = 45.6 bits (108), Expect = 2e-06
 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 3/67 (4%)

Query: 436 DALRLCFQMYDI--DRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDG 493
           DAL   F  Y         ++K E+  +L A   D L     +P  +++I + +D+N D 
Sbjct: 10  DALITVFHNYSGSEGDKYKLSKGELKELLNAELTDFLM-SQKDPMLVEKIMNDLDSNKDN 68

Query: 494 KVTFDEF 500
           +V F+EF
Sbjct: 69  EVDFNEF 75

>1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100 family, EF-hand protein, complex (ligand/annexin), ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2 PDB: 1nsh_A Length = 99

 Score = 45.2 bits (107), Expect = 2e-06
 Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 3/67 (4%)

Query: 436 DALRLCFQMY--DIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDG 493
           ++L   FQ +      +  I+K E    +          +  +PG LD +   +D ++DG
Sbjct: 13  ESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQ-NQKDPGVLDRMMKKLDLDSDG 71

Query: 494 KVTFDEF 500
           ++ F EF
Sbjct: 72  QLDFQEF 78

>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A Length = 95

 Score = 44.4 bits (105), Expect = 4e-06
 Identities = 15/67 (22%), Positives = 27/67 (40%), Gaps = 3/67 (4%)

Query: 436 DALRLCFQMYDI--DRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDG 493
             +   F  Y      +  +TK E+  ++       L     +   +D++   +DAN D 
Sbjct: 9   GMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQ-SGKDKDAVDKLLKDLDANGDA 67

Query: 494 KVTFDEF 500
           +V F EF
Sbjct: 68  QVDFSEF 74

>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A Length = 101

 Score = 44.5 bits (105), Expect = 4e-06
 Identities = 13/68 (19%), Positives = 25/68 (36%), Gaps = 5/68 (7%)

Query: 436 DALRLCFQMYDI--DRSGCITKEEVASMLRA-LPDDCLPVDITEPGKLDEIFDLMDANND 492
            A+   FQ Y         + + E+  +L+  L               ++   ++D N D
Sbjct: 10  AAIVCTFQEYAGRCGDKYKLCQAELKELLQKELAT--WTPTEFRECDYNKFMSVLDTNKD 67

Query: 493 GKVTFDEF 500
            +V F E+
Sbjct: 68  CEVDFVEY 75

>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A Length = 90

 Score = 43.6 bits (103), Expect = 7e-06
 Identities = 11/67 (16%), Positives = 27/67 (40%), Gaps = 5/67 (7%)

Query: 436 DALRLCFQMYDI--DRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDG 493
             L   F  Y         ++K+E+  +++    +       +  ++  + + +D N D 
Sbjct: 10  GLLVAIFHKYSGREGDKHTLSKKELKELIQ---KELTIGSKLQDAEIARLMEDLDRNKDQ 66

Query: 494 KVTFDEF 500
           +V F E+
Sbjct: 67  EVNFQEY 73

>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A Length = 624

 Score = 47.6 bits (112), Expect = 8e-06
 Identities = 20/121 (16%), Positives = 45/121 (37%), Gaps = 13/121 (10%)

Query: 404 RIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLR 463
                 D N+D  ++ +E+      L     D   R  F+  D  ++  +  EE+ +  +
Sbjct: 15  SCLRKADKNKDNKMNFKELKDFLKELNIQVDDGYARKIFRECDHSQTDSLEDEEIETFYK 74

Query: 464 ALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAM---QRDSSLQDVVLSSLRQ 520
            L         T+  ++D  F+   A +   ++ +     +   QR+      +  SL +
Sbjct: 75  ML---------TQRAEIDRAFE-EAAGSAETLSVERLVTFLQHQQREEEAGPALALSLIE 124

Query: 521 Q 521
           +
Sbjct: 125 R 125

>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A Length = 624

 Score = 46.8 bits (110), Expect = 1e-05
 Identities = 10/65 (15%), Positives = 23/65 (35%), Gaps = 6/65 (9%)

Query: 438 LRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTF 497
           +  C +  D ++   +  +E+   L+ L          + G   +IF   D +    +  
Sbjct: 13  IHSCLRKADKNKDNKMNFKELKDFLKELNIQV------DDGYARKIFRECDHSQTDSLED 66

Query: 498 DEFRA 502
           +E   
Sbjct: 67  EEIET 71

>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6 Length = 99

 Score = 42.9 bits (101), Expect = 1e-05
 Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 12/76 (15%)

Query: 432 SQGDDALRLCFQMYDIDRSGCITKEEVASMLRA--LPDDCLPVDITEPGKLDEIFDLMDA 489
           S G+      ++  +   +G +   + A+ L+   LPD            L +I+DL D 
Sbjct: 7   SSGNPVYEKYYRQVEAGNTGRVLALDAAAFLKKSGLPDL----------ILGKIWDLADT 56

Query: 490 NNDGKVTFDEFRAAMQ 505
           +  G ++  EF  A++
Sbjct: 57  DGKGVLSKQEFFVALR 72

>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7 Length = 105

 Score = 42.5 bits (100), Expect = 3e-05
 Identities = 15/129 (11%), Positives = 34/129 (26%), Gaps = 43/129 (33%)

Query: 381 ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRL 440
               +    L     S    +  + F+ FD  +  T+   E                 R 
Sbjct: 6   TADRDILARLHKAVTSHYHAIT-QEFENFDTMKTNTISREE----------------FRA 48

Query: 441 CFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEF 500
                       +T E+                       D +++ M  N  G++ + +F
Sbjct: 49  ICNRRVQI----LTDEQF----------------------DRLWNEMPVNAKGRLKYPDF 82

Query: 501 RAAMQRDSS 509
            +    +++
Sbjct: 83  LSRFSSETA 91

>3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A Length = 121

 Score = 42.5 bits (100), Expect = 3e-05
 Identities = 19/67 (28%), Positives = 27/67 (40%), Gaps = 13/67 (19%)

Query: 441 CFQMYDIDRSGCITKEEVASMLRA--LPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFD 498
            F       SG IT ++  +      LP             L +I+ L D NNDG++   
Sbjct: 38  QFHSLK-PISGFITGDQARNFFFQSGLPQP----------VLAQIWALADMNNDGRMDQV 86

Query: 499 EFRAAMQ 505
           EF  AM+
Sbjct: 87  EFSIAMK 93

>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A Length = 93

 Score = 40.9 bits (96), Expect = 5e-05
 Identities = 13/67 (19%), Positives = 25/67 (37%), Gaps = 7/67 (10%)

Query: 436 DALRLCFQMYDI--DRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDG 493
           +++   +  Y +       + ++++  +L        P         D  F  +D N DG
Sbjct: 10  NSIIDVYHKYSLIKGNFHAVYRDDLKKLLETE----SP-QYIRKKGADVWFKELDINTDG 64

Query: 494 KVTFDEF 500
            V F EF
Sbjct: 65  AVNFQEF 71

>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A Length = 106

 Score = 40.9 bits (96), Expect = 9e-05
 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 9/63 (14%)

Query: 442 FQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFR 501
           F       +G ++ ++V  +L    +  LPVDI     L  +++L D ++DG +  DEF 
Sbjct: 21  FDSLS-PVNGFLSGDKVKPVLL---NSKLPVDI-----LGRVWELSDIDHDGMLDRDEFA 71

Query: 502 AAM 504
            AM
Sbjct: 72  VAM 74

>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L Length = 714

 Score = 44.0 bits (103), Expect = 1e-04
 Identities = 19/105 (18%), Positives = 46/105 (43%), Gaps = 19/105 (18%)

Query: 405 IFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRA 464
           + D+ D +  G + ++E    ++ ++K       +  ++  D+DRSG +   E   M +A
Sbjct: 580 MVDMLDEDGSGKLGLKEFYILWTKIQK------YQKIYREIDVDRSGTMNSYE---MRKA 630

Query: 465 LPDDCLPVDITEPGKLDEIFDLMD---ANNDGKVTFDEFRAAMQR 506
           L +    +         ++  ++    A+++  + FD F   + R
Sbjct: 631 LEEAGFKLP-------CQLHQVIVARFADDELIIDFDNFVRCLVR 668

>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 Length = 900

 Score = 43.2 bits (101), Expect = 2e-04
 Identities = 34/224 (15%), Positives = 75/224 (33%), Gaps = 42/224 (18%)

Query: 295 ELLNHPWVIGDSAKEEEMDAEIVSRLQSFNARRKLRAAAIASVLSSTIFLRRTKKLKNLL 354
            L    +++  S  E   + + + R  S                + T  L    +     
Sbjct: 477 RLPPGEYIVVPSTFEPNKEGDFLLRFFSEKK-------------AGTQELDDQIQANLPD 523

Query: 355 GSHDLNEEEIQNLRIHFRTICANGDNATLSEFEEVLKAMNMSSLVPLAPRIFDL------ 408
                 EE   N +  F  +  +    ++ E + +L  + +S    L    F L      
Sbjct: 524 EKVLSEEEIDDNFKTLFSKLAGDDMEISVKELQTILNRI-ISKHKDLRTNGFSLESCRSM 582

Query: 409 ---FDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRAL 465
               D + +G + + E    ++ +R           F+ +D+D+SG ++  E   M  A+
Sbjct: 583 VNLMDRDGNGKLGLVEFNILWNRIRN------YLTIFRKFDLDKSGSMSAYE---MRMAI 633

Query: 466 PDDCLPVDITEPGKLDEIFDLMD---ANNDGKVTFDEFRAAMQR 506
                 +         ++  ++    A+++  + FD F   + R
Sbjct: 634 EAAGFKLP-------CQLHQVIVARFADDELIIDFDNFVRCLVR 670

>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 Length = 900

 Score = 42.1 bits (98), Expect = 5e-04
 Identities = 27/159 (16%), Positives = 60/159 (37%), Gaps = 29/159 (18%)

Query: 360 NEEEIQNLRIHFRTICANGDNATLSEFEEVLKAMNMSSLVPLAPRIFDL---------FD 410
             EE +  R  F  +  +    + +E   +L  + ++    L    F +          D
Sbjct: 726 ESEEERQFRKLFVQLAGDDMEVSATELMNILNKV-VTRHPDLKTDGFGIDTCRSMVAVMD 784

Query: 411 NNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCL 470
           ++  G +   E    +++++K QG       ++ ++ DRSG I   E   +  A      
Sbjct: 785 SDTTGKLGFEEFKYLWNNIKKWQG------IYKRFETDRSGTIGSNE---LPGAFEAAGF 835

Query: 471 PVDITEPGKLDEIFDLMD---ANNDGKVTFDEFRAAMQR 506
            ++         I+ ++    ++  G + FD F + + R
Sbjct: 836 HLN-------QHIYSMIIRRYSDETGNMDFDNFISCLVR 867

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	521
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	100.0
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	100.0
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	100.0
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	100.0
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	100.0
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	100.0
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	100.0
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	100.0
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	100.0
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	100.0
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	100.0
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	100.0
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	100.0
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	100.0
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	100.0
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	100.0
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	100.0
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	100.0
3bhy_A	283	Death-associated protein kinase 3; death associate	100.0
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	100.0
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	100.0
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	100.0
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	100.0
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	100.0
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	100.0
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	100.0
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	100.0
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	100.0
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	100.0
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	100.0
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	100.0
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	100.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	100.0
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	100.0
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	100.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	100.0
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	100.0
3rp9_A	458	Mitogen-activated protein kinase; structural genom	100.0
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	100.0
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	100.0
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	100.0
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	100.0
3ork_A	311	Serine/threonine protein kinase; structural genomi	100.0
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	100.0
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	100.0
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	100.0
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	100.0
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	100.0
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	100.0
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	100.0
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	100.0
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	100.0
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	100.0
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	100.0
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	100.0
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	100.0
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	100.0
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	100.0
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	100.0
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	100.0
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	100.0
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	100.0
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	100.0
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	100.0
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	100.0
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	100.0
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	100.0
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	100.0
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	100.0
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	100.0
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	100.0
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	100.0
3fme_A	290	Dual specificity mitogen-activated protein kinase;	100.0
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	100.0
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	100.0
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	100.0
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	100.0
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	100.0
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	100.0
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	100.0
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	100.0
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	100.0
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	100.0
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	100.0
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	100.0
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	100.0
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	100.0
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	100.0
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	100.0
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	100.0
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	100.0
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	100.0
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	100.0
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	100.0
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	100.0
3an0_A	340	Dual specificity mitogen-activated protein kinase;	100.0
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	100.0
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	100.0
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	100.0
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	100.0
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	100.0
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	100.0
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	100.0
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	100.0
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	100.0
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	100.0
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	100.0
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	100.0
2dyl_A	318	Dual specificity mitogen-activated protein kinase	100.0
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	100.0
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	100.0
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	100.0
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	100.0
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	100.0
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	100.0
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	100.0
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	100.0
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	100.0
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	100.0
3aln_A	327	Dual specificity mitogen-activated protein kinase;	100.0
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	100.0
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	100.0
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	100.0
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	100.0
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	100.0
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	100.0
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	100.0
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	100.0
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	100.0
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	100.0
2a19_B	284	Interferon-induced, double-stranded RNA-activated	100.0
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	100.0
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	100.0
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	100.0
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	100.0
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	100.0
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	100.0
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	100.0
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	100.0
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	100.0
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	100.0
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	100.0
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	100.0
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	100.0
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	100.0
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	100.0
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	100.0
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	100.0
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	100.0
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	100.0
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	100.0
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	100.0
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	100.0
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	100.0
3soc_A	322	Activin receptor type-2A; structural genomics cons	100.0
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	100.0
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	100.0
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	100.0
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	100.0
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	100.0
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	100.0
3q4u_A	301	Activin receptor type-1; structural genomics conso	100.0
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	100.0
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	100.0
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	100.0
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	100.0
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	100.0
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	100.0
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	100.0
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	100.0
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	100.0
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	100.0
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	100.0
3pls_A	298	Macrophage-stimulating protein receptor; protein k	100.0
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	100.0
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	100.0
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	100.0
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	100.0
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	100.0
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	100.0
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	100.0
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	100.0
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	100.0
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	100.0
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	100.0
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	100.0
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	100.0
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	100.0
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	100.0
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	100.0
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
3uqc_A	286	Probable conserved transmembrane protein; structur	100.0
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	100.0
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	100.0
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	100.0
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.95
3pm8_A	197	PFCDPK2, calcium-dependent protein kinase 2; malar	99.94
3k21_A	191	PFCDPK3, calcium-dependent protein kinase 3; calci	99.93
2lmt_A	148	Calmodulin-related protein 97A; spermatogenesis, m	99.92
2lhi_A	176	Calmodulin, serine/threonine-protein phosphatase c	99.92
3u0k_A	440	Rcamp; fluorescent protein, calcium binding, EF-ha	99.91
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.91
2obh_A	143	Centrin-2; DNA repair complex EF hand superfamily	99.91
3i5g_C	159	Myosin catalytic light chain LC-1, mantle muscle;	99.9
1exr_A	148	Calmodulin; high resolution, disorder, metal trans	99.89
3i5g_B	153	Myosin regulatory light chain LC-2, mantle muscle;	99.89
3qrx_A	169	Centrin; calcium-binding, EF-hand, cell division,	99.89
3fwb_A	161	Cell division control protein 31; gene gating, com	99.89
2jnf_A	158	Troponin C; stretch activated muscle contraction,	99.88
2bl0_C	142	Myosin regulatory light chain; muscle protein, sli	99.88
3ox6_A	153	Calcium-binding protein 1; EF-hand, calcium-sensor	99.88
4ds7_A	147	Calmodulin, CAM; protein binding, metal binding, s	99.88
1dtl_A	161	Cardiac troponin C; helix-turn-helix, structural p	99.87
1wdc_C	156	Scallop myosin; calcium binding protein, muscle pr	99.87
3khe_A	191	Calmodulin-like domain protein kinase isoform 3; c	99.87
2f2o_A	179	Calmodulin fused with calmodulin-binding domain of	99.87
3mse_B	180	Calcium-dependent protein kinase, putative; CDPKS,	99.86
2ovk_C	159	Myosin catalytic light chain LC-1, mantle muscle,	99.86
1m45_A	148	MLC1P, myosin light chain; protein-peptide complex	99.86
2mys_C	149	Myosin; muscle protein, motor protein; HET: MLY; 2	99.86
3j04_B	143	Myosin regulatory light chain 2, smooth muscle MA	99.86
1top_A	162	Troponin C; contractIle system protein; 1.78A {Gal	99.86
2aao_A	166	CDPK, calcium-dependent protein kinase, isoform AK	99.86
1nya_A	176	Calerythrin; EF-hand, metal binding protein; NMR {	99.86
3e3r_A	204	Calcyphosin, calcyphosine; human calcyphosine, EF-	99.85
2bec_A	202	Calcineurin B homologous protein 2; calcineurin-ho	99.85
3sjs_A	220	URE3-BP sequence specific DNA binding protein; EF-	99.85
1s6c_A	183	KV4 potassium channel-interacting protein kchip1B;	99.85
1w7j_B	151	Myosin light chain 1; motor protein, unconventiona	99.85
1s6i_A	188	CDPK, calcium-dependent protein kinase SK5; EF-han	99.85
2ccm_A	191	Calexcitin; EF hand, calcium, signaling protein; 1	99.84
2bl0_B	145	Myosin regulatory light chain; muscle protein, sli	99.84
2ovk_B	153	RLC, myosin regulatory light chain LC-2, mantle mu	99.84
2mys_B	166	Myosin; muscle protein, motor protein; HET: MLY; 2	99.84
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.84
1wdc_B	156	Scallop myosin; calcium binding protein, muscle pr	99.84
1jba_A	204	GCAP-2, protein (guanylate cyclase activating prot	99.84
1uhk_A	191	Aequorin 2, aequorin; EF-hand motif, complex, lumi	99.84
2zfd_A	226	Calcineurin B-like protein 2; calcium binding prot	99.84
3dd4_A	229	KV channel-interacting protein 4; EF-hands protein	99.84
1qv0_A	195	Obelin, OBL; photoprotein, bioluminescence, atomic	99.84
3ll8_B	155	Calcineurin subunit B type 1; protein-peptide dock	99.84
3dtp_E	196	RLC, myosin regulatory light chain; muscle protein	99.84
1s1e_A	224	KV channel interacting protein 1; kchip, calcium-b	99.83
2ehb_A	207	Calcineurin B-like protein 4; protein complex, Ca(	99.83
2l2e_A	190	Calcium-binding protein NCS-1; NCS1P, myristoylate	99.83
2l4h_A	214	Calcium and integrin-binding protein 1; metal bind	99.83
2d8n_A	207	Recoverin; structural genomics, NPPSFA, national p	99.83
2ct9_A	208	Calcium-binding protein P22; EF-hand, metal bindin	99.83
2hpk_A	208	Photoprotein berovin; structural genomics, PSI, pr	99.83
1dgu_A	183	Calcium-saturated CIB; helical, EF-hands, blood cl	99.82
2sas_A	185	Sarcoplasmic calcium-binding protein; 2.40A {Branc	99.82
1fpw_A	190	Yeast frequenin, calcium-binding protein NCS-1; EF	99.82
2r2i_A	198	Guanylyl cyclase-activating protein 1; EF hand, GC	99.82
1ij5_A	323	Plasmodial specific LAV1-2 protein; fourty kDa cal	99.82
3sg6_A	450	Gcamp2, myosin light chain kinase, green fluoresce	99.82
1y1x_A	191	Leishmania major homolog of programmed cell death	99.82
1g8i_A	190	Frequenin, neuronal calcium sensor 1; calcium bind	99.82
3akb_A	166	Putative calcium binding protein; EF-hand, metal b	99.82
2znd_A	172	Programmed cell death protein 6; penta-EF-hand pro	99.82
1bjf_A	193	Neurocalcin delta; calcium-binding, myristoylation	99.81
1jfj_A	134	Ehcabp, calcium-binding protein; EF-hand, helix-lo	99.81
2lvv_A	226	Flagellar calcium-binding protein TB-24; EF-hand,	99.81
1q80_A	174	SCP, sarcoplasmic calcium-binding protein; all-alp	99.81
1ggw_A	140	Protein (CDC4P); light chain, cytokinesis, cell cy	99.81
2ggz_A	211	Guanylyl cyclase-activating protein 3; EF hand, gu	99.8
3cs1_A	219	Flagellar calcium-binding protein; myristoylated,	99.8
2jul_A	256	Calsenilin; EF-hand, calcium, LXXLL, DNA binding p	99.8
1alv_A	173	Calpain, S-camld; calcium binding, calmodulin like	99.8
2qac_A	146	Myosin A tail domain interacting protein MTIP; mal	99.8
1juo_A	198	Sorcin; calcium-binding proteins, penta-EF-hand, P	99.78
1gjy_A	167	Sorcin, CP-22, V19; calcium binding, calcium-bindi	99.77
1k94_A	165	Grancalcin; penta-EF-hand protein, calcium binding	99.77
2i7a_A	174	Calpain 13; calcium-dependent cytoplasmic cysteine	99.76
2f33_A	263	Calbindin; EF-hand, Ca2+-binding, metal binding pr	99.76
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.76
3a8r_A	179	Putative uncharacterized protein; EF-hand, membran	99.76
2be4_A	272	Hypothetical protein LOC449832; DR.36843, BC083168	99.76
2hps_A	186	Coelenterazine-binding protein with bound coelent;	99.75
2f33_A	263	Calbindin; EF-hand, Ca2+-binding, metal binding pr	99.74
2be4_A	272	Hypothetical protein LOC449832; DR.36843, BC083168	99.73
1ij5_A	323	Plasmodial specific LAV1-2 protein; fourty kDa cal	99.73
3bow_A	714	Calpain-2 catalytic subunit; cysteine protease, in	99.69
2d8n_A	207	Recoverin; structural genomics, NPPSFA, national p	99.69
2znd_A	172	Programmed cell death protein 6; penta-EF-hand pro	99.67
1y1x_A	191	Leishmania major homolog of programmed cell death	99.66
3fs7_A	109	Parvalbumin, thymic; calcium-binding protein, EF-h	99.66
1bu3_A	109	Calcium-binding protein; 1.65A {Merluccius bilinea	99.65
5pal_A	109	Parvalbumin; calcium-binding protein; 1.54A {Triak	99.64
2pvb_A	108	Protein (parvalbumin); calcium binding protein, me	99.64
2l2e_A	190	Calcium-binding protein NCS-1; NCS1P, myristoylate	99.64
2i7a_A	174	Calpain 13; calcium-dependent cytoplasmic cysteine	99.64
1rwy_A	109	Parvalbumin alpha; EF-hand, calcium-binding, calci	99.62
2lmt_A	148	Calmodulin-related protein 97A; spermatogenesis, m	99.62
1pva_A	110	Parvalbumin; calcium binding; 1.65A {Esox lucius}	99.62
1djx_A	624	PLC-D1, phosphoinositide-specific phospholipase C,	99.62
3u0k_A	440	Rcamp; fluorescent protein, calcium binding, EF-ha	99.62
3h4s_E	135	KCBP interacting Ca2+-binding protein; kinesin, mo	99.61
2lhi_A	176	Calmodulin, serine/threonine-protein phosphatase c	99.61
2obh_A	143	Centrin-2; DNA repair complex EF hand superfamily	99.61
1rro_A	108	RAT oncomodulin; calcium-binding protein; 1.30A {R	99.61
1sjj_A	863	Actinin; 3-helix bundle, calponin homology domain,	99.6
2bl0_C	142	Myosin regulatory light chain; muscle protein, sli	99.6
3sjs_A	220	URE3-BP sequence specific DNA binding protein; EF-	99.6
1alv_A	173	Calpain, S-camld; calcium binding, calmodulin like	99.58
1bjf_A	193	Neurocalcin delta; calcium-binding, myristoylation	99.57
1exr_A	148	Calmodulin; high resolution, disorder, metal trans	99.57
1m45_A	148	MLC1P, myosin light chain; protein-peptide complex	99.57
2ggz_A	211	Guanylyl cyclase-activating protein 3; EF hand, gu	99.56
1s6c_A	183	KV4 potassium channel-interacting protein kchip1B;	99.56
3i5g_C	159	Myosin catalytic light chain LC-1, mantle muscle;	99.56
1gjy_A	167	Sorcin, CP-22, V19; calcium binding, calcium-bindi	99.56
2jnf_A	158	Troponin C; stretch activated muscle contraction,	99.55
1k94_A	165	Grancalcin; penta-EF-hand protein, calcium binding	99.55
3fwb_A	161	Cell division control protein 31; gene gating, com	99.55
1fpw_A	190	Yeast frequenin, calcium-binding protein NCS-1; EF	99.55
4ds7_A	147	Calmodulin, CAM; protein binding, metal binding, s	99.54
1eg3_A	261	Dystrophin; EF-hand like domain, WW domain, struct	99.54
2ehb_A	207	Calcineurin B-like protein 4; protein complex, Ca(	99.54
3qrx_A	169	Centrin; calcium-binding, EF-hand, cell division,	99.53
1qxp_A	900	MU-like calpain; M-calpain, MU-calpain, catalytic	99.53
1jfj_A	134	Ehcabp, calcium-binding protein; EF-hand, helix-lo	99.53
1dtl_A	161	Cardiac troponin C; helix-turn-helix, structural p	99.52
1g8i_A	190	Frequenin, neuronal calcium sensor 1; calcium bind	99.52
1juo_A	198	Sorcin; calcium-binding proteins, penta-EF-hand, P	99.51
3i5g_B	153	Myosin regulatory light chain LC-2, mantle muscle;	99.51
3khe_A	191	Calmodulin-like domain protein kinase isoform 3; c	99.51
2kyc_A	108	Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand p	99.51
3mse_B	180	Calcium-dependent protein kinase, putative; CDPKS,	99.51
3pm8_A	197	PFCDPK2, calcium-dependent protein kinase 2; malar	99.51
1w7j_B	151	Myosin light chain 1; motor protein, unconventiona	99.5
2mys_C	149	Myosin; muscle protein, motor protein; HET: MLY; 2	99.5
2f2o_A	179	Calmodulin fused with calmodulin-binding domain of	99.5
1wdc_C	156	Scallop myosin; calcium binding protein, muscle pr	99.49
3ox6_A	153	Calcium-binding protein 1; EF-hand, calcium-sensor	99.49
2r2i_A	198	Guanylyl cyclase-activating protein 1; EF hand, GC	99.49
1s6i_A	188	CDPK, calcium-dependent protein kinase SK5; EF-han	99.49
1top_A	162	Troponin C; contractIle system protein; 1.78A {Gal	99.49
3e3r_A	204	Calcyphosin, calcyphosine; human calcyphosine, EF-	99.48
1s1e_A	224	KV channel interacting protein 1; kchip, calcium-b	99.48
1jba_A	204	GCAP-2, protein (guanylate cyclase activating prot	99.48
2bl0_B	145	Myosin regulatory light chain; muscle protein, sli	99.48
3a4u_B	143	Multiple coagulation factor deficiency protein 2;	99.47
3sg6_A	450	Gcamp2, myosin light chain kinase, green fluoresce	99.47
1nya_A	176	Calerythrin; EF-hand, metal binding protein; NMR {	99.47
2ovk_C	159	Myosin catalytic light chain LC-1, mantle muscle,	99.46
1ggw_A	140	Protein (CDC4P); light chain, cytokinesis, cell cy	99.46
1uhk_A	191	Aequorin 2, aequorin; EF-hand motif, complex, lumi	99.46
2aao_A	166	CDPK, calcium-dependent protein kinase, isoform AK	99.45
3ll8_B	155	Calcineurin subunit B type 1; protein-peptide dock	99.44
2zfd_A	226	Calcineurin B-like protein 2; calcium binding prot	99.44
2bec_A	202	Calcineurin B homologous protein 2; calcineurin-ho	99.43
3k21_A	191	PFCDPK3, calcium-dependent protein kinase 3; calci	99.43
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	99.43
2sas_A	185	Sarcoplasmic calcium-binding protein; 2.40A {Branc	99.43
2zkm_X	799	1-phosphatidylinositol-4,5-bisphosphate phosphodie	99.42
1wdc_B	156	Scallop myosin; calcium binding protein, muscle pr	99.42
2ccm_A	191	Calexcitin; EF hand, calcium, signaling protein; 1	99.42
2ovk_B	153	RLC, myosin regulatory light chain LC-2, mantle mu	99.42
1qv0_A	195	Obelin, OBL; photoprotein, bioluminescence, atomic	99.42
2qac_A	146	Myosin A tail domain interacting protein MTIP; mal	99.41
2hpk_A	208	Photoprotein berovin; structural genomics, PSI, pr	99.41
2jul_A	256	Calsenilin; EF-hand, calcium, LXXLL, DNA binding p	99.41
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.41
3j04_B	143	Myosin regulatory light chain 2, smooth muscle MA	99.41
1qxp_A	900	MU-like calpain; M-calpain, MU-calpain, catalytic	99.4
3dd4_A	229	KV channel-interacting protein 4; EF-hands protein	99.39
2mys_B	166	Myosin; muscle protein, motor protein; HET: MLY; 2	99.39
3bow_A	714	Calpain-2 catalytic subunit; cysteine protease, in	99.39
3dtp_E	196	RLC, myosin regulatory light chain; muscle protein	99.39
3akb_A	166	Putative calcium binding protein; EF-hand, metal b	99.38
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.38
2lv7_A	100	Calcium-binding protein 7; metal binding protein;	99.36
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.36
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.34
3fs7_A	109	Parvalbumin, thymic; calcium-binding protein, EF-h	99.34
5pal_A	109	Parvalbumin; calcium-binding protein; 1.54A {Triak	99.34
2ct9_A	208	Calcium-binding protein P22; EF-hand, metal bindin	99.33
2lv7_A	100	Calcium-binding protein 7; metal binding protein;	99.33
1s6j_A	87	CDPK, calcium-dependent protein kinase SK5; EF-han	99.32
3h4s_E	135	KCBP interacting Ca2+-binding protein; kinesin, mo	99.32
1q80_A	174	SCP, sarcoplasmic calcium-binding protein; all-alp	99.31
1rwy_A	109	Parvalbumin alpha; EF-hand, calcium-binding, calci	99.3
2kld_A	123	Polycystin-2; PC2, PKD2, calcium binding domain, E	99.29
2pvb_A	108	Protein (parvalbumin); calcium binding protein, me	99.29
1bu3_A	109	Calcium-binding protein; 1.65A {Merluccius bilinea	99.29
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	99.29
1pva_A	110	Parvalbumin; calcium binding; 1.65A {Esox lucius}	99.26
1rro_A	108	RAT oncomodulin; calcium-binding protein; 1.30A {R	99.26
4drw_A	121	Protein S100-A10/annexin A2 chimeric protein; atyp	99.26
2hps_A	186	Coelenterazine-binding protein with bound coelent;	99.25
2jjz_A	150	Ionized calcium-binding adapter molecule 2; EF-han	99.25
1djx_A	624	PLC-D1, phosphoinositide-specific phospholipase C,	99.25
1dgu_A	183	Calcium-saturated CIB; helical, EF-hands, blood cl	99.25
1wy9_A	147	Allograft inflammatory factor 1; EF-hand, calucium	99.24
3a8r_A	179	Putative uncharacterized protein; EF-hand, membran	99.24
3cs1_A	219	Flagellar calcium-binding protein; myristoylated,	99.24
3a4u_B	143	Multiple coagulation factor deficiency protein 2;	99.22
2kn2_A	92	Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco	99.21
3nso_A	101	Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, meta	99.2
2l4h_A	214	Calcium and integrin-binding protein 1; metal bind	99.2
3ohm_B	885	1-phosphatidylinositol-4,5-bisphosphate phosphodi	99.19
2opo_A	86	Polcalcin CHE A 3; calcium-binding protein, dimer,	99.19
2opo_A	86	Polcalcin CHE A 3; calcium-binding protein, dimer,	99.18
2kz2_A	94	Calmodulin, CAM; TR2C, metal binding protein; NMR	99.18
1tiz_A	67	Calmodulin-related protein, putative; helix-turn-h	99.18
2lvv_A	226	Flagellar calcium-binding protein TB-24; EF-hand,	99.17
1k9u_A	78	Polcalcin PHL P 7; pollen allergen, calcium-bindin	99.17
2kn2_A	92	Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco	99.14
3n22_A	98	Protein S100-A2; EF-hand, calcium-binding, zinc-bi	99.14
2ktg_A	85	Calmodulin, putative; ehcam, Ca-binding protein, p	99.13
2b1u_A	71	Calmodulin-like protein 5; CLSP, calmodulin-like S	99.13
2joj_A	77	Centrin protein; N-terminal domain, centrin soluti	99.13
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	99.12
2jjz_A	150	Ionized calcium-binding adapter molecule 2; EF-han	99.12
2lnk_A	113	Protein S100-A4; EF-hand, calcium binding, all alp	99.12
3zwh_A	104	Protein S100-A4; Ca-binding protein-motor protein	99.1
3nso_A	101	Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, meta	99.1
2kyc_A	108	Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand p	99.1
2joj_A	77	Centrin protein; N-terminal domain, centrin soluti	99.1
4eto_A	93	Protein S100-A4; calcium-binding protein, EF-hand,	99.1
1avs_A	90	Troponin C; muscle contraction, calcium-activated,	99.1
2ktg_A	85	Calmodulin, putative; ehcam, Ca-binding protein, p	99.1
1avs_A	90	Troponin C; muscle contraction, calcium-activated,	99.07
1c7v_A	81	CAVP, calcium vector protein; EF-hand family, calc	99.07
1fi6_A	92	EH domain protein REPS1; EPS15 homology domain, EF	99.07
1fi6_A	92	EH domain protein REPS1; EPS15 homology domain, EF	99.06
1c07_A	95	Protein (epidermal growth factor receptor pathway	99.06
2y5i_A	99	S100Z, S100 calcium binding protein Z; metal-bindi	99.05
3nxa_A	100	Protein S100-A16; S100 family, calcium binding pro	99.05
1wlz_A	105	DJBP, CAP-binding protein complex interacting prot	99.05
3li6_A	66	Calcium-binding protein; calcium signaling protein	99.05
3n22_A	98	Protein S100-A2; EF-hand, calcium-binding, zinc-bi	99.05
2h2k_A	106	Protein S100-A13; calcium binding protein, metal b	99.05
3rm1_A	92	Protein S100-B; alpha-helical, EF hand, metal bind	99.04
1qjt_A	99	EH1, epidermal growth factor receptor substrate su	99.04
1c07_A	95	Protein (epidermal growth factor receptor pathway	99.04
1qx2_A	76	Vitamin D-dependent calcium-binding protein, INTE;	99.04
1j55_A	95	S-100P protein; metal binding protein; 2.00A {Homo	99.04
1j7q_A	86	CAVP, calcium vector protein; EF-hand family, calc	99.03
1tiz_A	67	Calmodulin-related protein, putative; helix-turn-h	99.03
1iq3_A	110	Ralbp1-interacting protein (partner of ralbp1); EF	99.02
3qr0_A	816	Phospholipase C-beta (PLC-beta); PH domain, EF han	99.02
1sjj_A	863	Actinin; 3-helix bundle, calponin homology domain,	99.01

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=100.00  E-value=2e-77  Score=622.27  Aligned_cols=444  Identities=30%  Similarity=0.535  Sum_probs=369.1

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      ..+.++|++.+.||+|+||+||+|+++.  +++.||||++.+.....                          .....+.
T Consensus        18 g~~~~~y~~~~~lG~G~~g~V~~~~~~~--~~~~vavK~~~~~~~~~--------------------------~~~~~~~   69 (486)
T 3mwu_A           18 GTFAERYNIVCMLGKGSFGEVLKCKDRI--TQQEYAVKVINKASAKN--------------------------KDTSTIL   69 (486)
T ss_dssp             CHHHHHEEEEEEEECCSSSEEEEEEETT--TCCEEEEEEEEHHHHBC--------------------------SCHHHHH
T ss_pred             CChhcceEEeEEEeecCCEEEEEEEECC--CCCEEEEEEEecccccc--------------------------hHHHHHH
Confidence            3578899999999999999999999987  78899999997532211                          1245688


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      +|+.+++++     +||||+++++++.+.+.+|+|||||.||+|.+.+...+.+++..++.++.||+.||.|||++||+|
T Consensus        70 ~E~~~l~~l-----~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH  144 (486)
T 3mwu_A           70 REVELLKKL-----DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVH  144 (486)
T ss_dssp             HHHHHHHHC-----CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             HHHHHHHhC-----CCCCcCeEEEEEEcCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence            999999999     999999999999999999999999999999999998899999999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCC
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFI  245 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~  245 (521)
                      |||||+|||+...+..+.+||+|||+|+...........+||+.|+|||++.+ .|+.++||||+||++|+|++|.+||.
T Consensus       145 ~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~  223 (486)
T 3mwu_A          145 RDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFY  223 (486)
T ss_dssp             SCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             ccCchHHEEEecCCCCCCEEEEECCcCeECCCCCccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCC
Confidence            99999999996555667899999999987665555566789999999999875 69999999999999999999999999


Q ss_pred             CCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCCCcc-----hhchHHHHHHH
Q 009980          246 AQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAKE-----EEMDAEIVSRL  320 (521)
Q Consensus       246 ~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~~~~-----~~~~~~~~~~~  320 (521)
                      +.+..+....+..+.+.++.+.|..+|+++++||.+||..||.+|||+.++|+||||+......     .......+.++
T Consensus       224 ~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~~~~~~~~~~~~~~~~~~~~~  303 (486)
T 3mwu_A          224 GKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSSETPTISDLPSLESAMTNI  303 (486)
T ss_dssp             CSSHHHHHHHHHHTCCCSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCHHHHHTCCCCCCGGGHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHhCCCCCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCHhhccCcccCccccccccHHHHHHHH
Confidence            9999999999999999888888999999999999999999999999999999999998654322     11224456678


Q ss_pred             HhHHHHhHHHHHHHHhhhhhHHHHhhHHHHHhhhccCCCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHH----hcCC
Q 009980          321 QSFNARRKLRAAAIASVLSSTIFLRRTKKLKNLLGSHDLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLK----AMNM  395 (521)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~l~~l~~~~~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~----~~~~  395 (521)
                      ++|...++++.+.+..+..                 ...+++++++++++|+.+|.|+|| |+.+||..++.    .+|.
T Consensus       304 ~~~~~~~~~~~~~l~~ia~-----------------~l~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~g~  366 (486)
T 3mwu_A          304 RQFQAEKKLAQAALLYMAS-----------------KLTTLDETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGV  366 (486)
T ss_dssp             HHHHHSCHHHHHHHHHHHH-----------------HHCCHHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHHHHH-----------------HhccHHHHHHHHHHHHHhCCCCCceeeHHHHHHHHHHhhhhhcc
Confidence            8888888888776654331                 114788999999999999999999 99999966555    4465


Q ss_pred             CCC----------cchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhC
Q 009980          396 SSL----------VPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRAL  465 (521)
Q Consensus       396 ~~~----------~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~  465 (521)
                      .++          .+++..+|+.+|.|+||.|+|+||+.++........++.++.+|+.||.|++|+|+.+||..++..+
T Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~  446 (486)
T 3mwu_A          367 DSNSLIQNEGSTIEDQIDSLMPLLDMDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGSGKISTKELFKLFSQA  446 (486)
T ss_dssp             CGGGHHHHTSSCHHHHHHHHHHHHCTTCCSSBCHHHHHHHHSCTTTTCCHHHHHHHHHHHCSSCSSSBCSSCC-------
T ss_pred             cchhcccccchhhHHHHHHHHHHhcCCCCCcCcHHHHHHHHHhhhccchHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHc
Confidence            554          6688999999999999999999999988776666778899999999999999999999999999887


Q ss_pred             CCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          466 PDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       466 ~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      +..      .++++++.+|+.+|.|+||.|+|+||.++|..
T Consensus       447 g~~------~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~  481 (486)
T 3mwu_A          447 DSS------IQMEELESIIEQVDNNKDGEVDFNEFVEMLQN  481 (486)
T ss_dssp             -------------------CCCCSSCSSSBCHHHHHHHHHH
T ss_pred             CCC------CCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence            654      56678999999999999999999999999875

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=100.00  E-value=7.4e-77  Score=620.49  Aligned_cols=455  Identities=32%  Similarity=0.514  Sum_probs=385.0

Q ss_pred             cccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHH
Q 009980            4 ETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDAL   83 (521)
Q Consensus         4 ~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (521)
                      ....+.++|++++.||+|+||+||+|+++.  +++.||||++.+.......               +.............
T Consensus        30 ~~~~i~~~Y~~~~~lG~G~~g~V~~~~~~~--~~~~~aiK~~~~~~~~~~~---------------~~~~~~~~~~~~~~   92 (504)
T 3q5i_A           30 KEGKIGESYFKVRKLGSGAYGEVLLCKEKN--GHSEKAIKVIKKSQFDKGR---------------YSDDNKNIEKFHEE   92 (504)
T ss_dssp             ECSCGGGTEEEEEEEEC--CEEEEEEEETT--TCCEEEEEEEEC-------------------------------CTHHH
T ss_pred             cCCCcccceEEEeEecccCCeEEEEEEECC--CCcEEEEEEEEhhhccccc---------------ccccchhhHHHHHH
Confidence            445688999999999999999999999988  7889999999865432100               00000111123456


Q ss_pred             HHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 009980           84 LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANI  163 (521)
Q Consensus        84 ~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i  163 (521)
                      +.+|+.+++++     +||||+++++++.++..+|+|||||.||+|.+++...+.+++..++.++.||+.||.|||++||
T Consensus        93 ~~~E~~~l~~l-----~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i  167 (504)
T 3q5i_A           93 IYNEISLLKSL-----DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNI  167 (504)
T ss_dssp             HHHHHHHHHTC-----CCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHHhC-----CCCCCCeEEEEEEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            88999999998     9999999999999999999999999999999999988999999999999999999999999999


Q ss_pred             eeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCC
Q 009980          164 VHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPP  243 (521)
Q Consensus       164 ~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~p  243 (521)
                      +||||||+|||+..++....+||+|||+|............+||+.|+|||++. +.|+.++||||+||++|+|++|.+|
T Consensus       168 vH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~p  246 (504)
T 3q5i_A          168 VHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPP  246 (504)
T ss_dssp             ECSCCSGGGEEESSTTCCSSEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             EeCCCcHHHEEEecCCCCccEEEEECCCCEEcCCCCccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCC
Confidence            999999999999544444579999999998776555566678999999999986 5699999999999999999999999


Q ss_pred             CCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCCCcch----hchHHHHHH
Q 009980          244 FIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAKEE----EMDAEIVSR  319 (521)
Q Consensus       244 f~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~~~~~----~~~~~~~~~  319 (521)
                      |.+.+..+....+..+.+.++.+.|..+|+++++||.+||..||.+|||+.++|+||||+.......    ......+.+
T Consensus       247 f~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~~~~~~~~~~~~~~~~~~  326 (504)
T 3q5i_A          247 FGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANNINKSDQKTLCGALSN  326 (504)
T ss_dssp             SCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHTCCCCCGGGHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhchhcccccchhhHHHHHHH
Confidence            9999999999999999999988899999999999999999999999999999999999986543321    122345666


Q ss_pred             HHhHHHHhHHHHHHHHhhhhhHHHHhhHHHHHhhhccCCCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhc-----
Q 009980          320 LQSFNARRKLRAAAIASVLSSTIFLRRTKKLKNLLGSHDLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAM-----  393 (521)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~l~~l~~~~~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~-----  393 (521)
                      +++|...++++.+++..+.                 ...++++++.+++++|+.+|.|++| |+.+||..+++.+     
T Consensus       327 ~~~~~~~~kl~~a~l~~i~-----------------~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~  389 (504)
T 3q5i_A          327 MRKFEGSQKLAQAAILFIG-----------------SKLTTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKN  389 (504)
T ss_dssp             HHHCCCCSHHHHHHHHHHH-----------------HHTSCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHhh-----------------ccCCcHHHHHHHHHHHHeeCCCCCCeEcHHHHHHHHHHhhhccc
Confidence            7777777777766554322                 2235889999999999999999999 9999999999987     


Q ss_pred             ---CCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCC
Q 009980          394 ---NMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCL  470 (521)
Q Consensus       394 ---~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~  470 (521)
                         +...+.+++..+|+.+|.|+||.|+|+||+.++........++.++.+|+.||.|++|+|+.+||..++...     
T Consensus       390 ~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~-----  464 (504)
T 3q5i_A          390 ELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCMDKQILFSEERLRRAFNLFDTDKSGKITKEELANLFGLT-----  464 (504)
T ss_dssp             -CCSCCCHHHHHHHHHHHHCTTCSSSEEHHHHHHHHSCHHHHTCHHHHHHHHHHHCTTCCSEECHHHHHHHTTCS-----
T ss_pred             ccccccccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhhhcccCHHHHHHHHHHhcCCCCCcCcHHHHHHHHhhC-----
Confidence               456667899999999999999999999999998776555667899999999999999999999999988652     


Q ss_pred             CCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          471 PVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       471 ~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                         ..++++++.+|+.+|.|+||.|+|+||+.+|..
T Consensus       465 ---~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~  497 (504)
T 3q5i_A          465 ---SISEKTWNDVLGEADQNKDNMIDFDEFVSMMHK  497 (504)
T ss_dssp             ---CCCHHHHHHHHHTTCSSCSSSEEHHHHHHHHHH
T ss_pred             ---CCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence               156789999999999999999999999999986

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=100.00  E-value=2.7e-77  Score=621.37  Aligned_cols=446  Identities=30%  Similarity=0.532  Sum_probs=385.9

Q ss_pred             ccccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHH
Q 009980            3 QETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDA   82 (521)
Q Consensus         3 ~~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (521)
                      ..+..+.++|++.+.||+|+||.||+|+++.  +++.||||++.+.....                         .....
T Consensus        19 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~--~~~~~avK~~~~~~~~~-------------------------~~~~~   71 (484)
T 3nyv_A           19 HSTAIFSDRYKGQRVLGKGSFGEVILCKDKI--TGQECAVKVISKRQVKQ-------------------------KTDKE   71 (484)
T ss_dssp             CCCCCHHHHEEEEEEEEEETTEEEEEEEETT--TCCEEEEEEEETTTCCB-------------------------SSCHH
T ss_pred             cCCCcccCceEEeeEEecCCCEEEEEEEECC--CCCEEEEEEEEhhhccc-------------------------chHHH
Confidence            3456788999999999999999999999988  78899999997643321                         12345


Q ss_pred             HHHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 009980           83 LLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQAN  162 (521)
Q Consensus        83 ~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~  162 (521)
                      .+.+|+.+++++     +||||+++++++.+.+.+|+|||||.||+|.+++...+.+++..++.++.||+.||.|||++|
T Consensus        72 ~~~~E~~~l~~l-----~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  146 (484)
T 3nyv_A           72 SLLREVQLLKQL-----DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK  146 (484)
T ss_dssp             HHHHHHHHHTTC-----CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHhC-----CCCCCCcEEEEEEeCCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            688999999998     999999999999999999999999999999999999899999999999999999999999999


Q ss_pred             CeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCC
Q 009980          163 IVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYP  242 (521)
Q Consensus       163 i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~  242 (521)
                      |+||||||+|||+...+.++.+||+|||+|+...........+||+.|+|||++.+ .|+.++||||+||++|+|++|.+
T Consensus       147 ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~  225 (484)
T 3nyv_A          147 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCP  225 (484)
T ss_dssp             CCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCCSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             eeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcccccccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCC
Confidence            99999999999996555678899999999987665555666789999999999865 79999999999999999999999


Q ss_pred             CCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCCCc----chhchHHHHH
Q 009980          243 PFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAK----EEEMDAEIVS  318 (521)
Q Consensus       243 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~~~----~~~~~~~~~~  318 (521)
                      ||.+.+..+....+..+.+.++.+.|..+|+++++||.+||..||.+|||+.++|+||||+.....    ........+.
T Consensus       226 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~~~~~~~~~~~~~~~~~~~~~~  305 (484)
T 3nyv_A          226 PFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAIL  305 (484)
T ss_dssp             SSCCSSHHHHHHHHHHCCCCCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHHHTC-----CCCBCHHHHH
T ss_pred             CCCCCCHHHHHHHHHcCCCCCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhChhhcccccccccccccchHHHHH
Confidence            999999999999999999988888899999999999999999999999999999999999754321    1223355677


Q ss_pred             HHHhHHHHhHHHHHHHHhhhhhHHHHhhHHHHHhhhccCCCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHH----HHhc
Q 009980          319 RLQSFNARRKLRAAAIASVLSSTIFLRRTKKLKNLLGSHDLNEEEIQNLRIHFRTICANGDN-ATLSEFEEV----LKAM  393 (521)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~l~~l~~~~~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~----l~~~  393 (521)
                      ++++|...++++.+++..+..                 ...+++++.+++++|..+|.|++| |+.+||..+    ++.+
T Consensus       306 ~~~~~~~~~kl~qa~l~~i~~-----------------~~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~  368 (484)
T 3nyv_A          306 NIRQFQGTQKLAQAALLYMGS-----------------KLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMK  368 (484)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHC--
T ss_pred             HHHHHhhhhHHHHHHHHHHHh-----------------ccCcHHHHHHHHHHHHHhCcCCCceEeHHHHHHHHHHHhhhc
Confidence            788888888888776653321                 113678889999999999999999 999999544    4455


Q ss_pred             CCCCC-------cchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCC
Q 009980          394 NMSSL-------VPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALP  466 (521)
Q Consensus       394 ~~~~~-------~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~  466 (521)
                      |..++       .+++.++|+.+|.|++|.|+|+||+.++........+++++.+|+.||+|++|+|+.+||..++... 
T Consensus       369 g~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~-  447 (484)
T 3nyv_A          369 GQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGVS-  447 (484)
T ss_dssp             --CGGGCSHHHHHHHHHHHHHHHTCCTTSEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHT-
T ss_pred             ccccccccccccHHHHHHHHHHhCCCCCCeEeHHHHHHHHHhccccCcHHHHHHHHHHHCCCCCCcCCHHHHHHHHHhc-
Confidence            76666       6788999999999999999999999998876555667889999999999999999999999999862 


Q ss_pred             CCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          467 DDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       467 ~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                             ..++++++.+|+.+|.|+||.|+|+||+++|..
T Consensus       448 -------~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~~~  480 (484)
T 3nyv_A          448 -------DVDSETWKSVLSEVDKNNDGEVDFDEFQQMLLK  480 (484)
T ss_dssp             -------TCCHHHHHHHHHHHCTTCCSEEEHHHHHHHHHH
T ss_pred             -------CCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHh
Confidence                   156789999999999999999999999999876

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=100.00  E-value=1.6e-77  Score=624.06  Aligned_cols=444  Identities=35%  Similarity=0.575  Sum_probs=380.4

Q ss_pred             cccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHH
Q 009980            4 ETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDAL   83 (521)
Q Consensus         4 ~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (521)
                      ....+.++|++++.||+|+||+||+|+++.  ++..||||++.+.....                          .....
T Consensus        31 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~--~~~~~aiK~~~~~~~~~--------------------------~~~~~   82 (494)
T 3lij_A           31 KKGHLSEMYQRVKKLGSGAYGEVLLCRDKV--THVERAIKIIRKTSVST--------------------------SSNSK   82 (494)
T ss_dssp             CBCCHHHHEEEEEEEECC---EEEEEEETT--TCCEEEEEEEEC-------------------------------CTTHH
T ss_pred             CCCchhcCeEEeeEEecCCCEEEEEEEECC--CCcEEEEEEEeccccCc--------------------------hHHHH
Confidence            445677899999999999999999999988  78899999997643221                          12345


Q ss_pred             HHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 009980           84 LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANI  163 (521)
Q Consensus        84 ~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i  163 (521)
                      +.+|+.+++.+     +||||+++++++.+.+.+|+|||||.||+|.+.+.....+++..++.++.||+.||.|||++||
T Consensus        83 ~~~E~~~l~~l-----~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i  157 (494)
T 3lij_A           83 LLEEVAVLKLL-----DHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNI  157 (494)
T ss_dssp             HHHHHHHHTTC-----CCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHHhC-----CCCCCCeEEEEEEeCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            78999999988     9999999999999999999999999999999999988999999999999999999999999999


Q ss_pred             eeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCC
Q 009980          164 VHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPP  243 (521)
Q Consensus       164 ~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~p  243 (521)
                      +||||||+|||+...+..+.+||+|||+|............+||+.|+|||++. ..|+.++||||+||++|+|++|.+|
T Consensus       158 vH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~p  236 (494)
T 3lij_A          158 VHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPP  236 (494)
T ss_dssp             ECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTBCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             eeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCC
Confidence            999999999999554556779999999998766555556678999999999986 5799999999999999999999999


Q ss_pred             CCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCCCc-----chhchHHHHH
Q 009980          244 FIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAK-----EEEMDAEIVS  318 (521)
Q Consensus       244 f~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~~~-----~~~~~~~~~~  318 (521)
                      |.+.+..+....+..+.+.++.+.|..+|+.+++||.+||..||.+|||+.++|+||||+.....     ........+.
T Consensus       237 f~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~~~~~~~~~~~~~~~~~~~  316 (494)
T 3lij_A          237 FGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMCSKKESGIELPSLANAIE  316 (494)
T ss_dssp             SCCSSHHHHHHHHHHTCCCCCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHHHHHHHC---CCCCSSHHH
T ss_pred             CCCCCHHHHHHHHHhCCCCCCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhcCcccccCcccccccccccccHHHHH
Confidence            99999999999999999999888999999999999999999999999999999999999753211     1112234566


Q ss_pred             HHHhHHHHhHHHHHHHHhhhhhHHHHhhHHHHHhhhccCCCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCC--
Q 009980          319 RLQSFNARRKLRAAAIASVLSSTIFLRRTKKLKNLLGSHDLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNM--  395 (521)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~l~~l~~~~~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~--  395 (521)
                      +++++...++++.+++..+.                 ....+++++.+++++|+.+|.|++| |+.+||..+++.++.  
T Consensus       317 ~~~~~~~~~~l~qa~l~~ia-----------------~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~  379 (494)
T 3lij_A          317 NMRKFQNSQKLAQAALLYMA-----------------SKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEE  379 (494)
T ss_dssp             HHHTTTTCCHHHHHHHHHHH-----------------HHSCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHTTHHHHSSC
T ss_pred             HHHHHHHhHHHHHHHHHHHH-----------------HhcccHHHHHHHHHHHHHhCcCCCCeEcHHHHHHHHHHhcccc
Confidence            77777777777766554322                 1225889999999999999999999 999999999998864  


Q ss_pred             ------CCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCC
Q 009980          396 ------SSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDC  469 (521)
Q Consensus       396 ------~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~  469 (521)
                            ..+..++.++|+.+|.|++|.|+|+||+.++........+++++.+|+.||+|++|+|+.+||..++..  .  
T Consensus       380 ~~~~~~~~~~~~~~~~~~~~D~d~~G~I~~~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~--~--  455 (494)
T 3lij_A          380 VAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVFGL--D--  455 (494)
T ss_dssp             CCCC--CHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHSCHHHHTCHHHHHHHHHHHCTTCSSEECHHHHHHHC-C--C--
T ss_pred             cccccccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhhhccccHHHHHHHHHHHCCCCCCcCCHHHHHHHHHh--c--
Confidence                  334578899999999999999999999999877655567788999999999999999999999998864  1  


Q ss_pred             CCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          470 LPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       470 ~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                          ..++++++.+|+.+|.|+||.|+|+||+++|+.
T Consensus       456 ----~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~  488 (494)
T 3lij_A          456 ----HLESKTWKEMISGIDSNNDGDVDFEEFCKMIQK  488 (494)
T ss_dssp             ----SCCCHHHHHHHHTTCSSSSSSEEHHHHHHHHHH
T ss_pred             ----CCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence                256679999999999999999999999999986

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=1.5e-65  Score=492.51  Aligned_cols=262  Identities=31%  Similarity=0.491  Sum_probs=235.7

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      .-.++|++++.||+|+||+||+|+++.  +++.||||++.+.....                         ......+.+
T Consensus        29 ~~~~dy~i~~~lG~G~fg~V~~a~~~~--~~~~~AiK~i~k~~~~~-------------------------~~~~~~~~~   81 (311)
T 4aw0_A           29 KRPEDFKFGKILGEGSFSTVVLARELA--TSREYAIKILEKRHIIK-------------------------ENKVPYVTR   81 (311)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEETT--TCCEEEEEEEEHHHHHH-------------------------TTCHHHHHH
T ss_pred             CCccccEEEEEEecccCeEEEEEEECC--CCCEEEEEEEEHHHCCC-------------------------HHHHHHHHH
Confidence            345789999999999999999999998  88999999997643211                         112356889


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHR  166 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~  166 (521)
                      |+.+|+++     +|||||+++++|++++.+|||||||+||+|.+++.+.+.++|.+++.++.||+.||.|||++||+||
T Consensus        82 E~~il~~l-----~HpnIv~l~~~~~~~~~~yivmEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHR  156 (311)
T 4aw0_A           82 ERDVMSRL-----DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR  156 (311)
T ss_dssp             HHHHHTTC-----CCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred             HHHHHHhC-----CCCCCCeEEEEEEeCCEEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCccC
Confidence            99999998     9999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCcEEEeeCCCCCCEEEeecCCCccCCCC---CCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCC
Q 009980          167 DLKPENCLFLNDREDSPLKIMDFGLSSVEGYT---DPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPP  243 (521)
Q Consensus       167 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~p  243 (521)
                      ||||+|||+   +.++.+||+|||+|+.....   ....+.+|||.|||||++.+..|+.++|||||||++|+|++|++|
T Consensus       157 DlKPeNILl---~~~g~vKl~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~P  233 (311)
T 4aw0_A          157 DLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP  233 (311)
T ss_dssp             CCSGGGEEE---CTTSCEEECCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCS
T ss_pred             CCCHHHeEE---cCCCCEEEEEcCCceecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence            999999999   78899999999999875432   234567899999999999999999999999999999999999999


Q ss_pred             CCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHH------HHcCCcccCCCC
Q 009980          244 FIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQE------LLNHPWVIGDSA  307 (521)
Q Consensus       244 f~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~------~l~h~~~~~~~~  307 (521)
                      |.+.+..++..+|..+.+.++    ..+|+++++||.+||.+||.+|||++|      +++||||++-..
T Consensus       234 F~~~~~~~~~~~i~~~~~~~p----~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~idw  299 (311)
T 4aw0_A          234 FRAGNEGLIFAKIIKLEYDFP----EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTW  299 (311)
T ss_dssp             SCCSSHHHHHHHHHHTCCCCC----TTCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCC
T ss_pred             CCCCCHHHHHHHHHcCCCCCC----cccCHHHHHHHHHHccCCHhHCcChHHHcCCHHHHCCCCcCCCCH
Confidence            999999999999999988776    468999999999999999999999987      589999987543

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=7.7e-65  Score=481.25  Aligned_cols=256  Identities=33%  Similarity=0.531  Sum_probs=217.1

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ++|++.+.||+|+||+||+|+++.  +++.||||++++......                         .....+.+|+.
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~--~~~~vAiK~i~~~~~~~~-------------------------~~~~~~~~Ei~   65 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTT--TGQKVALKIINKKVLAKS-------------------------DMQGRIEREIS   65 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTT--TCCEEEEEEEECC-------------------------------CHHHHHHHHH
T ss_pred             eCeEEEEEEecCcCeEEEEEEECC--CCCEEEEEEEeHHHcCCH-------------------------HHHHHHHHHHH
Confidence            689999999999999999999988  889999999986543221                         22456889999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCC
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLK  169 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlk  169 (521)
                      +++++     +|||||++++++++++.+||||||| +|+|.+++.+.+++++.+++.++.||+.||.|||++||+|||||
T Consensus        66 il~~l-----~HpnIv~~~~~~~~~~~~~ivmEy~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiK  139 (275)
T 3hyh_A           66 YLRLL-----RHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLK  139 (275)
T ss_dssp             HHHHC-----CCTTBCCEEEEEECSSEEEEEEECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred             HHHHC-----CCCCCCeEEEEEEECCEEEEEEeCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCC
Confidence            99999     9999999999999999999999999 67999999999999999999999999999999999999999999


Q ss_pred             CCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCC-CchhhhHHHHHHHHHHHhCCCCCCCCC
Q 009980          170 PENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRI-TSKSDMWSLGVILYILLSGYPPFIAQS  248 (521)
Q Consensus       170 p~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~~ll~g~~pf~~~~  248 (521)
                      |+|||+   +.++.+||+|||+|+.........+.+||+.|||||++.+..| +.++||||+||++|+|++|++||.+.+
T Consensus       140 P~NILl---~~~~~vkl~DFGla~~~~~~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~  216 (275)
T 3hyh_A          140 PENLLL---DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES  216 (275)
T ss_dssp             TTTEEE---CTTCCEEECCSSCC---------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             hHHeEE---CCCCCEEEeecCCCeecCCCCccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCC
Confidence            999999   7788999999999987665555667789999999999998876 589999999999999999999999999


Q ss_pred             cHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCC
Q 009980          249 NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGD  305 (521)
Q Consensus       249 ~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~  305 (521)
                      ..+..+.+..+.+.++    ..+|+++++||.+||++||++|||++|+|+||||+.+
T Consensus       217 ~~~~~~~i~~~~~~~p----~~~s~~~~~li~~~L~~dP~~R~s~~eil~hpw~k~~  269 (275)
T 3hyh_A          217 IPVLFKNISNGVYTLP----KFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVD  269 (275)
T ss_dssp             HHHHHHHHHHTCCCCC----TTSCHHHHHHHHHHSCSSGGGSCCHHHHHHCHHHHTT
T ss_pred             HHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHccCChhHCcCHHHHHcCcccccC
Confidence            9999999998887765    4689999999999999999999999999999999754

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=7.8e-64  Score=487.89  Aligned_cols=260  Identities=26%  Similarity=0.448  Sum_probs=232.0

Q ss_pred             cccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      ..+.|++.+.||+|+||+||+|+++.  +++.||||++.+....                            ....+.+|
T Consensus        72 p~~~y~~~~~iG~G~fG~V~~a~~~~--tg~~vAiK~i~~~~~~----------------------------~~~~~~~E  121 (346)
T 4fih_A           72 PRSYLDNFIKIGEGSTGIVCIATVRS--SGKLVAVKKMDLRKQQ----------------------------RRELLFNE  121 (346)
T ss_dssp             GGGTEEEEEEEEECSSCEEEEEEETT--TCCEEEEEEEEGGGCS----------------------------SGGGGHHH
T ss_pred             hhHhcEEeEEeecCcCeEEEEEEECC--CCCEEEEEEEecCchh----------------------------HHHHHHHH
Confidence            45679999999999999999999998  8899999999754321                            12347899


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecc
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRD  167 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~d  167 (521)
                      +.+|+++     +|||||+++++|++++.+|||||||+||+|.+++.+ +++++.+++.++.||+.||.|||++||+|||
T Consensus       122 i~il~~l-----~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~-~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRD  195 (346)
T 4fih_A          122 VVIMRDY-----QHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVIHRD  195 (346)
T ss_dssp             HHHHHHC-----CCTTBCCEEEEEEETTEEEEEECCCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             HHHHHhC-----CCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccc
Confidence            9999999     999999999999999999999999999999998876 5799999999999999999999999999999


Q ss_pred             CCCCcEEEeeCCCCCCEEEeecCCCccCCCC-CCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCC
Q 009980          168 LKPENCLFLNDREDSPLKIMDFGLSSVEGYT-DPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIA  246 (521)
Q Consensus       168 lkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~  246 (521)
                      |||+|||+   +.++.+||+|||+|+..... ....+.+||+.|||||++.+.+|+.++|||||||++|+|++|++||.+
T Consensus       196 lKp~NILl---~~~g~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~  272 (346)
T 4fih_A          196 IKSDSILL---THDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN  272 (346)
T ss_dssp             CSGGGEEE---CTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             CCHHHEEE---CCCCCEEEecCcCceecCCCCCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence            99999999   77889999999999876433 344567899999999999999999999999999999999999999999


Q ss_pred             CCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCCC
Q 009980          247 QSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSA  307 (521)
Q Consensus       247 ~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~~  307 (521)
                      .+..+....+..+.. +....|..+|+++++||.+||.+||.+|||++|+|+||||+....
T Consensus       273 ~~~~~~~~~i~~~~~-~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~~~~  332 (346)
T 4fih_A          273 EPPLKAMKMIRDNLP-PRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP  332 (346)
T ss_dssp             SCHHHHHHHHHHSSC-CCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred             cCHHHHHHHHHcCCC-CCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhcCCCC
Confidence            998888888876543 233456789999999999999999999999999999999986543

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=3.6e-64  Score=490.98  Aligned_cols=257  Identities=26%  Similarity=0.445  Sum_probs=224.9

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ++|++++.||+|+||+||+|+++.  +++.||||++.+.....                          .....+.+|+.
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~~~~--~~~~vAiK~i~~~~~~~--------------------------~~~~~~~~E~~   75 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVKSTE--DGRQYVIKEINISRMSS--------------------------KEREESRREVA   75 (350)
T ss_dssp             CCEEEEEEC------CEEEEEETT--TCCEEEEEEEECTTSCH--------------------------HHHHHHHHHHH
T ss_pred             cceEEeEEEecCCCeEEEEEEECC--CCCEEEEEEEehHHCCH--------------------------HHHHHHHHHHH
Confidence            689999999999999999999998  88999999997643211                          22456889999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecc
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ--ERYMEVGAAAVIRQIAEGLAALHQANIVHRD  167 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~al~~lH~~~i~H~d  167 (521)
                      ++++|     +|||||+++++|++++.+|||||||+||+|.+++...  ..+++.+++.|+.||+.||.|||++||+|||
T Consensus        76 il~~l-----~HpnIV~~~~~~~~~~~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRD  150 (350)
T 4b9d_A           76 VLANM-----KHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRD  150 (350)
T ss_dssp             HHHHC-----CCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETT
T ss_pred             HHHHC-----CCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecc
Confidence            99999     9999999999999999999999999999999999754  3579999999999999999999999999999


Q ss_pred             CCCCcEEEeeCCCCCCEEEeecCCCccCCCCC-CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCC
Q 009980          168 LKPENCLFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIA  246 (521)
Q Consensus       168 lkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~  246 (521)
                      |||+|||+   +.++.+||+|||+|+...... .....+||+.|||||++.+..|+.++|||||||++|+|++|++||.+
T Consensus       151 lKp~NILl---~~~g~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~  227 (350)
T 4b9d_A          151 IKSQNIFL---TKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEA  227 (350)
T ss_dssp             CCGGGEEE---CTTCCEEECSTTEESCCCHHHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             CCHHHEEE---CCCCCEEEcccccceeecCCcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence            99999999   778899999999998765332 23456899999999999999999999999999999999999999999


Q ss_pred             CCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCC
Q 009980          247 QSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGD  305 (521)
Q Consensus       247 ~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~  305 (521)
                      .+..+....+..+.++..   +..+|+++++||.+||++||.+|||++|+|+||||+..
T Consensus       228 ~~~~~~~~~i~~~~~~~~---~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~  283 (350)
T 4b9d_A          228 GSMKNLVLKIISGSFPPV---SLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKR  283 (350)
T ss_dssp             SSHHHHHHHHHHTCCCCC---CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHTT
T ss_pred             cCHHHHHHHHHcCCCCCC---CccCCHHHHHHHHHHccCChhHCcCHHHHhcCHHhhcC
Confidence            999999999998876533   35789999999999999999999999999999999754

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=9e-64  Score=480.37  Aligned_cols=258  Identities=26%  Similarity=0.470  Sum_probs=224.3

Q ss_pred             cceeecccccccCceEEEEeEEccC-CCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTC-GETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEI   88 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   88 (521)
                      ++|++++.||+|+||+||+|++... .+++.||||++++.....                          .....+.+|+
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~--------------------------~~~~~~~~E~   77 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKV--------------------------RDRVRTKMER   77 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEE--------------------------EECC------
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcCh--------------------------HHHHHHHHHH
Confidence            6899999999999999999998542 267899999997643211                          1112367899


Q ss_pred             HHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 009980           89 LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDL  168 (521)
Q Consensus        89 ~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dl  168 (521)
                      .+++++     +|||||+++++|++++.+|||||||+||+|.+++.+.+.+++.+++.++.||+.||.|||++||+||||
T Consensus        78 ~il~~l-----~HpnIv~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDl  152 (304)
T 3ubd_A           78 DILVEV-----NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDL  152 (304)
T ss_dssp             CCCCCC-----CCTTEECEEEEEEETTEEEEEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSC
T ss_pred             HHHHHC-----CCCCCCeEEEEEEECCEEEEEEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCC
Confidence            988888     999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCccCCC-CCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSSVEGY-TDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQ  247 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~  247 (521)
                      ||+|||+   +.++.+||+|||+|+.... .....+.+||+.|||||++.+..|+.++||||+||++|+|+||++||.+.
T Consensus       153 Kp~NILl---~~~g~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~  229 (304)
T 3ubd_A          153 KPENILL---DEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGK  229 (304)
T ss_dssp             CGGGEEE---CTTSCEEEESSEEEEC-----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             CHHHeEE---cCCCCEEecccccceeccCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCc
Confidence            9999999   7888999999999986433 33445678999999999999999999999999999999999999999999


Q ss_pred             CcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCC-----HHHHHcCCcccCC
Q 009980          248 SNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPS-----AQELLNHPWVIGD  305 (521)
Q Consensus       248 ~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t-----~~~~l~h~~~~~~  305 (521)
                      +..+....+.++.+.++    ..+|+++++||.+||++||++|||     ++|+++||||++-
T Consensus       230 ~~~~~~~~i~~~~~~~p----~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~i  288 (304)
T 3ubd_A          230 DRKETMTMILKAKLGMP----QFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTI  288 (304)
T ss_dssp             SHHHHHHHHHHCCCCCC----TTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTC
T ss_pred             CHHHHHHHHHcCCCCCC----CcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCccccCC
Confidence            99999999999887665    468999999999999999999998     5899999999864

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=2.5e-62  Score=488.93  Aligned_cols=261  Identities=26%  Similarity=0.447  Sum_probs=232.3

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      ...+.|++.+.||+|+||+||+|+++.  +++.||||++.+....                            ....+.+
T Consensus       148 dp~~~y~~~~~iG~G~fG~V~~a~~~~--tg~~vAiK~i~~~~~~----------------------------~~~~~~~  197 (423)
T 4fie_A          148 DPRSYLDNFIKIGEGSTGIVCIATVRS--SGKLVAVKKMDLRKQQ----------------------------RRELLFN  197 (423)
T ss_dssp             CGGGTEEEEEEEEECSSCEEEEEEETT--TCCEEEEEEEESTTCS----------------------------SGGGHHH
T ss_pred             ChhHhcEeeeEeccCcCcEEEEEEECC--CCCEEEEEEEeccchh----------------------------HHHHHHH
Confidence            345789999999999999999999998  8899999999754321                            1345889


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHR  166 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~  166 (521)
                      |+.+|+++     +|||||+++++|.+++.+|||||||+||+|.+++.. +.+++.+++.|+.||+.||.|||++||+||
T Consensus       198 Ei~il~~l-----~HpnIV~l~~~~~~~~~~~iVmEy~~gG~L~~~i~~-~~l~e~~~~~~~~qil~aL~ylH~~~IiHR  271 (423)
T 4fie_A          198 EVVIMRDY-----QHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVIHR  271 (423)
T ss_dssp             HHHHHHHC-----CCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred             HHHHHHhC-----CCCCCCceEEEEEECCEEEEEEeCCCCCcHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHCCeecc
Confidence            99999999     999999999999999999999999999999998865 579999999999999999999999999999


Q ss_pred             cCCCCcEEEeeCCCCCCEEEeecCCCccCCCC-CCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCC
Q 009980          167 DLKPENCLFLNDREDSPLKIMDFGLSSVEGYT-DPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFI  245 (521)
Q Consensus       167 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~  245 (521)
                      ||||+|||+   +.++.+||+|||+|+..... ....+.+||+.|||||++.+..|+.++|||||||++|+|++|++||.
T Consensus       272 DiKp~NILl---~~~g~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~  348 (423)
T 4fie_A          272 DIKSDSILL---THDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYF  348 (423)
T ss_dssp             CCSTTTEEE---CTTCCEEECCCTTCEECCSSCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred             cCCHHHEEE---cCCCCEEEecCccceECCCCCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCC
Confidence            999999999   77889999999999875433 34456789999999999999999999999999999999999999999


Q ss_pred             CCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCCC
Q 009980          246 AQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSA  307 (521)
Q Consensus       246 ~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~~  307 (521)
                      +.+..+....+..+.. .....+..+|+++++||.+||.+||.+|||+.|+|+||||+....
T Consensus       349 ~~~~~~~~~~i~~~~~-~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~~~~  409 (423)
T 4fie_A          349 NEPPLKAMKMIRDNLP-PRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP  409 (423)
T ss_dssp             TSCHHHHHHHHHHSCC-CCCSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred             CcCHHHHHHHHHcCCC-CCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHHhcCCCC
Confidence            9998888888876643 233445789999999999999999999999999999999986543

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=7.5e-62  Score=464.86  Aligned_cols=256  Identities=23%  Similarity=0.371  Sum_probs=218.1

Q ss_pred             cce-eecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHH
Q 009980           10 DEY-EVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEI   88 (521)
Q Consensus        10 ~~Y-~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   88 (521)
                      ++| ++.+.||+|+||+||+|+++.  ++..||||++.+....                          ......+.+|+
T Consensus        25 gr~~~~~~~iG~G~fg~Vy~a~~~~--~~~~vAiK~i~~~~~~--------------------------~~~~~~~~~E~   76 (290)
T 3fpq_A           25 GRFLKFDIEIGRGSFKTVYKGLDTE--TTVEVAWCELQDRKLT--------------------------KSERQRFKEEA   76 (290)
T ss_dssp             SSEEEEEEEEEECSSEEEEEEEETT--TCCEEEEEEEEGGGSC--------------------------HHHHHHHHHHH
T ss_pred             CceEEeeeEEecCcCcEEEEEEECC--CCeEEEEEEEchhhCC--------------------------HHHHHHHHHHH
Confidence            455 788899999999999999998  8899999999754321                          12245688999


Q ss_pred             HHHHHHhhccCCCCCccceeEEEEe----CCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--
Q 009980           89 LVMRKIVENVSPHPNVIDLYDVYED----QNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQAN--  162 (521)
Q Consensus        89 ~~l~~l~~~~~~hpniv~~~~~~~~----~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~--  162 (521)
                      .+++++     +|||||+++++|++    ++.+|||||||+||+|.+++.+.+.+++..++.|+.||+.||.|||++|  
T Consensus        77 ~il~~l-----~HpnIV~~~~~~~~~~~~~~~~~lvmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~  151 (290)
T 3fpq_A           77 EMLKGL-----QHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPP  151 (290)
T ss_dssp             HHHHTC-----CCTTBCCEEEEEEEEETTEEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSC
T ss_pred             HHHHhC-----CCCCCCcEEEEEeeccCCCcEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCC
Confidence            999999     99999999999976    3568999999999999999999999999999999999999999999999  


Q ss_pred             CeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCC
Q 009980          163 IVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYP  242 (521)
Q Consensus       163 i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~  242 (521)
                      |+||||||+|||+.  +.++.+||+|||+|+.... ....+.+|||.|||||++.+ +|+.++|||||||++|+|+||++
T Consensus       152 IiHRDlKp~NILl~--~~~g~vKl~DFGla~~~~~-~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~  227 (290)
T 3fpq_A          152 IIHRDLKCDNIFIT--GPTGSVKIGDLGLATLKRA-SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEY  227 (290)
T ss_dssp             CCCCCCCGGGEEES--STTSCEEECCTTGGGGCCT-TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             EEecccChhheeEE--CCCCCEEEEeCcCCEeCCC-CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCC
Confidence            99999999999992  2467899999999986443 34456789999999999864 69999999999999999999999


Q ss_pred             CCCCCCcH-HHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccC
Q 009980          243 PFIAQSNR-QKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIG  304 (521)
Q Consensus       243 pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~  304 (521)
                      ||.+.+.. .+...+..+..  +...+..+|+++++||.+||..||++|||++++|+||||+.
T Consensus       228 Pf~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~Hp~~~~  288 (290)
T 3fpq_A          228 PYSECQNAAQIYRRVTSGVK--PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             TTTTCSSHHHHHHHHTTTCC--CGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred             CCCCCCcHHHHHHHHHcCCC--CCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccC
Confidence            99876554 44455544433  23344668999999999999999999999999999999975

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=7.6e-62  Score=472.55  Aligned_cols=254  Identities=25%  Similarity=0.307  Sum_probs=223.3

Q ss_pred             ccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEI   88 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   88 (521)
                      .+.|++.+.||+|+||+||+|+++.  +++.||||++++...                                 ..+|+
T Consensus        57 ~~~~~~~~~lG~G~fG~Vy~a~~~~--~g~~vAiK~i~~~~~---------------------------------~~~E~  101 (336)
T 4g3f_A           57 VHWMTHQPRVGRGSFGEVHRMKDKQ--TGFQCAVKKVRLEVF---------------------------------RVEEL  101 (336)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETT--TCCEEEEEEEETTTC---------------------------------CTHHH
T ss_pred             hhheEeCcEeccCCCeEEEEEEECC--CCCEEEEEEECHHHh---------------------------------HHHHH
Confidence            3578999999999999999999998  889999999975321                                 23689


Q ss_pred             HHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 009980           89 LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDL  168 (521)
Q Consensus        89 ~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dl  168 (521)
                      .+++++     +|||||+++++|++++.+|||||||+||+|.+++...+.+++.+++.++.||+.||.|||++||+||||
T Consensus       102 ~il~~l-----~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDl  176 (336)
T 4g3f_A          102 VACAGL-----SSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDV  176 (336)
T ss_dssp             HTTTTC-----CCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCC
T ss_pred             HHHHhC-----CCCCCCcEEEEEEECCEEEEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccc
Confidence            999888     999999999999999999999999999999999999899999999999999999999999999999999


Q ss_pred             CCCcEEEeeCCCCC-CEEEeecCCCccCCCCC------CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCC
Q 009980          169 KPENCLFLNDREDS-PLKIMDFGLSSVEGYTD------PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGY  241 (521)
Q Consensus       169 kp~Nil~~~~~~~~-~~kl~Dfg~a~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~  241 (521)
                      ||+|||+   +.++ .+||+|||+|+......      .....+|||.|||||++.+.+|+.++|||||||++|+|++|+
T Consensus       177 Kp~NILl---~~~g~~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~  253 (336)
T 4g3f_A          177 KADNVLL---SSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGC  253 (336)
T ss_dssp             CGGGEEE---CTTSCCEEECCCTTCEEC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred             CHHHEEE---eCCCCEEEEeeCCCCeEccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCc
Confidence            9999999   5565 69999999998654322      122357999999999999999999999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHH-------------HcCCcccCCC
Q 009980          242 PPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL-------------LNHPWVIGDS  306 (521)
Q Consensus       242 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~-------------l~h~~~~~~~  306 (521)
                      +||.+.+..+....+.....++ ...++.+|+++++||.+||++||.+|||+.|+             |+|||+....
T Consensus       254 ~Pf~~~~~~~~~~~i~~~~~~~-~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~~~  330 (336)
T 4g3f_A          254 HPWTQYFRGPLCLKIASEPPPI-REIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKGEYK  330 (336)
T ss_dssp             CSSTTTCCSCCHHHHHHSCCGG-GGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSSCC
T ss_pred             CCCCCCCHHHHHHHHHcCCCCc-hhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCcCCCC
Confidence            9999988888888888776543 23457899999999999999999999999997             5799997654

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=3.1e-59  Score=467.82  Aligned_cols=263  Identities=26%  Similarity=0.393  Sum_probs=224.6

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      .+.++|++++.||+|+||+||+|+++.  +++.||||++++....                          ......+.+
T Consensus        51 ~i~~~Y~~~~~lG~G~fG~V~~a~~~~--t~~~vAiK~i~~~~~~--------------------------~~~~~~~~~  102 (398)
T 4b99_A           51 DVGDEYEIIETIGNGAYGVVSSARRRL--TGQQVAIKKIPNAFDV--------------------------VTNAKRTLR  102 (398)
T ss_dssp             CCCSSEEEEEEEEECSSCEEEEEEETT--TCCEEEEEEETTTTSS--------------------------HHHHHHHHH
T ss_pred             CCCCCeEEEEEEecccCeEEEEEEECC--CCCEEEEEEECccccc--------------------------hHHHHHHHH
Confidence            356789999999999999999999998  8899999999653221                          122345788


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEe------CCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYED------QNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ  160 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~------~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~  160 (521)
                      |+.+|+++     +|||||++++++..      .+.+|||||||. |+|.+++...+.+++.+++.++.||+.||.|||+
T Consensus       103 Ei~il~~l-----~HpnIv~l~~~~~~~~~~~~~~~~~ivmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~  176 (398)
T 4b99_A          103 ELKILKHF-----KHDNIIAIKDILRPTVPYGEFKSVYVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHS  176 (398)
T ss_dssp             HHHHHHHC-----CCTTBCCEEEECCCSSCTTTCCCEEEEEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhc-----CCCCcceEeeeeecccccccCCEEEEEEeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            99999999     99999999999764      367999999996 5899999999999999999999999999999999


Q ss_pred             CCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCC-----CCcccccCCcccccccccccC-CCCchhhhHHHHHHH
Q 009980          161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYT-----DPVVGLFGSIDYVSPEALLQD-RITSKSDMWSLGVIL  234 (521)
Q Consensus       161 ~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il  234 (521)
                      +||+||||||+|||+   +.++.+||+|||+|+.....     ....+.+||+.|||||++.+. .|+.++||||+||++
T Consensus       177 ~~iiHRDlKP~NIl~---~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il  253 (398)
T 4b99_A          177 AQVIHRDLKPSNLLV---NENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIF  253 (398)
T ss_dssp             TTCBCCCCCGGGEEE---CTTCCEEECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHH
T ss_pred             CcCcCCCcCcccccc---CCCCCEEEeecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHH
Confidence            999999999999999   78899999999999864322     234567899999999998765 569999999999999


Q ss_pred             HHHHhCCCCCCCCCcHHHHHHHHcCCCCCch---------------------------hhhhccCHHHHHHHHHhccCCC
Q 009980          235 YILLSGYPPFIAQSNRQKQQMIMAGEFSFYE---------------------------QTWKNISSSAKQLISSLLTVDP  287 (521)
Q Consensus       235 ~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~---------------------------~~~~~~s~~~~~li~~~l~~dp  287 (521)
                      |+|++|++||.+.+..+.+..|......++.                           ..++.+|+++++||.+||.+||
T Consensus       254 ~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP  333 (398)
T 4b99_A          254 GEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEP  333 (398)
T ss_dssp             HHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSST
T ss_pred             HHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCCh
Confidence            9999999999999988888877654333222                           1234679999999999999999


Q ss_pred             CCCCCHHHHHcCCcccCCC
Q 009980          288 NRRPSAQELLNHPWVIGDS  306 (521)
Q Consensus       288 ~~R~t~~~~l~h~~~~~~~  306 (521)
                      .+|||+.|+|+||||+...
T Consensus       334 ~~R~ta~e~L~Hp~f~~~~  352 (398)
T 4b99_A          334 SARISAAAALRHPFLAKYH  352 (398)
T ss_dssp             TTSCCHHHHTTSGGGTTTC
T ss_pred             hHCcCHHHHhcCHhhCcCC
Confidence            9999999999999998643

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=2.8e-58  Score=483.24  Aligned_cols=266  Identities=32%  Similarity=0.599  Sum_probs=242.5

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      ..+.++|++++.||+|+||+||+|+++.  +++.||||++.+...                            .....+.
T Consensus       153 ~~il~~Y~i~~~lG~G~fg~V~~~~~~~--tg~~~AiK~i~~~~~----------------------------~~~~~~~  202 (573)
T 3uto_A          153 DHVLDHYDIHEELGTGAFGVVHRVTERA--TGNNFAAKFVMTPHE----------------------------SDKETVR  202 (573)
T ss_dssp             SCGGGTEEEEEEEEEETTEEEEEEEETT--TCCEEEEEEEECCSH----------------------------HHHHHHH
T ss_pred             CcCccccEEEEEEeeccCeEEEEEEECC--CCCEEEEEEEeccch----------------------------hhHHHHH
Confidence            3456899999999999999999999998  889999999965221                            2245688


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQANIV  164 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~al~~lH~~~i~  164 (521)
                      +|+.+|+.+     +|||||+++++|++++.+|||||||+||+|.+++.. .+.+++.+++.++.||+.||.|||++||+
T Consensus       203 ~Ei~il~~l-----~hpnIv~l~~~~~~~~~~~iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~ii  277 (573)
T 3uto_A          203 KEIQTMSVL-----RHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYV  277 (573)
T ss_dssp             HHHHHHHHT-----CCTTBCCEEEEEECSSEEEEEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHhC-----CCCCCCeEEEEEEECCEEEEEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence            999999999     999999999999999999999999999999999964 46799999999999999999999999999


Q ss_pred             eccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCC
Q 009980          165 HRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF  244 (521)
Q Consensus       165 H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf  244 (521)
                      ||||||+|||+.. +..+.+||+|||+|+...........+||+.|||||++.+.+|+.++|||||||++|+|++|.+||
T Consensus       278 HRDlKp~Nill~~-~~~~~vKl~DFG~a~~~~~~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf  356 (573)
T 3uto_A          278 HLDLKPENIMFTT-KRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPF  356 (573)
T ss_dssp             CCCCCGGGEEESS-SSCCCEEECCCSSCEECCTTSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSS
T ss_pred             eccCChhhccccC-CCCCCEEEeeccceeEccCCCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCC
Confidence            9999999999943 234789999999999877666667779999999999999999999999999999999999999999


Q ss_pred             CCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCCC
Q 009980          245 IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSA  307 (521)
Q Consensus       245 ~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~~  307 (521)
                      .+.+..+....|..+.+.++...|..+|+++++||.+||..||.+|||+.|+|+||||+....
T Consensus       357 ~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw~~~~~~  419 (573)
T 3uto_A          357 GGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNA  419 (573)
T ss_dssp             CCSSHHHHHHHHHTTCCCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTSCCCC
T ss_pred             CCcCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcCcCCCCC
Confidence            999999999999999999888889999999999999999999999999999999999986544

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=4.7e-58  Score=454.57  Aligned_cols=260  Identities=26%  Similarity=0.417  Sum_probs=210.8

Q ss_pred             cccccceeecccccccCceEEEEeEEcc-CCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKT-CGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALL   84 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~-~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (521)
                      ..+.++|++.+.||+|+||+||+|+++. .++++.||||.+.+..                              ....+
T Consensus        17 p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~------------------------------~~~~~   66 (361)
T 4f9c_A           17 PQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS------------------------------HPIRI   66 (361)
T ss_dssp             GGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS------------------------------CHHHH
T ss_pred             CCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc------------------------------CHHHH
Confidence            4678899999999999999999999863 3467899999985421                              13357


Q ss_pred             HHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 009980           85 TNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIV  164 (521)
Q Consensus        85 ~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~  164 (521)
                      .+|+.+++.+    .+||||++++++|++++++|||||||+||+|.+++   +.+++.+++.++.||+.||.|||++||+
T Consensus        67 ~~E~~~l~~~----~~h~nIv~l~~~~~~~~~~~lvmE~~~g~~L~~~~---~~l~~~~~~~~~~qll~al~ylH~~gIi  139 (361)
T 4f9c_A           67 AAELQCLTVA----GGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDIL---NSLSFQEVREYMLNLFKALKRIHQFGIV  139 (361)
T ss_dssp             HHHHHHHHHT----CSBTTBCCCSEEEEETTEEEEEEECCCCCCHHHHH---TTCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHHh----cCCCCCceEEEEEEECCEEEEEEeCCCcccHHHHH---cCCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence            7899999887    47999999999999999999999999999999988   3599999999999999999999999999


Q ss_pred             eccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC-----------------------------CcccccCCcccccccc
Q 009980          165 HRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD-----------------------------PVVGLFGSIDYVSPEA  215 (521)
Q Consensus       165 H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-----------------------------~~~~~~gt~~y~aPE~  215 (521)
                      ||||||+|||+.  ...+.+||+|||+|+......                             ...+.+||+.|+|||+
T Consensus       140 HRDiKPeNiLl~--~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~  217 (361)
T 4f9c_A          140 HRDVKPSNFLYN--RRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEV  217 (361)
T ss_dssp             CSCCSGGGEEEE--TTTTEEEECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHH
T ss_pred             eCcCCHHHeEEe--CCCCeEEECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHH
Confidence            999999999993  233689999999997533211                             1234579999999999


Q ss_pred             cccC-CCCchhhhHHHHHHHHHHHhCCCCCCCCCc-HHHHHHHHcC----------------------------------
Q 009980          216 LLQD-RITSKSDMWSLGVILYILLSGYPPFIAQSN-RQKQQMIMAG----------------------------------  259 (521)
Q Consensus       216 ~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~-~~~~~~i~~~----------------------------------  259 (521)
                      +.+. .|+.++||||+||++|+|++|++||...+. .+.+..|..-                                  
T Consensus       218 l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  297 (361)
T 4f9c_A          218 LTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCER  297 (361)
T ss_dssp             HTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHH
T ss_pred             HcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHh
Confidence            9875 589999999999999999999999965543 3333332210                                  


Q ss_pred             ----C------------CCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccC
Q 009980          260 ----E------------FSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIG  304 (521)
Q Consensus       260 ----~------------~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~  304 (521)
                          .            .......|..+|+++++||.+||.+||.+|||++|+|+||||++
T Consensus       298 ~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~  358 (361)
T 4f9c_A          298 LRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKD  358 (361)
T ss_dssp             HC----------------------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTT
T ss_pred             hccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCC
Confidence                0            00111345678999999999999999999999999999999975

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=1.3e-58  Score=446.45  Aligned_cols=256  Identities=27%  Similarity=0.449  Sum_probs=204.5

Q ss_pred             cccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      +.++|++++.||+|+||+||+|+++.  +++.||||+++....                           ......+.+|
T Consensus         3 ~l~dy~~~~~lG~G~fg~V~~a~~~~--~~~~vAiK~i~~~~~---------------------------~~~~~~~~~E   53 (299)
T 4g31_A            3 YLTDFEPIQCLGRGGFGVVFEAKNKV--DDCNYAIKRIRLPNR---------------------------ELAREKVMRE   53 (299)
T ss_dssp             HHHHEEEEEEEEECC--EEEEEEETT--TCCEEEEEEEEECSS---------------------------HHHHHHHHHH
T ss_pred             cchhCEEeeEEecCCCeEEEEEEECC--CCCEEEEEEEeccCC---------------------------HHHHHHHHHH
Confidence            45679999999999999999999998  889999999975321                           1234568899


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEeCC------------eEEEEEeccCCCchHHHHHhcCCC---CHHHHHHHHHHHH
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYEDQN------------GVHLILELCSGGELFDRIVAQERY---MEVGAAAVIRQIA  152 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~~~------------~~~lv~e~~~gg~L~~~l~~~~~~---~~~~~~~i~~qil  152 (521)
                      +.+|+++     +|||||+++++|.+.+            .+|||||||+||+|.+++...+.+   ++..++.|+.||+
T Consensus        54 ~~il~~l-----~HpnIV~~~~~~~~~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~  128 (299)
T 4g31_A           54 VKALAKL-----EHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIA  128 (299)
T ss_dssp             HHHHTTC-----CCTTBCCEEEEEEEEC----------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHH
T ss_pred             HHHHHhC-----CCCCCCeEEEEEEecCccccccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHH
Confidence            9999998     9999999999997654            379999999999999999876654   4466889999999


Q ss_pred             HHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC-------------CcccccCCcccccccccccC
Q 009980          153 EGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD-------------PVVGLFGSIDYVSPEALLQD  219 (521)
Q Consensus       153 ~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-------------~~~~~~gt~~y~aPE~~~~~  219 (521)
                      .||.|||++||+||||||+|||+   +.++.+||+|||+|+......             ...+.+|||.|||||++.+.
T Consensus       129 ~al~ylH~~~IiHRDlKp~NILl---~~~~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~  205 (299)
T 4g31_A          129 EAVEFLHSKGLMHRDLKPSNIFF---TMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGN  205 (299)
T ss_dssp             HHHHHHHHTTCCCCCCCGGGEEE---CTTCCEEECCCCCC--------------------------CCCTTSCHHHHTTC
T ss_pred             HHHHHHHHCcCccccCcHHHeEE---CCCCcEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCC
Confidence            99999999999999999999999   778899999999998654321             12345799999999999999


Q ss_pred             CCCchhhhHHHHHHHHHHHhCCCCCCCCCcH-HHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          220 RITSKSDMWSLGVILYILLSGYPPFIAQSNR-QKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       220 ~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      +|+.++|||||||++|+|++   ||.+.... .....+....+  + +.+...++.+++||.+||+.||.+|||+.++|+
T Consensus       206 ~y~~~~DiwSlGvilyell~---Pf~~~~~~~~~~~~~~~~~~--p-~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  279 (299)
T 4g31_A          206 SYSHKVDIFSLGLILFELLY---PFSTQMERVRTLTDVRNLKF--P-PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE  279 (299)
T ss_dssp             CCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHHHTTCC--C-HHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CCCCHHHHHHHHHHHHHHcc---CCCCccHHHHHHHHHhcCCC--C-CCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            99999999999999999996   77653322 22333444333  2 345667889999999999999999999999999


Q ss_pred             CCcccCCC
Q 009980          299 HPWVIGDS  306 (521)
Q Consensus       299 h~~~~~~~  306 (521)
                      ||||++..
T Consensus       280 h~~~~~~~  287 (299)
T 4g31_A          280 NAVFEDLD  287 (299)
T ss_dssp             SGGGCCC-
T ss_pred             CHhhCCCC
Confidence            99998643

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=4.1e-57  Score=470.86  Aligned_cols=263  Identities=26%  Similarity=0.415  Sum_probs=222.7

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      .-.++|+++++||+|+||+||+|+++.  +++.||||++.+......                         .......+
T Consensus       186 ~slddf~i~k~LG~G~fG~V~la~~~~--tg~~~AiK~i~K~~i~~~-------------------------~~~~~~~~  238 (689)
T 3v5w_A          186 LTMNDFSVHRIIGRGGFGEVYGCRKAD--TGKMYAMKCLDKKRIKMK-------------------------QGETLALN  238 (689)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETT--TCCEEEEEEEEHHHHHHT-------------------------TCHHHHHH
T ss_pred             CchHHeEEEEEEecccCeEEEEEEECC--CCCEEEEEEEeHHHcchh-------------------------hhHHHHHH
Confidence            345789999999999999999999998  889999999976432110                         11233445


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHR  166 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~  166 (521)
                      |..++..+  ...+|||||+++++|++++.+|||||||+||+|.+++.+.+.+++..++.++.||+.||.|||++||+||
T Consensus       239 E~~~l~ll--~~~~HP~IV~l~~~f~~~~~lylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHR  316 (689)
T 3v5w_A          239 ERIMLSLV--STGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYR  316 (689)
T ss_dssp             HHHHHHHH--SSSCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECC
T ss_pred             HHHHHHHH--hhCCCCCEeEEEEEEEECCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccc
Confidence            54444332  1128999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCccccccccccc-CCCCchhhhHHHHHHHHHHHhCCCCCC
Q 009980          167 DLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQ-DRITSKSDMWSLGVILYILLSGYPPFI  245 (521)
Q Consensus       167 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~ll~g~~pf~  245 (521)
                      ||||+|||+   +.++.+||+|||+|+..... ...+.+|||.|||||++.+ ..|+.++|||||||++|+|++|.+||.
T Consensus       317 DLKPeNILl---d~~G~vKL~DFGlA~~~~~~-~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~  392 (689)
T 3v5w_A          317 DLKPANILL---DEHGHVRISDLGLACDFSKK-KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFR  392 (689)
T ss_dssp             CCSGGGEEE---CTTSCEEECCCTTCEECSSC-CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTC
T ss_pred             CCchHHeEE---eCCCCEEecccceeeecCCC-CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence            999999999   88899999999999876533 3456789999999999964 579999999999999999999999997


Q ss_pred             CCC---cHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCC-----HHHHHcCCcccCCC
Q 009980          246 AQS---NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPS-----AQELLNHPWVIGDS  306 (521)
Q Consensus       246 ~~~---~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t-----~~~~l~h~~~~~~~  306 (521)
                      +.+   ..++...+......++    ..+|+++++||.+||.+||.+|++     ++++++||||++-.
T Consensus       393 ~~~~~~~~~i~~~i~~~~~~~p----~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~id  457 (689)
T 3v5w_A          393 QHKTKDKHEIDRMTLTMAVELP----DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLD  457 (689)
T ss_dssp             GGGCCCHHHHHHHHHHCCCCCC----TTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTCC
T ss_pred             CCChHHHHHHHHhhcCCCCCCC----ccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccccCCC
Confidence            643   3345566666666554    568999999999999999999998     79999999998643

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=1.7e-56  Score=456.97  Aligned_cols=301  Identities=37%  Similarity=0.629  Sum_probs=261.5

Q ss_pred             cccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHH
Q 009980            4 ETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDAL   83 (521)
Q Consensus         4 ~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (521)
                      ....+.++|++.+.||+|+||+||+|.++.  +++.||+|++.+....                          ......
T Consensus         5 ~~~~~~~~Y~i~~~LG~G~fg~V~~~~~~~--~~~~~a~K~i~~~~~~--------------------------~~~~~~   56 (444)
T 3soa_A            5 TCTRFTEEYQLFEELGKGAFSVVRRCVKVL--AGQEYAAMIINTKKLS--------------------------ARDHQK   56 (444)
T ss_dssp             --CHHHHHEEEEEEEEEC--CEEEEEEETT--TTEEEEEEEEESCSCH--------------------------HHHHHH
T ss_pred             ccccccCCeEEEEEeccCCCeEEEEEEECC--CCcEEEEEEEEcccCC--------------------------HHHHHH
Confidence            456788999999999999999999999988  8899999999753321                          122455


Q ss_pred             HHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 009980           84 LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANI  163 (521)
Q Consensus        84 ~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i  163 (521)
                      +.+|+.+++++     +||||+++++++.+++..|+|||||.||+|.+.+...+.+++..+..++.||+.||.|||++||
T Consensus        57 ~~~E~~il~~l-----~hpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~gi  131 (444)
T 3soa_A           57 LEREARICRLL-----KHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGV  131 (444)
T ss_dssp             HHHHHHHHHHC-----CBTTBCCEEEEEECSSEEEEEECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHhC-----CCcCCCeEEEEEEECCEEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            88999999998     9999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC-CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCC
Q 009980          164 VHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYP  242 (521)
Q Consensus       164 ~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~  242 (521)
                      +||||||+|||+..+..++.+||+|||+|....... .....+||+.|+|||++.+..|+.++||||+||++|+|++|.+
T Consensus       132 vHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~  211 (444)
T 3soa_A          132 VHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYP  211 (444)
T ss_dssp             BCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSC
T ss_pred             cccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCC
Confidence            999999999999654467889999999997655432 2345689999999999998899999999999999999999999


Q ss_pred             CCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCCCc-chhchHHHHHHHH
Q 009980          243 PFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAK-EEEMDAEIVSRLQ  321 (521)
Q Consensus       243 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~~~-~~~~~~~~~~~~~  321 (521)
                      ||.+.+..+....+..+.+.++.+.|..+|+++++||.+||..||.+|||+.++|+||||...... ........+..++
T Consensus       212 Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp~~~~~~~~~~~~~~~~~~~~l~  291 (444)
T 3soa_A          212 PFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLK  291 (444)
T ss_dssp             SCCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSCTTHHHHHHSCCCCCHHHHHHHH
T ss_pred             CCCCccHHHHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcCccccCCccccccchhhHHHHHHH
Confidence            999999999999999999999988899999999999999999999999999999999999753221 1122356678889


Q ss_pred             hHHHHhHHHHHHHHhh
Q 009980          322 SFNARRKLRAAAIASV  337 (521)
Q Consensus       322 ~~~~~~~~~~~~~~~~  337 (521)
                      .|+.+++++.+.+..+
T Consensus       292 ~~~~~~klk~~~~~~~  307 (444)
T 3soa_A          292 KFNARRKLKGAILTVM  307 (444)
T ss_dssp             HHHHHHHHHTTCSCEE
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999999988766544

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=9.3e-57  Score=432.84  Aligned_cols=253  Identities=24%  Similarity=0.372  Sum_probs=217.0

Q ss_pred             ccceeecccccccCceEEEEeEEccC---CCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTC---GETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      .++|.+.+.||+|+||+||+|+++..   .++..||||+++...                            ......+.
T Consensus        12 r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~----------------------------~~~~~~f~   63 (299)
T 4asz_A           12 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS----------------------------DNARKDFH   63 (299)
T ss_dssp             GGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCC----------------------------HHHHHHHH
T ss_pred             HHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCC----------------------------hHHHHHHH
Confidence            36899999999999999999987531   257789999986421                            12245688


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-------------CCCCHHHHHHHHHHHH
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-------------ERYMEVGAAAVIRQIA  152 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-------------~~~~~~~~~~i~~qil  152 (521)
                      +|+.+|+++     +|||||++++++.+++.+|||||||+||+|.+++...             ..+++.++..|+.||+
T Consensus        64 ~E~~il~~l-----~HpnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia  138 (299)
T 4asz_A           64 REAELLTNL-----QHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIA  138 (299)
T ss_dssp             HHHHHHTTC-----CCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHH
T ss_pred             HHHHHHHhC-----CCCCCccEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHH
Confidence            999999998     9999999999999999999999999999999999764             3699999999999999


Q ss_pred             HHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC---cccccCCcccccccccccCCCCchhhhHH
Q 009980          153 EGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALLQDRITSKSDMWS  229 (521)
Q Consensus       153 ~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Diws  229 (521)
                      .||.|||+++|+||||||+|||+   +.++.+||+|||+|+.......   .....||+.|||||++.+..|+.++||||
T Consensus       139 ~gl~yLH~~~iiHRDlKp~NILl---~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS  215 (299)
T 4asz_A          139 AGMVYLASQHFVHRDLATRNCLV---GENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWS  215 (299)
T ss_dssp             HHHHHHHHTTCCCSCCSGGGEEE---CGGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHH
T ss_pred             HHHHHHHhCCcccCccCHhhEEE---CCCCcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHH
Confidence            99999999999999999999999   7788999999999986443322   22346999999999999999999999999


Q ss_pred             HHHHHHHHHh-CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcc
Q 009980          230 LGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV  302 (521)
Q Consensus       230 lG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~  302 (521)
                      +||++|||+| |++||.+.+..++...+..+.....   +..+|+++.+|+.+||+.||++|||+.+++  +|+
T Consensus       216 ~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~---p~~~~~~~~~li~~cl~~dP~~RPs~~~i~--~~L  284 (299)
T 4asz_A          216 LGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQR---PRTCPQEVYELMLGCWQREPHMRKNIKGIH--TLL  284 (299)
T ss_dssp             HHHHHHHHHTTTCCTTTTSCHHHHHHHHHHTCCCCC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHH--HHH
T ss_pred             HHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCC---CccchHHHHHHHHHHcCCChhHCcCHHHHH--HHH
Confidence            9999999999 9999999999999999988765322   356899999999999999999999999994  454

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=100.00  E-value=1.8e-55  Score=439.13  Aligned_cols=302  Identities=37%  Similarity=0.641  Sum_probs=263.4

Q ss_pred             cccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHH
Q 009980            4 ETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDAL   83 (521)
Q Consensus         4 ~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (521)
                      ....+.++|++.+.||+|+||.||+|.++.  +++.||||++.......                          .....
T Consensus        23 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~--~~~~~avK~~~~~~~~~--------------------------~~~~~   74 (362)
T 2bdw_A           23 ASTKFSDNYDVKEELGKGAFSVVRRCVHKT--TGLEFAAKIINTKKLSA--------------------------RDFQK   74 (362)
T ss_dssp             -CCHHHHHEEEEEEEEEETTEEEEEEEETT--TCCEEEEEEEETTTCCH--------------------------HHHHH
T ss_pred             CCCCcccCeEEeeEEecCCCeEEEEEEECC--CCCEEEEEEEEcccCCH--------------------------HHHHH
Confidence            345677899999999999999999999988  78899999997533211                          12345


Q ss_pred             HHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 009980           84 LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANI  163 (521)
Q Consensus        84 ~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i  163 (521)
                      +.+|+.+++++     +||||+++++++.+.+..|+|||||.||+|.+.+...+.+++..+..++.||+.||.|||++||
T Consensus        75 ~~~E~~il~~l-----~hpnIv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~i  149 (362)
T 2bdw_A           75 LEREARICRKL-----QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGI  149 (362)
T ss_dssp             HHHHHHHHHHC-----CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHhC-----CCCCCCeEEEEEEeCCEEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            78999999998     9999999999999999999999999999999999988899999999999999999999999999


Q ss_pred             eeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCC
Q 009980          164 VHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPP  243 (521)
Q Consensus       164 ~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~p  243 (521)
                      +||||||+|||+..+...+.+||+|||++............+||+.|+|||++.+..|+.++|||||||++|+|++|.+|
T Consensus       150 vH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~P  229 (362)
T 2bdw_A          150 VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP  229 (362)
T ss_dssp             BCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             EeccCchHHEEEecCCCCCCEEEeecCcceEecCCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCC
Confidence            99999999999955445567999999999876655555567899999999999988999999999999999999999999


Q ss_pred             CCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCCCc-chhchHHHHHHHHh
Q 009980          244 FIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAK-EEEMDAEIVSRLQS  322 (521)
Q Consensus       244 f~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~~~-~~~~~~~~~~~~~~  322 (521)
                      |.+.+..+....+..+.+.++...|..+|+++++||.+||..||.+|||+.++|+||||...... ...........+++
T Consensus       230 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~~~~~~~~~~~~~l~~  309 (362)
T 2bdw_A          230 FWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRERVASAIHRQDTVDCLKK  309 (362)
T ss_dssp             SCCSSHHHHHHHHHHTCCCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTSHHHHTHHHHSCCCCCHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcccCCCcccccccchhhHHHHHHH
Confidence            99999999999999999988888899999999999999999999999999999999999753211 11223456778889


Q ss_pred             HHHHhHHHHHHHHhhh
Q 009980          323 FNARRKLRAAAIASVL  338 (521)
Q Consensus       323 ~~~~~~~~~~~~~~~~  338 (521)
                      |..+++++.+.+..+.
T Consensus       310 ~~~~~~~~~~~~~~~~  325 (362)
T 2bdw_A          310 FNARRKLKGAILTTMI  325 (362)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999999888776544

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=2.7e-55  Score=436.72  Aligned_cols=301  Identities=33%  Similarity=0.564  Sum_probs=250.2

Q ss_pred             ccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHH
Q 009980            5 TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALL   84 (521)
Q Consensus         5 ~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (521)
                      ...+.++|++++.||+|+||.||+|+++.  +++.||||++.+......                      ........+
T Consensus         7 ~~~~~~~y~~~~~LG~G~fg~V~~~~~~~--~~~~~avK~i~~~~~~~~----------------------~~~~~~~~~   62 (361)
T 2yab_A            7 QQKVEDFYDIGEELGSGQFAIVKKCREKS--TGLEYAAKFIKKRQSRAS----------------------RRGVCREEI   62 (361)
T ss_dssp             CSCGGGTEEEEEEEEEETTEEEEEEEETT--TCCEEEEEEEEBCSSTTC----------------------SSSBCHHHH
T ss_pred             CCChhhceEEeeEEeeCcCEEEEEEEECC--CCCEEEEEEEEccccccc----------------------cchhHHHHH
Confidence            46788999999999999999999999998  788999999987543221                      011234568


Q ss_pred             HHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 009980           85 TNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIV  164 (521)
Q Consensus        85 ~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~  164 (521)
                      .+|+.+++++     +||||+++++++.+.+.+|+|||||.||+|.+++...+.+++..+..++.||+.||.|||++||+
T Consensus        63 ~~E~~il~~l-----~hpnIv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giv  137 (361)
T 2yab_A           63 EREVSILRQV-----LHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIA  137 (361)
T ss_dssp             HHHHHHHTTC-----CCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHhC-----CCcCCCcEEEEEEeCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence            8999999998     89999999999999999999999999999999999888999999999999999999999999999


Q ss_pred             eccCCCCcEEEeeCCC-CCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCC
Q 009980          165 HRDLKPENCLFLNDRE-DSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPP  243 (521)
Q Consensus       165 H~dlkp~Nil~~~~~~-~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~p  243 (521)
                      ||||||+|||+..+.. ...+||+|||++............+||+.|+|||++.+..|+.++|||||||++|+|++|.+|
T Consensus       138 HrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~P  217 (361)
T 2yab_A          138 HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP  217 (361)
T ss_dssp             CCCCSGGGEEESCTTSSSCCEEECCCSSCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCS
T ss_pred             cCCCCHHHEEEeCCCCCccCEEEEecCCceEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCC
Confidence            9999999999933211 127999999999876655555667899999999999988999999999999999999999999


Q ss_pred             CCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCCCcchhc---hHHHHHHH
Q 009980          244 FIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAKEEEM---DAEIVSRL  320 (521)
Q Consensus       244 f~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~~~~~~~---~~~~~~~~  320 (521)
                      |.+.+..+....+..+.+.++...|..+|+.+++||.+||..||.+|||+.++|+||||..........   ....+.++
T Consensus       218 f~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~~~~~~~~~~~~~~~~  297 (361)
T 2yab_A          218 FLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDTQQAMVRRESVVNLENF  297 (361)
T ss_dssp             SCCSSHHHHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTSCSSHHHHHHHHTCBCCHHHH
T ss_pred             CCCCCHHHHHHHHHhcCCCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcCcCcCCCchhhhhhcccchhhHHHH
Confidence            999999999999999999999888999999999999999999999999999999999998643221110   00113344


Q ss_pred             HhHHHHhHHHHHHH
Q 009980          321 QSFNARRKLRAAAI  334 (521)
Q Consensus       321 ~~~~~~~~~~~~~~  334 (521)
                      +++..+++++.+..
T Consensus       298 ~~~~~~~~~~~~~~  311 (361)
T 2yab_A          298 KKQYVRRRWKLSFS  311 (361)
T ss_dssp             HHHTC---------
T ss_pred             HHHHHHhHHHHHHH
Confidence            55555666665544

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=5.7e-56  Score=427.26  Aligned_cols=251  Identities=26%  Similarity=0.477  Sum_probs=205.6

Q ss_pred             ccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEI   88 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   88 (521)
                      .+++++.+.||+|+||+||+|+.+.     .||||+++.....                          ......+.+|+
T Consensus        35 ~~~l~l~~~iG~G~fG~Vy~~~~~~-----~vAvK~~~~~~~~--------------------------~~~~~~f~~E~   83 (307)
T 3omv_A           35 ASEVMLSTRIGSGSFGTVYKGKWHG-----DVAVKILKVVDPT--------------------------PEQFQAFRNEV   83 (307)
T ss_dssp             TTSCCEEEECCCCSSSEEEEEESSS-----EEEEEECCCSSCC--------------------------HHHHHHHHHHH
T ss_pred             HHHeEEeeEEeeCCCcEEEEEEECC-----cEEEEEEEecCCC--------------------------HHHHHHHHHHH
Confidence            4678899999999999999998653     4999998643211                          12235688999


Q ss_pred             HHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecc
Q 009980           89 LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQANIVHRD  167 (521)
Q Consensus        89 ~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~~~i~H~d  167 (521)
                      .+++++     +|||||++++++. ++.+|||||||+||+|.+++... +++++.++..|+.||+.||.|||+++|+|||
T Consensus        84 ~il~~l-----~HpNIV~l~g~~~-~~~~~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRD  157 (307)
T 3omv_A           84 AVLRKT-----RHVNILLFMGYMT-KDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRD  157 (307)
T ss_dssp             HHHTTC-----CCTTBCCEEEEEC-SSSCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSC
T ss_pred             HHHHhC-----CCCCEeeEEEEEE-CCeEEEEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCc
Confidence            999998     9999999999875 45689999999999999999754 5799999999999999999999999999999


Q ss_pred             CCCCcEEEeeCCCCCCEEEeecCCCccCCCC---CCcccccCCccccccccccc---CCCCchhhhHHHHHHHHHHHhCC
Q 009980          168 LKPENCLFLNDREDSPLKIMDFGLSSVEGYT---DPVVGLFGSIDYVSPEALLQ---DRITSKSDMWSLGVILYILLSGY  241 (521)
Q Consensus       168 lkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwslG~il~~ll~g~  241 (521)
                      |||+|||+   +.++.+||+|||+|+.....   ......+||+.|||||++.+   ++|+.++|||||||++|||+||+
T Consensus       158 lKp~NILl---~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~  234 (307)
T 3omv_A          158 MKSNNIFL---HEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGE  234 (307)
T ss_dssp             CCSSSEEE---ETTEEEEECCCSSCBC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSS
T ss_pred             cCHHHEEE---CCCCcEEEeeccCceecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCC
Confidence            99999999   77889999999999865422   22345689999999999964   46899999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHHcCCCCCc--hhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          242 PPFIAQSNRQKQQMIMAGEFSFY--EQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       242 ~pf~~~~~~~~~~~i~~~~~~~~--~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      +||.+.+.......+.......+  ...+.++|+++++|+.+||+.||++|||+.+++++
T Consensus       235 ~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~  294 (307)
T 3omv_A          235 LPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSS  294 (307)
T ss_dssp             CTTTTCCCHHHHHHHHHTTCCCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHH
T ss_pred             CCCCCCChHHHHHHHHhcCCCCCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            99988776655554444333222  34457799999999999999999999999988654

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=1.1e-55  Score=431.18  Aligned_cols=252  Identities=23%  Similarity=0.339  Sum_probs=211.2

Q ss_pred             ccceeecccccccCceEEEEeEEcc---CCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKT---CGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~---~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      .++|.+.+.||+|+||+||+|+.+.   ..+++.||||+++...                            ......+.
T Consensus        40 ~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~----------------------------~~~~~~f~   91 (329)
T 4aoj_A           40 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS----------------------------ESARQDFQ   91 (329)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCS----------------------------HHHHHHHH
T ss_pred             HHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCC----------------------------HHHHHHHH
Confidence            3578899999999999999998752   1257889999986421                            12245689


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc---------------CCCCHHHHHHHHHH
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ---------------ERYMEVGAAAVIRQ  150 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~---------------~~~~~~~~~~i~~q  150 (521)
                      +|+.+|+++     +|||||++++++.+++.+|||||||+||+|.+++...               +++++.++..|+.|
T Consensus        92 ~E~~il~~l-----~HpnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~q  166 (329)
T 4aoj_A           92 REAELLTML-----QHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ  166 (329)
T ss_dssp             HHHHHHTTC-----CCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHH
T ss_pred             HHHHHHHhC-----CCCCCCcEEEEEEECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHH
Confidence            999999998     9999999999999999999999999999999998753               35899999999999


Q ss_pred             HHHHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC---CcccccCCcccccccccccCCCCchhhh
Q 009980          151 IAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD---PVVGLFGSIDYVSPEALLQDRITSKSDM  227 (521)
Q Consensus       151 il~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Di  227 (521)
                      |+.||.|||+++|+||||||+|||+   +.++.+||+|||+|+......   .....+||+.|||||++.+..|+.++||
T Consensus       167 ia~gl~yLH~~~iiHRDLKp~NILl---~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDv  243 (329)
T 4aoj_A          167 VAAGMVYLAGLHFVHRDLATRNCLV---GQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDV  243 (329)
T ss_dssp             HHHHHHHHHHTTCCCSCCCGGGEEE---ETTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHH
T ss_pred             HHHHHHHHhcCCeecccccHhhEEE---CCCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccc
Confidence            9999999999999999999999999   778899999999998653322   2234579999999999999999999999


Q ss_pred             HHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          228 WSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       228 wslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      |||||++|||+| |++||.+.+..+....+..+....   .+..+|+++.+|+.+||+.||++|||+.+++.+
T Consensus       244 wS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~g~~~~---~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~  313 (329)
T 4aoj_A          244 WSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELE---RPRACPPEVYAIMRGCWQREPQQRHSIKDVHAR  313 (329)
T ss_dssp             HHHHHHHHHHHTTSCCTTCSSCHHHHHHHHHHTCCCC---CCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHH
T ss_pred             cchHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCC---CcccccHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence            999999999999 999999999998888888775322   235689999999999999999999999999863

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=2.1e-55  Score=425.26  Aligned_cols=254  Identities=26%  Similarity=0.388  Sum_probs=218.3

Q ss_pred             cccceeecccccccCceEEEEeEEcc---CCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKT---CGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALL   84 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~---~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (521)
                      -..++++.+.||+|+||+||+|+...   ..+++.||||+++.....                           .....+
T Consensus        24 ~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~---------------------------~~~~~f   76 (308)
T 4gt4_A           24 SLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEG---------------------------PLREEF   76 (308)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC----------------------------CHHHH
T ss_pred             CHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccCh---------------------------HHHHHH
Confidence            34678999999999999999998642   125678999998643211                           124568


Q ss_pred             HHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc----------------CCCCHHHHHHHH
Q 009980           85 TNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ----------------ERYMEVGAAAVI  148 (521)
Q Consensus        85 ~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~----------------~~~~~~~~~~i~  148 (521)
                      .+|+.+++++     +|||||++++++.+++.+|||||||+||+|.+++...                ..+++.++..|+
T Consensus        77 ~~E~~il~~l-----~HpNIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~  151 (308)
T 4gt4_A           77 RHEAMLRARL-----QHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV  151 (308)
T ss_dssp             HHHHHHHHHC-----CCTTBCCEEEEECSSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHH
T ss_pred             HHHHHHHHhC-----CCCCCCCcceEEEECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHH
Confidence            9999999999     9999999999999999999999999999999999653                358999999999


Q ss_pred             HHHHHHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC---CcccccCCcccccccccccCCCCchh
Q 009980          149 RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD---PVVGLFGSIDYVSPEALLQDRITSKS  225 (521)
Q Consensus       149 ~qil~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~  225 (521)
                      .||+.||.|||+++|+||||||+|||+   +.++.+||+|||+|+......   .....+||+.|||||++.++.|+.++
T Consensus       152 ~qia~gl~yLH~~~iiHRDLK~~NILl---~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ks  228 (308)
T 4gt4_A          152 AQIAAGMEYLSSHHVVHKDLATRNVLV---YDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDS  228 (308)
T ss_dssp             HHHHHHHHHHHHTTCCCSCCSGGGEEE---CGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHH
T ss_pred             HHHHHHHHHHHhCCCCCCCccccceEE---CCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccc
Confidence            999999999999999999999999999   778899999999998643222   23446799999999999999999999


Q ss_pred             hhHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          226 DMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       226 DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      ||||+||++|||+| |.+||.+.+..++...+..+.....   +..+|+++.+|+.+||+.||.+|||+.+++++
T Consensus       229 DVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~~~~~~~~---p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~  300 (308)
T 4gt4_A          229 DIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPC---PDDCPAWVYALMIECWNEFPSRRPRFKDIHSR  300 (308)
T ss_dssp             HHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHTTCCCCC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             hhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC---cccchHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            99999999999998 8999999999999988888764322   35789999999999999999999999999874

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=100.00  E-value=3.1e-54  Score=428.88  Aligned_cols=305  Identities=32%  Similarity=0.561  Sum_probs=247.5

Q ss_pred             ccccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHH
Q 009980            3 QETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDA   82 (521)
Q Consensus         3 ~~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (521)
                      .....+.++|++.+.||+|+||+||+|+++.  +++.||||++........                       ......
T Consensus        17 ~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~--~~~~vavK~~~~~~~~~~-----------------------~~~~~~   71 (351)
T 3c0i_A           17 DDDVLFEDVYELCEVIGKGPFSVVRRCINRE--TGQQFAVKIVDVAKFTSS-----------------------PGLSTE   71 (351)
T ss_dssp             ---CCHHHHEEEEEEEEECSSEEEEEEEETT--TCCEEEEEEEEHHHHHTS-----------------------SSCCHH
T ss_pred             CCCCccccceEEeeEEeeCCCEEEEEEEECC--CCCEEEEEEEEhhhcccc-----------------------ccchHH
Confidence            3455678899999999999999999999988  789999999975322110                       012245


Q ss_pred             HHHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc----CCCCHHHHHHHHHHHHHHHHHH
Q 009980           83 LLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ----ERYMEVGAAAVIRQIAEGLAAL  158 (521)
Q Consensus        83 ~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~----~~~~~~~~~~i~~qil~al~~l  158 (521)
                      .+.+|+.+++.+     +||||+++++++.+++.+|+|||||+|++|.+.+...    ..+++..+..++.||+.||.||
T Consensus        72 ~~~~E~~~l~~l-----~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~l  146 (351)
T 3c0i_A           72 DLKREASICHML-----KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYC  146 (351)
T ss_dssp             HHHHHHHHHHHC-----CCTTBCCEEEEEEETTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhC-----CCCCCCcEEEEEEeCCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHH
Confidence            688999999998     9999999999999999999999999999998887643    3589999999999999999999


Q ss_pred             HHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC-cccccCCcccccccccccCCCCchhhhHHHHHHHHHH
Q 009980          159 HQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP-VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYIL  237 (521)
Q Consensus       159 H~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l  237 (521)
                      |++||+||||||+|||+..++....+||+|||++........ ....+||+.|+|||++.+..|+.++|||||||++|+|
T Consensus       147 H~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l  226 (351)
T 3c0i_A          147 HDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFIL  226 (351)
T ss_dssp             HHTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHH
T ss_pred             HHCCceeccCChHHeEEecCCCCCcEEEecCcceeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHH
Confidence            999999999999999995544556699999999987654332 3456799999999999998999999999999999999


Q ss_pred             HhCCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCCC-cchhchHHH
Q 009980          238 LSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSA-KEEEMDAEI  316 (521)
Q Consensus       238 l~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~~-~~~~~~~~~  316 (521)
                      ++|.+||.+. ..+....+..+...+....|..+|+++++||.+||..||.+|||+.++|+||||..... .........
T Consensus       227 l~g~~pf~~~-~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~~~~~~~~~~~~~  305 (351)
T 3c0i_A          227 LSGCLPFYGT-KERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPET  305 (351)
T ss_dssp             HHSSCSSCSS-HHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTHHHHSCCSCCHHH
T ss_pred             HHCCCCCCCc-HHHHHHHHHcCCCCCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcChhhcCCccccccccchHH
Confidence            9999999875 45677778888888888888899999999999999999999999999999999975321 111223455


Q ss_pred             HHHHHhHHHHhHHHHHHHHhhh
Q 009980          317 VSRLQSFNARRKLRAAAIASVL  338 (521)
Q Consensus       317 ~~~~~~~~~~~~~~~~~~~~~~  338 (521)
                      ..+++.+..+++++.+.++.+.
T Consensus       306 ~~~l~~~~~~~~~~~~~~~~~~  327 (351)
T 3c0i_A          306 VEQLRKFNARRKLKGAVLAAVS  327 (351)
T ss_dssp             HHHHHHHHHHHC----------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH
Confidence            6788899999998887776544

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=1.3e-53  Score=419.70  Aligned_cols=262  Identities=31%  Similarity=0.548  Sum_probs=235.5

Q ss_pred             cccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHH
Q 009980            4 ETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDAL   83 (521)
Q Consensus         4 ~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (521)
                      +.....++|++.+.||+|+||.||+|+++.  +++.||||++.+....                          ......
T Consensus         9 ~~~~~~~~y~~~~~lG~G~~g~V~~a~~~~--~~~~vaiK~~~~~~~~--------------------------~~~~~~   60 (328)
T 3fe3_A            9 DEQPHIGNYRLLKTIGKGNFAKVKLARHIL--TGREVAIKIIDKTQLN--------------------------PTSLQK   60 (328)
T ss_dssp             --CCEETTEEEEEEEEECSSEEEEEEEETT--TCCEEEEEEEEGGGSC--------------------------HHHHHH
T ss_pred             ccCCccCCEEEEEEEeeCCCEEEEEEEECC--CCCEEEEEEEEhhcCC--------------------------HHHHHH
Confidence            345667899999999999999999999988  7889999999764321                          122345


Q ss_pred             HHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 009980           84 LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANI  163 (521)
Q Consensus        84 ~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i  163 (521)
                      +.+|+.+++.+     +||||+++++++.+.+.+|+||||++||+|.+++...+++++..++.++.||+.||.|||++||
T Consensus        61 ~~~E~~~l~~l-----~hpnIv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i  135 (328)
T 3fe3_A           61 LFREVRIMKIL-----NHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRI  135 (328)
T ss_dssp             HHHHHHHHHHC-----CCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHhC-----CCCCEeeEEEEEEECCEEEEEEECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            78999999998     9999999999999999999999999999999999988999999999999999999999999999


Q ss_pred             eeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCC-chhhhHHHHHHHHHHHhCCC
Q 009980          164 VHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRIT-SKSDMWSLGVILYILLSGYP  242 (521)
Q Consensus       164 ~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwslG~il~~ll~g~~  242 (521)
                      +||||||+|||+   +.++.+||+|||+|............+||+.|+|||++.+..+. .++||||+||++|+|++|.+
T Consensus       136 vHrDlkp~NIll---~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~  212 (328)
T 3fe3_A          136 VHRDLKAENLLL---DADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL  212 (328)
T ss_dssp             CCSCCCGGGEEE---CTTSCEEECSTTCCGGGSSSCGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSC
T ss_pred             eccCCCHHHEEE---cCCCCEEEeeccCceecCCCCccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCC
Confidence            999999999999   78889999999999876655556677899999999999888775 89999999999999999999


Q ss_pred             CCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCC
Q 009980          243 PFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGD  305 (521)
Q Consensus       243 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~  305 (521)
                      ||.+.+..+....+..+.+..+    ..+|+++.+||.+||..||.+|||++++++||||...
T Consensus       213 pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~  271 (328)
T 3fe3_A          213 PFDGQNLKELRERVLRGKYRIP----FYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAG  271 (328)
T ss_dssp             SSCCSSHHHHHHHHHHCCCCCC----TTSCHHHHHHHHHHCCSSTTTSCCHHHHTTCTTTTTT
T ss_pred             CCCCCCHHHHHHHHHhCCCCCC----CCCCHHHHHHHHHHCCCChhHCcCHHHHhcCHhhcCC
Confidence            9999999999999998887765    3479999999999999999999999999999999754

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=100.00  E-value=2.6e-53  Score=421.81  Aligned_cols=297  Identities=40%  Similarity=0.655  Sum_probs=243.2

Q ss_pred             cccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHH
Q 009980            4 ETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDAL   83 (521)
Q Consensus         4 ~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (521)
                      ....+.++|++.+.||+|+||.||+|+++.  +++.||||++....                              ....
T Consensus        47 ~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~--~~~~vavK~~~~~~------------------------------~~~~   94 (349)
T 2w4o_A           47 NRDALSDFFEVESELGRGATSIVYRCKQKG--TQKPYALKVLKKTV------------------------------DKKI   94 (349)
T ss_dssp             BCSCGGGTEEEEEEEEECSSEEEEEEEETT--TCCEEEEEEEEC------------------------------------
T ss_pred             ccccccCcEEEeeEEeeCCCEEEEEEEECC--CCcEEEEEEeccch------------------------------hHHH
Confidence            456678899999999999999999999987  78899999997532                              1234


Q ss_pred             HHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 009980           84 LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANI  163 (521)
Q Consensus        84 ~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i  163 (521)
                      +.+|+.+++++     .||||+++++++.+++..|+||||+.||+|.+++...+.+++.++..++.||+.||.|||++||
T Consensus        95 ~~~E~~~l~~l-----~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i  169 (349)
T 2w4o_A           95 VRTEIGVLLRL-----SHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGI  169 (349)
T ss_dssp             ----CHHHHHC-----CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHhC-----CCCCCcceeeeEecCCeEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            67899999998     9999999999999999999999999999999999988889999999999999999999999999


Q ss_pred             eeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCC
Q 009980          164 VHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPP  243 (521)
Q Consensus       164 ~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~p  243 (521)
                      +||||||+||++...+.++.+||+|||+++...........+||+.|+|||++.+..++.++|||||||++|+|++|..|
T Consensus       170 vH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~p  249 (349)
T 2w4o_A          170 VHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEP  249 (349)
T ss_dssp             CCCCCCGGGEEESSSSTTCCEEECCCC----------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCT
T ss_pred             EecCCCcccEEEecCCCCCCEEEccCccccccCcccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCC
Confidence            99999999999954445789999999999876544444556799999999999998999999999999999999999999


Q ss_pred             CCCCCcHH-HHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCCCcchhchHHHHHHHHh
Q 009980          244 FIAQSNRQ-KQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAKEEEMDAEIVSRLQS  322 (521)
Q Consensus       244 f~~~~~~~-~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~~~~~~~~~~~~~~~~~  322 (521)
                      |.+..... ....+......++.+.|..+|.++++||.+||..||.+|||+.++|+||||.+....... ......+++.
T Consensus       250 f~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~~~~~-~~~~~~~~~~  328 (349)
T 2w4o_A          250 FYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVTGKAANFVH-MDTAQKKLQE  328 (349)
T ss_dssp             TCCTTCHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTTSTTCCCSC-CHHHHHHHHH
T ss_pred             CCCCcccHHHHHHHHhCCCccCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCccchhh-hcchHHHHHH
Confidence            98766554 667788887777777788899999999999999999999999999999999876654433 3455677899


Q ss_pred             HHHHhHHHHHHHHhhh
Q 009980          323 FNARRKLRAAAIASVL  338 (521)
Q Consensus       323 ~~~~~~~~~~~~~~~~  338 (521)
                      ++.+++++++....++
T Consensus       329 ~~~~~~~~~~~~~~~~  344 (349)
T 2w4o_A          329 FNARRKLKAAVKAVVA  344 (349)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999999887765544

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.2e-53  Score=419.27  Aligned_cols=264  Identities=32%  Similarity=0.582  Sum_probs=239.2

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      +.+.++|++.+.||+|+||.||+|.++.  +++.||+|++....                             .....+.
T Consensus         1 k~~~~~y~~~~~lG~G~~g~Vy~~~~~~--~~~~~a~K~~~~~~-----------------------------~~~~~~~   49 (321)
T 1tki_A            1 KELYEKYMIAEDLGRGEFGIVHRCVETS--SKKTYMAKFVKVKG-----------------------------TDQVLVK   49 (321)
T ss_dssp             CCCTTTEEEEEEEEECSSEEEEEEEETT--TTEEEEEEEECCCT-----------------------------HHHHHHH
T ss_pred             CchhhceEeeeEEecCCCeEEEEEEECC--CCcEEEEEEEecCc-----------------------------ccHHHHH
Confidence            3578999999999999999999999988  78899999985321                             2234578


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQANIV  164 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~~~i~  164 (521)
                      +|+.+++.+     +||||+++++++.+.+.+|+|||||+||+|.+++... ..+++..++.++.||+.||.|||++||+
T Consensus        50 ~E~~~l~~l-----~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~giv  124 (321)
T 1tki_A           50 KEISILNIA-----RHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIG  124 (321)
T ss_dssp             HHHHHHHHS-----CCTTBCCEEEEEEETTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHhC-----CCCCCCeEeEEEecCCEEEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
Confidence            999999998     9999999999999999999999999999999999765 4799999999999999999999999999


Q ss_pred             eccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCC
Q 009980          165 HRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF  244 (521)
Q Consensus       165 H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf  244 (521)
                      ||||||+|||+.. ..++.+||+|||++.............||+.|+|||++.+..++.++||||+||++|+|++|.+||
T Consensus       125 H~Dlkp~NIl~~~-~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf  203 (321)
T 1tki_A          125 HFDIRPENIIYQT-RRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPF  203 (321)
T ss_dssp             CCCCCGGGEEESS-SSCCCEEECCCTTCEECCTTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTT
T ss_pred             cCCCCHHHEEEcc-CCCCCEEEEECCCCeECCCCCccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence            9999999999932 126889999999998776555556678999999999999888999999999999999999999999


Q ss_pred             CCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCC
Q 009980          245 IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDS  306 (521)
Q Consensus       245 ~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~  306 (521)
                      .+.+..+....+..+.+.++...|..+|+++++||.+||..||.+|||+.++|+||||....
T Consensus       204 ~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~~  265 (321)
T 1tki_A          204 LAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQKI  265 (321)
T ss_dssp             CCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSCG
T ss_pred             cCCCHHHHHHHHHcCCCCCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcChhhccCc
Confidence            99999999999999999998888999999999999999999999999999999999998653

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=100.00  E-value=3.6e-53  Score=417.01  Aligned_cols=273  Identities=36%  Similarity=0.636  Sum_probs=242.7

Q ss_pred             ccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHH
Q 009980            5 TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALL   84 (521)
Q Consensus         5 ~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (521)
                      ...+.++|++.+.||+|+||.||+|+++.  +++.||||++.+......                      ........+
T Consensus         6 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~--~~~~~avK~~~~~~~~~~----------------------~~~~~~~~~   61 (326)
T 2y0a_A            6 QENVDDYYDTGEELGSGQFAVVKKCREKS--TGLQYAAKFIKKRRTKSS----------------------RRGVSREDI   61 (326)
T ss_dssp             CSCHHHHEEEEEEEECCSSEEEEEEEETT--TCCEEEEEEEEBCCSTTC----------------------SSSBCHHHH
T ss_pred             cCCcccceEeceEEeeCCCeEEEEEEECC--CCcEEEEEEEEccccccc----------------------cchhhHHHH
Confidence            45778899999999999999999999988  788999999986543221                      011234568


Q ss_pred             HHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 009980           85 TNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIV  164 (521)
Q Consensus        85 ~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~  164 (521)
                      .+|+.+++++     +||||+++++++.+.+.+|+||||+.|++|.+++...+.+++..+..++.||+.||.|||++||+
T Consensus        62 ~~E~~~l~~l-----~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~iv  136 (326)
T 2y0a_A           62 EREVSILKEI-----QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIA  136 (326)
T ss_dssp             HHHHHHHHHC-----CCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHhC-----CCCCCCcEEEEEEeCCEEEEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence            8999999999     99999999999999999999999999999999998888999999999999999999999999999


Q ss_pred             eccCCCCcEEEeeCC-CCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCC
Q 009980          165 HRDLKPENCLFLNDR-EDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPP  243 (521)
Q Consensus       165 H~dlkp~Nil~~~~~-~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~p  243 (521)
                      ||||||+||++..+. ....+||+|||+++...........+||+.|+|||++.+..++.++|||||||++|+|++|.+|
T Consensus       137 H~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~p  216 (326)
T 2y0a_A          137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP  216 (326)
T ss_dssp             CCCCCGGGEEESCSSSSSCCEEECCCTTCEECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCS
T ss_pred             cCCCCHHHEEEecCCCCCCCEEEEECCCCeECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCC
Confidence            999999999993322 1237999999999876655555567899999999999988999999999999999999999999


Q ss_pred             CCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCC
Q 009980          244 FIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDS  306 (521)
Q Consensus       244 f~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~  306 (521)
                      |.+.+..+....+......++...+..+|+.+++||.+||..||.+|||+.++|+||||....
T Consensus       217 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~  279 (326)
T 2y0a_A          217 FLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKD  279 (326)
T ss_dssp             SCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTSCCS
T ss_pred             CCCCCHHHHHHHHHhcCCCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcCCCccCCc
Confidence            999998888888888888888888889999999999999999999999999999999998643

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=4.6e-54  Score=423.07  Aligned_cols=255  Identities=24%  Similarity=0.344  Sum_probs=212.2

Q ss_pred             cccceeecccccccCceEEEEeEEccC---CCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTC---GETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALL   84 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (521)
                      -.++|++++.||+|+||+||+|.++..   .+++.||||.+.....                           ......+
T Consensus        62 ~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~---------------------------~~~~~~~  114 (353)
T 4ase_A           62 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT---------------------------HSEHRAL  114 (353)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCC---------------------------HHHHHHH
T ss_pred             cHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccC---------------------------hHHHHHH
Confidence            357899999999999999999997642   1346899999864221                           1223568


Q ss_pred             HHHHHHHHHHhhccCCCCCccceeEEEEeC-CeEEEEEeccCCCchHHHHHhc----------------CCCCHHHHHHH
Q 009980           85 TNEILVMRKIVENVSPHPNVIDLYDVYEDQ-NGVHLILELCSGGELFDRIVAQ----------------ERYMEVGAAAV  147 (521)
Q Consensus        85 ~~E~~~l~~l~~~~~~hpniv~~~~~~~~~-~~~~lv~e~~~gg~L~~~l~~~----------------~~~~~~~~~~i  147 (521)
                      .+|+.+|.++    .+|||||++++++..+ +.+|||||||+||+|.++|...                ..+++.++..+
T Consensus       115 ~~E~~il~~l----~hhpnIV~l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  190 (353)
T 4ase_A          115 MSELKILIHI----GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY  190 (353)
T ss_dssp             HHHHHHHHHH----CCCTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHH
T ss_pred             HHHHHHHHHc----CCCCcEEEEEEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHH
Confidence            8999999999    3459999999998664 5789999999999999999753                34899999999


Q ss_pred             HHHHHHHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC---cccccCCcccccccccccCCCCch
Q 009980          148 IRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALLQDRITSK  224 (521)
Q Consensus       148 ~~qil~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~  224 (521)
                      +.||+.||.|||+++|+||||||+|||+   +.++.+||+|||+|+.......   ....+||+.|||||++.+..|+.+
T Consensus       191 ~~qia~gl~yLH~~~iiHRDLK~~NILl---~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~k  267 (353)
T 4ase_A          191 SFQVAKGMEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ  267 (353)
T ss_dssp             HHHHHHHHHHHHHTTCCCSCCSGGGEEE---CGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHH
T ss_pred             HHHHHHHHHhHhhCCeecCccCccceee---CCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCc
Confidence            9999999999999999999999999999   7788999999999986543322   234579999999999999999999


Q ss_pred             hhhHHHHHHHHHHHh-CCCCCCCCCcH-HHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          225 SDMWSLGVILYILLS-GYPPFIAQSNR-QKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       225 ~DiwslG~il~~ll~-g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      +||||+||++|||+| |.+||.+.+.. .....+..+....   .+..+|+++.+++.+||+.||.+|||+.++++|
T Consensus       268 sDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~~g~~~~---~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~  341 (353)
T 4ase_A          268 SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR---APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  341 (353)
T ss_dssp             HHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ccEeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHHcCCCCC---CCccCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence            999999999999998 99999887644 4445555553221   225689999999999999999999999999986

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=100.00  E-value=3.3e-52  Score=415.61  Aligned_cols=261  Identities=33%  Similarity=0.524  Sum_probs=211.8

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      ...++|++.+.||+|+||+||+|+++.  +++.||||++.+...                             ....+.+
T Consensus        17 ~~~~~y~~~~~lG~G~~g~V~~~~~~~--~~~~vavK~~~~~~~-----------------------------~~~~~~~   65 (361)
T 3uc3_A           17 HDSDRYDFVKDIGSGNFGVARLMRDKL--TKELVAVKYIERGAA-----------------------------IDENVQR   65 (361)
T ss_dssp             CCTTTEEEEEEESSSTTSSEEEEEETT--TCCEEEEEEEESSTT-----------------------------SCHHHHH
T ss_pred             CCCCcEEEEEEeccCCCEEEEEEEECC--CCcEEEEEEEecCcc-----------------------------ccHHHHH
Confidence            446899999999999999999999998  788999999975321                             1234789


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHR  166 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~  166 (521)
                      |+.+++++     +||||+++++++.+++.+|+|||||.||+|.+++...+++++..++.++.||+.||.|||++||+||
T Consensus        66 E~~~l~~l-----~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~  140 (361)
T 3uc3_A           66 EIINHRSL-----RHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHR  140 (361)
T ss_dssp             HHHHHHHC-----CCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCSC
T ss_pred             HHHHHHhC-----CCCCCCcEEEEEeeCCEEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccC
Confidence            99999998     9999999999999999999999999999999999988899999999999999999999999999999


Q ss_pred             cCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCch-hhhHHHHHHHHHHHhCCCCCC
Q 009980          167 DLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSK-SDMWSLGVILYILLSGYPPFI  245 (521)
Q Consensus       167 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwslG~il~~ll~g~~pf~  245 (521)
                      ||||+||++.. +..+.+||+|||+|+...........+||+.|+|||++.+..++.+ +|||||||++|+|++|++||.
T Consensus       141 Dlkp~Nill~~-~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~  219 (361)
T 3uc3_A          141 DLKLENTLLDG-SPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFE  219 (361)
T ss_dssp             CCCGGGEEECS-SSSCCEEECCCCCC---------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             CCCHHHEEEcC-CCCceEEEeecCccccccccCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCC
Confidence            99999999922 2233599999999986544444456679999999999988887655 899999999999999999998


Q ss_pred             CCCc----HHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCC
Q 009980          246 AQSN----RQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDS  306 (521)
Q Consensus       246 ~~~~----~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~  306 (521)
                      +...    ......+......++.  ...+|+++++||.+||..||.+|||+.++++||||....
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~  282 (361)
T 3uc3_A          220 DPEEPRDYRKTIQRILSVKYSIPD--DIRISPECCHLISRIFVADPATRISIPEIKTHSWFLKNL  282 (361)
T ss_dssp             ----CCCHHHHHHHHHTTCCCCCT--TSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSHHHHTTC
T ss_pred             CCccHHHHHHHHHHHhcCCCCCCC--cCCCCHHHHHHHHHHccCChhHCcCHHHHHhCcchhcCC
Confidence            7544    3444555555554443  246899999999999999999999999999999997543

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=3.4e-52  Score=410.73  Aligned_cols=258  Identities=28%  Similarity=0.463  Sum_probs=230.6

Q ss_pred             ccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEI   88 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   88 (521)
                      .++|++.+.||+|+||.||+|+++.  +++.||||++++.....                         ......+.+|+
T Consensus         4 ~~~y~~~~~lG~G~fg~V~~~~~~~--~~~~vaiK~~~~~~~~~-------------------------~~~~~~~~~E~   56 (337)
T 1o6l_A            4 MNDFDYLKLLGKGTFGKVILVREKA--TGRYYAMKILRKEVIIA-------------------------KDEVAHTVTES   56 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETT--TCCEEEEEEEEHHHHHH-------------------------TTCHHHHHHHH
T ss_pred             hHHeEEEEEEecCCCeEEEEEEECC--CCCEEEEEEEeHHHhhh-------------------------hhHHHHHHHHH
Confidence            5799999999999999999999988  78999999997532110                         11234577899


Q ss_pred             HHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 009980           89 LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDL  168 (521)
Q Consensus        89 ~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dl  168 (521)
                      .+++.+     +||||+++++++.+.+.+|+||||++||+|.+++...+.+++..++.++.||+.||.|||++||+||||
T Consensus        57 ~~l~~l-----~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDl  131 (337)
T 1o6l_A           57 RVLQNT-----RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDI  131 (337)
T ss_dssp             HHHHSC-----CCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCC
T ss_pred             HHHHhC-----CCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcC
Confidence            999887     999999999999999999999999999999999998889999999999999999999999999999999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCccCC-CCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSSVEG-YTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQ  247 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~  247 (521)
                      ||+|||+   +.++.+||+|||+|+... ........+||+.|+|||++.+..|+.++|||||||++|+|++|.+||.+.
T Consensus       132 kp~NIll---~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~  208 (337)
T 1o6l_A          132 KLENLML---DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ  208 (337)
T ss_dssp             CGGGEEE---CTTSCEEECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             CHHHEEE---CCCCCEEEeeccchhhcccCCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCC
Confidence            9999999   778899999999998633 233445668999999999999999999999999999999999999999999


Q ss_pred             CcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCC-----CHHHHHcCCcccCC
Q 009980          248 SNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRP-----SAQELLNHPWVIGD  305 (521)
Q Consensus       248 ~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~-----t~~~~l~h~~~~~~  305 (521)
                      +.......+......++    ..+|+++++||.+||..||.+||     ++.++++||||.+.
T Consensus       209 ~~~~~~~~i~~~~~~~p----~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~f~~~  267 (337)
T 1o6l_A          209 DHERLFELILMEEIRFP----RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI  267 (337)
T ss_dssp             SHHHHHHHHHHCCCCCC----TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred             CHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCCcCCC
Confidence            88888888888877665    45899999999999999999999     99999999999764

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=2.9e-52  Score=413.94  Aligned_cols=262  Identities=25%  Similarity=0.420  Sum_probs=226.0

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      ..-.++|++.+.||+|+||.||+|+++.  +++.||||++++.....                         ......+.
T Consensus        19 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~--~~~~~AvK~~~~~~~~~-------------------------~~~~~~~~   71 (353)
T 3txo_A           19 RLGIDNFEFIRVLGKGSFGKVMLARVKE--TGDLYAVKVLKKDVILQ-------------------------DDDVECTM   71 (353)
T ss_dssp             ----CCEEEEEEEEEETTEEEEEEEETT--TCCEEEEEEEEHHHHHH-------------------------HTTHHHHH
T ss_pred             CCchhheEEEEEEeeCCCEEEEEEEEcC--CCCEEEEEEEEHHHhcc-------------------------hhHHHHHH
Confidence            3445789999999999999999999988  78999999997532110                         11234467


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      +|..++..+    .+||||+++++++.+.+.+|+|||||.||+|.+++...+.+++..++.++.||+.||.|||++||+|
T Consensus        72 ~E~~il~~~----~~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH  147 (353)
T 3txo_A           72 TEKRILSLA----RNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIY  147 (353)
T ss_dssp             HHHHHHHHT----TTCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBC
T ss_pred             HHHHHHHhc----cCCCceeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCcc
Confidence            788888776    3799999999999999999999999999999999999899999999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCCC-CCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCC
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGY-TDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF  244 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf  244 (521)
                      |||||+|||+   +.++.+||+|||+|+.... .......+||+.|+|||++.+..|+.++|||||||++|+|++|.+||
T Consensus       148 rDlkp~NILl---~~~g~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf  224 (353)
T 3txo_A          148 RDLKLDNVLL---DHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPF  224 (353)
T ss_dssp             CCCCGGGEEE---CTTSCEEECCCTTCBCSCC---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSS
T ss_pred             cCCCHHHEEE---CCCCCEEEccccceeecccCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCC
Confidence            9999999999   7888999999999986432 23345568999999999999889999999999999999999999999


Q ss_pred             CCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCH------HHHHcCCcccCC
Q 009980          245 IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSA------QELLNHPWVIGD  305 (521)
Q Consensus       245 ~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~------~~~l~h~~~~~~  305 (521)
                      .+.+..+....+..+...++    ..+++++++||.+||..||.+||++      .++++||||.+.
T Consensus       225 ~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~~  287 (353)
T 3txo_A          225 EAENEDDLFEAILNDEVVYP----TWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEI  287 (353)
T ss_dssp             CCSSHHHHHHHHHHCCCCCC----TTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTTC
T ss_pred             CCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCCcccCC
Confidence            99999999999999887766    3489999999999999999999999      999999999864

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=100.00  E-value=2.5e-52  Score=412.91  Aligned_cols=263  Identities=35%  Similarity=0.640  Sum_probs=230.4

Q ss_pred             cccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHH
Q 009980            4 ETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDAL   83 (521)
Q Consensus         4 ~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (521)
                      ....+.++|++.+.||+|+||.||+|+++.  +++.||||++.+...                                .
T Consensus        16 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~--~~~~~avK~~~~~~~--------------------------------~   61 (342)
T 2qr7_A           16 NSIQFTDGYEVKEDIGVGSYSVCKRCIHKA--TNMEFAVKIIDKSKR--------------------------------D   61 (342)
T ss_dssp             ---CHHHHEEEEEEEEECSSEEEEEEEETT--TTEEEEEEEEETTTC--------------------------------C
T ss_pred             cccCccccEEEEEEEeeCCCEEEEEEEECC--CCCEEEEEEEEcccC--------------------------------C
Confidence            445678999999999999999999999988  789999999975321                                1


Q ss_pred             HHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 009980           84 LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANI  163 (521)
Q Consensus        84 ~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i  163 (521)
                      ..+|+.++.++    .+||||+++++++.+++.+|+|||||.||+|.+++...+.+++..+..++.||+.||.|||++||
T Consensus        62 ~~~E~~~l~~~----~~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~gi  137 (342)
T 2qr7_A           62 PTEEIEILLRY----GQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGV  137 (342)
T ss_dssp             CHHHHHHHHHH----TTSTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             hHHHHHHHHHh----cCCCCcCeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            34688888776    47999999999999999999999999999999999998899999999999999999999999999


Q ss_pred             eeccCCCCcEEEeeCCC-CCCEEEeecCCCccCCCC-CCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCC
Q 009980          164 VHRDLKPENCLFLNDRE-DSPLKIMDFGLSSVEGYT-DPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGY  241 (521)
Q Consensus       164 ~H~dlkp~Nil~~~~~~-~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~  241 (521)
                      +||||||+|||+...+. .+.+||+|||+++..... ......+||+.|+|||++.+..|+.++|||||||++|+|++|.
T Consensus       138 vHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~  217 (342)
T 2qr7_A          138 VHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGY  217 (342)
T ss_dssp             ECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred             EeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCC
Confidence            99999999999844322 245999999999865332 2344568999999999998888999999999999999999999


Q ss_pred             CCCCC---CCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccC
Q 009980          242 PPFIA---QSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIG  304 (521)
Q Consensus       242 ~pf~~---~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~  304 (521)
                      +||.+   .+..++...+..+.+.++...|..+|+++++||.+||..||.+|||+.++++||||..
T Consensus       218 ~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~~~~  283 (342)
T 2qr7_A          218 TPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVH  283 (342)
T ss_dssp             CSSCSSTTSCHHHHHHHHHHCCCCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHT
T ss_pred             CCCCCCCcCCHHHHHHHHccCCcccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCeecC
Confidence            99976   4556778888899988888888999999999999999999999999999999999964

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=100.00  E-value=2.1e-51  Score=403.84  Aligned_cols=270  Identities=36%  Similarity=0.607  Sum_probs=241.8

Q ss_pred             ccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHH
Q 009980            5 TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALL   84 (521)
Q Consensus         5 ~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (521)
                      ...+.++|++.+.||+|+||.||+|+++.  +++.||||++.+......                      ........+
T Consensus         7 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~--~~~~vavK~~~~~~~~~~----------------------~~~~~~~~~   62 (321)
T 2a2a_A            7 QQKVEDFYDIGEELGSGQFAIVKKCREKS--TGLEYAAKFIKKRQSRAS----------------------RRGVSREEI   62 (321)
T ss_dssp             CSCHHHHEEEEEEEEECSSEEEEEEEETT--TCCEEEEEEEEBCSSSSC----------------------SSSBCHHHH
T ss_pred             chhhhccEEEeeEeeecCCEEEEEEEECC--CCeEEEEEEEeccccccc----------------------ccchhHHHH
Confidence            45678899999999999999999999987  788999999986543221                      111234568


Q ss_pred             HHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 009980           85 TNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIV  164 (521)
Q Consensus        85 ~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~  164 (521)
                      .+|+.+++++     .||||+++++++.+.+.+|+||||+.|++|.+++...+.+++..+..++.||+.||.|||++||+
T Consensus        63 ~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iv  137 (321)
T 2a2a_A           63 EREVSILRQV-----LHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIA  137 (321)
T ss_dssp             HHHHHHHHHC-----CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHhC-----CCCCcceEEEEEecCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            8999999998     99999999999999999999999999999999999888899999999999999999999999999


Q ss_pred             eccCCCCcEEEeeCCCCC----CEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhC
Q 009980          165 HRDLKPENCLFLNDREDS----PLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSG  240 (521)
Q Consensus       165 H~dlkp~Nil~~~~~~~~----~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g  240 (521)
                      ||||||+||++   +.++    .+||+|||++.............||+.|+|||++.+..++.++||||||+++|+|++|
T Consensus       138 H~dikp~NIl~---~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g  214 (321)
T 2a2a_A          138 HFDLKPENIML---LDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG  214 (321)
T ss_dssp             CCCCSGGGEEE---SCTTSSSCCEEECCCTTCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHS
T ss_pred             cCCCChHHEEE---ecCCCCcCCEEEccCccceecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHC
Confidence            99999999999   4444    7999999999876655455566799999999999988999999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCC
Q 009980          241 YPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDS  306 (521)
Q Consensus       241 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~  306 (521)
                      ..||.+.+..+....+......++...+..+|+.+++||.+||..||.+|||+.++++||||....
T Consensus       215 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp~~~~~~  280 (321)
T 2a2a_A          215 ASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVD  280 (321)
T ss_dssp             CCSSCCSSHHHHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHSTTTSCSS
T ss_pred             CCCCCCCCHHHHHHHHHhcccccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcCccccCCC
Confidence            999999998888999998888888777888999999999999999999999999999999997644

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=100.00  E-value=1.6e-51  Score=397.50  Aligned_cols=269  Identities=38%  Similarity=0.659  Sum_probs=242.5

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      ..+.++|++.+.||+|+||.||+|.++.  +++.||+|++.......                          .....+.
T Consensus         2 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~--~~~~vavK~~~~~~~~~--------------------------~~~~~~~   53 (284)
T 3kk8_A            2 TKFSDNYDVKEELGKGAFSVVRRCVHKT--TGLEFAAKIINTKKLSA--------------------------RDFQKLE   53 (284)
T ss_dssp             CTTTTTEEEEEEEEEETTEEEEEEEETT--TCCEEEEEEEEGGGCCH--------------------------HHHHHHH
T ss_pred             chhhhhhhhhhhhcCcCCeEEEEEEEcC--CCceEEEEEeecccCCH--------------------------HHHHHHH
Confidence            4678999999999999999999999988  78899999997533211                          1234578


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      +|+.+++++     +||||+++++++.+++..|+||||+.|++|.+.+...+.+++..+..++.|++.||.|||++||+|
T Consensus        54 ~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H  128 (284)
T 3kk8_A           54 REARICRKL-----QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVH  128 (284)
T ss_dssp             HHHHHHHHC-----CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             HHHHHHHHc-----CCCCcCeEEEEEEcCCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCc
Confidence            899999998     999999999999999999999999999999999998889999999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCC
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFI  245 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~  245 (521)
                      |||||+||++..+...+.+||+|||++.............||+.|+|||++.+..++.++||||+|+++|+|++|..||.
T Consensus       129 ~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~  208 (284)
T 3kk8_A          129 RNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFW  208 (284)
T ss_dssp             SCCCGGGEEESSSSTTCCEEECCCTTCEECCSSCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             CCCCHHHEEEecCCCCCcEEEeeceeeEEcccCccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCC
Confidence            99999999995544556699999999987665555556789999999999999999999999999999999999999999


Q ss_pred             CCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCCC
Q 009980          246 AQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSA  307 (521)
Q Consensus       246 ~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~~  307 (521)
                      +.+.......+..+...++.+.+..+++++.+||.+||..||.+|||+.++|+||||.....
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~  270 (284)
T 3kk8_A          209 DEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRER  270 (284)
T ss_dssp             CSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTSHHHHSCCC
T ss_pred             CCchhHHHHHHHhccccCCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcCccccCChh
Confidence            99999999999999888888888899999999999999999999999999999999986544

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=1.6e-51  Score=413.25  Aligned_cols=260  Identities=22%  Similarity=0.410  Sum_probs=225.5

Q ss_pred             cccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      -.++|++.+.||+|+||+||+|+++.  +++.||||++++......                         .....+..|
T Consensus        50 ~~~~y~~~~~LG~G~fG~V~~~~~~~--~~~~~AvK~~~k~~~~~~-------------------------~~~~~~~~E  102 (396)
T 4dc2_A           50 GLQDFDLLRVIGRGSYAKVLLVRLKK--TDRIYAMRVVKKELVNDD-------------------------EDIDWVQTE  102 (396)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETT--TTEEEEEEEEEGGGTC-----------------------------CCHHHHH
T ss_pred             ChhHcEEEEEEeeCCCeEEEEEEECC--CCCEEEEEEEEhhhccCH-------------------------HHHHHHHHH
Confidence            35789999999999999999999998  788999999987543221                         112346788


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecc
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRD  167 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~d  167 (521)
                      ..++.++    .+||||+++++++.+.+.+|+|||||.||+|.+++...+.+++..++.++.||+.||.|||++||+|||
T Consensus       103 ~~il~~~----~~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrD  178 (396)
T 4dc2_A          103 KHVFEQA----SNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRD  178 (396)
T ss_dssp             HHHHHHH----TTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCC
T ss_pred             HHHHHhc----CCCCCcCeeEEEEEECCEEEEEEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecc
Confidence            8888876    489999999999999999999999999999999999989999999999999999999999999999999


Q ss_pred             CCCCcEEEeeCCCCCCEEEeecCCCccC-CCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCC
Q 009980          168 LKPENCLFLNDREDSPLKIMDFGLSSVE-GYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIA  246 (521)
Q Consensus       168 lkp~Nil~~~~~~~~~~kl~Dfg~a~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~  246 (521)
                      |||+|||+   +.++.+||+|||+|+.. .........+||+.|+|||++.+..|+.++|||||||++|+|++|++||..
T Consensus       179 LKp~NILl---~~~g~ikL~DFGla~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~  255 (396)
T 4dc2_A          179 LKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI  255 (396)
T ss_dssp             CCGGGEEE---CTTSCEEECCCTTCBCCCCTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTT
T ss_pred             CCHHHEEE---CCCCCEEEeecceeeecccCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcc
Confidence            99999999   78899999999999863 333445667899999999999999999999999999999999999999964


Q ss_pred             C---------CcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCH------HHHHcCCcccCC
Q 009980          247 Q---------SNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSA------QELLNHPWVIGD  305 (521)
Q Consensus       247 ~---------~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~------~~~l~h~~~~~~  305 (521)
                      .         ........+......++    ..+|+++++||.+||+.||.+||++      +++++||||.+-
T Consensus       256 ~~~~~~~~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~i  325 (396)
T 4dc2_A          256 VGSSDNPDQNTEDYLFQVILEKQIRIP----RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV  325 (396)
T ss_dssp             TTC------CCHHHHHHHHHHCCCCCC----TTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTTC
T ss_pred             cccccccchhhHHHHHHHHhccccCCC----CcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccCC
Confidence            3         22345666777766655    4589999999999999999999985      899999999764

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=100.00  E-value=1.4e-51  Score=396.35  Aligned_cols=267  Identities=36%  Similarity=0.666  Sum_probs=240.3

Q ss_pred             CccccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccH
Q 009980            2 GQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSD   81 (521)
Q Consensus         2 ~~~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (521)
                      |.+...+.++|++.+.||+|+||.||+|.++.  ++..||+|.+.+...                            ...
T Consensus         1 Gs~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~--~~~~~a~k~~~~~~~----------------------------~~~   50 (277)
T 3f3z_A            1 GSTKGDINQYYTLENTIGRGSWGEVKIAVQKG--TRIRRAAKKIPKYFV----------------------------EDV   50 (277)
T ss_dssp             -----CHHHHEEEEEEEEEETTEEEEEEEETT--TCCEEEEEEEEGGGC----------------------------SCH
T ss_pred             CcchhhhhhhEEeeeEEeecCCEEEEEEEeCC--CCcEEEEEeehhhcc----------------------------chH
Confidence            45677889999999999999999999999987  788999999875322                            123


Q ss_pred             HHHHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Q 009980           82 ALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQA  161 (521)
Q Consensus        82 ~~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~  161 (521)
                      ..+.+|+.+++++     +||||+++++++.+.+..|+||||+.|++|.+++...+.+++..+..++.|++.||.|||++
T Consensus        51 ~~~~~E~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~  125 (277)
T 3f3z_A           51 DRFKQEIEIMKSL-----DHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKL  125 (277)
T ss_dssp             HHHHHHHHHHHTC-----CCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHhC-----CCCCEeeEEEEEecCCeEEEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            5688999999998     99999999999999999999999999999999999888999999999999999999999999


Q ss_pred             CCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCC
Q 009980          162 NIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGY  241 (521)
Q Consensus       162 ~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~  241 (521)
                      ||+||||||+||++..++.++.+||+|||++.............||+.|+|||++.+ .++.++||||||+++|+|++|.
T Consensus       126 ~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~  204 (277)
T 3f3z_A          126 NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGY  204 (277)
T ss_dssp             TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSS
T ss_pred             CccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccchhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCC
Confidence            999999999999997666778999999999987665555566789999999999865 4899999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccC
Q 009980          242 PPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIG  304 (521)
Q Consensus       242 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~  304 (521)
                      .||.+.+..+....+..+...++...+..+|+.+.+||.+||..||.+|||+.++|+||||+.
T Consensus       205 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~  267 (277)
T 3f3z_A          205 PPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEK  267 (277)
T ss_dssp             CSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHH
T ss_pred             CCCCCCCHHHHHHHHHhCCCCCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhc
Confidence            999999999999999999999888888899999999999999999999999999999999964

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=8.9e-51  Score=394.63  Aligned_cols=261  Identities=26%  Similarity=0.434  Sum_probs=226.4

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      ....++|++.+.||+|+||+||+|++..  +++.||||++.....                            .....+.
T Consensus        16 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~--~~~~vaiK~~~~~~~----------------------------~~~~~~~   65 (297)
T 3fxz_A           16 GDPKKKYTRFEKIGQGASGTVYTAMDVA--TGQEVAIRQMNLQQQ----------------------------PKKELII   65 (297)
T ss_dssp             SCGGGTBCCCEEEEEETTEEEEEEEBTT--TCCEEEEEEEEGGGC----------------------------SCHHHHH
T ss_pred             CChhhceeeeeeeccCCCeEEEEEEECC--CCcEEEEEEeecccc----------------------------cHHHHHH
Confidence            4567899999999999999999999987  788999999875322                            1245578


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      +|+.+++++     +||||+++++++..++.+|+|||||.||+|.+++... .+++..+..++.|++.||.|||++||+|
T Consensus        66 ~E~~~l~~l-----~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H  139 (297)
T 3fxz_A           66 NEILVMREN-----KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVIH  139 (297)
T ss_dssp             HHHHHHHHC-----CCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             HHHHHHhcC-----CCCCCCeEeEEEEECCEEEEEEECCCCCCHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCcee
Confidence            999999998     9999999999999999999999999999999988764 6999999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC-CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCC
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF  244 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf  244 (521)
                      |||||+|||+   +.++.+||+|||+|....... .....+||+.|+|||++.+..++.++||||+||++|+|++|..||
T Consensus       140 ~Dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf  216 (297)
T 3fxz_A          140 RDIKSDNILL---GMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY  216 (297)
T ss_dssp             CCCSGGGEEE---CTTCCEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred             CCCCHHHEEE---CCCCCEEEeeCCCceecCCcccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence            9999999999   778899999999997654332 234567999999999999999999999999999999999999999


Q ss_pred             CCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCC
Q 009980          245 IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDS  306 (521)
Q Consensus       245 ~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~  306 (521)
                      .+.+.......+....... ...+..+|+.+++||.+||..||.+|||+.++|+||||+...
T Consensus       217 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~  277 (297)
T 3fxz_A          217 LNENPLRALYLIATNGTPE-LQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAK  277 (297)
T ss_dssp             TTSCHHHHHHHHHHHCSCC-CSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred             CCCCHHHHHHHHHhCCCCC-CCCccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhcccC
Confidence            8887766665554433221 122366899999999999999999999999999999998543

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=100.00  E-value=1.4e-51  Score=405.25  Aligned_cols=264  Identities=36%  Similarity=0.660  Sum_probs=213.6

Q ss_pred             ccccceeec---ccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHH
Q 009980            7 KLTDEYEVT---DILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDAL   83 (521)
Q Consensus         7 ~~~~~Y~~~---~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (521)
                      .+.++|++.   +.||+|+||.||+|+++.  +++.||||++.+.                               ....
T Consensus         5 ~f~~~y~~~~~~~~lG~G~~g~V~~~~~~~--~~~~vavK~~~~~-------------------------------~~~~   51 (325)
T 3kn6_A            5 PFYQHYDLDLKDKPLGEGSFSICRKCVHKK--SNQAFAVKIISKR-------------------------------MEAN   51 (325)
T ss_dssp             HHHHHEEECTTSCCSEEETTEEEEEEEETT--TCCEEEEEEEEGG-------------------------------GHHH
T ss_pred             cchhccccccCCCccccCCCeEEEEEEECC--CCCEEEEEEEChh-------------------------------hhhh
Confidence            456789886   789999999999999988  7889999998642                               2345


Q ss_pred             HHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 009980           84 LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANI  163 (521)
Q Consensus        84 ~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i  163 (521)
                      ..+|+.+++++    .+||||+++++++.++...|+|||||.||+|.+++...+.+++.++..++.||+.||.|||++||
T Consensus        52 ~~~e~~~l~~l----~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i  127 (325)
T 3kn6_A           52 TQKEITALKLC----EGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGV  127 (325)
T ss_dssp             HHHHHHHHHHT----TTCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHHHh----cCCCCeeEEEEEEEcCCEEEEEEEccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence            77899999988    24999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCC-CCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCC
Q 009980          164 VHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYT-DPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYP  242 (521)
Q Consensus       164 ~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~  242 (521)
                      +||||||+||++..++....+||+|||+++..... ......+||+.|+|||++.+..|+.++|||||||++|+|++|.+
T Consensus       128 vH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~  207 (325)
T 3kn6_A          128 VHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQV  207 (325)
T ss_dssp             ECCCCCGGGEEEEC----CEEEECCCTTCEECCC----------------------CCCCHHHHHHHHHHHHHHHHHSSC
T ss_pred             eecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCC
Confidence            99999999999965444458999999999865432 23345678999999999999999999999999999999999999


Q ss_pred             CCCCCC-------cHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCCC
Q 009980          243 PFIAQS-------NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSA  307 (521)
Q Consensus       243 pf~~~~-------~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~~  307 (521)
                      ||.+.+       ..+....+..+.+.++...|..+|+++++||.+||..||.+|||+.++++||||+....
T Consensus       208 pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~~~~~  279 (325)
T 3kn6_A          208 PFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQ  279 (325)
T ss_dssp             TTC-------CCCHHHHHHHHTTTCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGGCTTCC
T ss_pred             CCCCCccccccccHHHHHHHHHcCCCCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChhhccCcc
Confidence            997644       34677888888888888889999999999999999999999999999999999986543

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=100.00  E-value=1.9e-51  Score=412.72  Aligned_cols=265  Identities=34%  Similarity=0.618  Sum_probs=236.9

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      ..+.++|++.+.||+|+||.||+|.++.  +++.||+|++.....                            .....+.
T Consensus        47 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~--~~~~~a~K~~~~~~~----------------------------~~~~~~~   96 (387)
T 1kob_A           47 GSVYDYYDILEELGSGAFGVVHRCVEKA--TGRVFVAKFINTPYP----------------------------LDKYTVK   96 (387)
T ss_dssp             SCGGGTEEEEEEEEEETTEEEEEEEETT--TCCEEEEEEEECCSH----------------------------HHHHHHH
T ss_pred             CccccceEEEEEEecCCCEEEEEEEECC--CCCEEEEEEecccch----------------------------hhHHHHH
Confidence            3567899999999999999999999988  788999999864211                            2234588


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE-RYMEVGAAAVIRQIAEGLAALHQANIV  164 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qil~al~~lH~~~i~  164 (521)
                      +|+.+++++     +||||+++++++.+...+|+|||||.||+|.+++.... .+++..+..++.||+.||.|||++||+
T Consensus        97 ~E~~il~~l-----~hpnIv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~giv  171 (387)
T 1kob_A           97 NEISIMNQL-----HHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIV  171 (387)
T ss_dssp             HHHHHHTTC-----CSTTBCCEEEEEECSSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHhC-----CCcCCCeEEEEEEeCCEEEEEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            999999988     99999999999999999999999999999999987654 799999999999999999999999999


Q ss_pred             eccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCC
Q 009980          165 HRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF  244 (521)
Q Consensus       165 H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf  244 (521)
                      ||||||+|||+.. +..+.+||+|||+|+...........+||+.|+|||++.+..++.++|||||||++|+|++|.+||
T Consensus       172 HrDlkp~NIll~~-~~~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf  250 (387)
T 1kob_A          172 HLDIKPENIMCET-KKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPF  250 (387)
T ss_dssp             CCCCCGGGEEESS-TTCCCEEECCCTTCEECCTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSS
T ss_pred             ecccchHHeEEec-CCCCceEEEecccceecCCCcceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCC
Confidence            9999999999932 235679999999998766555555668999999999999999999999999999999999999999


Q ss_pred             CCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCC
Q 009980          245 IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDS  306 (521)
Q Consensus       245 ~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~  306 (521)
                      .+.+..+....+......++...+..+|+++++||.+||..||.+|||+.++|+||||.+..
T Consensus       251 ~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  312 (387)
T 1kob_A          251 AGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDH  312 (387)
T ss_dssp             CCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSCC
T ss_pred             CCCCHHHHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCccccCCc
Confidence            99988888888988888887777888999999999999999999999999999999998654

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=1.3e-51  Score=407.68  Aligned_cols=263  Identities=25%  Similarity=0.409  Sum_probs=230.1

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      ..-.++|++.+.||+|+||.||+|+++.  +++.||||++++.....                         ......+.
T Consensus        13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~--~~~~vaiK~~~~~~~~~-------------------------~~~~~~~~   65 (345)
T 1xjd_A           13 KLKIEDFILHKMLGKGSFGKVFLAEFKK--TNQFFAIKALKKDVVLM-------------------------DDDVECTM   65 (345)
T ss_dssp             ---CTTEEEEEEEEECSSSEEEEEEETT--TTEEEEEEEEEHHHHHH-------------------------TTCHHHHH
T ss_pred             CCChHHeEEEEEEeeCCCeEEEEEEECC--CCCEEEEEEEEhHHhhh-------------------------hhhHHHHH
Confidence            3456899999999999999999999988  78999999997632110                         01234467


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      .|..++..+    .+||||+++++++.+.+.+|+|||||.||+|.+++...+.+++..+..++.||+.||.|||++||+|
T Consensus        66 ~E~~il~~~----~~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH  141 (345)
T 1xjd_A           66 VEKRVLSLA----WEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVY  141 (345)
T ss_dssp             HHHHHHHHH----TTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBC
T ss_pred             HHHHHHHhc----CCCCCCCcEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence            788888765    3899999999999999999999999999999999998889999999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCCC-CCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCC
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGY-TDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF  244 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf  244 (521)
                      |||||+|||+   +.++.+||+|||+|+.... .......+||+.|+|||++.+..|+.++|||||||++|+|++|.+||
T Consensus       142 rDlkp~NIll---~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf  218 (345)
T 1xjd_A          142 RDLKLDNILL---DKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF  218 (345)
T ss_dssp             CCCCGGGEEE---CTTSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred             CCCChhhEEE---CCCCCEEEeEChhhhhcccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCC
Confidence            9999999999   7788999999999986432 23345668999999999999999999999999999999999999999


Q ss_pred             CCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHH-HHHcCCcccCCC
Q 009980          245 IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQ-ELLNHPWVIGDS  306 (521)
Q Consensus       245 ~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~-~~l~h~~~~~~~  306 (521)
                      .+.+..+....+..+...++    ..+|+++++||.+||..||.+|||+. ++++||||.+..
T Consensus       219 ~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~hp~f~~~~  277 (345)
T 1xjd_A          219 HGQDEEELFHSIRMDNPFYP----RWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREIN  277 (345)
T ss_dssp             CCSSHHHHHHHHHHCCCCCC----TTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTTCC
T ss_pred             CCCCHHHHHHHHHhCCCCCC----cccCHHHHHHHHHHhcCCHhHcCCChHHHHcCccccCCC
Confidence            99999999998888876655    45899999999999999999999998 999999998644

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=1.8e-51  Score=402.59  Aligned_cols=257  Identities=27%  Similarity=0.498  Sum_probs=230.1

Q ss_pred             cccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      -.++|++.+.||+|+||.||+|+++.  +++.||+|++.+.....                         ......+.+|
T Consensus         4 ~~~~y~~~~~lG~G~~g~V~~~~~~~--~~~~~aiK~~~~~~~~~-------------------------~~~~~~~~~E   56 (318)
T 1fot_A            4 SLQDFQILRTLGTGSFGRVHLIRSRH--NGRYYAMKVLKKEIVVR-------------------------LKQVEHTNDE   56 (318)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETT--TCCEEEEEEEEHHHHHH-------------------------TTCHHHHHHH
T ss_pred             ChHHcEEEEEEeeCCCEEEEEEEECC--CCCEEEEEEEEHHHhhh-------------------------hhHHHHHHHH
Confidence            35789999999999999999999988  78999999997532110                         0123456789


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecc
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRD  167 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~d  167 (521)
                      +.+++.+     +||||+++++++.+.+.+|+||||+.||+|.+++...+.+++..++.++.||+.||.|||++||+|||
T Consensus        57 ~~~l~~l-----~hp~Iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrD  131 (318)
T 1fot_A           57 RLMLSIV-----THPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRD  131 (318)
T ss_dssp             HHHHHSC-----CBTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCC
T ss_pred             HHHHhhC-----CCCCCceEeEEEEeCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence            9988887     99999999999999999999999999999999999988999999999999999999999999999999


Q ss_pred             CCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 009980          168 LKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQ  247 (521)
Q Consensus       168 lkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~  247 (521)
                      |||+|||+   +.++.+||+|||+|+....  .....+||+.|+|||++.+..|+.++|||||||++|+|++|.+||.+.
T Consensus       132 lkp~NIll---~~~g~~kL~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~  206 (318)
T 1fot_A          132 LKPENILL---DKNGHIKITDFGFAKYVPD--VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDS  206 (318)
T ss_dssp             CCGGGEEE---CTTSCEEECCCSSCEECSS--CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred             CChheEEE---cCCCCEEEeecCcceecCC--ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCC
Confidence            99999999   7788999999999986542  234568999999999999999999999999999999999999999999


Q ss_pred             CcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCC-----CHHHHHcCCcccCC
Q 009980          248 SNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRP-----SAQELLNHPWVIGD  305 (521)
Q Consensus       248 ~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~-----t~~~~l~h~~~~~~  305 (521)
                      +..+....+..+...++    ..++++++++|.+||..||.+||     +++++++||||.+.
T Consensus       207 ~~~~~~~~i~~~~~~~p----~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~f~~~  265 (318)
T 1fot_A          207 NTMKTYEKILNAELRFP----PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEV  265 (318)
T ss_dssp             SHHHHHHHHHHCCCCCC----TTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSC
T ss_pred             CHHHHHHHHHhCCCCCC----CCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCccccCC
Confidence            98888899988877665    45899999999999999999999     99999999999864

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=100.00  E-value=2.3e-52  Score=411.46  Aligned_cols=261  Identities=30%  Similarity=0.495  Sum_probs=226.6

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      ....++|++.+.||+|+||.||+|++..  +++.||||++.+.....                         ......+.
T Consensus         5 ~~~i~~Y~i~~~lG~G~~g~V~~a~~~~--~~~~vaiK~~~~~~~~~-------------------------~~~~~~~~   57 (336)
T 3h4j_B            5 KRHIGPYIIRETLGEGSFGKVKLATHYK--TQQKVALKFISRQLLKK-------------------------SDMHMRVE   57 (336)
T ss_dssp             CSEETTEEEEEEEEEETTEEEEEEEETT--TCCEEEEEEEEHHHHHH-------------------------TTCSHHHH
T ss_pred             ccccCCEEEEEEEecCCCeEEEEEEECC--CCCEEEEEEEehHHccc-------------------------hhHHHHHH
Confidence            4567899999999999999999999987  78899999997532111                         01124578


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      +|+.+++.+     +||||+++++++.+++.+|+||||+ +|+|.+++...+.+++.+++.++.||+.||.|||++||+|
T Consensus        58 ~E~~~l~~l-----~hpnIv~l~~~~~~~~~~~lv~E~~-~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH  131 (336)
T 3h4j_B           58 REISYLKLL-----RHPHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVH  131 (336)
T ss_dssp             HHHHHHTTC-----CCTTBCCEEEEEECSSEEEEEECCC-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred             HHHHHHHhC-----CCCCCCeEEEEEEeCCEEEEEEECC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence            999999988     9999999999999999999999999 7899999998899999999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCC-CchhhhHHHHHHHHHHHhCCCCC
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRI-TSKSDMWSLGVILYILLSGYPPF  244 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~~ll~g~~pf  244 (521)
                      |||||+|||+   +.++.+||+|||+|............+||+.|+|||++.+..+ ++++|||||||++|+|++|.+||
T Consensus       132 ~Dlkp~NIll---~~~~~~kl~DFG~s~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf  208 (336)
T 3h4j_B          132 RDLKPENLLL---DDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPF  208 (336)
T ss_dssp             CCCSTTTEEE---CTTCCEEECCSSCTBTTTTSBTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSS
T ss_pred             cCCchhhEEE---cCCCCEEEEEeccceeccCCcccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCC
Confidence            9999999999   7788999999999987766655667789999999999988776 78999999999999999999999


Q ss_pred             CCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCC
Q 009980          245 IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDS  306 (521)
Q Consensus       245 ~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~  306 (521)
                      .+.........+..+....+    ..+|+++++||.+||..||.+|||+.++++||||+...
T Consensus       209 ~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~~  266 (336)
T 3h4j_B          209 DDEFIPNLFKKVNSCVYVMP----DFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNVNL  266 (336)
T ss_dssp             BCSSSTTCBCCCCSSCCCCC----TTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCHHHHTTC
T ss_pred             CCccHHHHHHHHHcCCCCCc----ccCCHHHHHHHHHHcCCChhHCcCHHHHHhChhhccCC
Confidence            88766555444444443333    45899999999999999999999999999999997643

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=6.6e-51  Score=403.30  Aligned_cols=263  Identities=22%  Similarity=0.403  Sum_probs=226.3

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      ..-.++|++.+.||+|+||.||+|+++.  +++.||||++.+.....                         ......+.
T Consensus         5 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~--~~~~~aiK~~~~~~~~~-------------------------~~~~~~~~   57 (345)
T 3a8x_A            5 PLGLQDFDLLRVIGRGSYAKVLLVRLKK--TDRIYAMKVVKKELVND-------------------------DEDIDWVQ   57 (345)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEETT--TTEEEEEEEEEGGGSCS-------------------------HHHHHHHH
T ss_pred             CCchhheEEEEEEEecCCeEEEEEEECC--CCCEEEEEEEEhHHhcc-------------------------hHHHHHHH
Confidence            3456899999999999999999999988  78999999998643221                         11234467


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      +|..++.++    .+||||+++++++.+.+.+|+||||+.||+|.+++...+.+++..++.++.||+.||.|||++||+|
T Consensus        58 ~E~~~l~~~----~~hp~iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH  133 (345)
T 3a8x_A           58 TEKHVFEQA----SNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIY  133 (345)
T ss_dssp             HHHHHHHHT----TTCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBC
T ss_pred             HHHHHHHhc----CCCCccCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Confidence            788888775    4899999999999999999999999999999999998889999999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCC-CCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCC
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEG-YTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF  244 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf  244 (521)
                      |||||+|||+   +.++.+||+|||+|+... ........+||+.|+|||++.+..|+.++|||||||++|+|++|.+||
T Consensus       134 rDlkp~NIll---~~~g~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf  210 (345)
T 3a8x_A          134 RDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF  210 (345)
T ss_dssp             CCCCGGGEEE---CTTSCEEECCGGGCBCSCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred             cCCCHHHEEE---CCCCCEEEEeccccccccCCCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCc
Confidence            9999999999   778899999999998632 233445668999999999999999999999999999999999999999


Q ss_pred             CC---------CCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCH------HHHHcCCcccCCC
Q 009980          245 IA---------QSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSA------QELLNHPWVIGDS  306 (521)
Q Consensus       245 ~~---------~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~------~~~l~h~~~~~~~  306 (521)
                      ..         .........+......++    ..+|+++++||.+||..||.+|||+      .++++||||.+..
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~~~  283 (345)
T 3a8x_A          211 DIVGSSDNPDQNTEDYLFQVILEKQIRIP----RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVD  283 (345)
T ss_dssp             TTTTC-------CHHHHHHHHHHCCCCCC----TTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTTCC
T ss_pred             CCcccccccccccHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCCCC
Confidence            75         233445666777666554    4589999999999999999999995      8999999997643

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=5.2e-51  Score=398.69  Aligned_cols=274  Identities=27%  Similarity=0.383  Sum_probs=220.2

Q ss_pred             CccccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccH
Q 009980            2 GQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSD   81 (521)
Q Consensus         2 ~~~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (521)
                      |+.+..+.++|++.+.||+|+||+||+|+++.  +++.||||++.........                       ....
T Consensus         1 Gp~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~--~~~~vavK~~~~~~~~~~~-----------------------~~~~   55 (308)
T 3g33_A            1 GPLGSMATSRYEPVAEIGVGAYGTVYKARDPH--SGHFVALKSVRVPNGGGGG-----------------------GGLP   55 (308)
T ss_dssp             ---------CCEEEEEECCSSSCCEEEEECTT--TCCEEEEEEEEEECCCTTS-----------------------SCCC
T ss_pred             CCCCcccccceEEEEEEecCCCeEEEEEEECC--CCcEEEEEEEecccccccc-----------------------cccc
Confidence            55677889999999999999999999999987  7899999999754322110                       0112


Q ss_pred             HHHHHHHHHHHHHhhccCCCCCccceeEEEEeCC-----eEEEEEeccCCCchHHHHHhcCC--CCHHHHHHHHHHHHHH
Q 009980           82 ALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQN-----GVHLILELCSGGELFDRIVAQER--YMEVGAAAVIRQIAEG  154 (521)
Q Consensus        82 ~~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~-----~~~lv~e~~~gg~L~~~l~~~~~--~~~~~~~~i~~qil~a  154 (521)
                      ....+|+.+++++...  .||||+++++++....     .+++||||+.| +|.+++.....  +++..++.++.||+.|
T Consensus        56 ~~~~~e~~~l~~l~~~--~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~i~~qi~~a  132 (308)
T 3g33_A           56 ISTVREVALLRRLEAF--EHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRG  132 (308)
T ss_dssp             HHHHHHHHHHHHHHHH--CCTTBCCEEEEEEECCSSSEEEEEEEEECCCC-BHHHHHHTCCTTCSCHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHhhc--CCCCeEEeeeeeeccCCCCceeEEEEehhhhc-CHHHHHhhccCCCCCHHHHHHHHHHHHHH
Confidence            3466788888776211  5999999999998765     58999999975 99999987654  9999999999999999


Q ss_pred             HHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHH
Q 009980          155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVIL  234 (521)
Q Consensus       155 l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il  234 (521)
                      |.|||++||+||||||+||++   +.++.+||+|||+|+...........+||+.|+|||++.+..++.++|||||||++
T Consensus       133 l~~lH~~~ivH~Dlkp~Nil~---~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il  209 (308)
T 3g33_A          133 LDFLHANCIVHRDLKPENILV---TSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIF  209 (308)
T ss_dssp             HHHHHHTTCCCSCCCTTTEEE---CTTSCEEECSCSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHH
T ss_pred             HHHHHHCCcccCCCCHHHEEE---cCCCCEEEeeCccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHH
Confidence            999999999999999999999   77889999999999877655556667899999999999999999999999999999


Q ss_pred             HHHHhCCCCCCCCCcHHHHHHHHcCCCCCc-----------------------hhhhhccCHHHHHHHHHhccCCCCCCC
Q 009980          235 YILLSGYPPFIAQSNRQKQQMIMAGEFSFY-----------------------EQTWKNISSSAKQLISSLLTVDPNRRP  291 (521)
Q Consensus       235 ~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~-----------------------~~~~~~~s~~~~~li~~~l~~dp~~R~  291 (521)
                      |+|++|.+||.+.+..+....+.......+                       ...++.+++.+.+||.+||..||.+||
T Consensus       210 ~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~  289 (308)
T 3g33_A          210 AEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRI  289 (308)
T ss_dssp             HHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSC
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCC
Confidence            999999999999888877776654321111                       112346889999999999999999999


Q ss_pred             CHHHHHcCCcccCCC
Q 009980          292 SAQELLNHPWVIGDS  306 (521)
Q Consensus       292 t~~~~l~h~~~~~~~  306 (521)
                      |+.++|+||||+...
T Consensus       290 t~~e~l~h~~~~~~~  304 (308)
T 3g33_A          290 SAFRALQHSYLHKDE  304 (308)
T ss_dssp             CHHHHHTSTTC----
T ss_pred             CHHHHhcCccccCCC
Confidence            999999999998654

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=100.00  E-value=2.9e-51  Score=406.44  Aligned_cols=262  Identities=24%  Similarity=0.383  Sum_probs=228.3

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      ..-.++|++.+.||+|+||.||+|+++.  +++.||||++.+.....                         ......+.
T Consensus        16 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~--~~~~~AiK~~~~~~~~~-------------------------~~~~~~~~   68 (353)
T 2i0e_A           16 RMKLTDFNFLMVLGKGSFGKVMLSERKG--TDELYAVKILKKDVVIQ-------------------------DDDVECTM   68 (353)
T ss_dssp             ---CTTEEEEEEEEEETTEEEEEEEETT--EEEEEEEEEEEHHHHHH-------------------------TTCHHHHH
T ss_pred             CCchHHcEEEEEEeeCCCEEEEEEEECC--CCCEEEEEEEEHHHhhc-------------------------chHHHHHH
Confidence            3456899999999999999999999987  78999999997632110                         01223456


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      .|..++..+    .+||||+++++++.+.+.+|+||||++||+|.+++...+.+++..++.++.||+.||.|||++||+|
T Consensus        69 ~E~~~l~~~----~~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH  144 (353)
T 2i0e_A           69 VEKRVLALP----GKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIY  144 (353)
T ss_dssp             HHHHHHTCT----TCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBC
T ss_pred             HHHHHHHhc----CCCCEEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEe
Confidence            677766554    4899999999999999999999999999999999998889999999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCC-CCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCC
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEG-YTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF  244 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf  244 (521)
                      |||||+|||+   +.++.+||+|||+|+... ........+||+.|+|||++.+..|+.++|||||||++|+|++|.+||
T Consensus       145 rDlkp~NIll---~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf  221 (353)
T 2i0e_A          145 RDLKLDNVML---DSEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPF  221 (353)
T ss_dssp             CCCCGGGEEE---CTTSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSS
T ss_pred             ccCCHHHEEE---cCCCcEEEEeCCcccccccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCC
Confidence            9999999999   788899999999998643 223345668999999999999999999999999999999999999999


Q ss_pred             CCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCC-----HHHHHcCCcccCC
Q 009980          245 IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPS-----AQELLNHPWVIGD  305 (521)
Q Consensus       245 ~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t-----~~~~l~h~~~~~~  305 (521)
                      .+.+..+....+......++    ..+|+++++||.+||..||.+||+     ++++++||||...
T Consensus       222 ~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~~  283 (353)
T 2i0e_A          222 EGEDEDELFQSIMEHNVAYP----KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI  283 (353)
T ss_dssp             CCSSHHHHHHHHHHCCCCCC----TTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSGGGTTC
T ss_pred             CCCCHHHHHHHHHhCCCCCC----CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCccccCC
Confidence            99999999999998877765    468999999999999999999994     6999999999754

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=100.00  E-value=8.7e-51  Score=398.56  Aligned_cols=267  Identities=34%  Similarity=0.624  Sum_probs=224.5

Q ss_pred             cccccceeec-ccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHH
Q 009980            6 RKLTDEYEVT-DILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALL   84 (521)
Q Consensus         6 ~~~~~~Y~~~-~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (521)
                      ..+.++|++. +.||+|+||.||+|+++.  +++.||||++.+...                            .....+
T Consensus         8 ~~~~~~y~i~~~~lg~G~~g~V~~~~~~~--~~~~vavK~~~~~~~----------------------------~~~~~~   57 (316)
T 2ac3_A            8 GRFEDVYQLQEDVLGEGAHARVQTCINLI--TSQEYAVKIIEKQPG----------------------------HIRSRV   57 (316)
T ss_dssp             CCTTTSCEECCCCCCCCSSEEEEEEECSS--SCCEEEEEEEECCSS----------------------------CCHHHH
T ss_pred             cccceeEEecCceecCCceEEEEEEEEcC--CCcEEEEEEEeeCcc----------------------------hhHHHH
Confidence            4678899995 789999999999999987  788999999975321                            124567


Q ss_pred             HHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 009980           85 TNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIV  164 (521)
Q Consensus        85 ~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~  164 (521)
                      .+|+.++.++    .+||||+++++++.+++.+|+||||+.|++|.+++...+.+++..+..++.||+.||.|||++||+
T Consensus        58 ~~E~~~l~~~----~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iv  133 (316)
T 2ac3_A           58 FREVEMLYQC----QGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIA  133 (316)
T ss_dssp             HHHHHHHHHT----CCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHh----cCCCCeeeEEEEEeeCCEEEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCce
Confidence            8999999885    379999999999999999999999999999999999888999999999999999999999999999


Q ss_pred             eccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC--------CcccccCCccccccccccc-----CCCCchhhhHHHH
Q 009980          165 HRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD--------PVVGLFGSIDYVSPEALLQ-----DRITSKSDMWSLG  231 (521)
Q Consensus       165 H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwslG  231 (521)
                      ||||||+||++..++....+||+|||++.......        .....+||+.|+|||++.+     ..++.++||||||
T Consensus       134 H~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG  213 (316)
T 2ac3_A          134 HRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLG  213 (316)
T ss_dssp             CCCCCGGGEEESCSSSSCSEEECCTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHH
T ss_pred             eCCCCHHHEEEccCCCcCceEEEEccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHH
Confidence            99999999999443334459999999987543211        1223469999999999875     4588999999999


Q ss_pred             HHHHHHHhCCCCCCCCCc---------------HHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHH
Q 009980          232 VILYILLSGYPPFIAQSN---------------RQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL  296 (521)
Q Consensus       232 ~il~~ll~g~~pf~~~~~---------------~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~  296 (521)
                      |++|+|++|.+||.+...               ......+..+...++...+..+|+.+++||.+||..||.+|||+.++
T Consensus       214 ~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~  293 (316)
T 2ac3_A          214 VILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQV  293 (316)
T ss_dssp             HHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred             HHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHH
Confidence            999999999999977642               34567788888888887788899999999999999999999999999


Q ss_pred             HcCCcccCCC
Q 009980          297 LNHPWVIGDS  306 (521)
Q Consensus       297 l~h~~~~~~~  306 (521)
                      |+||||++..
T Consensus       294 l~hp~~~~~~  303 (316)
T 2ac3_A          294 LQHPWVQGCA  303 (316)
T ss_dssp             HHSTTCC---
T ss_pred             hcChhhcCCC
Confidence            9999998643

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=5.1e-51  Score=404.67  Aligned_cols=259  Identities=28%  Similarity=0.467  Sum_probs=231.9

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      ....++|++.+.||+|+||.||+|+++.  +++.||||++.+.....                         ......+.
T Consensus        37 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~--~~~~~aiK~~~~~~~~~-------------------------~~~~~~~~   89 (350)
T 1rdq_E           37 TAQLDQFDRIKTLGTGSFGRVMLVKHKE--SGNHYAMKILDKQKVVK-------------------------LKQIEHTL   89 (350)
T ss_dssp             CCCGGGEEEEEEEEECSSCEEEEEEETT--TCCEEEEEEEEHHHHHH-------------------------TTCHHHHH
T ss_pred             CCCHHHCEEEEEeecCcCcEEEEEEECC--CCCEEEEEEEEhHHhcc-------------------------HHHHHHHH
Confidence            3456899999999999999999999988  78899999997532211                         01234577


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      +|+.+++++     +||||+++++++.+.+.+|+||||+.||+|.+++...+.+++..++.++.||+.||.|||++||+|
T Consensus        90 ~E~~~l~~l-----~hp~iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH  164 (350)
T 1rdq_E           90 NEKRILQAV-----NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIY  164 (350)
T ss_dssp             HHHHHHTTC-----CCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             HHHHHHHhC-----CCCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence            899999887     999999999999999999999999999999999998889999999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCC
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFI  245 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~  245 (521)
                      |||||+|||+   +.++.+||+|||+++....  .....+||+.|+|||++.+..++.++|||||||++|+|++|.+||.
T Consensus       165 rDlkp~NIll---~~~g~~kL~DFg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~  239 (350)
T 1rdq_E          165 RDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF  239 (350)
T ss_dssp             CCCSGGGEEE---CTTSCEEECCCTTCEECSS--CBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             ccCccceEEE---CCCCCEEEcccccceeccC--CcccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCC
Confidence            9999999999   7788999999999986543  2345689999999999999999999999999999999999999999


Q ss_pred             CCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCC-----HHHHHcCCcccCC
Q 009980          246 AQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPS-----AQELLNHPWVIGD  305 (521)
Q Consensus       246 ~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t-----~~~~l~h~~~~~~  305 (521)
                      +.+..+....+..+...++    ..+|+++++||.+||..||.+||+     ++++++||||.+.
T Consensus       240 ~~~~~~~~~~i~~~~~~~p----~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~f~~~  300 (350)
T 1rdq_E          240 ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT  300 (350)
T ss_dssp             CSSHHHHHHHHHHCCCCCC----TTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTC
T ss_pred             CCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcCcCCC
Confidence            9999999999998877665    458999999999999999999998     9999999999754

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=100.00  E-value=1.4e-51  Score=415.81  Aligned_cols=265  Identities=29%  Similarity=0.417  Sum_probs=229.1

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      .-.++|++.+.||+|+||+||+|+++.  +++.||+|++.+.....                         ......+.+
T Consensus        66 ~~~~~y~~~~~LG~G~fG~V~~~~~~~--~~~~~AiK~~~k~~~~~-------------------------~~~~~~~~~  118 (410)
T 3v8s_A           66 MKAEDYEVVKVIGRGAFGEVQLVRHKS--TRKVYAMKLLSKFEMIK-------------------------RSDSAFFWE  118 (410)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETT--TCCEEEEEEEEHHHHHH-------------------------TCCCSTHHH
T ss_pred             cCccccEEEEEEEcCCCEEEEEEEECC--CCcEEEEEEEehhhhhh-------------------------hHHHHHHHH
Confidence            446799999999999999999999998  78999999997632111                         011234778


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHR  166 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~  166 (521)
                      |+.+++.+     +||||+++++++.+++.+|+|||||+||+|.+++.. ..+++..++.++.||+.||.|||++||+||
T Consensus       119 E~~il~~l-----~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~-~~~~e~~~~~~~~qi~~aL~~LH~~givHr  192 (410)
T 3v8s_A          119 ERDIMAFA-----NSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN-YDVPEKWARFYTAEVVLALDAIHSMGFIHR  192 (410)
T ss_dssp             HHHHHHHC-----CCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred             HHHHHHhC-----CCCCCCeEEEEEEECCEEEEEEeCCCCCcHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEec
Confidence            99999988     999999999999999999999999999999998875 579999999999999999999999999999


Q ss_pred             cCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC--CcccccCCcccccccccccCC----CCchhhhHHHHHHHHHHHhC
Q 009980          167 DLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD--PVVGLFGSIDYVSPEALLQDR----ITSKSDMWSLGVILYILLSG  240 (521)
Q Consensus       167 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~----~~~~~DiwslG~il~~ll~g  240 (521)
                      ||||+|||+   +.++.+||+|||+|+......  .....+||+.|+|||++.+..    |+.++|||||||++|+|++|
T Consensus       193 DLKp~NILl---~~~g~ikL~DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G  269 (410)
T 3v8s_A          193 DVKPDNMLL---DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG  269 (410)
T ss_dssp             CCSGGGEEE---CTTSCEEECCCTTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHS
T ss_pred             cCCHHHeeE---CCCCCEEEeccceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhC
Confidence            999999999   788999999999998654433  223568999999999998665    78999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCC--CCCHHHHHcCCcccCCCC
Q 009980          241 YPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNR--RPSAQELLNHPWVIGDSA  307 (521)
Q Consensus       241 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~--R~t~~~~l~h~~~~~~~~  307 (521)
                      ++||.+.+..+....+..+...+..+.+..+|+++++||.+||..+|.+  ||+++++++||||++...
T Consensus       270 ~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~~~w  338 (410)
T 3v8s_A          270 DTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQW  338 (410)
T ss_dssp             SCTTCCSSHHHHHHHHHTHHHHCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCCSSC
T ss_pred             CCCCCCCChhhHHHHHHhccccccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcCccccCCCH
Confidence            9999999999888888876433333334679999999999999999988  999999999999987543

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=100.00  E-value=7.4e-51  Score=411.19  Aligned_cols=262  Identities=34%  Similarity=0.629  Sum_probs=220.3

Q ss_pred             cccccceeec-ccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHH
Q 009980            6 RKLTDEYEVT-DILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALL   84 (521)
Q Consensus         6 ~~~~~~Y~~~-~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (521)
                      ..+.++|.+. +.||+|+||+||+|+++.  +++.||||++..                                 ...+
T Consensus        57 ~~~~~~y~~~~~~LG~G~~g~V~~~~~~~--~~~~vAiK~~~~---------------------------------~~~~  101 (400)
T 1nxk_A           57 NAIIDDYKVTSQVLGLGINGKVLQIFNKR--TQEKFALKMLQD---------------------------------CPKA  101 (400)
T ss_dssp             SCGGGTEEEEEEEEEEETTEEEEEEEETT--TCCEEEEEEEEC---------------------------------SHHH
T ss_pred             CcccccceeccceeeeccCeEEEEEEECC--CCCEEEEEEeCc---------------------------------chhH
Confidence            3466788887 789999999999999988  788999999853                                 1236


Q ss_pred             HHHHHHHHHHhhccCCCCCccceeEEEEe----CCeEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHH
Q 009980           85 TNEILVMRKIVENVSPHPNVIDLYDVYED----QNGVHLILELCSGGELFDRIVAQE--RYMEVGAAAVIRQIAEGLAAL  158 (521)
Q Consensus        85 ~~E~~~l~~l~~~~~~hpniv~~~~~~~~----~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~al~~l  158 (521)
                      .+|+.++.++    .+||||++++++|..    ...+|||||||.||+|.+++...+  .+++..++.++.||+.||.||
T Consensus       102 ~~E~~~~~~~----~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~L  177 (400)
T 1nxk_A          102 RREVELHWRA----SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL  177 (400)
T ss_dssp             HHHHHHHHHH----TTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHh----cCCCCcceEeEEEeecccCCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            7888887665    389999999999976    567999999999999999998754  599999999999999999999


Q ss_pred             HHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHH
Q 009980          159 HQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILL  238 (521)
Q Consensus       159 H~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll  238 (521)
                      |++||+||||||+|||+.....++.+||+|||+++...........+||+.|+|||++.+..|+.++|||||||++|+|+
T Consensus       178 H~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell  257 (400)
T 1nxk_A          178 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL  257 (400)
T ss_dssp             HHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHH
T ss_pred             HHCCccccCcCcceEEEecCCCCccEEEEecccccccCCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHH
Confidence            99999999999999999443347889999999998765555556678999999999999999999999999999999999


Q ss_pred             hCCCCCCCCCcH----HHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCC
Q 009980          239 SGYPPFIAQSNR----QKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDS  306 (521)
Q Consensus       239 ~g~~pf~~~~~~----~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~  306 (521)
                      +|.+||.+....    .....+..+.+.++...|..+|+++++||.+||..||.+|||+.++++||||....
T Consensus       258 ~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~~  329 (400)
T 1nxk_A          258 CGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST  329 (400)
T ss_dssp             HSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHTTT
T ss_pred             hCCCCCCCCccccccHHHHHHHHcCcccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccCCC
Confidence            999999776533    25667778888888788889999999999999999999999999999999997644

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=2.3e-51  Score=397.94  Aligned_cols=249  Identities=19%  Similarity=0.297  Sum_probs=192.8

Q ss_pred             cccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      +.++|.+.+.||+|+||+||+|++    +++.||||++....                             ......+.|
T Consensus         1 Iar~i~L~~~iG~G~fG~Vy~~~~----~g~~VAvK~l~~~~-----------------------------~~~~~~e~E   47 (303)
T 3hmm_A            1 IARTIVLQESIGKGRFGEVWRGKW----RGEEVAVKIFSSRE-----------------------------ERSWFREAE   47 (303)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEE----TTEEEEEEEECGGG-----------------------------HHHHHHHHH
T ss_pred             CCcEEEEEEEEeeCCCeEEEEEEE----CCEEEEEEEECccc-----------------------------hhhHHHHHH
Confidence            457899999999999999999987    46789999985421                             112223445


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEeCC----eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYEDQN----GVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQA--  161 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~~~----~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~--  161 (521)
                      +..+.++     +|||||++++++..++    .+|||||||+||+|.+++.. .++++..+..++.|++.||.|||++  
T Consensus        48 i~~~~~l-----~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~-~~l~~~~~~~i~~~ia~gl~ylH~~~~  121 (303)
T 3hmm_A           48 IYQTVML-----RHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR-YTVTVEGMIKLALSTASGLAHLHMEIV  121 (303)
T ss_dssp             HHTSTTC-----CCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHHCCBC
T ss_pred             HHHHhcC-----CCCCCCcEEEEEEecCCCceEEEEEecCCCCCcHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHhhh
Confidence            6555566     9999999999997654    58999999999999999976 4699999999999999999999987  


Q ss_pred             ------CCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC-----cccccCCcccccccccccC------CCCch
Q 009980          162 ------NIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP-----VVGLFGSIDYVSPEALLQD------RITSK  224 (521)
Q Consensus       162 ------~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~------~~~~~  224 (521)
                            +|+||||||+|||+   +.++.+||+|||+|+.......     ....+||+.|||||++.+.      .|+.+
T Consensus       122 ~~~~~~~IiHRDlKp~NILl---~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k  198 (303)
T 3hmm_A          122 GTQGKPAIAHRDLKSKNILV---KKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKR  198 (303)
T ss_dssp             STTCBCCEECSCCCGGGEEE---CTTSCEEECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHH
T ss_pred             hccCCCCEeeccCCcccEEE---CCCCCEEEEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChh
Confidence                  99999999999999   7889999999999976533221     2245799999999999754      46789


Q ss_pred             hhhHHHHHHHHHHHhCCCCCCCCC---------------cHHHHHHHHcCCCCCc-hhhh--hccCHHHHHHHHHhccCC
Q 009980          225 SDMWSLGVILYILLSGYPPFIAQS---------------NRQKQQMIMAGEFSFY-EQTW--KNISSSAKQLISSLLTVD  286 (521)
Q Consensus       225 ~DiwslG~il~~ll~g~~pf~~~~---------------~~~~~~~i~~~~~~~~-~~~~--~~~s~~~~~li~~~l~~d  286 (521)
                      +||||+||++|||+||.+||....               .......+......+. +..+  ...++.+.+|+.+||..|
T Consensus       199 ~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~d  278 (303)
T 3hmm_A          199 ADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYAN  278 (303)
T ss_dssp             HHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSS
T ss_pred             HhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccC
Confidence            999999999999999987663321               1233333333333221 1111  124567899999999999


Q ss_pred             CCCCCCHHHHHc
Q 009980          287 PNRRPSAQELLN  298 (521)
Q Consensus       287 p~~R~t~~~~l~  298 (521)
                      |++|||+.++++
T Consensus       279 P~~RPt~~ei~~  290 (303)
T 3hmm_A          279 GAARLTALRIKK  290 (303)
T ss_dssp             GGGSCCHHHHHH
T ss_pred             HhHCcCHHHHHH
Confidence            999999999986

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=100.00  E-value=1.4e-50  Score=405.04  Aligned_cols=263  Identities=23%  Similarity=0.409  Sum_probs=228.2

Q ss_pred             ccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHH
Q 009980            5 TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALL   84 (521)
Q Consensus         5 ~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (521)
                      .....++|++.+.||+|+||.||+|+++.  +++.||||++.+.....                         ......+
T Consensus        10 ~~v~~~~y~i~~~LG~G~fG~V~~~~~~~--~~~~~AiK~~~~~~~~~-------------------------~~~~~~~   62 (384)
T 4fr4_A           10 EDVNFDHFEILRAIGKGSFGKVCIVQKND--TKKMYAMKYMNKQKCVE-------------------------RNEVRNV   62 (384)
T ss_dssp             CCCCGGGEEEEEEEECCTTCCEEEEEETT--TCCEEEEEEEEHHHHHH-------------------------TTCHHHH
T ss_pred             CCCChHHeEEEEEEeeCCCeEEEEEEECC--CCCEEEEEEEehhhccc-------------------------HHHHHHH
Confidence            44556899999999999999999999988  78999999997532211                         1123457


Q ss_pred             HHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 009980           85 TNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIV  164 (521)
Q Consensus        85 ~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~  164 (521)
                      .+|+.+++++     +||||++++++|.+.+.+|+||||+.||+|.+++...+.+++..++.++.||+.||.|||++||+
T Consensus        63 ~~E~~il~~l-----~hp~Iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~giv  137 (384)
T 4fr4_A           63 FKELQIMQGL-----EHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRII  137 (384)
T ss_dssp             HHHHHHHHTC-----CCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHhC-----CCCCCCcEEEEEEeCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCce
Confidence            8899999988     99999999999999999999999999999999999988999999999999999999999999999


Q ss_pred             eccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCccccccccccc---CCCCchhhhHHHHHHHHHHHhCC
Q 009980          165 HRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQ---DRITSKSDMWSLGVILYILLSGY  241 (521)
Q Consensus       165 H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwslG~il~~ll~g~  241 (521)
                      ||||||+|||+   +.++.+||+|||+|+...........+||+.|+|||++.+   ..|+.++|||||||++|+|++|.
T Consensus       138 HrDlkp~NIll---~~~g~vkL~DFG~a~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~  214 (384)
T 4fr4_A          138 HRDMKPDNILL---DEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGR  214 (384)
T ss_dssp             CCCCSGGGEEE---CTTSCEEECCCTTCEECCTTCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSS
T ss_pred             eccCcHHHeEE---CCCCCEEEeccceeeeccCCCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCC
Confidence            99999999999   7888999999999987665556667789999999999974   45899999999999999999999


Q ss_pred             CCCCCCC---cHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCC-HHHHHcCCcccCCC
Q 009980          242 PPFIAQS---NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPS-AQELLNHPWVIGDS  306 (521)
Q Consensus       242 ~pf~~~~---~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t-~~~~l~h~~~~~~~  306 (521)
                      +||...+   ..+....+......++    ..+|+.+.+||.+||..||.+||+ ++++++||||.+..
T Consensus       215 ~Pf~~~~~~~~~~~~~~~~~~~~~~p----~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~hp~f~~~~  279 (384)
T 4fr4_A          215 RPYHIRSSTSSKEIVHTFETTVVTYP----SAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMNDIN  279 (384)
T ss_dssp             CSSCCCTTSCHHHHHHHHHHCCCCCC----TTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTSGGGTTCC
T ss_pred             CCCCCCCCccHHHHHHHHhhcccCCC----CcCCHHHHHHHHHHhcCCHhHhcccHHHHHcChhhhcCC
Confidence            9997543   3445555555555544    458999999999999999999998 89999999998643

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=1.8e-50  Score=395.08  Aligned_cols=266  Identities=25%  Similarity=0.427  Sum_probs=219.2

Q ss_pred             ccccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHH
Q 009980            3 QETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDA   82 (521)
Q Consensus         3 ~~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (521)
                      ..++.+.++|++.+.||+|+||+||+|+++   +++.||||++.......                          ....
T Consensus        14 ~~~q~l~~~y~~~~~lG~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~--------------------------~~~~   64 (311)
T 3niz_A           14 LYFQGLMEKYQKLEKVGEGTYGVVYKAKDS---QGRIVALKRIRLDAEDE--------------------------GIPS   64 (311)
T ss_dssp             -CEECSSCEEEEEEEEEECSSCEEEEEEET---TSCEEEEEEEC--------------------------------CHHH
T ss_pred             eeecchHhhhHhhhhccCCCCeEEEEEEEC---CCCEEEEEEEecccccc--------------------------hhhH
Confidence            356788999999999999999999999985   57899999986432211                          1234


Q ss_pred             HHHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC
Q 009980           83 LLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQA  161 (521)
Q Consensus        83 ~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~~  161 (521)
                      .+.+|+.+++++     +||||+++++++.+++.+|+||||+.| +|.+.+... ..+++..++.++.||+.||.|||++
T Consensus        65 ~~~~E~~~l~~l-----~hp~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~  138 (311)
T 3niz_A           65 TAIREISLLKEL-----HHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH  138 (311)
T ss_dssp             HHHHHHHHHHHC-----CCTTBCCEEEEECCSSCEEEEEECCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHc-----CCCCEeeeeeEEccCCEEEEEEcCCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            578899999998     999999999999999999999999986 788877654 4599999999999999999999999


Q ss_pred             CCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCC-CCcccccCCccccccccccc-CCCCchhhhHHHHHHHHHHHh
Q 009980          162 NIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYT-DPVVGLFGSIDYVSPEALLQ-DRITSKSDMWSLGVILYILLS  239 (521)
Q Consensus       162 ~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~ll~  239 (521)
                      ||+||||||+|||+   +.++.+||+|||+|+..... .......||+.|+|||++.+ ..++.++||||+||++|+|++
T Consensus       139 ~ivH~Dikp~NIl~---~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~  215 (311)
T 3niz_A          139 RILHRDLKPQNLLI---NSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMIT  215 (311)
T ss_dssp             TEECCCCCGGGEEE---CTTCCEEECCCTTCEETTSCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHH
T ss_pred             CcccCCCchHhEEE---CCCCCEEEccCcCceecCCCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHh
Confidence            99999999999999   77889999999999865432 23344578999999999876 568999999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHHcCCCCCc--------------------------hhhhhccCHHHHHHHHHhccCCCCCCCCH
Q 009980          240 GYPPFIAQSNRQKQQMIMAGEFSFY--------------------------EQTWKNISSSAKQLISSLLTVDPNRRPSA  293 (521)
Q Consensus       240 g~~pf~~~~~~~~~~~i~~~~~~~~--------------------------~~~~~~~s~~~~~li~~~l~~dp~~R~t~  293 (521)
                      |.+||.+.+..+....+........                          ....+.+++++++||.+||+.||.+|||+
T Consensus       216 g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~  295 (311)
T 3niz_A          216 GKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISA  295 (311)
T ss_dssp             SSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCH
T ss_pred             CCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCH
Confidence            9999988877766666543211111                          11224578899999999999999999999


Q ss_pred             HHHHcCCcccCCC
Q 009980          294 QELLNHPWVIGDS  306 (521)
Q Consensus       294 ~~~l~h~~~~~~~  306 (521)
                      .++|+||||++..
T Consensus       296 ~ell~hp~f~~~~  308 (311)
T 3niz_A          296 RDAMNHPYFKDLD  308 (311)
T ss_dssp             HHHHTSGGGTTSC
T ss_pred             HHHhcCcccccCC
Confidence            9999999998643

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=100.00  E-value=7.3e-51  Score=417.93  Aligned_cols=263  Identities=32%  Similarity=0.507  Sum_probs=235.0

Q ss_pred             cccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHH
Q 009980            4 ETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDAL   83 (521)
Q Consensus         4 ~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (521)
                      .+....++|.+++.||+|+||.||+|+++.  +++.||||++.+.....                         ......
T Consensus        10 ~~~~~~~~Y~l~~~LG~G~fg~V~~a~~~~--~g~~vAvK~i~~~~~~~-------------------------~~~~~~   62 (476)
T 2y94_A           10 DGRVKIGHYILGDTLGVGTFGKVKVGKHEL--TGHKVAVKILNRQKIRS-------------------------LDVVGK   62 (476)
T ss_dssp             CSCCEETTEEEEEEEECCSSSCEEEEEETT--TCCEEEEEEEEHHHHHH-------------------------TTTHHH
T ss_pred             CCCceecCEEEEEEEeeCCCeEEEEEEECC--CCCEEEEEEEEhhhccC-------------------------HHHHHH
Confidence            455677899999999999999999999988  78999999997532110                         012345


Q ss_pred             HHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 009980           84 LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANI  163 (521)
Q Consensus        84 ~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i  163 (521)
                      +.+|+.+++.+     +||||+++++++.+.+.+|+|||||.||+|.+++...+.+++..++.++.||+.||.|||++||
T Consensus        63 ~~~Ei~~l~~l-----~HpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi  137 (476)
T 2y94_A           63 IRREIQNLKLF-----RHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMV  137 (476)
T ss_dssp             HHHHHHHHTTC-----CCTTBCCEEEEEECSSEEEEEEECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTTTE
T ss_pred             HHHHHHHHHhC-----CCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence            88999999888     9999999999999999999999999999999999988899999999999999999999999999


Q ss_pred             eeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCC-CchhhhHHHHHHHHHHHhCCC
Q 009980          164 VHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRI-TSKSDMWSLGVILYILLSGYP  242 (521)
Q Consensus       164 ~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~~ll~g~~  242 (521)
                      +||||||+|||+   +.++.+||+|||++............+||+.|+|||++.+..+ +.++|||||||++|+|++|.+
T Consensus       138 vHrDLkp~NIll---~~~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~  214 (476)
T 2y94_A          138 VHRDLKPENVLL---DAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTL  214 (476)
T ss_dssp             ECSCCSGGGEEE---CTTCCEEECCCSSCEECCTTCCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSC
T ss_pred             CcccccHHHEEE---ecCCCeEEEeccchhhccccccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCC
Confidence            999999999999   7788999999999987665555566789999999999988766 789999999999999999999


Q ss_pred             CCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCC
Q 009980          243 PFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGD  305 (521)
Q Consensus       243 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~  305 (521)
                      ||.+.+.......+..+.+..+    ..+++++++||.+||..||.+|||+.++++||||...
T Consensus       215 Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~~~  273 (476)
T 2y94_A          215 PFDDDHVPTLFKKICDGIFYTP----QYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQD  273 (476)
T ss_dssp             SSCCSSSHHHHHHHHTTCCCCC----TTCCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHTT
T ss_pred             CCCCCCHHHHHHHHhcCCcCCC----ccCCHHHHHHHHHHcCCCchhCcCHHHHHhCHHhhhc
Confidence            9999998888899988876554    4589999999999999999999999999999999764

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=100.00  E-value=1.4e-50  Score=398.95  Aligned_cols=273  Identities=36%  Similarity=0.568  Sum_probs=236.3

Q ss_pred             ccccccccceeec-ccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccH
Q 009980            3 QETRKLTDEYEVT-DILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSD   81 (521)
Q Consensus         3 ~~~~~~~~~Y~~~-~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (521)
                      +..+.+.++|.+. +.||+|+||.||+|+++.  +++.||||++.+....                          ....
T Consensus        21 ~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~--~~~~vavK~~~~~~~~--------------------------~~~~   72 (327)
T 3lm5_A           21 QSMENFNNFYILTSKELGRGKFAVVRQCISKS--TGQEYAAKFLKKRRRG--------------------------QDCR   72 (327)
T ss_dssp             BCHHHHHHHEEEEEEEEEEETTEEEEEEEETT--TCCEEEEEEEESEETT--------------------------EECH
T ss_pred             HHHHhhhhEEeeccceeCCCCCeEEEEEEECC--CCCEEEEEEEehhhcc--------------------------hHHH
Confidence            5667889999998 899999999999999988  7889999999753221                          1224


Q ss_pred             HHHHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 009980           82 ALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ--ERYMEVGAAAVIRQIAEGLAALH  159 (521)
Q Consensus        82 ~~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~al~~lH  159 (521)
                      ..+.+|+.+++++    ..||||+++++++.+.+.+|+||||+.||+|.+++...  +.+++..++.++.||+.||.|||
T Consensus        73 ~~~~~e~~~l~~l----~~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH  148 (327)
T 3lm5_A           73 AEILHEIAVLELA----KSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH  148 (327)
T ss_dssp             HHHHHHHHHHHHT----TTCTTBCCEEEEEECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhc----cCCCCEEEEEEEEEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH
Confidence            5688899999887    36799999999999999999999999999999988543  67999999999999999999999


Q ss_pred             HCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh
Q 009980          160 QANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS  239 (521)
Q Consensus       160 ~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~  239 (521)
                      ++||+||||||+||++......+.+||+|||+++............||+.|+|||++.+..++.++|||||||++|+|++
T Consensus       149 ~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~  228 (327)
T 3lm5_A          149 QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLT  228 (327)
T ss_dssp             HTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHH
T ss_pred             HCCeecCcCChHHEEEecCCCCCcEEEeeCccccccCCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHh
Confidence            99999999999999994433478899999999987665545556689999999999999999999999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCCC
Q 009980          240 GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSA  307 (521)
Q Consensus       240 g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~~  307 (521)
                      |..||.+.+..+....+......++...+..+++.+++||.+||..||.+|||++++|+||||++...
T Consensus       229 g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~~~~  296 (327)
T 3lm5_A          229 HTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDF  296 (327)
T ss_dssp             SSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCGGGCCCCT
T ss_pred             CCCCCCCCCchHHHHHHHhcccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCCHhhccccc
Confidence            99999999988888888888888888778889999999999999999999999999999999986544

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=5.6e-51  Score=414.62  Aligned_cols=266  Identities=27%  Similarity=0.430  Sum_probs=228.2

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      +...++|++.+.||+|+||+||+|+++.  +++.||||++.+.....                         ......+.
T Consensus        70 ~~~~~~y~~~~~LG~G~fG~V~~~~~~~--~~~~vAvK~~~~~~~~~-------------------------~~~~~~~~  122 (437)
T 4aw2_A           70 RLHREDFEILKVIGRGAFGEVAVVKLKN--ADKVFAMKILNKWEMLK-------------------------RAETACFR  122 (437)
T ss_dssp             SCCGGGEEEEEEEEECSSEEEEEEEETT--TTEEEEEEEEEHHHHHH-------------------------TTTTCCHH
T ss_pred             cCChhheEEEEEEEeCCCEEEEEEEEcC--CCcEEEEEEEEHHHhhh-------------------------HHHHHHHH
Confidence            4456899999999999999999999987  78899999997532111                         01122378


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQANIV  164 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~al~~lH~~~i~  164 (521)
                      +|..++..+     +||||+++++++.+++.+|+|||||.||+|.+++.. .+.+++..++.++.||+.||.|||++||+
T Consensus       123 ~E~~il~~~-----~hp~Iv~l~~~~~~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gii  197 (437)
T 4aw2_A          123 EERDVLVNG-----DSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYV  197 (437)
T ss_dssp             HHHHHHHHS-----CTTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHhC-----CCCCEEEEEEEEeeCCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeE
Confidence            899999888     999999999999999999999999999999999987 57899999999999999999999999999


Q ss_pred             eccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC--cccccCCcccccccccc-----cCCCCchhhhHHHHHHHHHH
Q 009980          165 HRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP--VVGLFGSIDYVSPEALL-----QDRITSKSDMWSLGVILYIL  237 (521)
Q Consensus       165 H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslG~il~~l  237 (521)
                      ||||||+|||+   +.++.+||+|||+|+.......  ....+||+.|+|||++.     ...|+.++|||||||++|+|
T Consensus       198 HrDLKp~NILl---~~~g~vkL~DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~el  274 (437)
T 4aw2_A          198 HRDIKPDNILM---DMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEM  274 (437)
T ss_dssp             CCCCSGGGEEE---CTTSCEEECCCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHH
T ss_pred             ecccCHHHeeE---cCCCCEEEcchhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHH
Confidence            99999999999   7889999999999976543332  23458999999999997     45789999999999999999


Q ss_pred             HhCCCCCCCCCcHHHHHHHHcCC--CCCchhhhhccCHHHHHHHHHhccCCCCC--CCCHHHHHcCCcccCCCC
Q 009980          238 LSGYPPFIAQSNRQKQQMIMAGE--FSFYEQTWKNISSSAKQLISSLLTVDPNR--RPSAQELLNHPWVIGDSA  307 (521)
Q Consensus       238 l~g~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~s~~~~~li~~~l~~dp~~--R~t~~~~l~h~~~~~~~~  307 (521)
                      ++|++||.+.+..+....+....  +.++. .+..+|+++++||.+||..+|++  ||+++++++||||.+...
T Consensus       275 ltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~-~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~~i~w  347 (437)
T 4aw2_A          275 LYGETPFYAESLVETYGKIMNHKERFQFPT-QVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGIDW  347 (437)
T ss_dssp             HHSSCTTCCSSHHHHHHHHHTHHHHCCCCS-SCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGTTCCT
T ss_pred             HhCCCCCCCCChhHHHHhhhhccccccCCc-ccccCCHHHHHHHHHHhcccccccCCCCHHHHhCCCccCCCCH
Confidence            99999999999888888887643  23322 23568999999999999998888  999999999999987544

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=100.00  E-value=1.6e-50  Score=403.94  Aligned_cols=262  Identities=27%  Similarity=0.464  Sum_probs=222.9

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      ....++|++.+.||+|+||.||+|+++.  +++.||||++.+......                         .....+.
T Consensus        34 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~--~~~~~AiK~~~~~~~~~~-------------------------~~~~~~~   86 (373)
T 2r5t_A           34 HAKPSDFHFLKVIGKGSFGKVLLARHKA--EEVFYAVKVLQKKAILKK-------------------------KEEKHIM   86 (373)
T ss_dssp             TCCGGGEEEEEEEECCTTCEEEEEEETT--TCCEEEEEEEEGGGBC----------------------------------
T ss_pred             CCChhheEEEEEEeeCCCeEEEEEEEcC--CCCEEEEEEEEHHHhhhh-------------------------HHHHHHH
Confidence            3456799999999999999999999988  788999999987543211                         0112234


Q ss_pred             HHHHH-HHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 009980           86 NEILV-MRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIV  164 (521)
Q Consensus        86 ~E~~~-l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~  164 (521)
                      .|..+ ++.     .+||||+++++++.+.+.+|+||||+.||+|.+++...+.+++..++.++.||+.||.|||++||+
T Consensus        87 ~e~~~ll~~-----~~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~giv  161 (373)
T 2r5t_A           87 SERNVLLKN-----VKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIV  161 (373)
T ss_dssp             ----CCBCC-----CCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHh-----CCCCCCCCEEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCce
Confidence            44443 223     389999999999999999999999999999999999888999999999999999999999999999


Q ss_pred             eccCCCCcEEEeeCCCCCCEEEeecCCCccC-CCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCC
Q 009980          165 HRDLKPENCLFLNDREDSPLKIMDFGLSSVE-GYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPP  243 (521)
Q Consensus       165 H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~p  243 (521)
                      ||||||+|||+   +.++.+||+|||+|+.. .........+||+.|+|||++.+..|+.++|||||||++|+|++|.+|
T Consensus       162 HrDlkp~NIll---~~~g~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~P  238 (373)
T 2r5t_A          162 YRDLKPENILL---DSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPP  238 (373)
T ss_dssp             CCCCCGGGEEE---CTTSCEEECCCCBCGGGBCCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCT
T ss_pred             ecCCCHHHEEE---CCCCCEEEeeCccccccccCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCC
Confidence            99999999999   77889999999999853 223344567899999999999999999999999999999999999999


Q ss_pred             CCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCH----HHHHcCCcccCCC
Q 009980          244 FIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSA----QELLNHPWVIGDS  306 (521)
Q Consensus       244 f~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~----~~~l~h~~~~~~~  306 (521)
                      |.+.+..+....+......++    ..+++.+++||.+||..||.+||++    .++++||||.+..
T Consensus       239 f~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~f~~~~  301 (373)
T 2r5t_A          239 FYSRNTAEMYDNILNKPLQLK----PNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLIN  301 (373)
T ss_dssp             TCCSBHHHHHHHHHHSCCCCC----SSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGGGTTCC
T ss_pred             CCCCCHHHHHHHHHhcccCCC----CCCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCCccccCCC
Confidence            999999999999988876654    4689999999999999999999986    6999999998643

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=100.00  E-value=6.2e-50  Score=386.52  Aligned_cols=262  Identities=34%  Similarity=0.600  Sum_probs=222.8

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      .+.++|.+.+.||+|+||.||+|.++.  ++..||+|++......                           .....+.+
T Consensus        19 ~i~~~y~~~~~lg~G~~g~V~~~~~~~--~~~~~aiK~~~~~~~~---------------------------~~~~~~~~   69 (285)
T 3is5_A           19 TIDDLFIFKRKLGSGAFGDVHLVEERS--SGLERVIKTINKDRSQ---------------------------VPMEQIEA   69 (285)
T ss_dssp             CHHHHEEEEEEEEECSSCEEEEEEETT--TCCEEEEEEEEGGGCC---------------------------SCHHHHHH
T ss_pred             ChhhheeecceeccCCCeEEEEEEEcc--CCceEEEEEeeccccc---------------------------hhHHHHHH
Confidence            577899999999999999999999987  7889999999764321                           22456889


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA----QERYMEVGAAAVIRQIAEGLAALHQAN  162 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qil~al~~lH~~~  162 (521)
                      |+.+++++     +||||+++++++.+.+..|+||||+.||+|.+.+..    ...+++..+..++.||+.||.|||++|
T Consensus        70 E~~~l~~l-----~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~  144 (285)
T 3is5_A           70 EIEVLKSL-----DHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH  144 (285)
T ss_dssp             HHHHHHTC-----CCTTBCCEEEEEECSSEEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHhC-----CCchHHhHHHheecCCeEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99999998     999999999999999999999999999999998854    367999999999999999999999999


Q ss_pred             CeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCC
Q 009980          163 IVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYP  242 (521)
Q Consensus       163 i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~  242 (521)
                      |+||||||+||++...+..+.+||+|||++.............||+.|+|||++. ..++.++||||||+++|+|++|..
T Consensus       145 ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~  223 (285)
T 3is5_A          145 VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCL  223 (285)
T ss_dssp             CCCCCCSGGGEEESSSSTTCCEEECCCCCCCC----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSC
T ss_pred             EEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCC
Confidence            9999999999999655566889999999998765554455667999999999985 578999999999999999999999


Q ss_pred             CCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccC
Q 009980          243 PFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIG  304 (521)
Q Consensus       243 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~  304 (521)
                      ||.+.+..+....+......+... ...+++++.+||.+||..||.+|||+.++|+||||++
T Consensus       224 pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~f~~  284 (285)
T 3is5_A          224 PFTGTSLEEVQQKATYKEPNYAVE-CRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQ  284 (285)
T ss_dssp             SSCCSSHHHHHHHHHHCCCCCCC---CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGGC
T ss_pred             CCCCCCHHHHHhhhccCCcccccc-cCcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHhhc
Confidence            999988887777776665544332 2457999999999999999999999999999999974

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=4.3e-50  Score=389.08  Aligned_cols=259  Identities=25%  Similarity=0.401  Sum_probs=214.3

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ++|++.+.||+|+||+||+|+++.  +++.||||++.......                          .....+.+|+.
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~--~~~~vavK~~~~~~~~~--------------------------~~~~~~~~E~~   53 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRE--THEIVALKRVRLDDDDE--------------------------GVPSSALREIC   53 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETT--TCCEEEEEEEESSCSST--------------------------THHHHHHHHHH
T ss_pred             CCceeeeEecCCCCeEEEEEEECC--CCceEEEEeeeccCCcC--------------------------CcchHHHHHHH
Confidence            689999999999999999999988  78899999997543211                          12345778999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIV-AQERYMEVGAAAVIRQIAEGLAALHQANIVHRDL  168 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~-~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dl  168 (521)
                      +++++     +||||+++++++.+++.+|+||||+.| +|.+.+. ..+.+++..++.++.||+.||.|||++||+||||
T Consensus        54 ~l~~l-----~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~di  127 (292)
T 3o0g_A           54 LLKEL-----KHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDL  127 (292)
T ss_dssp             HHTTC-----CCTTBCCEEEEEEETTEEEEEEECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             HHhcC-----CCCCEeeEEeEEEeCCEEEEEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence            99988     999999999999999999999999987 5555554 4678999999999999999999999999999999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCccCCCC-CCcccccCCcccccccccccCC-CCchhhhHHHHHHHHHHHhCCCC-CC
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSSVEGYT-DPVVGLFGSIDYVSPEALLQDR-ITSKSDMWSLGVILYILLSGYPP-FI  245 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~~ll~g~~p-f~  245 (521)
                      ||+||++   +.++.+||+|||+|+..... .......||+.|+|||++.+.. ++.++||||+||++|+|++|..| |.
T Consensus       128 kp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~  204 (292)
T 3o0g_A          128 KPQNLLI---NRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFP  204 (292)
T ss_dssp             SGGGEEE---CTTSCEEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCC
T ss_pred             CHHHEEE---cCCCCEEEeecccceecCCccccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcC
Confidence            9999999   77889999999999865432 2334557899999999997765 79999999999999999987777 55


Q ss_pred             CCCcHHHHHHHHcCCCCCch-------------------------hhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCC
Q 009980          246 AQSNRQKQQMIMAGEFSFYE-------------------------QTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHP  300 (521)
Q Consensus       246 ~~~~~~~~~~i~~~~~~~~~-------------------------~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~  300 (521)
                      +.+..+....+......+..                         ...+.+++.+++||.+||+.||.+|||++++|+||
T Consensus       205 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp  284 (292)
T 3o0g_A          205 GNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHP  284 (292)
T ss_dssp             CSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred             CCCHHHHHHHHHHHhCCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCc
Confidence            55555555555432111111                         11235789999999999999999999999999999


Q ss_pred             cccCC
Q 009980          301 WVIGD  305 (521)
Q Consensus       301 ~~~~~  305 (521)
                      ||+..
T Consensus       285 ~f~~~  289 (292)
T 3o0g_A          285 YFSDF  289 (292)
T ss_dssp             GGTTC
T ss_pred             ccccC
Confidence            99864

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=100.00  E-value=1.8e-50  Score=411.07  Aligned_cols=271  Identities=34%  Similarity=0.620  Sum_probs=223.2

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      ..+.++|++.+.||+|+||.||+|.++.  +++.||||++.+.......                    .........+.
T Consensus       131 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~--~~~~vavK~~~~~~~~~~~--------------------~~~~~~~~~~~  188 (419)
T 3i6u_A          131 KALRDEYIMSKTLGSGACGEVKLAFERK--TCKKVAIRIISKRKFAIGS--------------------AREADPALNVE  188 (419)
T ss_dssp             HHHHTTEEEEEEEEECSSSEEEEEEETT--TCCEEEEEEEEGGGGTTC----------------------------CCHH
T ss_pred             hhhhccEEEEeEEeeCCCeEEEEEEECC--CCcEEEEEEEEechhcccc--------------------cccchhHHHHH
Confidence            3457899999999999999999999998  7889999999865332100                    00001122478


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      +|+.+++++     +||||+++++++. .+.+|+||||+.||+|.+++...+.+++..+..++.||+.||.|||++||+|
T Consensus       189 ~E~~~l~~l-----~hpniv~l~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH  262 (419)
T 3i6u_A          189 TEIEILKKL-----NHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIH  262 (419)
T ss_dssp             HHHHHHHHC-----CCTTBCCCCEEEE-SSEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             HHHHHHHhC-----CCCCEeeEEEEEe-cCceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence            999999999     9999999999985 4568999999999999999988889999999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCccccccccccc---CCCCchhhhHHHHHHHHHHHhCCC
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQ---DRITSKSDMWSLGVILYILLSGYP  242 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwslG~il~~ll~g~~  242 (521)
                      |||||+|||+...+....+||+|||+|+...........+||+.|+|||++.+   ..|+.++|||||||++|+|++|.+
T Consensus       263 rDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~  342 (419)
T 3i6u_A          263 RDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYP  342 (419)
T ss_dssp             SCCCGGGEEESSSSSSCCEEECCSSTTTSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSC
T ss_pred             cCCChHhEEEecCCCcceEEEeecccceecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCC
Confidence            99999999996545556799999999988765555566789999999999853   578899999999999999999999


Q ss_pred             CCCCCCc-HHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccC
Q 009980          243 PFIAQSN-RQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIG  304 (521)
Q Consensus       243 pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~  304 (521)
                      ||..... ......+..+...+....|..+|+.+++||.+||..||.+|||+.++|+||||+.
T Consensus       343 pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~  405 (419)
T 3i6u_A          343 PFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD  405 (419)
T ss_dssp             SSCCCSSSCCHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred             CCCCCcchHHHHHHHhcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCCcccCC
Confidence            9976543 3556677888888888888999999999999999999999999999999999974

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=100.00  E-value=5.7e-50  Score=394.30  Aligned_cols=264  Identities=28%  Similarity=0.487  Sum_probs=221.8

Q ss_pred             cccccceeecccccccCceEEEEeEEcc-CCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKT-CGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALL   84 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~-~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (521)
                      ....++|++.+.||+|+||.||+|++.. ..+++.||||++++......                        ......+
T Consensus        13 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~------------------------~~~~~~~   68 (327)
T 3a62_A           13 KIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRN------------------------AKDTAHT   68 (327)
T ss_dssp             CCCGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC------------------------------------
T ss_pred             CCCHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhh------------------------hhHHHHH
Confidence            3456899999999999999999999852 12788999999976432110                        0112346


Q ss_pred             HHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 009980           85 TNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIV  164 (521)
Q Consensus        85 ~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~  164 (521)
                      .+|+.+++++     +||||+++++++.+.+.+|+||||+.|++|.+++...+.+++..+..++.||+.||.|||++||+
T Consensus        69 ~~E~~~l~~l-----~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~iv  143 (327)
T 3a62_A           69 KAERNILEEV-----KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGII  143 (327)
T ss_dssp             --HHHHHHHC-----CCTTBCCEEEEEECSSCEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHhC-----CCCCccceeEEEEcCCEEEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEE
Confidence            7899999998     99999999999999999999999999999999999888999999999999999999999999999


Q ss_pred             eccCCCCcEEEeeCCCCCCEEEeecCCCccCCCC-CCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCC
Q 009980          165 HRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYT-DPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPP  243 (521)
Q Consensus       165 H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~p  243 (521)
                      ||||||+|||+   +.++.+||+|||+++..... ......+||+.|+|||++.+..++.++|||||||++|+|++|.+|
T Consensus       144 H~Dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~p  220 (327)
T 3a62_A          144 YRDLKPENIML---NHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP  220 (327)
T ss_dssp             CCCCCTTTEEE---CTTSCEEECCCSCC----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             cccCCHHHeEE---CCCCcEEEEeCCcccccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCC
Confidence            99999999999   77889999999999754322 223456799999999999988999999999999999999999999


Q ss_pred             CCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCC-----CHHHHHcCCcccCC
Q 009980          244 FIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRP-----SAQELLNHPWVIGD  305 (521)
Q Consensus       244 f~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~-----t~~~~l~h~~~~~~  305 (521)
                      |.+.+..+....+......++    ..+++++++||.+||..||.+||     ++.++++||||...
T Consensus       221 f~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~~  283 (327)
T 3a62_A          221 FTGENRKKTIDKILKCKLNLP----PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHI  283 (327)
T ss_dssp             CCCSSHHHHHHHHHHTCCCCC----TTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSSC
T ss_pred             CCCCCHHHHHHHHHhCCCCCC----CCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccCC
Confidence            999988888888888776655    45899999999999999999999     89999999999754

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=100.00  E-value=3.1e-50  Score=395.38  Aligned_cols=261  Identities=29%  Similarity=0.506  Sum_probs=220.9

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      .+.++|++.+.||+|+||+||+|+++.  +++.||||++.......                           ....+.+
T Consensus         4 ~~~~~y~i~~~lG~G~~g~V~~~~~~~--~~~~vavK~~~~~~~~~---------------------------~~~~~~~   54 (323)
T 3tki_A            4 PFVEDWDLVQTLGEGAYGEVQLAVNRV--TEEAVAVKIVDMKRAVD---------------------------CPENIKK   54 (323)
T ss_dssp             TTTTCEEEEEEEEEETTEEEEEEEETT--TCCEEEEEEEECC----------------------------------CHHH
T ss_pred             cHhhhceeeeEEecCCCEEEEEEEECC--CCcEEEEEEEEcccccc---------------------------hHHHHHH
Confidence            477899999999999999999999988  78899999996432211                           1234789


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHR  166 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~  166 (521)
                      |+.+++.+     +||||+++++++.+++..|+|||||.||+|.+++.....+++..+..++.||+.||.|||++||+||
T Consensus        55 E~~~l~~l-----~hpnIv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~  129 (323)
T 3tki_A           55 EICINKML-----NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR  129 (323)
T ss_dssp             HHHHHHHC-----CCTTBCCEEEEEECSSEEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred             HHHHHHhC-----CCCCCCeEEEEEecCCeEEEEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccc
Confidence            99999998     9999999999999999999999999999999999888889999999999999999999999999999


Q ss_pred             cCCCCcEEEeeCCCCCCEEEeecCCCccCCCC---CCcccccCCcccccccccccCCC-CchhhhHHHHHHHHHHHhCCC
Q 009980          167 DLKPENCLFLNDREDSPLKIMDFGLSSVEGYT---DPVVGLFGSIDYVSPEALLQDRI-TSKSDMWSLGVILYILLSGYP  242 (521)
Q Consensus       167 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~~ll~g~~  242 (521)
                      ||||+|||+   +.++.+||+|||++......   ......+||+.|+|||++.+..+ +.++|||||||++|+|++|..
T Consensus       130 Dlkp~NIll---~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~  206 (323)
T 3tki_A          130 DIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL  206 (323)
T ss_dssp             CCSGGGEEE---CTTCCEEECCCTTCEECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSC
T ss_pred             ccchHHEEE---eCCCCEEEEEeeccceeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCC
Confidence            999999999   77889999999999754322   22345679999999999987776 779999999999999999999


Q ss_pred             CCCCCCcHHH-HHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCC
Q 009980          243 PFIAQSNRQK-QQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDS  306 (521)
Q Consensus       243 pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~  306 (521)
                      ||...+.... ..........  ...+..+++.+.+||.+||..||.+|||+.++++||||....
T Consensus       207 pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~  269 (323)
T 3tki_A          207 PWDQPSDSCQEYSDWKEKKTY--LNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPL  269 (323)
T ss_dssp             SCSSSCTTSHHHHHHHTTCTT--STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCC
T ss_pred             CCCCCchHHHHHHHHhccccc--CCccccCCHHHHHHHHHHccCChhhCcCHHHHhhChhhcccc
Confidence            9987665422 2333333222  233577999999999999999999999999999999998543

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=100.00  E-value=2.8e-50  Score=403.12  Aligned_cols=261  Identities=37%  Similarity=0.651  Sum_probs=227.6

Q ss_pred             cccceee--cccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            8 LTDEYEV--TDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         8 ~~~~Y~~--~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      +.+.|.+  .+.||+|+||.||+|.++.  +++.||+|++.....                            .....+.
T Consensus        85 ~~~~~~~~~~~~lG~G~~g~Vy~a~~~~--~g~~vavK~~~~~~~----------------------------~~~~~~~  134 (373)
T 2x4f_A           85 VNSFYTVSKTEILGGGRFGQVHKCEETA--TGLKLAAKIIKTRGM----------------------------KDKEEVK  134 (373)
T ss_dssp             GGGTEEEEEEEECC-----CEEEEEETT--TCCEEEEEEEECCSH----------------------------HHHHHHH
T ss_pred             cccceeeecceEEecCcCEEEEEEEEcC--CCcEEEEEEEccccc----------------------------ccHHHHH
Confidence            4456666  5789999999999999987  788999999874221                            1235688


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQANIV  164 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~~~i~  164 (521)
                      +|+.+++++     +||||+++++++.+.+.+|+||||++|++|.+++... ..+++..+..++.||+.||.|||++||+
T Consensus       135 ~E~~~l~~l-----~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iv  209 (373)
T 2x4f_A          135 NEISVMNQL-----DHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYIL  209 (373)
T ss_dssp             HHHHHHTTC-----CCTTBCCEEEEEECSSEEEEEEECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHhC-----CCCCCCeEEEEEEECCEEEEEEeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence            999999998     9999999999999999999999999999999988754 4699999999999999999999999999


Q ss_pred             eccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCC
Q 009980          165 HRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF  244 (521)
Q Consensus       165 H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf  244 (521)
                      ||||||+|||+.. +..+.+||+|||+++...........+||+.|+|||++.+..++.++|||||||++|+|++|..||
T Consensus       210 H~Dlkp~NIll~~-~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf  288 (373)
T 2x4f_A          210 HLDLKPENILCVN-RDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPF  288 (373)
T ss_dssp             CCCCCGGGEEEEE-TTTTEEEECCCSSCEECCTTCBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred             cccCCHHHEEEec-CCCCcEEEEeCCCceecCCccccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCC
Confidence            9999999999854 345689999999998766555555667999999999999889999999999999999999999999


Q ss_pred             CCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccC
Q 009980          245 IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIG  304 (521)
Q Consensus       245 ~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~  304 (521)
                      .+.+..+....+....+.++...+..+++++++||.+||..||.+|||+.++|+||||..
T Consensus       289 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~  348 (373)
T 2x4f_A          289 LGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSD  348 (373)
T ss_dssp             CCSSHHHHHHHHHHTCCCSCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHC
T ss_pred             CCCCHHHHHHHHHhccCCCChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhcCcCcCC
Confidence            999998899999998888887788899999999999999999999999999999999974

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=100.00  E-value=7.6e-50  Score=385.48  Aligned_cols=268  Identities=36%  Similarity=0.641  Sum_probs=233.3

Q ss_pred             cccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      +.++|++.+.||+|+||.||+|+++.  +++.||+|++........                      ........+.+|
T Consensus         3 ~~~~y~~~~~lg~G~~g~V~~~~~~~--~~~~~avK~~~~~~~~~~----------------------~~~~~~~~~~~E   58 (283)
T 3bhy_A            3 VEDHYEMGEELGSGQFAIVRKCRQKG--TGKEYAAKFIKKRRLSSS----------------------RRGVSREEIERE   58 (283)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETT--TCCEEEEEEEEBCSSTTC----------------------SSSBCHHHHHHH
T ss_pred             hhhhhhhHHhhcccCceEEEEEEEcC--CCCeeehHHhhhcccccc----------------------ccchHHHHHHHH
Confidence            56899999999999999999999987  788999999986543221                      011234568899


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecc
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRD  167 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~d  167 (521)
                      +.+++++     +||||+++++++.+.+..|+||||+.|++|.+++.....+++..+..++.||+.||.|||++||+|||
T Consensus        59 ~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d  133 (283)
T 3bhy_A           59 VNILREI-----RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFD  133 (283)
T ss_dssp             HHHHHHC-----CCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             HHHHHhC-----CCCCeeehhheecCCCeEEEEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCC
Confidence            9999998     89999999999999999999999999999999998888999999999999999999999999999999


Q ss_pred             CCCCcEEEeeCC-CCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCC
Q 009980          168 LKPENCLFLNDR-EDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIA  246 (521)
Q Consensus       168 lkp~Nil~~~~~-~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~  246 (521)
                      |||+||++..+. ....+||+|||++.............||+.|+|||++.+..++.++||||||+++|+|++|..||.+
T Consensus       134 l~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~  213 (283)
T 3bhy_A          134 LKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG  213 (283)
T ss_dssp             CSGGGEEESCSSSSSCCEEECCCTTCEECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             CChHHEEEecCCCCCCceEEEecccceeccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCC
Confidence            999999994322 2237999999999876554444556799999999999988999999999999999999999999999


Q ss_pred             CCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccC
Q 009980          247 QSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIG  304 (521)
Q Consensus       247 ~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~  304 (521)
                      .+..+....+......++...+..+++.+.+||.+||..||.+|||+.++++||||+.
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~  271 (283)
T 3bhy_A          214 ETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKA  271 (283)
T ss_dssp             SSHHHHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHH
T ss_pred             cchHHHHHHhHhcccCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHH
Confidence            9888888888888888877778889999999999999999999999999999999963

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=100.00  E-value=1.1e-49  Score=398.19  Aligned_cols=268  Identities=34%  Similarity=0.601  Sum_probs=236.3

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      .+.++|++.+.||+|+||.||+|+++.  +++.||||++........                    ..........+.+
T Consensus        91 ~~~~~y~~~~~lg~G~~g~Vy~a~~~~--~g~~vavK~~~~~~~~~~--------------------~~~~~~~~~~~~~  148 (365)
T 2y7j_A           91 EFYQKYDPKDVIGRGVSSVVRRCVHRA--TGHEFAVKIMEVTAERLS--------------------PEQLEEVREATRR  148 (365)
T ss_dssp             HHHHHEEEEEEEEECSSEEEEEEEETT--TCCEEEEEEEETTSSCCC--------------------HHHHHHHHHHHHH
T ss_pred             hhhhhcccceEEecCCCEEEEEEEECC--CCcEEEEEEEEccccccC--------------------HHHHHHHHHHHHH
Confidence            456789999999999999999999987  788999999975332110                    0011122345778


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHR  166 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~  166 (521)
                      |+.+++++    .+||||+++++++...+..|+||||+.|++|.+++.....+++..+..++.||+.||.|||+.||+||
T Consensus       149 E~~~l~~l----~~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~  224 (365)
T 2y7j_A          149 ETHILRQV----AGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHR  224 (365)
T ss_dssp             HHHHHHHH----TTCTTBCCEEEEEEBSSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred             HHHHHHHh----cCCCCEeEEEEEEeeCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence            99999887    37999999999999999999999999999999999988889999999999999999999999999999


Q ss_pred             cCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCccccccccccc------CCCCchhhhHHHHHHHHHHHhC
Q 009980          167 DLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQ------DRITSKSDMWSLGVILYILLSG  240 (521)
Q Consensus       167 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~~ll~g  240 (521)
                      ||||+||++   +.++.+||+|||++............+||+.|+|||++.+      ..++.++|||||||++|+|++|
T Consensus       225 Dlkp~NIl~---~~~~~ikl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g  301 (365)
T 2y7j_A          225 DLKPENILL---DDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG  301 (365)
T ss_dssp             CCSGGGEEE---CTTCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHS
T ss_pred             CCCHHHEEE---CCCCCEEEEecCcccccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHC
Confidence            999999999   7788999999999987665555566789999999999863      3588999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCccc
Q 009980          241 YPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVI  303 (521)
Q Consensus       241 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~  303 (521)
                      .+||.+.+.......+..+...+..+.|..+|+.+.+||.+||..||.+|||+.++|+||||+
T Consensus       302 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~f~  364 (365)
T 2y7j_A          302 SPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFE  364 (365)
T ss_dssp             SCSSCCSSHHHHHHHHHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGC
T ss_pred             CCCCCCCCHHHHHHHHHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcccC
Confidence            999999888888888999988888888889999999999999999999999999999999996

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=4.8e-50  Score=404.65  Aligned_cols=267  Identities=29%  Similarity=0.432  Sum_probs=210.4

Q ss_pred             CccccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccH
Q 009980            2 GQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSD   81 (521)
Q Consensus         2 ~~~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (521)
                      |+..+.+.++|++.+.||+|+||.||+|.++.  +++.||||++.+....                          ....
T Consensus         1 G~v~~~~~~~y~~~~~lG~G~~g~V~~~~~~~--~~~~vaiK~i~~~~~~--------------------------~~~~   52 (388)
T 3oz6_A            1 GRVDRHVLRKYELVKKLGKGAYGIVWKSIDRR--TGEVVAVKKIFDAFQN--------------------------STDA   52 (388)
T ss_dssp             ---CHHHHTTEEEEEC-------CEEEEEETT--TCCEEEEEEECC--CC--------------------------HHHH
T ss_pred             CCccCcccCceEEEEEeeeCCCeEEEEEEECC--CCCEEEEEEecccccC--------------------------hHHH
Confidence            45667788999999999999999999999988  7889999998642111                          1233


Q ss_pred             HHHHHHHHHHHHHhhccCCCCCccceeEEEEeCC--eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 009980           82 ALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQN--GVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALH  159 (521)
Q Consensus        82 ~~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~--~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH  159 (521)
                      ....+|+.+++++    .+||||+++++++..++  .+|+|||||.| +|.+.+.. ..+++..+..++.||+.||.|||
T Consensus        53 ~~~~~E~~~l~~l----~~h~niv~l~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~-~~~~~~~~~~i~~qi~~~L~~LH  126 (388)
T 3oz6_A           53 QRTFREIMILTEL----SGHENIVNLLNVLRADNDRDVYLVFDYMET-DLHAVIRA-NILEPVHKQYVVYQLIKVIKYLH  126 (388)
T ss_dssp             HHHHHHHHHHHHT----TTCTTBCCEEEEEECTTSSCEEEEEECCSE-EHHHHHHH-TCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhc----cCCCCCCeeeeEEecCCCCEEEEEecccCc-CHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH
Confidence            4577899999988    24999999999998654  79999999974 89888876 57999999999999999999999


Q ss_pred             HCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCC----------------------CCCcccccCCcccccccccc
Q 009980          160 QANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGY----------------------TDPVVGLFGSIDYVSPEALL  217 (521)
Q Consensus       160 ~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~----------------------~~~~~~~~gt~~y~aPE~~~  217 (521)
                      ++||+||||||+|||+   +.++.+||+|||+|+....                      .......+||+.|+|||++.
T Consensus       127 ~~~ivHrDlkp~NIll---~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  203 (388)
T 3oz6_A          127 SGGLLHRDMKPSNILL---NAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILL  203 (388)
T ss_dssp             HTTEECCCCCGGGEEE---CTTCCEEECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHT
T ss_pred             hCCEEeCCCCHHHeEE---cCCCCEEecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhc
Confidence            9999999999999999   7788999999999975422                      11223457999999999997


Q ss_pred             c-CCCCchhhhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHcCCCCCchh------------------------------
Q 009980          218 Q-DRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQ------------------------------  266 (521)
Q Consensus       218 ~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~------------------------------  266 (521)
                      + ..|+.++||||+||++|+|++|++||.+.+.......+......+...                              
T Consensus       204 ~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (388)
T 3oz6_A          204 GSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRD  283 (388)
T ss_dssp             TCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCC
T ss_pred             CCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHH
Confidence            6 678999999999999999999999999988777766665321111100                              


Q ss_pred             -------------hhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCC
Q 009980          267 -------------TWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGD  305 (521)
Q Consensus       267 -------------~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~  305 (521)
                                   .+..+++++.+||.+||..||.+|||++++|+||||...
T Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e~l~Hp~~~~~  335 (388)
T 3oz6_A          284 IFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIF  335 (388)
T ss_dssp             CHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSTTTTTT
T ss_pred             hCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCHHHHhCCHHHHHh
Confidence                         012678999999999999999999999999999999753

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=4e-50  Score=413.04  Aligned_cols=260  Identities=27%  Similarity=0.394  Sum_probs=212.0

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      -.+.++|++++.||+|+||+||+|+++.  +++.||||++.+....                          ......+.
T Consensus        58 ~~~~~~y~~~~~lG~G~~g~V~~a~~~~--~~~~vAiK~~~~~~~~--------------------------~~~~~~~~  109 (464)
T 3ttj_A           58 FTVLKRYQNLKPIGSGAQGIVCAAYDAV--LDRNVAIKKLSRPFQN--------------------------QTHAKRAY  109 (464)
T ss_dssp             EEEETTEEEEEEEEECSSCEEEEEEETT--TTEEEEEEEEESGGGS--------------------------HHHHHHHH
T ss_pred             eeecCCeEEEEEeecCCCeEEEEEEECC--CCCEEEEEEECccccC--------------------------hHHHHHHH
Confidence            3567899999999999999999999998  7889999999753211                          12345578


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeC------CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQ------NGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALH  159 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~------~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH  159 (521)
                      +|+.+++.+     +||||+++++++...      ..+|+||||+.| +|.+.+.  ..+++..++.++.||+.||.|||
T Consensus       110 ~E~~~l~~l-----~hpnIv~l~~~~~~~~~~~~~~~~~lv~E~~~~-~l~~~~~--~~l~~~~~~~~~~qil~aL~~lH  181 (464)
T 3ttj_A          110 RELVLMKCV-----NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQ--MELDHERMSYLLYQMLCGIKHLH  181 (464)
T ss_dssp             HHHHHHHHC-----CCTTBCCCSEEECSCCSTTTCCEEEEEEECCSE-EHHHHHT--SCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhC-----CCCCCCcEEEEEccCCccccCCeEEEEEeCCCC-CHHHHHh--hcCCHHHHHHHHHHHHHHHHHHH
Confidence            999999998     999999999999655      467999999977 5666664  35999999999999999999999


Q ss_pred             HCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh
Q 009980          160 QANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS  239 (521)
Q Consensus       160 ~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~  239 (521)
                      ++||+||||||+|||+   +.++.+||+|||+|+...........+||+.|+|||++.+..|+.++|||||||++|+|++
T Consensus       182 ~~~iiHrDlkp~NIll---~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~  258 (464)
T 3ttj_A          182 SAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR  258 (464)
T ss_dssp             HTTCCCCCCCGGGEEE---CTTSCEEECCCCCC-----CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHH
T ss_pred             HCCcccCCCChHhEEE---eCCCCEEEEEEEeeeecCCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            9999999999999999   7788999999999987765555566789999999999999999999999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHHcCCCCCchhhh--------------------------------------hccCHHHHHHHHH
Q 009980          240 GYPPFIAQSNRQKQQMIMAGEFSFYEQTW--------------------------------------KNISSSAKQLISS  281 (521)
Q Consensus       240 g~~pf~~~~~~~~~~~i~~~~~~~~~~~~--------------------------------------~~~s~~~~~li~~  281 (521)
                      |++||.+.+..+....+......+....+                                      ...++++++||.+
T Consensus       259 g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~  338 (464)
T 3ttj_A          259 HKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSK  338 (464)
T ss_dssp             SSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHH
Confidence            99999998877766666543221111111                                      1126789999999


Q ss_pred             hccCCCCCCCCHHHHHcCCcccC
Q 009980          282 LLTVDPNRRPSAQELLNHPWVIG  304 (521)
Q Consensus       282 ~l~~dp~~R~t~~~~l~h~~~~~  304 (521)
                      ||..||.+|||++|+|+||||..
T Consensus       339 mL~~dP~~R~ta~e~L~Hp~~~~  361 (464)
T 3ttj_A          339 MLVIDPAKRISVDDALQHPYINV  361 (464)
T ss_dssp             HSCSSTTTSCCHHHHHTSTTTGG
T ss_pred             HcCCChhhCCCHHHHhcChhhhh
Confidence            99999999999999999999974

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=100.00  E-value=3.3e-49  Score=383.94  Aligned_cols=276  Identities=36%  Similarity=0.603  Sum_probs=238.3

Q ss_pred             ccccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHH
Q 009980            3 QETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDA   82 (521)
Q Consensus         3 ~~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (521)
                      +....+.++|++.+.||+|+||.||+|+++.  +++.||||++........                   ..........
T Consensus        10 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~--~~~~vavK~~~~~~~~~~-------------------~~~~~~~~~~   68 (298)
T 1phk_A           10 HSTHGFYENYEPKEILGRGVSSVVRRCIHKP--TCKEYAVKIIDVTGGGSF-------------------SAEEVQELRE   68 (298)
T ss_dssp             -----CTTTEEEEEEEEECSSEEEEEEEETT--TTEEEEEEEEETTCSTTC-------------------CHHHHHHHHH
T ss_pred             cCCcchhhccceeeeecCCCceEEEEEEEcC--cCceEEEEEEeccccccc-------------------CHHHHHHHHH
Confidence            4456788999999999999999999999987  788999999975432110                   0011112234


Q ss_pred             HHHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 009980           83 LLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQAN  162 (521)
Q Consensus        83 ~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~  162 (521)
                      .+.+|+.+++++    .+||||+++++++..++..|+||||+.|++|.+++.....+++..+..++.||+.||.|||++|
T Consensus        69 ~~~~e~~~l~~l----~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  144 (298)
T 1phk_A           69 ATLKEVDILRKV----SGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN  144 (298)
T ss_dssp             HHHHHHHHHHHH----TTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHh----cCCCCEeeeeeeeccCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            577899999998    2499999999999999999999999999999999998889999999999999999999999999


Q ss_pred             CeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccc------cCCCCchhhhHHHHHHHHH
Q 009980          163 IVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALL------QDRITSKSDMWSLGVILYI  236 (521)
Q Consensus       163 i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DiwslG~il~~  236 (521)
                      |+||||||+||++   +.++.+||+|||++.............||+.|+|||++.      ...++.++||||||+++|+
T Consensus       145 i~H~dl~p~Nil~---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~  221 (298)
T 1phk_A          145 IVHRDLKPENILL---DDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYT  221 (298)
T ss_dssp             EECSCCSGGGEEE---CTTCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHH
T ss_pred             cccCCCCcceEEE---cCCCcEEEecccchhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHH
Confidence            9999999999999   778899999999998766555555667999999999985      4568899999999999999


Q ss_pred             HHhCCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCC
Q 009980          237 LLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDS  306 (521)
Q Consensus       237 ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~  306 (521)
                      |++|..||.+.+.......+..+...++.+.+..+|+.+.+||.+||..||.+|||+.++++||||.+..
T Consensus       222 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  291 (298)
T 1phk_A          222 LLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYV  291 (298)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTTC
T ss_pred             HHHCCCCCcCccHHHHHHHHhcCCcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhChHhhhcc
Confidence            9999999999888888888888888887777888999999999999999999999999999999998643

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=100.00  E-value=3.9e-50  Score=412.46  Aligned_cols=260  Identities=29%  Similarity=0.455  Sum_probs=222.1

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      ...++|++.+.||+|+||.||+|+++.  +++.||||++.+......                         .....+.+
T Consensus       145 ~~~~~y~~~~~lG~G~~g~V~~~~~~~--~~~~vaiK~~~~~~~~~~-------------------------~~~~~~~~  197 (446)
T 4ejn_A          145 VTMNEFEYLKLLGKGTFGKVILVKEKA--TGRYYAMKILKKEVIVAK-------------------------DEVAHTLT  197 (446)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEETT--TCCEEEEEEEEHHHHC-----------------------------------
T ss_pred             CChHHcEEeEEEeeCcCEEEEEEEEcC--CCCEEEEEEEEhhhhhhh-------------------------HHHHHHHH
Confidence            345789999999999999999999988  889999999975422110                         11223567


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCCee
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ-ANIVH  165 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~-~~i~H  165 (521)
                      |+.+++.+     +||||+++++++.+.+.+|+||||++||+|.+++...+.+++..+..++.||+.||.|||+ +||+|
T Consensus       198 e~~~l~~l-----~h~~iv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~giiH  272 (446)
T 4ejn_A          198 ENRVLQNS-----RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVY  272 (446)
T ss_dssp             ---CCCCC-----SCTTSCCEEEEEEETTEEEEEECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred             HHHHHHhC-----CCCeEeeEEEEEeeCCEEEEEEeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEE
Confidence            88877776     8999999999999999999999999999999999988899999999999999999999998 99999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCC-CCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCC
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEG-YTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF  244 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf  244 (521)
                      |||||+|||+   +.++.+||+|||+|+... ........+||+.|+|||++.+..|+.++|||||||++|+|++|.+||
T Consensus       273 rDlkp~NIll---~~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf  349 (446)
T 4ejn_A          273 RDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF  349 (446)
T ss_dssp             CCCCGGGEEE---CSSSCEEECCCCCCCTTCC-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred             CCCCHHHEEE---CCCCCEEEccCCCceeccCCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCC
Confidence            9999999999   778899999999998633 223345568999999999999999999999999999999999999999


Q ss_pred             CCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCC-----CHHHHHcCCcccCC
Q 009980          245 IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRP-----SAQELLNHPWVIGD  305 (521)
Q Consensus       245 ~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~-----t~~~~l~h~~~~~~  305 (521)
                      .+.+.......+......++    ..+++++++||.+||..||.+||     |++++++||||.+.
T Consensus       350 ~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~~  411 (446)
T 4ejn_A          350 YNQDHEKLFELILMEEIRFP----RTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGI  411 (446)
T ss_dssp             CCSSHHHHHHHHHHCCCCCC----TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred             CCCCHHHHHHHHHhCCCCCC----ccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCccccCC
Confidence            99999888888888877665    45899999999999999999999     99999999999864

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=100.00  E-value=4.7e-50  Score=405.02  Aligned_cols=265  Identities=26%  Similarity=0.388  Sum_probs=224.9

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      +...++|++.+.||+|+||.||+|+++.  +++.||||++++.....                         ......+.
T Consensus        57 ~~~~~~f~~~~~lG~G~fG~V~~~~~~~--~~~~vAiK~l~k~~~~~-------------------------~~~~~~~~  109 (412)
T 2vd5_A           57 RLQRDDFEILKVIGRGAFSEVAVVKMKQ--TGQVYAMKIMNKWDMLK-------------------------RGEVSCFR  109 (412)
T ss_dssp             SCCGGGEEEEEEEEECSSCEEEEEEETT--TCCEEEEEEEEHHHHHH-------------------------HGGGCCHH
T ss_pred             cCChhhEEEEEEEeeCCCeEEEEEEECC--CCCEEEEEEEeHHHhhh-------------------------HHHHHHHH
Confidence            4456899999999999999999999987  88999999997532110                         01123477


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQANIV  164 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~~~i~  164 (521)
                      +|..++..+     +||||+++++++.+.+.+|+|||||.||+|.+++.+. ..+++..++.++.||+.||.|||++||+
T Consensus       110 ~E~~il~~~-----~hp~Iv~l~~~~~~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~gii  184 (412)
T 2vd5_A          110 EERDVLVNG-----DRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYV  184 (412)
T ss_dssp             HHHHHHHHS-----CTTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHhc-----CCCCeeeEEEEEeeCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence            899999888     9999999999999999999999999999999999875 4799999999999999999999999999


Q ss_pred             eccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC--cccccCCcccccccccc-------cCCCCchhhhHHHHHHHH
Q 009980          165 HRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP--VVGLFGSIDYVSPEALL-------QDRITSKSDMWSLGVILY  235 (521)
Q Consensus       165 H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~-------~~~~~~~~DiwslG~il~  235 (521)
                      ||||||+|||+   +.++.+||+|||+|+.......  ....+||+.|+|||++.       ...|+.++|||||||++|
T Consensus       185 HrDLKp~NILl---d~~g~vkL~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvily  261 (412)
T 2vd5_A          185 HRDIKPDNILL---DRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAY  261 (412)
T ss_dssp             CCCCSGGGEEE---CTTSCEEECCCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHH
T ss_pred             ecccCHHHeee---cCCCCEEEeechhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHH
Confidence            99999999999   7889999999999986544332  23458999999999997       356899999999999999


Q ss_pred             HHHhCCCCCCCCCcHHHHHHHHcCC--CCCchhhhhccCHHHHHHHHHhccCCCCCC---CCHHHHHcCCcccCCCC
Q 009980          236 ILLSGYPPFIAQSNRQKQQMIMAGE--FSFYEQTWKNISSSAKQLISSLLTVDPNRR---PSAQELLNHPWVIGDSA  307 (521)
Q Consensus       236 ~ll~g~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~s~~~~~li~~~l~~dp~~R---~t~~~~l~h~~~~~~~~  307 (521)
                      +|++|++||.+.+..+....+....  ..++ .....+|+++++||.+||. +|.+|   |+++++++||||.+...
T Consensus       262 elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p-~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~i~w  336 (412)
T 2vd5_A          262 EMFYGQTPFYADSTAETYGKIVHYKEHLSLP-LVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFGLDW  336 (412)
T ss_dssp             HHHHSSCTTCCSSHHHHHHHHHTHHHHCCCC-----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTTCCS
T ss_pred             HHHhCCCCCCCCCHHHHHHHHHhcccCcCCC-ccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCCCCH
Confidence            9999999999999888888887643  2222 1235689999999999999 99998   59999999999986544

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=100.00  E-value=1.1e-49  Score=391.85  Aligned_cols=276  Identities=34%  Similarity=0.618  Sum_probs=228.8

Q ss_pred             CCccccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCcccccccccccccc
Q 009980            1 MGQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVS   80 (521)
Q Consensus         1 ~~~~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (521)
                      |.-....+.++|++.+.||+|+||.||+|+++.  +++.||||++.+.......                    ......
T Consensus         1 M~~~~~~l~~~y~~~~~lg~G~~g~V~~~~~~~--~~~~vavK~~~~~~~~~~~--------------------~~~~~~   58 (322)
T 2ycf_A            1 MSVYPKALRDEYIMSKTLGSGACGEVKLAFERK--TCKKVAIKIISKRKFAIGS--------------------AREADP   58 (322)
T ss_dssp             -CCCCHHHHHHEEEEEEEEECSSEEEEEEEETT--TTEEEEEEEECC---------------------------------
T ss_pred             CccchhhhhhceeEeeEEecCCCEEEEEEEEcC--CCcEEEEEEeehhhhhhcc--------------------cccchh
Confidence            444566788999999999999999999999987  7889999999754321100                    000011


Q ss_pred             HHHHHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Q 009980           81 DALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ  160 (521)
Q Consensus        81 ~~~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~  160 (521)
                      ...+.+|+.+++++     +||||+++++++..++ +|+||||+.|++|.+++.....+++..+..++.||+.||.|||+
T Consensus        59 ~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~~~-~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~  132 (322)
T 2ycf_A           59 ALNVETEIEILKKL-----NHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE  132 (322)
T ss_dssp             --CHHHHHHHHHHC-----CCTTBCCEEEEEESSS-EEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhHHHHHHHHHhC-----CCCCCceEeeEEcCCc-eEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            23478899999998     9999999999997665 89999999999999999888899999999999999999999999


Q ss_pred             CCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccc---cCCCCchhhhHHHHHHHHHH
Q 009980          161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALL---QDRITSKSDMWSLGVILYIL  237 (521)
Q Consensus       161 ~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~~l  237 (521)
                      +||+||||||+||++..++....+||+|||++.............||+.|+|||++.   ...++.++|||||||++|+|
T Consensus       133 ~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l  212 (322)
T 2ycf_A          133 NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC  212 (322)
T ss_dssp             TTEECCCCSGGGEEESSSSSSCCEEECCCTTCEECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHH
T ss_pred             CCeeccCCCHHHEEEecCCCCCeEEEccCccceecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHH
Confidence            999999999999999544445569999999998765443334557999999999974   46789999999999999999


Q ss_pred             HhCCCCCCCCCcH-HHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccC
Q 009980          238 LSGYPPFIAQSNR-QKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIG  304 (521)
Q Consensus       238 l~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~  304 (521)
                      ++|.+||...... .....+..+...+....+..+++.+.+||.+||..||.+|||+.++|+||||..
T Consensus       213 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~~  280 (322)
T 2ycf_A          213 LSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD  280 (322)
T ss_dssp             HHSSCSSCSTTCSSCHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGCC
T ss_pred             HhCCCCCcccchHHHHHHHHHhCccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhCcCcCC
Confidence            9999999765543 455667777777777777889999999999999999999999999999999974

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=100.00  E-value=2.7e-49  Score=387.08  Aligned_cols=263  Identities=27%  Similarity=0.432  Sum_probs=216.8

Q ss_pred             cccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      +.++|++.+.||+|+||.||+|+++.  +++.||||++......                          ......+.+|
T Consensus         1 l~~~y~~~~~lg~G~~g~V~~~~~~~--~~~~vavK~~~~~~~~--------------------------~~~~~~~~~E   52 (311)
T 4agu_A            1 MMEKYEKIGKIGEGSYGVVFKCRNRD--TGQIVAIKKFLESEDD--------------------------PVIKKIALRE   52 (311)
T ss_dssp             --CCEEEEEEEEECSSEEEEEEEETT--TCCEEEEEEECCCCC---------------------------HHHHHHHHHH
T ss_pred             CcccceEeeEEeecCCeEEEEEEeCC--CCcEEEEEEeeccccc--------------------------hHHHHHHHHH
Confidence            35789999999999999999999987  7889999998643211                          1223557789


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecc
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRD  167 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~d  167 (521)
                      +.+++++     +||||+++++++.+.+..|+||||+.|++|.+++...+.+++..+..++.|++.||.|||++||+|||
T Consensus        53 ~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~d  127 (311)
T 4agu_A           53 IRMLKQL-----KHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRD  127 (311)
T ss_dssp             HHHHHHC-----CCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             HHHHHhC-----CCCCccchhheeecCCeEEEEEEeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCC
Confidence            9999998     99999999999999999999999999999999988888899999999999999999999999999999


Q ss_pred             CCCCcEEEeeCCCCCCEEEeecCCCccCCCC-CCcccccCCccccccccccc-CCCCchhhhHHHHHHHHHHHhCCCCCC
Q 009980          168 LKPENCLFLNDREDSPLKIMDFGLSSVEGYT-DPVVGLFGSIDYVSPEALLQ-DRITSKSDMWSLGVILYILLSGYPPFI  245 (521)
Q Consensus       168 lkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~ll~g~~pf~  245 (521)
                      |||+||++   +.++.+||+|||++...... .......||+.|+|||++.+ ..++.++||||+|+++|+|++|.+||.
T Consensus       128 lkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~  204 (311)
T 4agu_A          128 VKPENILI---TKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWP  204 (311)
T ss_dssp             CSGGGEEE---CTTSCEEECCCTTCEECC------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             CChhhEEE---cCCCCEEEeeCCCchhccCcccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCC
Confidence            99999999   77889999999999865432 22345579999999999876 568999999999999999999999999


Q ss_pred             CCCcHHHHHHHHcCCCCC---------------------------chhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          246 AQSNRQKQQMIMAGEFSF---------------------------YEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       246 ~~~~~~~~~~i~~~~~~~---------------------------~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      +.+..+....+.......                           ....++.+|+.+.+||.+||..||.+|||++++|+
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  284 (311)
T 4agu_A          205 GKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH  284 (311)
T ss_dssp             CSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred             CCCHHHHHHHHHHHhcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence            888776655443321110                           11123568999999999999999999999999999


Q ss_pred             CCcccCCC
Q 009980          299 HPWVIGDS  306 (521)
Q Consensus       299 h~~~~~~~  306 (521)
                      ||||++..
T Consensus       285 hp~f~~~~  292 (311)
T 4agu_A          285 HPYFENIR  292 (311)
T ss_dssp             SGGGTTCC
T ss_pred             ChHHHhcc
Confidence            99998643

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=100.00  E-value=1e-49  Score=385.65  Aligned_cols=257  Identities=26%  Similarity=0.429  Sum_probs=212.3

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ++|++.+.||+|+||.||+|++.   +++.||||++.......                          .....+.+|+.
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~---~~~~~aiK~~~~~~~~~--------------------------~~~~~~~~E~~   52 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQNN---YGETFALKKIRLEKEDE--------------------------GIPSTTIREIS   52 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEET---TSCEEEEEEECCSSGGG--------------------------CCCHHHHHHHH
T ss_pred             ccchhhhhcccCCCEEEEEEEcC---CCCEEEEEEEecccccc--------------------------ccchhHHHHHH
Confidence            68999999999999999999984   67899999986432211                          11245778999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQANIVHRDL  168 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~~~i~H~dl  168 (521)
                      +++++     +||||+++++++.+.+.+|+||||+.+ +|.+++... +.+++..+..++.||+.||.|||++||+||||
T Consensus        53 ~l~~l-----~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl  126 (288)
T 1ob3_A           53 ILKEL-----KHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDL  126 (288)
T ss_dssp             GGGGC-----CCTTBCCEEEEEECSSCEEEEEECCSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             HHHhc-----CCCCEeeeeeEEccCCeEEEEEEecCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence            99988     999999999999999999999999986 898888764 67999999999999999999999999999999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCccCCCC-CCcccccCCcccccccccccC-CCCchhhhHHHHHHHHHHHhCCCCCCC
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSSVEGYT-DPVVGLFGSIDYVSPEALLQD-RITSKSDMWSLGVILYILLSGYPPFIA  246 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~  246 (521)
                      ||+||++   +.++.+||+|||++...... .......||+.|+|||++.+. .++.++|||||||++|+|++|.+||.+
T Consensus       127 kp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~  203 (288)
T 1ob3_A          127 KPQNLLI---NREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPG  203 (288)
T ss_dssp             CGGGEEE---CTTSCEEECCTTHHHHHCC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             CHHHEEE---cCCCCEEEeECccccccCccccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence            9999999   77889999999999764322 223445789999999999754 589999999999999999999999998


Q ss_pred             CCcHHHHHHHHcCCCCCc-------------------------hhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCc
Q 009980          247 QSNRQKQQMIMAGEFSFY-------------------------EQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPW  301 (521)
Q Consensus       247 ~~~~~~~~~i~~~~~~~~-------------------------~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~  301 (521)
                      .+..+....+........                         ...+..+++++++||.+||..||.+|||+.++|+|||
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~  283 (288)
T 1ob3_A          204 VSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAY  283 (288)
T ss_dssp             SSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGG
T ss_pred             CCHHHHHHHHHHHHCCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCcc
Confidence            887766665543211100                         1122458999999999999999999999999999999


Q ss_pred             ccC
Q 009980          302 VIG  304 (521)
Q Consensus       302 ~~~  304 (521)
                      |+.
T Consensus       284 f~~  286 (288)
T 1ob3_A          284 FKE  286 (288)
T ss_dssp             GGC
T ss_pred             hhh
Confidence            975

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=100.00  E-value=3e-49  Score=394.88  Aligned_cols=267  Identities=23%  Similarity=0.321  Sum_probs=223.4

Q ss_pred             ccccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHH
Q 009980            3 QETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDA   82 (521)
Q Consensus         3 ~~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (521)
                      +.+..+.++|++.+.||+|+||.||+|+++.  +++.||||++....                             ....
T Consensus        28 ~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~--~~~~vavK~~~~~~-----------------------------~~~~   76 (360)
T 3llt_A           28 KKGMLLNNAFLVIRKMGDGTFGRVLLCQHID--NKKYYAVKVVRNIK-----------------------------KYTR   76 (360)
T ss_dssp             CTTCEETTTEEEEEEEEECSSEEEEEEEETT--TCCEEEEEEECSCH-----------------------------HHHH
T ss_pred             ecceEecCEEEEEEEEcccCCeEEEEEEECC--CCeEEEEEEeccch-----------------------------hhhh
Confidence            4567788999999999999999999999987  78899999985311                             1234


Q ss_pred             HHHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH
Q 009980           83 LLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE--RYMEVGAAAVIRQIAEGLAALHQ  160 (521)
Q Consensus        83 ~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~al~~lH~  160 (521)
                      ....|+.+++.+......||||+++++++...+..|+||||+ |++|.+++....  .+++..+..++.||+.||.|||+
T Consensus        77 ~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~  155 (360)
T 3llt_A           77 SAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRK  155 (360)
T ss_dssp             HHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            467799999988433335999999999999999999999999 889999998754  59999999999999999999999


Q ss_pred             CCCeeccCCCCcEEEeeC----------------------CCCCCEEEeecCCCccCCCCCCcccccCCccccccccccc
Q 009980          161 ANIVHRDLKPENCLFLND----------------------REDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQ  218 (521)
Q Consensus       161 ~~i~H~dlkp~Nil~~~~----------------------~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~  218 (521)
                      +||+||||||+|||+...                      ...+.+||+|||+|+....  ......||+.|+|||++.+
T Consensus       156 ~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~--~~~~~~gt~~y~aPE~~~~  233 (360)
T 3llt_A          156 MSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSD--YHGSIINTRQYRAPEVILN  233 (360)
T ss_dssp             TTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTS--CCCSCCSCGGGCCHHHHTT
T ss_pred             CCeeeCCCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCceecCC--CCcCccCcccccCcHHHcC
Confidence            999999999999999321                      1267899999999986443  2345679999999999999


Q ss_pred             CCCCchhhhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHcCCCCCchhhh------------------------------
Q 009980          219 DRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTW------------------------------  268 (521)
Q Consensus       219 ~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~------------------------------  268 (521)
                      ..++.++|||||||++|+|++|++||.+.+..+....+.....+++...+                              
T Consensus       234 ~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  313 (360)
T 3llt_A          234 LGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINS  313 (360)
T ss_dssp             CCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHH
T ss_pred             CCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhh
Confidence            99999999999999999999999999988877776666554333332111                              


Q ss_pred             ------------hccCHHHHHHHHHhccCCCCCCCCHHHHHcCCccc
Q 009980          269 ------------KNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVI  303 (521)
Q Consensus       269 ------------~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~  303 (521)
                                  ...++.+.+||.+||+.||.+|||+.++|+||||+
T Consensus       314 ~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~hp~f~  360 (360)
T 3llt_A          314 IKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFLE  360 (360)
T ss_dssp             HHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred             hhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence                        11247788999999999999999999999999985

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=100.00  E-value=4.2e-50  Score=417.67  Aligned_cols=260  Identities=29%  Similarity=0.470  Sum_probs=227.0

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      ...++|++.+.||+|+||.||+|+++.  +++.||||++.+.....                         ......+.+
T Consensus       181 ~~~~~f~~~~~LG~G~fG~Vy~a~~~~--tg~~vAvK~l~k~~~~~-------------------------~~~~~~~~~  233 (576)
T 2acx_A          181 VTKNTFRQYRVLGKGGFGEVCACQVRA--TGKMYACKKLEKKRIKK-------------------------RKGEAMALN  233 (576)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEETT--TCCEEEEEEEEHHHHHH-------------------------TTCHHHHHH
T ss_pred             ccccceEEEEEEeeCCCEEEEEEEECC--CCCEEEEEEEEhHhhhh-------------------------hHHHHHHHH
Confidence            456789999999999999999999988  78999999997532211                         112345788


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCCe
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQER--YMEVGAAAVIRQIAEGLAALHQANIV  164 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~--~~~~~~~~i~~qil~al~~lH~~~i~  164 (521)
                      |+.+++++     +||||+++++++.+.+.+|+||||+.||+|.+++...+.  +++..++.++.||+.||.|||++||+
T Consensus       234 E~~iL~~l-----~hp~Iv~l~~~~~~~~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIv  308 (576)
T 2acx_A          234 EKQILEKV-----NSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIV  308 (576)
T ss_dssp             HHHHHHHC-----CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHc-----CCCCEeeEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence            99999998     999999999999999999999999999999999987544  99999999999999999999999999


Q ss_pred             eccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCC
Q 009980          165 HRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF  244 (521)
Q Consensus       165 H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf  244 (521)
                      ||||||+|||+   +.++.+||+|||+|+...........+||+.|+|||++.+..|+.++|||||||++|+|++|.+||
T Consensus       309 HrDLKPeNILl---d~~g~vKL~DFGla~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF  385 (576)
T 2acx_A          309 YRDLKPENILL---DDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPF  385 (576)
T ss_dssp             CCCCCGGGEEE---CTTSCEEECCCTTCEECCTTCCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSS
T ss_pred             ccCCchheEEE---eCCCCeEEEecccceecccCccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCC
Confidence            99999999999   778899999999998766555556678999999999999989999999999999999999999999


Q ss_pred             CCCC----cHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCC-----CHHHHHcCCcccCC
Q 009980          245 IAQS----NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRP-----SAQELLNHPWVIGD  305 (521)
Q Consensus       245 ~~~~----~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~-----t~~~~l~h~~~~~~  305 (521)
                      .+.+    ...+...+......++    ..+|+++++||.+||..||.+||     |++++++||||.+.
T Consensus       386 ~~~~~~~~~~~i~~~i~~~~~~~p----~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~i  451 (576)
T 2acx_A          386 QQRKKKIKREEVERLVKEVPEEYS----ERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKL  451 (576)
T ss_dssp             SCSSSCCCHHHHHHHHHHCCCCCC----TTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTTC
T ss_pred             cccccchhHHHHHHHhhcccccCC----ccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhccC
Confidence            8764    2445555665554443    56899999999999999999999     89999999999864

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=100.00  E-value=1.5e-49  Score=384.20  Aligned_cols=265  Identities=35%  Similarity=0.678  Sum_probs=235.9

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      ..+.++|++.+.||+|+||.||+|+++.  +++.||||++.+.....                          .....+.
T Consensus        18 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~--~~~~valK~~~~~~~~~--------------------------~~~~~~~   69 (287)
T 2wei_A           18 GTFAERYNIVCMLGKGSFGEVLKCKDRI--TQQEYAVKVINKASAKN--------------------------KDTSTIL   69 (287)
T ss_dssp             HHHHHHEEEEEEEEEETTEEEEEEEETT--TCCEEEEEEEEGGGBSS--------------------------SCHHHHH
T ss_pred             HHHhhcceeeEEEcCCCCEEEEEEEEcC--CCcEEEEEEecccccch--------------------------HHHHHHH
Confidence            3567899999999999999999999987  78899999997543221                          2245688


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      +|+.+++++     +||||+++++++.+.+..|+||||+.|++|.+.+.....+++..+..++.||+.||.|||++||+|
T Consensus        70 ~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H  144 (287)
T 2wei_A           70 REVELLKKL-----DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVH  144 (287)
T ss_dssp             HHHHHHHTC-----CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             HHHHHHHhc-----cCCCccEEEEEEeCCCeEEEEEEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence            999999998     999999999999999999999999999999999988889999999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCC
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFI  245 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~  245 (521)
                      |||||+||++...+....+||+|||++.............||+.|+|||++.+ .++.++||||||+++|+|++|..||.
T Consensus       145 ~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~  223 (287)
T 2wei_A          145 RDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFY  223 (287)
T ss_dssp             SCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCSSCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             cCCChhhEEEecCCCcccEEEeccCcceeecCCCccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCC
Confidence            99999999995544456799999999987655444455568999999999875 58999999999999999999999999


Q ss_pred             CCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccC
Q 009980          246 AQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIG  304 (521)
Q Consensus       246 ~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~  304 (521)
                      +.+..+....+..+...++.+.+..+|+++.++|.+||..||.+|||+.++|+||||..
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~~~~  282 (287)
T 2wei_A          224 GKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQK  282 (287)
T ss_dssp             CSSHHHHHHHHHHCCCCCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHH
T ss_pred             CCCHHHHHHHHHcCCCCCCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcCHHHhc
Confidence            99888888889888887777777889999999999999999999999999999999964

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=100.00  E-value=8.4e-50  Score=393.64  Aligned_cols=269  Identities=25%  Similarity=0.357  Sum_probs=214.7

Q ss_pred             ccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHH
Q 009980            5 TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALL   84 (521)
Q Consensus         5 ~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (521)
                      .....++|++.+.||+|+||+||+|+++.  +++.||||++.......                          .....+
T Consensus        29 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~--~~~~vaiK~~~~~~~~~--------------------------~~~~~~   80 (329)
T 3gbz_A           29 SATSIDRYRRITKLGEGTYGEVYKAIDTV--TNETVAIKRIRLEHEEE--------------------------GVPGTA   80 (329)
T ss_dssp             ---CGGGEEEEEEEEECSSSEEEEEEETT--TTEEEEEEECCCCC----------------------------------C
T ss_pred             cccchhhEEEEEEEEecCCeEEEEEEECC--CCceEEEEEEccccccc--------------------------ccchhH
Confidence            44567899999999999999999999988  78999999986532211                          112335


Q ss_pred             HHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 009980           85 TNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIV  164 (521)
Q Consensus        85 ~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~  164 (521)
                      .+|+.+++++     +||||+++++++.+++.+|+||||+.| +|.+++...+.+++..++.++.||+.||.|||++||+
T Consensus        81 ~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~iv  154 (329)
T 3gbz_A           81 IREVSLLKEL-----QHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCL  154 (329)
T ss_dssp             HHHHHHGGGC-----CCTTBCCEEEEEEETTEEEEEEECCSE-EHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHc-----CCCCcceEEEEEecCCEEEEEEecCCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEE
Confidence            6899999988     999999999999999999999999975 9999999988999999999999999999999999999


Q ss_pred             eccCCCCcEEEeeC--CCCCCEEEeecCCCccCCCC-CCcccccCCcccccccccccC-CCCchhhhHHHHHHHHHHHhC
Q 009980          165 HRDLKPENCLFLND--REDSPLKIMDFGLSSVEGYT-DPVVGLFGSIDYVSPEALLQD-RITSKSDMWSLGVILYILLSG  240 (521)
Q Consensus       165 H~dlkp~Nil~~~~--~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~~ll~g  240 (521)
                      ||||||+|||+..+  +..+.+||+|||+|+..... ......+||+.|+|||++.+. .++.++|||||||++|+|++|
T Consensus       155 H~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g  234 (329)
T 3gbz_A          155 HRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMK  234 (329)
T ss_dssp             CSCCCGGGEEEEC-----CCEEEECCTTHHHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHS
T ss_pred             CCCCCHHHEEEecCCCCccceEEECcCCCccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHC
Confidence            99999999999543  23456999999999764322 233445789999999999864 489999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHHcCCCCCchhh--------------------------hhccCHHHHHHHHHhccCCCCCCCCHH
Q 009980          241 YPPFIAQSNRQKQQMIMAGEFSFYEQT--------------------------WKNISSSAKQLISSLLTVDPNRRPSAQ  294 (521)
Q Consensus       241 ~~pf~~~~~~~~~~~i~~~~~~~~~~~--------------------------~~~~s~~~~~li~~~l~~dp~~R~t~~  294 (521)
                      .+||.+.+..+....+......+....                          ...+++++++||.+||..||.+|||+.
T Consensus       235 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~  314 (329)
T 3gbz_A          235 TPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAK  314 (329)
T ss_dssp             SCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             CCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHH
Confidence            999998887777666654321111111                          122789999999999999999999999


Q ss_pred             HHHcCCcccCCCC
Q 009980          295 ELLNHPWVIGDSA  307 (521)
Q Consensus       295 ~~l~h~~~~~~~~  307 (521)
                      ++|+||||++...
T Consensus       315 e~l~hp~f~~~~~  327 (329)
T 3gbz_A          315 NALEHPYFSHNDF  327 (329)
T ss_dssp             HHHTSGGGSSSCS
T ss_pred             HHhCCcccCCCCC
Confidence            9999999987543

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=100.00  E-value=4.9e-49  Score=397.44  Aligned_cols=264  Identities=21%  Similarity=0.304  Sum_probs=217.7

Q ss_pred             ccccceeeccccccc--CceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHH
Q 009980            7 KLTDEYEVTDILGRG--GFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALL   84 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G--~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (521)
                      .-.++|++++.||+|  +||.||+|+++.  +++.||||++......                          ......+
T Consensus        22 ~~~~~y~~~~~lG~G~~~~g~V~~~~~~~--~~~~vavK~~~~~~~~--------------------------~~~~~~~   73 (389)
T 3gni_B           22 PEGGCYELLTVIGKGFEDLMTVNLARYKP--TGEYVTVRRINLEACS--------------------------NEMVTFL   73 (389)
T ss_dssp             CCGGGEEEEEEEEEETTTTEEEEEEEETT--TCCEEEEEEEEGGGSC--------------------------HHHHHHH
T ss_pred             CCCCcEEEEecccCCcCCceEEEEEEEcC--CCCEEEEEEecccccC--------------------------hHHHHHH
Confidence            456799999999999  999999999998  7899999999754321                          1223557


Q ss_pred             HHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC
Q 009980           85 TNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ--ERYMEVGAAAVIRQIAEGLAALHQAN  162 (521)
Q Consensus        85 ~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~al~~lH~~~  162 (521)
                      .+|+.+++++     +||||+++++++.+++.+|+|||||.||+|.+++...  ..+++..++.++.||+.||.|||++|
T Consensus        74 ~~E~~~l~~l-----~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~  148 (389)
T 3gni_B           74 QGELHVSKLF-----NHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMG  148 (389)
T ss_dssp             HHHHHHHHHC-----CCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHhC-----CCCCCCcEeEEEEECCEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            8899999998     9999999999999999999999999999999999875  67999999999999999999999999


Q ss_pred             CeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCC--------CCCcccccCCccccccccccc--CCCCchhhhHHHHH
Q 009980          163 IVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGY--------TDPVVGLFGSIDYVSPEALLQ--DRITSKSDMWSLGV  232 (521)
Q Consensus       163 i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~--------~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~  232 (521)
                      |+||||||+|||+   +.++.+||+|||.+.....        .......+||+.|+|||++.+  ..|+.++|||||||
T Consensus       149 ivHrDlkp~NIll---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~  225 (389)
T 3gni_B          149 YVHRSVKASHILI---SVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGI  225 (389)
T ss_dssp             EECCCCSGGGEEE---CTTCCEEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHH
T ss_pred             eecCCCCHHHEEE---cCCCCEEEcccccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHH
Confidence            9999999999999   7788999999998754211        111223479999999999987  57899999999999


Q ss_pred             HHHHHHhCCCCCCCCCcHHHHHHHHcCCCCC------------------------------------------chhhhhc
Q 009980          233 ILYILLSGYPPFIAQSNRQKQQMIMAGEFSF------------------------------------------YEQTWKN  270 (521)
Q Consensus       233 il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~------------------------------------------~~~~~~~  270 (521)
                      ++|+|++|.+||.+.+.......+..+..+.                                          ..+.+..
T Consensus       226 il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (389)
T 3gni_B          226 TACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRT  305 (389)
T ss_dssp             HHHHHHHSSCTTTTCCSTTHHHHC--------------------------------------------------------
T ss_pred             HHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccccccccccccccccccccccccccccccccCccccccCCCCCCccccc
Confidence            9999999999998877665554433322110                                          1123456


Q ss_pred             cCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCC
Q 009980          271 ISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDS  306 (521)
Q Consensus       271 ~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~  306 (521)
                      +|+.+++||.+||+.||.+|||+.++|+||||....
T Consensus       306 ~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~~  341 (389)
T 3gni_B          306 FSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIK  341 (389)
T ss_dssp             CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC-
T ss_pred             cCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHHh
Confidence            899999999999999999999999999999998644

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=100.00  E-value=2.4e-49  Score=388.27  Aligned_cols=260  Identities=27%  Similarity=0.452  Sum_probs=205.2

Q ss_pred             ccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEI   88 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   88 (521)
                      .++|++.+.||+|+||.||+|+++.  +++.||||++......                           .....+.+|+
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~--~~~~vaiK~~~~~~~~---------------------------~~~~~~~~E~   54 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKT--TGVYVALKEVKLDSEE---------------------------GTPSTAIREI   54 (317)
T ss_dssp             ---------------CEEEEEECSS--SCCEEEEEEEECCSTT---------------------------CSCHHHHHHH
T ss_pred             ccceeEeeEECCCCCEEEEEEEECC--CCcEEEEEEeeccccc---------------------------ccHHHHHHHH
Confidence            5789999999999999999999987  7899999999753321                           1124577899


Q ss_pred             HHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCC
Q 009980           89 LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ------ERYMEVGAAAVIRQIAEGLAALHQAN  162 (521)
Q Consensus        89 ~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~------~~~~~~~~~~i~~qil~al~~lH~~~  162 (521)
                      .+++++     +||||+++++++.+++.+|+||||+.| +|.+++...      ..+++..+..++.||+.||.|||++|
T Consensus        55 ~~l~~l-----~hp~iv~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~  128 (317)
T 2pmi_A           55 SLMKEL-----KHENIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK  128 (317)
T ss_dssp             HHHTTC-----CBTTBCCEEEEECCTTEEEEEEECCCC-BHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHhc-----CCCCcceEEEEEEECCeEEEEEEecCC-CHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999988     999999999999999999999999985 999988754      35899999999999999999999999


Q ss_pred             CeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCC-CCcccccCCccccccccccc-CCCCchhhhHHHHHHHHHHHhC
Q 009980          163 IVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYT-DPVVGLFGSIDYVSPEALLQ-DRITSKSDMWSLGVILYILLSG  240 (521)
Q Consensus       163 i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~ll~g  240 (521)
                      |+||||||+||++   +.++.+||+|||+++..... .......||+.|+|||++.+ ..++.++|||||||++|+|++|
T Consensus       129 ivH~Dlkp~NIl~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g  205 (317)
T 2pmi_A          129 ILHRDLKPQNLLI---NKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITG  205 (317)
T ss_dssp             EECCCCCGGGEEE---CTTCCEEECCCSSCEETTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHS
T ss_pred             eeeCCCChHHeEE---cCCCCEEECcCccceecCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhC
Confidence            9999999999999   77889999999999865432 23345579999999999976 4689999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHHcCCCCCch------------------------------hhhhccCHHHHHHHHHhccCCCCCC
Q 009980          241 YPPFIAQSNRQKQQMIMAGEFSFYE------------------------------QTWKNISSSAKQLISSLLTVDPNRR  290 (521)
Q Consensus       241 ~~pf~~~~~~~~~~~i~~~~~~~~~------------------------------~~~~~~s~~~~~li~~~l~~dp~~R  290 (521)
                      .+||.+.+..+....+.......+.                              .....+++++++||.+||+.||.+|
T Consensus       206 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R  285 (317)
T 2pmi_A          206 KPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMR  285 (317)
T ss_dssp             SCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGS
T ss_pred             CCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccC
Confidence            9999998887777666542111100                              1112578999999999999999999


Q ss_pred             CCHHHHHcCCcccCCC
Q 009980          291 PSAQELLNHPWVIGDS  306 (521)
Q Consensus       291 ~t~~~~l~h~~~~~~~  306 (521)
                      ||+.++|+||||....
T Consensus       286 pt~~e~l~hp~f~~~~  301 (317)
T 2pmi_A          286 LSAKQALHHPWFAEYY  301 (317)
T ss_dssp             CCHHHHTTSGGGGGGC
T ss_pred             CCHHHHhCChhhhccc
Confidence            9999999999998644

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=6.9e-50  Score=397.13  Aligned_cols=273  Identities=31%  Similarity=0.518  Sum_probs=229.5

Q ss_pred             cccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHH
Q 009980            4 ETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDAL   83 (521)
Q Consensus         4 ~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (521)
                      +...+.++|++.+.||+|+||.||+|+++.  +++.||+|++.+......                       .......
T Consensus        20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~--~~~~vaiK~~~~~~~~~~-----------------------~~~~~~~   74 (345)
T 3hko_A           20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQ--TRAIRAIKIMNKNKIRQI-----------------------NPKDVER   74 (345)
T ss_dssp             CHHHHHHHEEEEEEEEECSSCEEEEEEETT--TCCEEEEEEEEHHHHHC--------------------------CHHHH
T ss_pred             hhhhhhhheeecceeeecCCeEEEEEEECC--CCceEEEeehhhhhhccc-----------------------CHHHHHH
Confidence            345677899999999999999999999987  788999999975422110                       0123456


Q ss_pred             HHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh----------------------------
Q 009980           84 LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA----------------------------  135 (521)
Q Consensus        84 ~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~----------------------------  135 (521)
                      +.+|+.+++++     +||||+++++++.+.+..|+|||||+||+|.+++..                            
T Consensus        75 ~~~E~~~l~~l-----~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (345)
T 3hko_A           75 IKTEVRLMKKL-----HHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEA  149 (345)
T ss_dssp             HHHHHHHHHHC-----CCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHH
T ss_pred             HHHHHHHHHhC-----CCCCcceeehhhccCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccc
Confidence            88999999998     999999999999999999999999999999998842                            


Q ss_pred             ------------cCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC----
Q 009980          136 ------------QERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD----  199 (521)
Q Consensus       136 ------------~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~----  199 (521)
                                  ...+++..++.++.||+.||.|||++||+||||||+||++.. +....+||+|||++.......    
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~-~~~~~~kl~Dfg~a~~~~~~~~~~~  228 (345)
T 3hko_A          150 INGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFST-NKSFEIKLVDFGLSKEFYKLNNGEY  228 (345)
T ss_dssp             HHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESC-SSSCCEEECCCTTCEEGGGTTCC--
T ss_pred             cccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEec-CCCceEEEeeccccccccccCcccc
Confidence                        112467889999999999999999999999999999999932 122389999999997542211    


Q ss_pred             -CcccccCCccccccccccc--CCCCchhhhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHH
Q 009980          200 -PVVGLFGSIDYVSPEALLQ--DRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAK  276 (521)
Q Consensus       200 -~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~  276 (521)
                       ......||+.|+|||++.+  ..++.++|||||||++|+|++|..||.+.+..+....+......++.+.+..+++.++
T Consensus       229 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (345)
T 3hko_A          229 YGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLAR  308 (345)
T ss_dssp             ------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHH
T ss_pred             ccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccCCHHHH
Confidence             2345579999999999975  6789999999999999999999999999999999999998888888777888999999


Q ss_pred             HHHHHhccCCCCCCCCHHHHHcCCcccCCCC
Q 009980          277 QLISSLLTVDPNRRPSAQELLNHPWVIGDSA  307 (521)
Q Consensus       277 ~li~~~l~~dp~~R~t~~~~l~h~~~~~~~~  307 (521)
                      +||.+||..||.+|||+.++|+||||++...
T Consensus       309 ~li~~~l~~~p~~Rps~~~~l~hp~~~~~~~  339 (345)
T 3hko_A          309 DLLSNLLNRNVDERFDAMRALQHPWISQFSD  339 (345)
T ss_dssp             HHHHHHSCSCTTTSCCHHHHHHSHHHHTTSS
T ss_pred             HHHHHHcCCChhHCCCHHHHhcChhhccChH
Confidence            9999999999999999999999999986543

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=100.00  E-value=3.6e-49  Score=383.77  Aligned_cols=282  Identities=27%  Similarity=0.459  Sum_probs=218.8

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      ...++|++.+.||+|+||.||+|+++.  +++.||||++.+.......+++.......  .................+.+
T Consensus        10 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~   85 (298)
T 2zv2_A           10 VQLNQYTLKDEIGKGSYGVVKLAYNEN--DNTYYAMKVLSKKKLIRQAGFPRRPPPRG--TRPAPGGCIQPRGPIEQVYQ   85 (298)
T ss_dssp             CEETTEEEEEEEEC--CCEEEEEEETT--TTEEEEEEEEECC---------------------------------CHHHH
T ss_pred             eeecceEEEeEEeecCCEEEEEEEECC--CCcEEEEEEeehhhhhhhccccccccccc--ccccccccccccchHHHHHH
Confidence            346899999999999999999999988  78899999997654322110000000000  00000000000111245789


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEe--CCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYED--QNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIV  164 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~--~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~  164 (521)
                      |+.+++++     +||||+++++++.+  .+.+|+||||++|++|.+++ ....+++..+..++.||+.||.|||++||+
T Consensus        86 E~~~l~~l-----~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~iv  159 (298)
T 2zv2_A           86 EIAILKKL-----DHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP-TLKPLSEDQARFYFQDLIKGIEYLHYQKII  159 (298)
T ss_dssp             HHHHHHTC-----CCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSS-CSSCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHhC-----CCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence            99999998     99999999999987  56899999999999998754 346799999999999999999999999999


Q ss_pred             eccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC-CcccccCCcccccccccccCC---CCchhhhHHHHHHHHHHHhC
Q 009980          165 HRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALLQDR---ITSKSDMWSLGVILYILLSG  240 (521)
Q Consensus       165 H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~---~~~~~DiwslG~il~~ll~g  240 (521)
                      ||||||+||++   +.++.+||+|||+++...... ......||+.|+|||++.+..   ++.++|||||||++|+|++|
T Consensus       160 H~Dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g  236 (298)
T 2zv2_A          160 HRDIKPSNLLV---GEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFG  236 (298)
T ss_dssp             CCCCCGGGEEE---CTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHS
T ss_pred             ccCCCHHHEEE---CCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHC
Confidence            99999999999   778899999999998654332 234457999999999998655   47899999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCccc
Q 009980          241 YPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVI  303 (521)
Q Consensus       241 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~  303 (521)
                      ..||.+.........+......++.  ...+++.+++||.+||..||.+|||+.++++||||+
T Consensus       237 ~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~~~  297 (298)
T 2zv2_A          237 QCPFMDERIMCLHSKIKSQALEFPD--QPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVT  297 (298)
T ss_dssp             SCSSCCSSHHHHHHHHHHCCCCCCS--SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHHHH
T ss_pred             CCCCCCccHHHHHHHHhcccCCCCC--ccccCHHHHHHHHHHhhcChhhCCCHHHHhcCcccc
Confidence            9999988877777777776655543  356899999999999999999999999999999985

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=100.00  E-value=2.2e-49  Score=381.41  Aligned_cols=263  Identities=32%  Similarity=0.555  Sum_probs=228.2

Q ss_pred             ccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHH
Q 009980            5 TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALL   84 (521)
Q Consensus         5 ~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (521)
                      ...-.++|++.+.||+|+||.||+|.++.  ++..||||++.+....                         .......+
T Consensus         4 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~--~~~~vavK~~~~~~~~-------------------------~~~~~~~~   56 (279)
T 3fdn_A            4 RQWALEDFEIGRPLGKGKFGNVYLAREKQ--SKFILALKVLFKAQLE-------------------------KAGVEHQL   56 (279)
T ss_dssp             CCCCGGGEEEEEEEEECSSEEEEEEEETT--TCCEEEEEEEEHHHHH-------------------------HHTCHHHH
T ss_pred             ceeecccEEEeeEEecCCCeEEEEEEEcc--CCcEEEEEEEeccccc-------------------------hhhHHHHH
Confidence            34567899999999999999999999987  7889999998653211                         01123557


Q ss_pred             HHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 009980           85 TNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIV  164 (521)
Q Consensus        85 ~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~  164 (521)
                      .+|+.+++++     +||||+++++++.+.+..|+||||++|++|.+.+.....+++..+..++.||+.||.|||++||+
T Consensus        57 ~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~  131 (279)
T 3fdn_A           57 RREVEIQSHL-----RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVI  131 (279)
T ss_dssp             HHHHHHHTTC-----CCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTCE
T ss_pred             HHHHHHHHcC-----CCCCCcchhheEecCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEe
Confidence            8899999888     89999999999999999999999999999999999888999999999999999999999999999


Q ss_pred             eccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCC
Q 009980          165 HRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF  244 (521)
Q Consensus       165 H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf  244 (521)
                      ||||||+||++   +.++.++|+|||++...... ......||+.|+|||++.+..++.++||||||+++|+|++|..||
T Consensus       132 H~dlkp~Nili---~~~~~~~l~Dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~  207 (279)
T 3fdn_A          132 HRDIKPENLLL---GSAGELKIADFGWSVHAPSS-RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF  207 (279)
T ss_dssp             ECCCCGGGEEE---CTTSCEEECSCCEESCC---------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTT
T ss_pred             cccCChHhEEE---cCCCCEEEEeccccccCCcc-cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCC
Confidence            99999999999   77889999999998654432 234457999999999999989999999999999999999999999


Q ss_pred             CCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCCC
Q 009980          245 IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSA  307 (521)
Q Consensus       245 ~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~~  307 (521)
                      ...+..+....+......++    ..+++.+++||.+||..||.+|||+.++++||||.....
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~~~~~~~~  266 (279)
T 3fdn_A          208 EANTYQETYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS  266 (279)
T ss_dssp             CCSSHHHHHHHHHHTCCCCC----TTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCHHHHHHCS
T ss_pred             CCCcHHHHHHHHHhCCCCCC----CcCCHHHHHHHHHHhccChhhCCCHHHHhhCccccCCcc
Confidence            99988888888887776655    457999999999999999999999999999999976443

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=100.00  E-value=3e-48  Score=381.01  Aligned_cols=257  Identities=26%  Similarity=0.459  Sum_probs=223.5

Q ss_pred             ceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHH
Q 009980           11 EYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILV   90 (521)
Q Consensus        11 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   90 (521)
                      .|+..+.||+|+||.||+|+++.  +++.||||++.....                            .....+.+|+.+
T Consensus        46 ~~~~~~~lg~G~~g~V~~a~~~~--~g~~vavK~~~~~~~----------------------------~~~~~~~~E~~~   95 (321)
T 2c30_A           46 LLDSYVKIGEGSTGIVCLAREKH--SGRQVAVKMMDLRKQ----------------------------QRRELLFNEVVI   95 (321)
T ss_dssp             HEEEEEEEEEETTEEEEEEEETT--TCCEEEEEEEETTTC----------------------------CSHHHHHHHHHH
T ss_pred             hhhccEEeccCCCeEEEEEEECC--CCcEEEEEEEeccch----------------------------hHHHHHHHHHHH
Confidence            58888999999999999999987  788999999864321                            123457899999


Q ss_pred             HHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCC
Q 009980           91 MRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKP  170 (521)
Q Consensus        91 l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp  170 (521)
                      ++++     +||||+++++++...+..|+||||+.|++|.+++.. ..+++..+..++.||+.||.|||++||+||||||
T Consensus        96 l~~l-----~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp  169 (321)
T 2c30_A           96 MRDY-----QHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ-VRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKS  169 (321)
T ss_dssp             HTTC-----CCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSG
T ss_pred             HHhC-----CCCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCH
Confidence            9988     999999999999999999999999999999998764 5799999999999999999999999999999999


Q ss_pred             CcEEEeeCCCCCCEEEeecCCCccCCCCC-CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCc
Q 009980          171 ENCLFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSN  249 (521)
Q Consensus       171 ~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~  249 (521)
                      +||++   +.++.+||+|||++....... ......||+.|+|||++.+..++.++||||||+++|+|++|..||.+.+.
T Consensus       170 ~NIll---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~  246 (321)
T 2c30_A          170 DSILL---TLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP  246 (321)
T ss_dssp             GGEEE---CTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH
T ss_pred             HHEEE---CCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence            99999   778899999999997654332 23456799999999999998999999999999999999999999998888


Q ss_pred             HHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCCC
Q 009980          250 RQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSA  307 (521)
Q Consensus       250 ~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~~  307 (521)
                      .+....+.....+.. .....+|+.++++|.+||..||.+|||+.++++||||.....
T Consensus       247 ~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~~~  303 (321)
T 2c30_A          247 VQAMKRLRDSPPPKL-KNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQTGL  303 (321)
T ss_dssp             HHHHHHHHHSSCCCC-TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGGGCCC
T ss_pred             HHHHHHHhcCCCCCc-CccccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhccCCC
Confidence            777777766543322 223568999999999999999999999999999999986543

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=5.4e-49  Score=393.31  Aligned_cols=262  Identities=28%  Similarity=0.412  Sum_probs=215.6

Q ss_pred             cccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHH
Q 009980            4 ETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDAL   83 (521)
Q Consensus         4 ~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (521)
                      ....+.++|++.+.||+|+||.||+|+++.  +++.||||++.+....                          ......
T Consensus        19 ~~~~~~~~y~~~~~lG~G~~g~V~~a~~~~--~~~~vaiK~~~~~~~~--------------------------~~~~~~   70 (367)
T 1cm8_A           19 TAWEVRAVYRDLQPVGSGAYGAVCSAVDGR--TGAKVAIKKLYRPFQS--------------------------ELFAKR   70 (367)
T ss_dssp             SEECCBSSEEEEEEC------CEEEEEETT--TCCEEEEEECSSTTSS--------------------------HHHHHH
T ss_pred             ceeeecceEEEeEEeeecCCeEEEEEEECC--CCCEEEEEEeCccccC--------------------------HHHHHH
Confidence            344678899999999999999999999988  7889999998542110                          122355


Q ss_pred             HHHHHHHHHHHhhccCCCCCccceeEEEEeCC------eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 009980           84 LTNEILVMRKIVENVSPHPNVIDLYDVYEDQN------GVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAA  157 (521)
Q Consensus        84 ~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~------~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~  157 (521)
                      +.+|+.+++++     +||||+++++++....      .+|+||||+ |++|.+++.. ..+++..+..++.||+.||.|
T Consensus        71 ~~~E~~~l~~l-----~hpnIv~l~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~qi~~~L~~  143 (367)
T 1cm8_A           71 AYRELRLLKHM-----RHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKH-EKLGEDRIQFLVYQMLKGLRY  143 (367)
T ss_dssp             HHHHHHHHHHC-----CBTTBCCCSEEECSCSSTTTCCCCEEEEECC-SEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhC-----CCcCCCCceeeEecCCccccCceEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHH
Confidence            78999999998     9999999999997763      469999999 8899988876 679999999999999999999


Q ss_pred             HHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCccccccccccc-CCCCchhhhHHHHHHHHH
Q 009980          158 LHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQ-DRITSKSDMWSLGVILYI  236 (521)
Q Consensus       158 lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~  236 (521)
                      ||++||+||||||+||++   +.++.+||+|||+|+....  .....+||+.|+|||++.+ ..++.++||||+||++|+
T Consensus       144 LH~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~e  218 (367)
T 1cm8_A          144 IHAAGIIHRDLKPGNLAV---NEDCELKILDFGLARQADS--EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAE  218 (367)
T ss_dssp             HHHTTEECCCCCGGGEEE---CTTCCEEECCCTTCEECCS--SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHH
T ss_pred             HHHCCccccCcCHHHEEE---cCCCCEEEEeeeccccccc--ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHH
Confidence            999999999999999999   7788999999999987543  2345679999999999887 679999999999999999


Q ss_pred             HHhCCCCCCCCCcHHHHHHHHcCCCCCc---------------------------hhhhhccCHHHHHHHHHhccCCCCC
Q 009980          237 LLSGYPPFIAQSNRQKQQMIMAGEFSFY---------------------------EQTWKNISSSAKQLISSLLTVDPNR  289 (521)
Q Consensus       237 ll~g~~pf~~~~~~~~~~~i~~~~~~~~---------------------------~~~~~~~s~~~~~li~~~l~~dp~~  289 (521)
                      |++|++||.+.+.......+......++                           ...+..+++.+.+||.+||..||.+
T Consensus       219 ll~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~  298 (367)
T 1cm8_A          219 MITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQ  298 (367)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTT
T ss_pred             HHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhH
Confidence            9999999998887776666554222211                           1223467999999999999999999


Q ss_pred             CCCHHHHHcCCcccCC
Q 009980          290 RPSAQELLNHPWVIGD  305 (521)
Q Consensus       290 R~t~~~~l~h~~~~~~  305 (521)
                      |||+.++|+||||...
T Consensus       299 R~t~~e~l~hp~f~~~  314 (367)
T 1cm8_A          299 RVTAGEALAHPYFESL  314 (367)
T ss_dssp             SCCHHHHHHSGGGTTT
T ss_pred             CCCHHHHhcChHHHhh
Confidence            9999999999999754

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=100.00  E-value=1.1e-48  Score=389.48  Aligned_cols=264  Identities=23%  Similarity=0.397  Sum_probs=219.5

Q ss_pred             cccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      ..++|++.+.||+|+||.||+|+++.  +++.||||++.......                          .....+.+|
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~--~~~~vaiK~~~~~~~~~--------------------------~~~~~~~~E   66 (351)
T 3mi9_A           15 EVSKYEKLAKIGQGTFGEVFKARHRK--TGQKVALKKVLMENEKE--------------------------GFPITALRE   66 (351)
T ss_dssp             BGGGEEEEEECSSCSTTSEEEEEETT--TCCEEEEEECCCSSCSS--------------------------SSCHHHHHH
T ss_pred             cccceeEEEEEecCCCcEEEEEEECC--CCCEEEEEEEecccccc--------------------------cchHHHHHH
Confidence            46899999999999999999999987  78899999986543211                          112346789


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEe--------CCeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHH
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYED--------QNGVHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAAL  158 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~--------~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~al~~l  158 (521)
                      +.+++++     +||||+++++++..        .+.+|+||||+.| +|.+.+.. ...+++..++.++.||+.||.||
T Consensus        67 ~~~l~~l-----~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~L  140 (351)
T 3mi9_A           67 IKILQLL-----KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYI  140 (351)
T ss_dssp             HHHHHHC-----CCTTBCCEEEEEEEC--------CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhc-----cCCCcccHhheeeccccccccCCceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999998     99999999999987        4568999999986 77776664 36799999999999999999999


Q ss_pred             HHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCC-----CCCcccccCCccccccccccc-CCCCchhhhHHHHH
Q 009980          159 HQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGY-----TDPVVGLFGSIDYVSPEALLQ-DRITSKSDMWSLGV  232 (521)
Q Consensus       159 H~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~  232 (521)
                      |++||+||||||+|||+   +.++.+||+|||+|+....     ........||+.|+|||++.+ ..++.++|||||||
T Consensus       141 H~~~ivH~Dlkp~NIl~---~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~  217 (351)
T 3mi9_A          141 HRNKILHRDMKAANVLI---TRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGC  217 (351)
T ss_dssp             HHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHH
T ss_pred             HHCCeeCCCCCHHHEEE---cCCCCEEEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHH
Confidence            99999999999999999   7788999999999976432     122344578999999999876 45899999999999


Q ss_pred             HHHHHHhCCCCCCCCCcHHHHHHHHcCCCCCchhhhhc----------------------------cCHHHHHHHHHhcc
Q 009980          233 ILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKN----------------------------ISSSAKQLISSLLT  284 (521)
Q Consensus       233 il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~----------------------------~s~~~~~li~~~l~  284 (521)
                      ++|+|++|.+||.+.+.......+......++...|+.                            .++.+++||.+||.
T Consensus       218 il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  297 (351)
T 3mi9_A          218 IMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLV  297 (351)
T ss_dssp             HHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSC
T ss_pred             HHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhc
Confidence            99999999999999888877777665433333333322                            27889999999999


Q ss_pred             CCCCCCCCHHHHHcCCcccCCCCc
Q 009980          285 VDPNRRPSAQELLNHPWVIGDSAK  308 (521)
Q Consensus       285 ~dp~~R~t~~~~l~h~~~~~~~~~  308 (521)
                      .||.+|||+.++|+||||.....+
T Consensus       298 ~dP~~R~t~~e~l~hp~f~~~~~~  321 (351)
T 3mi9_A          298 LDPAQRIDSDDALNHDFFWSDPMP  321 (351)
T ss_dssp             SSGGGSCCHHHHHTSGGGGSSSCC
T ss_pred             CChhhCCCHHHHhCCCCcCCCCCc
Confidence            999999999999999999875543

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=100.00  E-value=5.6e-49  Score=405.55  Aligned_cols=264  Identities=27%  Similarity=0.471  Sum_probs=201.5

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      ..+.++|++++.||+|+||+||+|+++.  +++.||||++.+....                          ......+.
T Consensus        49 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~--~~~~vaiK~i~~~~~~--------------------------~~~~~~~~  100 (458)
T 3rp9_A           49 WQIPDRYEIRHLIGTGSYGHVCEAYDKL--EKRVVAIKKILRVFED--------------------------LIDCKRIL  100 (458)
T ss_dssp             CCSCTTEEECCC-------CEEEEEECC----CEEEEEEECSTTSS--------------------------HHHHHHHH
T ss_pred             CccCCCeEEeeEeeecCCeEEEEEEECC--CCcEEEEEEechhhcC--------------------------HHHHHHHH
Confidence            3567899999999999999999999988  7889999998642211                          12345688


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEe-----CCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYED-----QNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ  160 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~-----~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~  160 (521)
                      +|+.+++++     +||||+++++++..     ...+|+||||+ +++|.+++.....+++..++.++.||+.||.|||+
T Consensus       101 ~E~~~l~~l-----~h~niv~l~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~  174 (458)
T 3rp9_A          101 REIAILNRL-----NHDHVVKVLDIVIPKDVEKFDELYVVLEIA-DSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHS  174 (458)
T ss_dssp             HHHHHHHHC-----CCTTBCCEEEECCCSCTTTCCCEEEEECCC-SEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhC-----CCCCCCceEEEEecCCcccCceEEEEEecc-ccchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            999999999     99999999999943     35799999998 56999999988889999999999999999999999


Q ss_pred             CCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC----------------------------CcccccCCccccc
Q 009980          161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD----------------------------PVVGLFGSIDYVS  212 (521)
Q Consensus       161 ~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~----------------------------~~~~~~gt~~y~a  212 (521)
                      +||+||||||+|||+   +.++.+||+|||+|+......                            .....+||+.|+|
T Consensus       175 ~~iiHrDlKp~NILl---~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~a  251 (458)
T 3rp9_A          175 AGILHRDLKPANCLV---NQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRA  251 (458)
T ss_dssp             TTCBCCCCCGGGEEE---CTTCCEEECCCTTCBCTTSCTTCCCCCC---------------------------CCCTTCC
T ss_pred             CCcCCCCCChhhEEE---CCCCCEeecccccchhccCccccccccccCccccccccccccccccccccccCCcccccccC
Confidence            999999999999999   778899999999998653221                            2344578999999


Q ss_pred             cccc-ccCCCCchhhhHHHHHHHHHHHh-----------CCCCCCCCCc--------------------HHHHHHHHcC-
Q 009980          213 PEAL-LQDRITSKSDMWSLGVILYILLS-----------GYPPFIAQSN--------------------RQKQQMIMAG-  259 (521)
Q Consensus       213 PE~~-~~~~~~~~~DiwslG~il~~ll~-----------g~~pf~~~~~--------------------~~~~~~i~~~-  259 (521)
                      ||++ .+..|+.++|||||||++|+|++           |.+||.+.+.                    ......+... 
T Consensus       252 PE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~  331 (458)
T 3rp9_A          252 PELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNIL  331 (458)
T ss_dssp             HHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHH
T ss_pred             hHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHc
Confidence            9986 45679999999999999999999           7788866542                    1111111110 


Q ss_pred             --------------------------CCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCC
Q 009980          260 --------------------------EFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDS  306 (521)
Q Consensus       260 --------------------------~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~  306 (521)
                                                ........++.+++++.+||.+||..||.+|||++++|+||||.+..
T Consensus       332 g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~~  404 (458)
T 3rp9_A          332 GTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVR  404 (458)
T ss_dssp             CCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred             CCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhcC
Confidence                                      00111223456799999999999999999999999999999998654

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=100.00  E-value=1e-48  Score=382.74  Aligned_cols=258  Identities=23%  Similarity=0.270  Sum_probs=209.6

Q ss_pred             ccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHH
Q 009980            5 TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALL   84 (521)
Q Consensus         5 ~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (521)
                      +..+.++|++.+.||+|+||+||+|+++.  +++.||||++......                          .......
T Consensus        52 ~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~--~~~~vavK~~~~~~~~--------------------------~~~~~~~  103 (311)
T 3p1a_A           52 ESFFQQSFQRLSRLGHGSYGEVFKVRSKE--DGRLYAVKRSMSPFRG--------------------------PKDRARK  103 (311)
T ss_dssp             SCHHHHHEEEEEEEEEETTEEEEEEEETT--TSCEEEEEEESSSCCS--------------------------HHHHHHH
T ss_pred             cchhhhheeeeheeccCCCeEEEEEEECC--CCeEEEEEEecccccC--------------------------hHHHHHH
Confidence            34455889999999999999999999987  7889999997542211                          1122334


Q ss_pred             HHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 009980           85 TNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQANI  163 (521)
Q Consensus        85 ~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~~~i  163 (521)
                      ..|+..+.++    ..||||+++++++.+.+.+|+||||+ +++|.+++... ..+++..+..++.||+.||.|||++||
T Consensus       104 ~~e~~~~~~~----~~h~~iv~l~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i  178 (311)
T 3p1a_A          104 LAEVGSHEKV----GQHPCCVRLEQAWEEGGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGL  178 (311)
T ss_dssp             HHHHHHHHHH----CCCTTBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHHh----cCCCcEEEEEEEEEeCCEEEEEEecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            4555555544    48999999999999999999999999 66898887764 469999999999999999999999999


Q ss_pred             eeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCC
Q 009980          164 VHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPP  243 (521)
Q Consensus       164 ~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~p  243 (521)
                      +||||||+|||+   +.++.+||+|||++.............||+.|+|||++.+ .++.++||||+||++|+|++|..|
T Consensus       179 vH~Dikp~NIll---~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~  254 (311)
T 3p1a_A          179 VHLDVKPANIFL---GPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMEL  254 (311)
T ss_dssp             ECCCCSGGGEEE---CGGGCEEECCCTTCEECC------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCC
T ss_pred             ecCCCCHHHEEE---CCCCCEEEccceeeeecccCCCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCC
Confidence            999999999999   7778999999999987655545555679999999999875 799999999999999999999777


Q ss_pred             CCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccC
Q 009980          244 FIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIG  304 (521)
Q Consensus       244 f~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~  304 (521)
                      +.+..   ....+..+.  .+...+..+++++.+||.+||..||.+|||+.++|+||||++
T Consensus       255 ~~~~~---~~~~~~~~~--~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~~~~  310 (311)
T 3p1a_A          255 PHGGE---GWQQLRQGY--LPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLALPVLRQ  310 (311)
T ss_dssp             CSSHH---HHHHHTTTC--CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGSC
T ss_pred             CCCcc---HHHHHhccC--CCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhCccccC
Confidence            65432   233333333  234455779999999999999999999999999999999974

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=100.00  E-value=6.1e-49  Score=377.71  Aligned_cols=265  Identities=32%  Similarity=0.502  Sum_probs=221.9

Q ss_pred             ccccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHH
Q 009980            3 QETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDA   82 (521)
Q Consensus         3 ~~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (521)
                      +.+....++|++.+.||+|+||.||+|.++.  +++.||||++.......                         .....
T Consensus         4 ~~g~~~~~~y~i~~~lg~G~~g~V~~~~~~~--~~~~vaiK~~~~~~~~~-------------------------~~~~~   56 (276)
T 2h6d_A            4 HDGRVKIGHYVLGDTLGVGTFGKVKIGEHQL--TGHKVAVKILNRQKIRS-------------------------LDVVG   56 (276)
T ss_dssp             ---CCEETTEEEEEEEEECSSEEEEEEEETT--TCCEEEEEEEEHHHHHH-------------------------TTCHH
T ss_pred             ccCcceeccEEEEeeecCCCCeEEEEEEECC--CCceEEEEEeccccccc-------------------------hhHHH
Confidence            4566678999999999999999999999987  78899999986532110                         11234


Q ss_pred             HHHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 009980           83 LLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQAN  162 (521)
Q Consensus        83 ~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~  162 (521)
                      .+.+|+.+++++     +||||+++++++...+..|+||||+.|++|.+++...+.+++..+..++.||+.||.|||++|
T Consensus        57 ~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  131 (276)
T 2h6d_A           57 KIKREIQNLKLF-----RHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHM  131 (276)
T ss_dssp             HHHHHHHHHHTC-----CCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHhcC-----CCCCEeEEEEEEecCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            578899999988     999999999999999999999999999999999998889999999999999999999999999


Q ss_pred             CeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCC-CchhhhHHHHHHHHHHHhCC
Q 009980          163 IVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRI-TSKSDMWSLGVILYILLSGY  241 (521)
Q Consensus       163 i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~~ll~g~  241 (521)
                      |+||||||+||++   +.++.+||+|||++.............||+.|+|||.+.+..+ +.++||||||+++|+|++|.
T Consensus       132 i~H~dl~p~Nil~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~  208 (276)
T 2h6d_A          132 VVHRDLKPENVLL---DAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGT  208 (276)
T ss_dssp             SSCCCCCGGGEEE---CTTSCEEECCCCGGGCCCC-------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSS
T ss_pred             CccCCCChhhEEE---CCCCCEEEeecccccccCCCcceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCC
Confidence            9999999999999   7788999999999987655444455679999999999987765 68999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCC
Q 009980          242 PPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDS  306 (521)
Q Consensus       242 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~  306 (521)
                      .||...........+..+....+    ..+++.+.++|.+||..||.+|||+.++++||||+...
T Consensus       209 ~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h~~~~~~~  269 (276)
T 2h6d_A          209 LPFDDEHVPTLFKKIRGGVFYIP----EYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQDL  269 (276)
T ss_dssp             CSSCCSSHHHHHHHHHHCCCCCC----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHTTC
T ss_pred             CCCCCCcHHHHHHHhhcCcccCc----hhcCHHHHHHHHHHccCChhhCCCHHHHHhChhhccCc
Confidence            99998888888888877765544    45789999999999999999999999999999997653

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=100.00  E-value=8.3e-49  Score=407.09  Aligned_cols=260  Identities=27%  Similarity=0.405  Sum_probs=225.7

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      .-.++|++.+.||+|+||.||+|+++.  +++.||||++.+.....                         ......+.+
T Consensus       182 ~~~~~f~~~~~LG~G~fG~Vy~a~~~~--tg~~vAiK~l~k~~~~~-------------------------~~~~~~~~~  234 (543)
T 3c4z_A          182 MGEDWFLDFRVLGRGGFGEVFACQMKA--TGKLYACKKLNKKRLKK-------------------------RKGYQGAMV  234 (543)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEETT--TCCEEEEEEEEHHHHHH-------------------------TTCHHHHHH
T ss_pred             CChhheEEEEEEeeCCCeEEEEEEECC--CCcEEEEEEEEhHHhhh-------------------------hHHHHHHHH
Confidence            445899999999999999999999987  78999999997532211                         012345788


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ----ERYMEVGAAAVIRQIAEGLAALHQAN  162 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~----~~~~~~~~~~i~~qil~al~~lH~~~  162 (521)
                      |+.+++++     +||||+++++++.+.+.+|+||||++||+|.+++...    ..+++..++.++.||+.||.|||++|
T Consensus       235 E~~iL~~l-----~hp~Iv~l~~~~~~~~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g  309 (543)
T 3c4z_A          235 EKKILAKV-----HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN  309 (543)
T ss_dssp             HHHHHHHC-----CCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHhc-----CCCCEeeEEEEEeeCCEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcC
Confidence            99999998     9999999999999999999999999999999998764    36999999999999999999999999


Q ss_pred             CeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC-cccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCC
Q 009980          163 IVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP-VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGY  241 (521)
Q Consensus       163 i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~  241 (521)
                      |+||||||+|||+   +.++.+||+|||+++....... ....+||+.|+|||++.+..|+.++|||||||++|+|++|.
T Consensus       310 IvHrDLKP~NILl---~~~g~vkL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~  386 (543)
T 3c4z_A          310 IIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR  386 (543)
T ss_dssp             EECCCCCGGGEEE---CTTSCEEECCCTTCEECCTTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSS
T ss_pred             CcccCCChHHEEE---eCCCCEEEeecceeeeccCCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCC
Confidence            9999999999999   7888999999999987554333 23458999999999999999999999999999999999999


Q ss_pred             CCCCCCC----cHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCC-----HHHHHcCCcccCC
Q 009980          242 PPFIAQS----NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPS-----AQELLNHPWVIGD  305 (521)
Q Consensus       242 ~pf~~~~----~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t-----~~~~l~h~~~~~~  305 (521)
                      +||.+.+    ..++...+......++    ..+|+.+++||.+||..||.+||+     ++++++||||.+.
T Consensus       387 ~PF~~~~~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~i  455 (543)
T 3c4z_A          387 GPFRARGEKVENKELKQRVLEQAVTYP----DKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDI  455 (543)
T ss_dssp             CSSCCTTCCCCHHHHHHHHHHCCCCCC----TTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTTC
T ss_pred             CCCCCCccchhHHHHHHHHhhcccCCC----cccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCccccCC
Confidence            9998753    3556677777666554    568999999999999999999996     5899999999864

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=100.00  E-value=5.6e-49  Score=421.54  Aligned_cols=261  Identities=24%  Similarity=0.381  Sum_probs=229.9

Q ss_pred             cccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      -.++|++.+.||+|+||.||+|+++.  +++.||||++++.....                         ......+..|
T Consensus       339 ~~~~f~~~~~LG~G~fG~V~~~~~~~--~~~~vAvK~l~~~~~~~-------------------------~~~~~~~~~E  391 (674)
T 3pfq_A          339 KLTDFNFLMVLGKGSFGKVMLSERKG--TDELYAVKILKKDVVIQ-------------------------DDDVECTMVE  391 (674)
T ss_dssp             -CTTEEEEEESSBTTTBCEEEEEESS--SCCEEEEEEEEHHHHHH-------------------------TTTTHHHHHH
T ss_pred             cccceEEEEEEccCCCEEEEEEEECC--CCcEEEEEEEecccccc-------------------------HHHHHHHHHH
Confidence            35689999999999999999999988  88899999997532111                         0112345667


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecc
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRD  167 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~d  167 (521)
                      ..++..+    .+||||+++++++++.+.+||||||+.||+|.+++...+.+++..++.++.||+.||.|||++||+|||
T Consensus       392 ~~~l~~~----~~~~~i~~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrD  467 (674)
T 3pfq_A          392 KRVLALP----GKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRD  467 (674)
T ss_dssp             HHHHTCT----TCCTTBCCEEEECBCSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEECCC
T ss_pred             HHHHHhc----cCCCeEEEEEEEEEeCCEEEEEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecc
Confidence            7766654    489999999999999999999999999999999999989999999999999999999999999999999


Q ss_pred             CCCCcEEEeeCCCCCCEEEeecCCCccCC-CCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCC
Q 009980          168 LKPENCLFLNDREDSPLKIMDFGLSSVEG-YTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIA  246 (521)
Q Consensus       168 lkp~Nil~~~~~~~~~~kl~Dfg~a~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~  246 (521)
                      |||+|||+   +.++.+||+|||+|+... ........+||+.|+|||++.+..|+.++|||||||++|+|++|.+||.+
T Consensus       468 LKp~NILl---~~~g~ikL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~  544 (674)
T 3pfq_A          468 LKLDNVML---DSEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG  544 (674)
T ss_dssp             CCSTTEEE---CSSSCEEECCCTTCEECCCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             CChhhEEE---cCCCcEEEeecceeeccccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCC
Confidence            99999999   788899999999998532 23344567899999999999999999999999999999999999999999


Q ss_pred             CCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCH-----HHHHcCCcccCCC
Q 009980          247 QSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSA-----QELLNHPWVIGDS  306 (521)
Q Consensus       247 ~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~-----~~~l~h~~~~~~~  306 (521)
                      .+..++...|......++    ..+|+++++||.+||..||.+||++     +++++||||....
T Consensus       545 ~~~~~~~~~i~~~~~~~p----~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~i~  605 (674)
T 3pfq_A          545 EDEDELFQSIMEHNVAYP----KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYID  605 (674)
T ss_dssp             SSHHHHHHHHHSSCCCCC----TTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSGGGSSCC
T ss_pred             CCHHHHHHHHHhCCCCCC----ccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCccccCCC
Confidence            999999999999887776    4689999999999999999999997     9999999998643

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=100.00  E-value=1.2e-49  Score=389.56  Aligned_cols=266  Identities=26%  Similarity=0.395  Sum_probs=224.8

Q ss_pred             ccccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHH
Q 009980            3 QETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDA   82 (521)
Q Consensus         3 ~~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (521)
                      .....+.++|++.+.||+|+||.||+|+++.  +++.||||++.......                         .....
T Consensus         5 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~--~~~~vavK~~~~~~~~~-------------------------~~~~~   57 (311)
T 3ork_A            5 TTPSHLSDRYELGEILGFGGMSEVHLARDLR--DHRDVAVKVLRADLARD-------------------------PSFYL   57 (311)
T ss_dssp             CCCSEETTTEEEEEEEEECSSEEEEEEEETT--TTEEEEEEEECTTTTTS-------------------------HHHHH
T ss_pred             CCcceecCcEEEEEEEccCCCEEEEEEEECC--CCceEEEEEeCccccCC-------------------------HHHHH
Confidence            3567789999999999999999999999987  78899999996532211                         11234


Q ss_pred             HHHHHHHHHHHHhhccCCCCCccceeEEEEeCC----eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 009980           83 LLTNEILVMRKIVENVSPHPNVIDLYDVYEDQN----GVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAAL  158 (521)
Q Consensus        83 ~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~----~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~l  158 (521)
                      .+.+|+.+++++     +||||+++++++....    ..|+||||++|++|.+++...+.+++..+..++.||+.||.||
T Consensus        58 ~~~~E~~~l~~l-----~hp~iv~~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~l  132 (311)
T 3ork_A           58 RFRREAQNAAAL-----NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFS  132 (311)
T ss_dssp             HHHHHHTTCCCC-----CCTTBCCEEEEEEEEETTEEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcC-----CCCCcceEEEeeeccCCCCcccEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence            577888888877     9999999999987654    3599999999999999999888999999999999999999999


Q ss_pred             HHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC----CcccccCCcccccccccccCCCCchhhhHHHHHHH
Q 009980          159 HQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD----PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVIL  234 (521)
Q Consensus       159 H~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il  234 (521)
                      |++||+||||||+||++   +.++.+||+|||++.......    .....+||+.|+|||++.+..++.++|||||||++
T Consensus       133 H~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l  209 (311)
T 3ork_A          133 HQNGIIHRDVKPANIMI---SATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVL  209 (311)
T ss_dssp             HHTTCCCCCCCGGGEEE---ETTSCEEECCCSCC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHH
T ss_pred             HHCCCCcCCCCHHHEEE---cCCCCEEEeeccCcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHH
Confidence            99999999999999999   667889999999997653322    12335699999999999999999999999999999


Q ss_pred             HHHHhCCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCccc
Q 009980          235 YILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVI  303 (521)
Q Consensus       235 ~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~  303 (521)
                      |+|++|+.||.+.+..+....+.......+...+..+|+++.++|.+||..||.+||++.+++.|+|+.
T Consensus       210 ~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~  278 (311)
T 3ork_A          210 YEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVR  278 (311)
T ss_dssp             HHHHHSSCSCCCSSHHHHHHHHHHCCCCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             HHHHhCCCCCCCCChHHHHHHHhcCCCCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHH
Confidence            999999999999888888777777776666666778999999999999999999999999999999986

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=100.00  E-value=7.1e-49  Score=393.42  Aligned_cols=260  Identities=27%  Similarity=0.393  Sum_probs=208.9

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      ..+.++|++.+.||+|+||.||+|.++.  +++.||||++.+....                          ......+.
T Consensus        21 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~--~~~~vavK~~~~~~~~--------------------------~~~~~~~~   72 (371)
T 2xrw_A           21 FTVLKRYQNLKPIGSGAQGIVCAAYDAI--LERNVAIKKLSRPFQN--------------------------QTHAKRAY   72 (371)
T ss_dssp             EEEETTEEEEEEEEECSSEEEEEEEETT--TTEEEEEEEEECTTSS--------------------------HHHHHHHH
T ss_pred             cchhhheeEeeeeEecCCEEEEEEEECC--CCceEEEEEeccccCC--------------------------hHHHHHHH
Confidence            3567899999999999999999999987  7889999999753211                          12234577


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCC------eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQN------GVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALH  159 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~------~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH  159 (521)
                      +|+.+++.+     +||||+++++++...+      .+|+||||+.| +|.+.+.  ..+++..+..++.||+.||.|||
T Consensus        73 ~E~~~l~~l-----~hpniv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~--~~~~~~~~~~i~~qi~~al~~lH  144 (371)
T 2xrw_A           73 RELVLMKCV-----NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQ--MELDHERMSYLLYQMLCGIKHLH  144 (371)
T ss_dssp             HHHHHHHHC-----CCTTBCCEEEEECSCCSTTTCCEEEEEEECCSE-EHHHHHH--SCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhc-----CCCCccceEEeeccccccccccceEEEEEcCCC-CHHHHHh--hccCHHHHHHHHHHHHHHHHHHH
Confidence            899999998     9999999999997765      78999999975 7888775  46899999999999999999999


Q ss_pred             HCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh
Q 009980          160 QANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS  239 (521)
Q Consensus       160 ~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~  239 (521)
                      ++||+||||||+|||+   +.++.+||+|||+|+...........+||+.|+|||++.+..++.++|||||||++|+|++
T Consensus       145 ~~~ivH~Dlkp~NIl~---~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~  221 (371)
T 2xrw_A          145 SAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIK  221 (371)
T ss_dssp             HTTCCCSCCCGGGEEE---CTTSCEEECCCCC----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHH
T ss_pred             HCCeecccCCHHHEEE---cCCCCEEEEEeecccccccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHh
Confidence            9999999999999999   7788999999999987654444455689999999999999899999999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHHcCCCCCchhh--------------------------------------hhccCHHHHHHHHH
Q 009980          240 GYPPFIAQSNRQKQQMIMAGEFSFYEQT--------------------------------------WKNISSSAKQLISS  281 (521)
Q Consensus       240 g~~pf~~~~~~~~~~~i~~~~~~~~~~~--------------------------------------~~~~s~~~~~li~~  281 (521)
                      |.+||.+.+..+....+...........                                      ....++++++||.+
T Consensus       222 g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  301 (371)
T 2xrw_A          222 GGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSK  301 (371)
T ss_dssp             SSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHH
Confidence            9999999888777776665432221111                                      11236789999999


Q ss_pred             hccCCCCCCCCHHHHHcCCcccC
Q 009980          282 LLTVDPNRRPSAQELLNHPWVIG  304 (521)
Q Consensus       282 ~l~~dp~~R~t~~~~l~h~~~~~  304 (521)
                      ||..||.+|||++++|+||||..
T Consensus       302 mL~~dP~~R~t~~e~l~hp~~~~  324 (371)
T 2xrw_A          302 MLVIDASKRISVDEALQHPYINV  324 (371)
T ss_dssp             HSCSSGGGSCCHHHHHHSHHHHT
T ss_pred             HCcCChhhCCCHHHHhCCcchhh
Confidence            99999999999999999999974

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=100.00  E-value=1.3e-48  Score=399.13  Aligned_cols=264  Identities=27%  Similarity=0.471  Sum_probs=211.9

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      -.+.++|++.+.||+|+||.||+|+++.  +++.||||++.+....                          ......+.
T Consensus        22 ~~i~~~y~~~~~lG~G~~g~V~~a~~~~--~~~~vAiK~~~~~~~~--------------------------~~~~~~~~   73 (432)
T 3n9x_A           22 VHVPDNYIIKHLIGRGSYGYVYLAYDKN--TEKNVAIKKVNRMFED--------------------------LIDCKRIL   73 (432)
T ss_dssp             CCCCTTEEEEEEEEEETTEEEEEEEETT--TTEEEEEEEECSTTTS--------------------------HHHHHHHH
T ss_pred             ceecCCEEEEEEEeecCCEEEEEEEECC--CCcEEEEEEeCchhcC--------------------------hHHHHHHH
Confidence            4578999999999999999999999988  7889999999642211                          12345688


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeC-----CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQ-----NGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ  160 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~-----~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~  160 (521)
                      +|+.+++++     +||||+++++++...     ..+|+||||+. ++|.+++.....+++..++.++.||+.||.|||+
T Consensus        74 ~E~~~l~~l-----~h~nIv~l~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~  147 (432)
T 3n9x_A           74 REITILNRL-----KSDYIIRLYDLIIPDDLLKFDELYIVLEIAD-SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHE  147 (432)
T ss_dssp             HHHHHHHHC-----CCTTBCCEEEECCCSCTTTCCCEEEEEECCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHc-----CCCCcceEEEEEecCCCCcCCeEEEEEecCC-cCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            999999999     999999999999776     57999999996 5999999988889999999999999999999999


Q ss_pred             CCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC-----------------------CcccccCCccccccccc-
Q 009980          161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD-----------------------PVVGLFGSIDYVSPEAL-  216 (521)
Q Consensus       161 ~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-----------------------~~~~~~gt~~y~aPE~~-  216 (521)
                      +||+||||||+|||+   +.++.+||+|||+|+......                       .....+||+.|+|||++ 
T Consensus       148 ~givHrDlkp~NILl---~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~  224 (432)
T 3n9x_A          148 SGIIHRDLKPANCLL---NQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELIL  224 (432)
T ss_dssp             TTEECCCCCGGGEEE---CTTCCEEECCCTTCEEC-------------------------------CCCCCTTCCHHHHT
T ss_pred             CCCCCCCCCHHHeEE---CCCCCEEEccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHh
Confidence            999999999999999   778899999999998654321                       13556899999999986 


Q ss_pred             ccCCCCchhhhHHHHHHHHHHHh-----------CCCCCCCCCc-----------------HHHHHHHH-----------
Q 009980          217 LQDRITSKSDMWSLGVILYILLS-----------GYPPFIAQSN-----------------RQKQQMIM-----------  257 (521)
Q Consensus       217 ~~~~~~~~~DiwslG~il~~ll~-----------g~~pf~~~~~-----------------~~~~~~i~-----------  257 (521)
                      ....|+.++||||+||++|+|++           |.++|.+.+.                 ......+.           
T Consensus       225 ~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~  304 (432)
T 3n9x_A          225 LQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDL  304 (432)
T ss_dssp             TCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHH
T ss_pred             cCCCCCcccccchHHHHHHHHHhcccccccccccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHH
Confidence            45679999999999999999998           4555544331                 11111111           


Q ss_pred             -------------cCCCC---CchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCC
Q 009980          258 -------------AGEFS---FYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDS  306 (521)
Q Consensus       258 -------------~~~~~---~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~  306 (521)
                                   .....   .....++.+|+++.+||.+||..||.+|||++++|+||||....
T Consensus       305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~  369 (432)
T 3n9x_A          305 KNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVR  369 (432)
T ss_dssp             HTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTTC
T ss_pred             HhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcChhhhhcc
Confidence                         11110   11123456899999999999999999999999999999998654

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=100.00  E-value=3.9e-49  Score=388.07  Aligned_cols=259  Identities=25%  Similarity=0.418  Sum_probs=210.5

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ++|++.+.||+|+||.||+|+++.  +++.||||++........                           ...+.+|+.
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~--~~~~vavK~~~~~~~~~~---------------------------~~~~~~E~~   52 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKL--TDNLVALKEIRLEHEEGA---------------------------PCTAIREVS   52 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETT--TCCEEEEEEECC---------------------------------CCCCCCCHH
T ss_pred             CceEEEEEEcCCCCEEEEEEEECC--CCcEEEEEEEeccccccc---------------------------chhHHHHHH
Confidence            689999999999999999999987  788999999864332110                           011345888


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQANIVHRDL  168 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~~~i~H~dl  168 (521)
                      +++++     +||||+++++++.+.+..|+||||+.| +|.+++... ..+++..++.++.||+.||.|||++||+||||
T Consensus        53 ~l~~l-----~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Di  126 (324)
T 3mtl_A           53 LLKDL-----KHANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDL  126 (324)
T ss_dssp             HHSCC-----CCTTBCCEEEEEECSSCEEEEEECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSC
T ss_pred             HHHhc-----CCCCCCeeeeEEeeCCEEEEEeccccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCc
Confidence            88887     899999999999999999999999975 898888765 45999999999999999999999999999999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCccCCCC-CCcccccCCccccccccccc-CCCCchhhhHHHHHHHHHHHhCCCCCCC
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSSVEGYT-DPVVGLFGSIDYVSPEALLQ-DRITSKSDMWSLGVILYILLSGYPPFIA  246 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~  246 (521)
                      ||+||++   +.++.+||+|||++...... .......||+.|+|||++.+ ..++.++||||+||++|+|++|.+||.+
T Consensus       127 kp~NIl~---~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~  203 (324)
T 3mtl_A          127 KPQNLLI---NERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPG  203 (324)
T ss_dssp             CGGGEEE---CTTCCEEECSSSEEECC------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             CHHHEEE---CCCCCEEEccCcccccccCCccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence            9999999   77889999999999765432 22344578999999999876 5689999999999999999999999999


Q ss_pred             CCcHHHHHHHHcCCCCCch--------------------------hhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCC
Q 009980          247 QSNRQKQQMIMAGEFSFYE--------------------------QTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHP  300 (521)
Q Consensus       247 ~~~~~~~~~i~~~~~~~~~--------------------------~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~  300 (521)
                      .+..+....+......+..                          ..+..+++++++||.+||+.||.+|||++++|+||
T Consensus       204 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp  283 (324)
T 3mtl_A          204 STVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHP  283 (324)
T ss_dssp             SSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSG
T ss_pred             CCHHHHHHHHHHHhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcCh
Confidence            8887777666543222111                          12235789999999999999999999999999999


Q ss_pred             cccCCC
Q 009980          301 WVIGDS  306 (521)
Q Consensus       301 ~~~~~~  306 (521)
                      ||....
T Consensus       284 ~f~~~~  289 (324)
T 3mtl_A          284 FFLSLG  289 (324)
T ss_dssp             GGGGGC
T ss_pred             hhhhcc
Confidence            997543

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=100.00  E-value=1.2e-48  Score=377.23  Aligned_cols=260  Identities=30%  Similarity=0.544  Sum_probs=229.4

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      ....++|++.+.||+|+||.||+|++..  +++.||||++.+.....                         ......+.
T Consensus        10 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~--~~~~vaiK~~~~~~~~~-------------------------~~~~~~~~   62 (284)
T 2vgo_A           10 KFTIDDFDIGRPLGKGKFGNVYLAREKQ--NKFIMALKVLFKSQLEK-------------------------EGVEHQLR   62 (284)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEETT--TTEEEEEEEEEHHHHHH-------------------------TTCHHHHH
T ss_pred             chhhhhceeeheecCCCCeEEEEEEEcC--CCcEEEEEEEcccccch-------------------------HHHHHHHH
Confidence            3456899999999999999999999987  78899999986532110                         11235588


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      +|+.+++++     +||||+++++++.+.+..|+||||++|++|.+++...+.+++..+..++.||+.||.|||++||+|
T Consensus        63 ~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H  137 (284)
T 2vgo_A           63 REIEIQSHL-----RHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIH  137 (284)
T ss_dssp             HHHHHHHTC-----CCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred             HHHHHHhcC-----CCCCEeeEEEEEEcCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Confidence            899999998     999999999999999999999999999999999998889999999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCC
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFI  245 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~  245 (521)
                      |||||+||++   +.++.+||+|||++...... ......||+.|+|||++.+..++.++||||||+++|+|++|..||.
T Consensus       138 ~dl~p~Nil~---~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~  213 (284)
T 2vgo_A          138 RDIKPENLLM---GYKGELKIADFGWSVHAPSL-RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD  213 (284)
T ss_dssp             CCCSGGGEEE---CTTCCEEECCCTTCEECSSS-CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTC
T ss_pred             cCCCHHHEEE---cCCCCEEEecccccccCccc-ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCC
Confidence            9999999999   77789999999998765432 2344579999999999999899999999999999999999999999


Q ss_pred             CCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCC
Q 009980          246 AQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGD  305 (521)
Q Consensus       246 ~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~  305 (521)
                      ..+..+....+......++    ..+|..++++|.+||..||.+|||+.++++||||+..
T Consensus       214 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~~  269 (284)
T 2vgo_A          214 SPSHTETHRRIVNVDLKFP----PFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKAN  269 (284)
T ss_dssp             CSSHHHHHHHHHTTCCCCC----TTSCHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHHH
T ss_pred             CCCHhHHHHHHhccccCCC----CcCCHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHhh
Confidence            9888888888887766554    4589999999999999999999999999999999753

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=100.00  E-value=7.9e-49  Score=387.27  Aligned_cols=261  Identities=28%  Similarity=0.468  Sum_probs=220.3

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      ..+.++|++.+.||+|+||.||+|+++.  +++.||||++.+.......                    .........+.
T Consensus        20 ~~~~~~y~~~~~lG~G~~g~Vy~a~~~~--~~~~vavK~~~~~~~~~~~--------------------~~~~~~~~~~~   77 (335)
T 3dls_A           20 GEYSQKYSTMSPLGSGAFGFVWTAVDKE--KNKEVVVKFIKKEKVLEDC--------------------WIEDPKLGKVT   77 (335)
T ss_dssp             THHHHHEEEEEECSSSSSCSEEEEEETT--TTEEEEEEEEESTTSCTTS--------------------EEEETTTEEEE
T ss_pred             cccccceEEEeEEEecCCEEEEEEEECC--CCcEEEEEEEehhhccccc--------------------ccchHHHHHHH
Confidence            3567899999999999999999999988  7899999999865432210                    00001122356


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCC-chHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGG-ELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIV  164 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg-~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~  164 (521)
                      +|+.+++++     +||||+++++++.+.+.+|+||||+.+| +|.+++...+.+++..+..++.||+.||.|||++||+
T Consensus        78 ~E~~~l~~l-----~h~~Iv~~~~~~~~~~~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iv  152 (335)
T 3dls_A           78 LEIAILSRV-----EHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDII  152 (335)
T ss_dssp             HHHHHHTTC-----CCTTBCCEEEEEECSSEEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHhC-----CCCCEeeEEEEEeeCCEEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeE
Confidence            799999988     9999999999999999999999999776 9999999988999999999999999999999999999


Q ss_pred             eccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCC-CchhhhHHHHHHHHHHHhCCCC
Q 009980          165 HRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRI-TSKSDMWSLGVILYILLSGYPP  243 (521)
Q Consensus       165 H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~~ll~g~~p  243 (521)
                      ||||||+|||+   +.++.+||+|||++............+||+.|+|||++.+..+ +.++|||||||++|+|++|..|
T Consensus       153 H~Dlkp~NIll---~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~p  229 (335)
T 3dls_A          153 HRDIKDENIVI---AEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENP  229 (335)
T ss_dssp             CSCCSGGGEEE---CTTSCEEECCCTTCEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCS
T ss_pred             EeccCHHHEEE---cCCCcEEEeecccceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCc
Confidence            99999999999   7788999999999987665555566789999999999988777 8899999999999999999999


Q ss_pred             CCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCC
Q 009980          244 FIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDS  306 (521)
Q Consensus       244 f~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~  306 (521)
                      |.....      .......    ....+|+++++||.+||..||.+|||+.++++||||....
T Consensus       230 f~~~~~------~~~~~~~----~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~hp~~~~~~  282 (335)
T 3dls_A          230 FCELEE------TVEAAIH----PPYLVSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQPV  282 (335)
T ss_dssp             CSSGGG------GTTTCCC----CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHCTTTTCCC
T ss_pred             hhhHHH------HHhhccC----CCcccCHHHHHHHHHHccCChhhCcCHHHHhcCccccCCc
Confidence            976322      1111111    1245899999999999999999999999999999998644

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=100.00  E-value=3.6e-48  Score=375.93  Aligned_cols=263  Identities=30%  Similarity=0.472  Sum_probs=231.7

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      ....++|++.+.||+|+||.||+|.++.  +++.||+|++.+.....                         ......+.
T Consensus        11 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~--~~~~~a~K~~~~~~~~~-------------------------~~~~~~~~   63 (294)
T 2rku_A           11 PRSRRRYVRGRFLGKGGFAKCFEISDAD--TKEVFAGKIVPKSLLLK-------------------------PHQREKMS   63 (294)
T ss_dssp             TTTTEEEEEEEEEEEETTEEEEEEEETT--TCCEEEEEEEEGGGCCS-------------------------HHHHHHHH
T ss_pred             CCcccceEEEEEEeecCCEEEEEEEECC--CCceEEEEEechhhccC-------------------------HHHHHHHH
Confidence            3567899999999999999999999987  78899999997543211                         12345678


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      +|+.+++++     +||||+++++++.+.+..|+||||+.|++|.+++...+.+++..+..++.||+.||.|||++||+|
T Consensus        64 ~e~~~l~~l-----~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H  138 (294)
T 2rku_A           64 MEISIHRSL-----AHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIH  138 (294)
T ss_dssp             HHHHHHHTC-----CCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             HHHHHHHhC-----CCCCEeeeeeeeccCCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence            899999988     999999999999999999999999999999999988889999999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCCCC-CCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCC
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGYT-DPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF  244 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf  244 (521)
                      |||||+||++   +.++.+||+|||++...... .......||+.|+|||++.+..++.++||||||+++|+|++|..||
T Consensus       139 ~dl~p~Nil~---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~  215 (294)
T 2rku_A          139 RDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF  215 (294)
T ss_dssp             CCCCGGGEEE---CTTCCEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred             cCCChHhEEE---cCCCCEEEEeccCceecccCccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence            9999999999   77889999999999765432 2234457999999999999888999999999999999999999999


Q ss_pred             CCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCCC
Q 009980          245 IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSA  307 (521)
Q Consensus       245 ~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~~  307 (521)
                      ......+....+.......+    ..+++.+.++|.+||..||.+|||+.++++||||.....
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~~  274 (294)
T 2rku_A          216 ETSCLKETYLRIKKNEYSIP----KHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYI  274 (294)
T ss_dssp             CCSSHHHHHHHHHTTCCCCC----TTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSCC
T ss_pred             CCCCHHHHHHHHhhccCCCc----cccCHHHHHHHHHHcccChhhCcCHHHHhhChheecCCc
Confidence            99888888888877766554    457999999999999999999999999999999986543

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.4e-48  Score=387.74  Aligned_cols=272  Identities=26%  Similarity=0.368  Sum_probs=214.5

Q ss_pred             CCccccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCcccccccccccccc
Q 009980            1 MGQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVS   80 (521)
Q Consensus         1 ~~~~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (521)
                      |........++|++.+.||+|+||.||+|+++.  +++.||||++........                       ....
T Consensus         1 m~l~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~--~~~~vavK~~~~~~~~~~-----------------------~~~~   55 (346)
T 1ua2_A            1 MALDVKSRAKRYEKLDFLGEGQFATVYKARDKN--TNQIVAIKKIKLGHRSEA-----------------------KDGI   55 (346)
T ss_dssp             ------------CEEEEEEEETTEEEEEEECSS--CCSEEEEEEC-----------------------------------
T ss_pred             CchhhHHHhcccEEEeEEeecCCEEEEEEEECC--CCcEEEEEEEecCCcchh-----------------------hhhh
Confidence            455566778999999999999999999999987  788999999865322110                       0011


Q ss_pred             HHHHHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH
Q 009980           81 DALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALH  159 (521)
Q Consensus        81 ~~~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH  159 (521)
                      ...+.+|+.+++++     +||||+++++++.+.+..|+||||+.| +|.+.+... ..+++..+..++.|++.||.|||
T Consensus        56 ~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH  129 (346)
T 1ua2_A           56 NRTALREIKLLQEL-----SHPNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH  129 (346)
T ss_dssp             CTHHHHHHHHHHHC-----CCTTBCCEEEEECCTTCCEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHhhC-----CCCCCCeEEEEEeeCCceEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHH
Confidence            23477899999998     999999999999999999999999986 888888754 46899999999999999999999


Q ss_pred             HCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC-CcccccCCcccccccccccC-CCCchhhhHHHHHHHHHH
Q 009980          160 QANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALLQD-RITSKSDMWSLGVILYIL  237 (521)
Q Consensus       160 ~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~~l  237 (521)
                      ++||+||||||+||++   +.++.+||+|||+++...... .....+||+.|+|||++.+. .++.++|||||||++|+|
T Consensus       130 ~~~ivH~Dlkp~Nil~---~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el  206 (346)
T 1ua2_A          130 QHWILHRDLKPNNLLL---DENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAEL  206 (346)
T ss_dssp             HTTCCCCCCCGGGEEE---CTTCCEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHH
T ss_pred             HCCEECCCCCHHHEEE---cCCCCEEEEecccceeccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHH
Confidence            9999999999999999   778899999999998654322 33456799999999998654 589999999999999999


Q ss_pred             HhCCCCCCCCCcHHHHHHHHcCCCCCch------------------------hhhhccCHHHHHHHHHhccCCCCCCCCH
Q 009980          238 LSGYPPFIAQSNRQKQQMIMAGEFSFYE------------------------QTWKNISSSAKQLISSLLTVDPNRRPSA  293 (521)
Q Consensus       238 l~g~~pf~~~~~~~~~~~i~~~~~~~~~------------------------~~~~~~s~~~~~li~~~l~~dp~~R~t~  293 (521)
                      ++|.+||.+.+..+....+.........                        ..+..+++++++||.+||..||.+|||+
T Consensus       207 l~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~  286 (346)
T 1ua2_A          207 LLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITA  286 (346)
T ss_dssp             HHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCH
T ss_pred             HHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCH
Confidence            9999999998887777766543211111                        1235678999999999999999999999


Q ss_pred             HHHHcCCcccCCC
Q 009980          294 QELLNHPWVIGDS  306 (521)
Q Consensus       294 ~~~l~h~~~~~~~  306 (521)
                      .++|+||||....
T Consensus       287 ~ell~h~~f~~~~  299 (346)
T 1ua2_A          287 TQALKMKYFSNRP  299 (346)
T ss_dssp             HHHHTSGGGTSSS
T ss_pred             HHHhcChhhhcCC
Confidence            9999999998654

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=100.00  E-value=1.7e-48  Score=378.02  Aligned_cols=265  Identities=25%  Similarity=0.372  Sum_probs=221.8

Q ss_pred             cccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHH
Q 009980            4 ETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDAL   83 (521)
Q Consensus         4 ~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (521)
                      .+..+.++|++.+.||+|+||.||+|++..  +++.||+|++.......                         ......
T Consensus         5 ~g~~~~~~y~i~~~lg~G~~g~V~~~~~~~--~~~~vaiK~~~~~~~~~-------------------------~~~~~~   57 (294)
T 4eqm_A            5 IGKIINERYKIVDKLGGGGMSTVYLAEDTI--LNIKVAIKAIFIPPREK-------------------------EETLKR   57 (294)
T ss_dssp             CSSCEETTEEEEEEEEEETTEEEEEEEETT--TCSEEEEEEEECCSSCC-------------------------HHHHHH
T ss_pred             hhhHhhccEEEEEEEccCCCEEEEEEEECC--CCCeEEEEEeccCcccc-------------------------HHHHHH
Confidence            356788999999999999999999999987  78899999986532211                         122345


Q ss_pred             HHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 009980           84 LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANI  163 (521)
Q Consensus        84 ~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i  163 (521)
                      +.+|+.+++++     +||||+++++++.+++.+|+||||++|++|.+++...+++++..+..++.||+.||.|||++||
T Consensus        58 ~~~e~~~l~~l-----~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i  132 (294)
T 4eqm_A           58 FEREVHNSSQL-----SHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRI  132 (294)
T ss_dssp             HHHHHHHHTTC-----CBTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHhcC-----CCCCCceEEEeeeeCCeEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            78899999888     9999999999999999999999999999999999988899999999999999999999999999


Q ss_pred             eeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC--CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCC
Q 009980          164 VHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD--PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGY  241 (521)
Q Consensus       164 ~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~  241 (521)
                      +||||||+||++   +.++.+||+|||++.......  .....+||+.|+|||++.+..++.++||||||+++|+|++|.
T Consensus       133 ~H~Dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~  209 (294)
T 4eqm_A          133 VHRDIKPQNILI---DSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGE  209 (294)
T ss_dssp             CCCCCCGGGEEE---CTTSCEEECCCSSSTTC-------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSS
T ss_pred             ccCCCCHHHEEE---CCCCCEEEEeCCCccccccccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCC
Confidence            999999999999   778899999999998654332  223456999999999999999999999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHHcCCCCCc-hhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCccc
Q 009980          242 PPFIAQSNRQKQQMIMAGEFSFY-EQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVI  303 (521)
Q Consensus       242 ~pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~  303 (521)
                      +||.+.+.............+.. ......+|+.+.++|.+||..||.+||+..+.+.+.|..
T Consensus       210 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~  272 (294)
T 4eqm_A          210 PPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSS  272 (294)
T ss_dssp             CSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHT
T ss_pred             CCCCCCChHHHHHHHhhccCCCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHH
Confidence            99999887776666655544332 344567999999999999999999999666666666543

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=100.00  E-value=1.9e-48  Score=384.50  Aligned_cols=263  Identities=25%  Similarity=0.400  Sum_probs=218.6

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      ...++|++.+.||+|+||.||+|+++.  +++.||||++......                          ......+.+
T Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~--~~~~vavK~~~~~~~~--------------------------~~~~~~~~~   73 (331)
T 4aaa_A           22 QSMEKYENLGLVGEGSYGMVMKCRNKD--TGRIVAIKKFLESDDD--------------------------KMVKKIAMR   73 (331)
T ss_dssp             BCGGGEEEEEEGGGGTTSSEEEEEETT--TCCEEEEEEEESCSSC--------------------------HHHHHHHHH
T ss_pred             hhhhhheeeeEEeecCCEEEEEEEECC--CCceEEEEEEecCCCc--------------------------hHHHHHHHH
Confidence            456899999999999999999999987  7889999998653221                          122345778


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHR  166 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~  166 (521)
                      |+.+++++     +||||+++++++.+.+..|+||||+.|++|.+++...+.+++..+..++.||+.||.|||++||+||
T Consensus        74 E~~~l~~l-----~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~  148 (331)
T 4aaa_A           74 EIKLLKQL-----RHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHR  148 (331)
T ss_dssp             HHHHHHHC-----CCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred             HHHHHhhC-----CCCCEeeEEEEeecCCEEEEEEecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCEEcc
Confidence            99999998     9999999999999999999999999999998888877889999999999999999999999999999


Q ss_pred             cCCCCcEEEeeCCCCCCEEEeecCCCccCCCC-CCcccccCCcccccccccccC-CCCchhhhHHHHHHHHHHHhCCCCC
Q 009980          167 DLKPENCLFLNDREDSPLKIMDFGLSSVEGYT-DPVVGLFGSIDYVSPEALLQD-RITSKSDMWSLGVILYILLSGYPPF  244 (521)
Q Consensus       167 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~~ll~g~~pf  244 (521)
                      ||||+||++   +.++.+||+|||++...... .......||+.|+|||++.+. .++.++|||||||++|+|++|.+||
T Consensus       149 dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf  225 (331)
T 4aaa_A          149 DIKPENILV---SQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLF  225 (331)
T ss_dssp             CCCGGGEEE---CTTSCEEECCCTTC------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred             CcChheEEE---cCCCcEEEEeCCCceeecCCccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCC
Confidence            999999999   77889999999999764432 233455799999999999865 6899999999999999999999999


Q ss_pred             CCCCcHHHHHHHHcCCCCC---------------------------chhhhhccCHHHHHHHHHhccCCCCCCCCHHHHH
Q 009980          245 IAQSNRQKQQMIMAGEFSF---------------------------YEQTWKNISSSAKQLISSLLTVDPNRRPSAQELL  297 (521)
Q Consensus       245 ~~~~~~~~~~~i~~~~~~~---------------------------~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l  297 (521)
                      .+.+..+....+.......                           ....++.+|+.+.+||.+||..||.+|||+.++|
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell  305 (331)
T 4aaa_A          226 PGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELL  305 (331)
T ss_dssp             CCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGG
T ss_pred             CCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHh
Confidence            9888776655544321111                           1122346899999999999999999999999999


Q ss_pred             cCCcccCC
Q 009980          298 NHPWVIGD  305 (521)
Q Consensus       298 ~h~~~~~~  305 (521)
                      +||||+..
T Consensus       306 ~hp~f~~~  313 (331)
T 4aaa_A          306 HHDFFQMD  313 (331)
T ss_dssp             GSHHHHGG
T ss_pred             cCchhccC
Confidence            99999753

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=100.00  E-value=4.1e-48  Score=382.57  Aligned_cols=262  Identities=30%  Similarity=0.475  Sum_probs=230.9

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      ...++|++.+.||+|+||.||+|+++.  +++.||+|++.+.....                         ......+.+
T Consensus        38 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~--~~~~~a~K~~~~~~~~~-------------------------~~~~~~~~~   90 (335)
T 2owb_A           38 RSRRRYVRGRFLGKGGFAKCFEISDAD--TKEVFAGKIVPKSLLLK-------------------------PHQREKMSM   90 (335)
T ss_dssp             TTTEEEEEEEEEEEETTEEEEEEEETT--TCCEEEEEEEEGGGCCS-------------------------HHHHHHHHH
T ss_pred             ccCCceEEEEEEeeCCCeEEEEEEECC--CCCEEEEEEechhhhcC-------------------------HHHHHHHHH
Confidence            456799999999999999999999987  78899999997543211                         123455788


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHR  166 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~  166 (521)
                      |+.+++++     +||||+++++++.+.+.+|+||||+.|++|.+++.....+++.++..++.||+.||.|||++||+||
T Consensus        91 E~~~l~~l-----~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~  165 (335)
T 2owb_A           91 EISIHRSL-----AHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHR  165 (335)
T ss_dssp             HHHHHHTC-----CCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred             HHHHHHhC-----CCCCCCeEEEEEecCCeEEEEEecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCEec
Confidence            99999988     9999999999999999999999999999999999888899999999999999999999999999999


Q ss_pred             cCCCCcEEEeeCCCCCCEEEeecCCCccCCCC-CCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCC
Q 009980          167 DLKPENCLFLNDREDSPLKIMDFGLSSVEGYT-DPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFI  245 (521)
Q Consensus       167 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~  245 (521)
                      ||||+||++   +.++.+||+|||++...... .......||+.|+|||++.+..++.++||||||+++|+|++|..||.
T Consensus       166 dlkp~NIl~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~  242 (335)
T 2owb_A          166 DLKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE  242 (335)
T ss_dssp             CCCGGGEEE---CTTCCEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTC
T ss_pred             CCCchhEEE---cCCCCEEEeeccCceecccCcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCC
Confidence            999999999   77889999999999865422 23344579999999999998889999999999999999999999999


Q ss_pred             CCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCCC
Q 009980          246 AQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSA  307 (521)
Q Consensus       246 ~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~~  307 (521)
                      .....+....+.......+    ..+++.+.+||.+||..||.+|||+.++++||||.....
T Consensus       243 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~ell~~~~~~~~~~  300 (335)
T 2owb_A          243 TSCLKETYLRIKKNEYSIP----KHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYI  300 (335)
T ss_dssp             CSSHHHHHHHHHHTCCCCC----TTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSCC
T ss_pred             CCCHHHHHHHHhcCCCCCC----ccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccCCCc
Confidence            8888888877777766554    457999999999999999999999999999999986543

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=100.00  E-value=1.7e-47  Score=372.88  Aligned_cols=280  Identities=26%  Similarity=0.427  Sum_probs=235.2

Q ss_pred             ccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHH
Q 009980            5 TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALL   84 (521)
Q Consensus         5 ~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (521)
                      .....+.|++.+.||+|+||.||+|+++.  +++.||||++......                           .....+
T Consensus        17 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~--~~~~vaiK~~~~~~~~---------------------------~~~~~~   67 (303)
T 3a7i_A           17 KADPEELFTKLEKIGKGSFGEVFKGIDNR--TQKVVAIKIIDLEEAE---------------------------DEIEDI   67 (303)
T ss_dssp             EECGGGTEEEEEEEEECSSSEEEEEEETT--TCCEEEEEEEETTTCS---------------------------TTHHHH
T ss_pred             CCChHHHHHHhhhhcccCCeEEEEEEECC--CCcEEEEEEecccccH---------------------------HHHHHH
Confidence            34566789999999999999999999987  7889999999753221                           123568


Q ss_pred             HHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 009980           85 TNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIV  164 (521)
Q Consensus        85 ~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~  164 (521)
                      .+|+.+++++     +||||+++++++.+...+|+||||+.|++|.+++.. +.+++..+..++.||+.||.|||++||+
T Consensus        68 ~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~  141 (303)
T 3a7i_A           68 QQEITVLSQC-----DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKKI  141 (303)
T ss_dssp             HHHHHHHHHC-----CCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHhC-----CCCCEeEEEEEEecCCeEEEEEEeCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCc
Confidence            8999999998     999999999999999999999999999999998865 6799999999999999999999999999


Q ss_pred             eccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC-CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCC
Q 009980          165 HRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPP  243 (521)
Q Consensus       165 H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~p  243 (521)
                      ||||||+||++   +.++.+||+|||++....... ......||+.|+|||++.+..++.++||||||+++|+|++|.+|
T Consensus       142 H~dl~p~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p  218 (303)
T 3a7i_A          142 HRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP  218 (303)
T ss_dssp             CCCCSGGGEEE---CTTSCEEECCCTTCEECBTTBCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCT
T ss_pred             cCCCChheEEE---CCCCCEEEeecccceecCccccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCC
Confidence            99999999999   778899999999997654322 23445799999999999988999999999999999999999999


Q ss_pred             CCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCCCcchhchHHHHHHHHhH
Q 009980          244 FIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAKEEEMDAEIVSRLQSF  323 (521)
Q Consensus       244 f~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~~~~~~~~~~~~~~~~~~  323 (521)
                      |...........+..+....   ....++..+.+||.+||..||.+|||+.++++||||........ ...+++.+.+.+
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~~~~-~~~~~~~~~~~~  294 (303)
T 3a7i_A          219 HSELHPMKVLFLIPKNNPPT---LEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKTS-YLTELIDRYKRW  294 (303)
T ss_dssp             TTTSCHHHHHHHHHHSCCCC---CCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHHHHHHCCCGG-GGHHHHHHHHHH
T ss_pred             CCCcCHHHHHHHhhcCCCCC---CccccCHHHHHHHHHHcCCChhhCcCHHHHhhChhhhcCCCccH-HHHHHHHHHHHh
Confidence            98888777776666554332   22568999999999999999999999999999999976544332 334555555555


Q ss_pred             HHH
Q 009980          324 NAR  326 (521)
Q Consensus       324 ~~~  326 (521)
                      ++.
T Consensus       295 ~~~  297 (303)
T 3a7i_A          295 KAE  297 (303)
T ss_dssp             HHH
T ss_pred             hhh
Confidence            443

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=100.00  E-value=2.1e-48  Score=394.86  Aligned_cols=269  Identities=26%  Similarity=0.437  Sum_probs=203.5

Q ss_pred             ccccccccceee-cccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccH
Q 009980            3 QETRKLTDEYEV-TDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSD   81 (521)
Q Consensus         3 ~~~~~~~~~Y~~-~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (521)
                      .+.+.+.+.|++ +++||+|+||.||+|+++...+++.||||++.....                              .
T Consensus        13 ~~~~~~~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~------------------------------~   62 (405)
T 3rgf_A           13 SERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI------------------------------S   62 (405)
T ss_dssp             HHCCCHHHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC------------------------------C
T ss_pred             hhhhhhhhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC------------------------------C
Confidence            356778889998 458999999999999987655788999999864221                              1


Q ss_pred             HHHHHHHHHHHHHhhccCCCCCccceeEEEEe--CCeEEEEEeccCCCchHHHHHhc---------CCCCHHHHHHHHHH
Q 009980           82 ALLTNEILVMRKIVENVSPHPNVIDLYDVYED--QNGVHLILELCSGGELFDRIVAQ---------ERYMEVGAAAVIRQ  150 (521)
Q Consensus        82 ~~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~--~~~~~lv~e~~~gg~L~~~l~~~---------~~~~~~~~~~i~~q  150 (521)
                      ..+.+|+.+++++     +||||+++++++..  ...+|+||||+.| +|.+.+...         ..+++..++.++.|
T Consensus        63 ~~~~~E~~~l~~l-----~hpniv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~q  136 (405)
T 3rgf_A           63 MSACREIALLREL-----KHPNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQ  136 (405)
T ss_dssp             HHHHHHHHHHHHC-----CCTTBCCCCEEEEETTTTEEEEEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhc-----CCCCeeeEeeEEecCCCCeEEEEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHH
Confidence            3477899999999     99999999999965  6789999999975 888877532         24999999999999


Q ss_pred             HHHHHHHHHHCCCeeccCCCCcEEEeeC-CCCCCEEEeecCCCccCCCC----CCcccccCCcccccccccccC-CCCch
Q 009980          151 IAEGLAALHQANIVHRDLKPENCLFLND-REDSPLKIMDFGLSSVEGYT----DPVVGLFGSIDYVSPEALLQD-RITSK  224 (521)
Q Consensus       151 il~al~~lH~~~i~H~dlkp~Nil~~~~-~~~~~~kl~Dfg~a~~~~~~----~~~~~~~gt~~y~aPE~~~~~-~~~~~  224 (521)
                      |+.||.|||++||+||||||+|||+..+ +..+.+||+|||+|+.....    ......+||+.|+|||++.+. .|+.+
T Consensus       137 i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  216 (405)
T 3rgf_A          137 ILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKA  216 (405)
T ss_dssp             HHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHH
T ss_pred             HHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccch
Confidence            9999999999999999999999999543 45678999999999865432    223446799999999999874 58999


Q ss_pred             hhhHHHHHHHHHHHhCCCCCCCCCcH---------HHHHHHHcCCCCCchhhhhc-------------------------
Q 009980          225 SDMWSLGVILYILLSGYPPFIAQSNR---------QKQQMIMAGEFSFYEQTWKN-------------------------  270 (521)
Q Consensus       225 ~DiwslG~il~~ll~g~~pf~~~~~~---------~~~~~i~~~~~~~~~~~~~~-------------------------  270 (521)
                      +|||||||++|+|++|.+||.+....         +....+......+....|..                         
T Consensus       217 ~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (405)
T 3rgf_A          217 IDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLI  296 (405)
T ss_dssp             HHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHH
T ss_pred             hhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhh
Confidence            99999999999999999999765542         33333332211111111211                         


Q ss_pred             ---------cCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCCC
Q 009980          271 ---------ISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSA  307 (521)
Q Consensus       271 ---------~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~~  307 (521)
                               .++.+.+||.+||..||.+|||++++|+||||.....
T Consensus       297 ~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~~~~~  342 (405)
T 3rgf_A          297 KYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDPL  342 (405)
T ss_dssp             HHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTSSSC
T ss_pred             hhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhccCCC
Confidence                     2778999999999999999999999999999987543

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=100.00  E-value=1.4e-48  Score=375.73  Aligned_cols=261  Identities=31%  Similarity=0.535  Sum_probs=197.8

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      ...++|++.+.||+|+||.||+|++..  +++.||||++.+.....                         ......+.+
T Consensus         8 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~--~~~~vavK~~~~~~~~~-------------------------~~~~~~~~~   60 (278)
T 3cok_A            8 EKIEDFKVGNLLGKGSFAGVYRAESIH--TGLEVAIKMIDKKAMYK-------------------------AGMVQRVQN   60 (278)
T ss_dssp             SSGGGEEEEEEEEECSSEEEEEEEETT--TCCEEEEEEEEHHHHHH-------------------------TTCHHHHHH
T ss_pred             cccccceeeeeecCCCceEEEEEEEcc--CCceEEEEEeehhhhhh-------------------------hhHHHHHHH
Confidence            345789999999999999999999987  78899999996532110                         012345788


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      |+.+++++     +||||+++++++.+.+..|+||||+++++|.+++... ..+++..+..++.|++.||.|||++||+|
T Consensus        61 e~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H  135 (278)
T 3cok_A           61 EVKIHCQL-----KHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILH  135 (278)
T ss_dssp             HHHHHTTB-----CCTTBCCEEEEEECSSEEEEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             HHHHHHhC-----CCCCeEeEEEEEccCCeEEEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence            99999888     9999999999999999999999999999999998865 67999999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCCCC-CCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCC
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGYT-DPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF  244 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf  244 (521)
                      |||||+||++   +.++.+||+|||++...... .......||+.|+|||++.+..++.++||||||+++|+|++|.+||
T Consensus       136 ~dl~p~Nili---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~  212 (278)
T 3cok_A          136 RDLTLSNLLL---TRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPF  212 (278)
T ss_dssp             SSCCGGGEEE---CTTCCEEECCCTTCEECC----------------------------CTHHHHHHHHHHHHHHSSCSS
T ss_pred             CCCCHHHEEE---cCCCCEEEEeecceeeccCCCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence            9999999999   77889999999999865422 2233457999999999999888999999999999999999999999


Q ss_pred             CCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCC
Q 009980          245 IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDS  306 (521)
Q Consensus       245 ~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~  306 (521)
                      ...+.......+.......+    ..+|.+++++|.+||..||.+|||+.++++||||....
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~  270 (278)
T 3cok_A          213 DTDTVKNTLNKVVLADYEMP----SFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRNS  270 (278)
T ss_dssp             CCCSCC-----CCSSCCCCC----TTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSTTTC---
T ss_pred             CChhHHHHHHHHhhcccCCc----cccCHHHHHHHHHHcccCHhhCCCHHHHhcCccccCCC
Confidence            88776655554443333322    45899999999999999999999999999999998644

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=100.00  E-value=8e-48  Score=381.76  Aligned_cols=263  Identities=27%  Similarity=0.412  Sum_probs=212.8

Q ss_pred             cccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHH
Q 009980            4 ETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDAL   83 (521)
Q Consensus         4 ~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (521)
                      ......++|++.+.||+|+||.||+|.+.   +++.||||++......                          ......
T Consensus         3 ~i~~~~~~y~i~~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~--------------------------~~~~~~   53 (343)
T 3dbq_A            3 CISVKGRIYSILKQIGSGGSSKVFQVLNE---KKQIYAIKYVNLEEAD--------------------------NQTLDS   53 (343)
T ss_dssp             CEESSSCEEEEEEEESCCSSEEEEEEECT---TSCEEEEEEEECTTCC--------------------------HHHHHH
T ss_pred             eeeeecCEEEEEEEEecCCCeEEEEEEeC---CCCEEEEEEeeccccc--------------------------hHHHHH
Confidence            34556788999999999999999999885   5788999999753221                          122355


Q ss_pred             HHHHHHHHHHHhhccCCC--CCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Q 009980           84 LTNEILVMRKIVENVSPH--PNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQA  161 (521)
Q Consensus        84 ~~~E~~~l~~l~~~~~~h--pniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~  161 (521)
                      +.+|+.+++++     .|  |||+++++++.+++.+|+||| +.+++|.+++...+.+++.++..++.||+.||.|||++
T Consensus        54 ~~~E~~~l~~l-----~~~~~~iv~~~~~~~~~~~~~lv~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~  127 (343)
T 3dbq_A           54 YRNEIAYLNKL-----QQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH  127 (343)
T ss_dssp             HHHHHHHHHHH-----TTTCTTBCCEEEEEECSSEEEEEEC-CCSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHhh-----hhcCCceEEEeeeEeeCCEEEEEEe-CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            78999999999     55  999999999999999999999 55889999999999999999999999999999999999


Q ss_pred             CCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC---cccccCCccccccccccc-----------CCCCchhhh
Q 009980          162 NIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALLQ-----------DRITSKSDM  227 (521)
Q Consensus       162 ~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-----------~~~~~~~Di  227 (521)
                      ||+||||||+|||+.    ++.+||+|||+|+.......   ....+||+.|+|||++.+           ..++.++||
T Consensus       128 ~iiHrDikp~NIll~----~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di  203 (343)
T 3dbq_A          128 GIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDV  203 (343)
T ss_dssp             TCCCCCCCGGGEEEE----TTEEEECCCSSSCCC------------CCCCSSCCHHHHHHCC-----------CCHHHHH
T ss_pred             CeecCCCCcceEEEE----CCcEEEeecccccccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhH
Confidence            999999999999992    46799999999986543322   234579999999999865           678999999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCcH-HHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCC
Q 009980          228 WSLGVILYILLSGYPPFIAQSNR-QKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDS  306 (521)
Q Consensus       228 wslG~il~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~  306 (521)
                      |||||++|+|++|.+||...... .....+........  .....++++.+||.+||..||.+|||+.++|+||||+...
T Consensus       204 wslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~~  281 (343)
T 3dbq_A          204 WSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIE--FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT  281 (343)
T ss_dssp             HHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCC--CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSCC
T ss_pred             HHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCcccC--CcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCccccccC
Confidence            99999999999999999775443 33344443332221  2244678999999999999999999999999999998654


Q ss_pred             C
Q 009980          307 A  307 (521)
Q Consensus       307 ~  307 (521)
                      .
T Consensus       282 ~  282 (343)
T 3dbq_A          282 H  282 (343)
T ss_dssp             C
T ss_pred             C
Confidence            3

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=100.00  E-value=1.7e-48  Score=389.37  Aligned_cols=264  Identities=27%  Similarity=0.424  Sum_probs=203.8

Q ss_pred             ccccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHH
Q 009980            3 QETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDA   82 (521)
Q Consensus         3 ~~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (521)
                      +..-.+.++|++.+.||+|+||.||+|.++.  +++.||||++......                          .....
T Consensus        22 ~~~~~~~~~y~~~~~lG~G~~g~V~~a~~~~--~~~~vaiK~~~~~~~~--------------------------~~~~~   73 (367)
T 2fst_X           22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK--TGLRVAVKKLSRPFQS--------------------------IIHAK   73 (367)
T ss_dssp             TEEEEEETTEEEEEECC----CCEEEEEETT--TTEEEEEEECSSTTSS--------------------------HHHHH
T ss_pred             CcccCCCCceEEeeEEeecCCeEEEEEEECC--CCCEEEEEEeCccccC--------------------------HHHHH
Confidence            3445677899999999999999999999987  7899999998642110                          12345


Q ss_pred             HHHHHHHHHHHHhhccCCCCCccceeEEEEeC------CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 009980           83 LLTNEILVMRKIVENVSPHPNVIDLYDVYEDQ------NGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLA  156 (521)
Q Consensus        83 ~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~------~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~  156 (521)
                      .+.+|+.+++.+     +||||+++++++...      ..+|+|||++ |++|.+++.. ..+++..+..++.||+.||.
T Consensus        74 ~~~~E~~~l~~l-----~hpnIv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~  146 (367)
T 2fst_X           74 RTYRELRLLKHM-----KHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKC-QKLTDDHVQFLIYQILRGLK  146 (367)
T ss_dssp             HHHHHHHHHHHC-----CCTTBCCCSEEECSCSSGGGCCCCEEEEECC-CEECC------CCCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhC-----CCCCCCcEEEEEecCCccccCCeEEEEeccc-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHH
Confidence            577899999998     999999999999754      5689999999 7899888765 67999999999999999999


Q ss_pred             HHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCccccccccccc-CCCCchhhhHHHHHHHH
Q 009980          157 ALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQ-DRITSKSDMWSLGVILY  235 (521)
Q Consensus       157 ~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~  235 (521)
                      |||++||+||||||+|||+   +.++.+||+|||+|+....  ......||+.|+|||++.+ ..++.++||||+||++|
T Consensus       147 ~LH~~givH~Dlkp~NIll---~~~~~~kL~DFG~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~  221 (367)
T 2fst_X          147 YIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARHTAD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA  221 (367)
T ss_dssp             HHHHTTCCCCCCCGGGEEE---CTTCCEEECC-----------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHH
T ss_pred             HHHHCCeeeCCCCHhhEEE---CCCCCEEEeeccccccccc--cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHH
Confidence            9999999999999999999   7788999999999986542  2345679999999999876 67899999999999999


Q ss_pred             HHHhCCCCCCCCCcHHHHHHHHcCCCCCc---------------------------hhhhhccCHHHHHHHHHhccCCCC
Q 009980          236 ILLSGYPPFIAQSNRQKQQMIMAGEFSFY---------------------------EQTWKNISSSAKQLISSLLTVDPN  288 (521)
Q Consensus       236 ~ll~g~~pf~~~~~~~~~~~i~~~~~~~~---------------------------~~~~~~~s~~~~~li~~~l~~dp~  288 (521)
                      +|++|++||.+.+.......+......+.                           ...+..+++.+++||.+||..||.
T Consensus       222 ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~  301 (367)
T 2fst_X          222 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD  301 (367)
T ss_dssp             HHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGG
T ss_pred             HHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcc
Confidence            99999999998887766665543211111                           122345789999999999999999


Q ss_pred             CCCCHHHHHcCCcccCCC
Q 009980          289 RRPSAQELLNHPWVIGDS  306 (521)
Q Consensus       289 ~R~t~~~~l~h~~~~~~~  306 (521)
                      +|||+.++|+||||....
T Consensus       302 ~R~t~~e~L~hp~~~~~~  319 (367)
T 2fst_X          302 KRITAAQALAHAYFAQYH  319 (367)
T ss_dssp             GSCCHHHHHTSGGGTTTC
T ss_pred             cCcCHHHHhcChhhhhcc
Confidence            999999999999998643

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=100.00  E-value=7e-48  Score=370.28  Aligned_cols=262  Identities=29%  Similarity=0.506  Sum_probs=222.0

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      .+.++|++.+.||+|+||.||+|+++.  +++.||||++......                           .....+.+
T Consensus         4 ~~~~~y~~~~~lg~G~~g~V~~~~~~~--~~~~vavK~~~~~~~~---------------------------~~~~~~~~   54 (276)
T 2yex_A            4 PFVEDWDLVQTLGEGAYGEVQLAVNRV--TEEAVAVKIVDMKRAV---------------------------DCPENIKK   54 (276)
T ss_dssp             HHHHHEEEEEEEEECSSSEEEEEEETT--TCCEEEEEEEEGGGCT---------------------------THHHHHHH
T ss_pred             ceecceEEEEEeecCCCcEEEEEEECC--CCcEEEEEEeeeccch---------------------------hhhHHHHH
Confidence            367899999999999999999999987  7889999998653221                           12356788


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHR  166 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~  166 (521)
                      |+.+++.+     +||||+++++++.+.+..|+||||++|++|.+++.....+++..+..++.|++.||.|||++||+||
T Consensus        55 e~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~  129 (276)
T 2yex_A           55 EICINKML-----NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR  129 (276)
T ss_dssp             HHHHHHTC-----CCTTBCCEEEEEEETTEEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred             HHHHHHhc-----CCCCceeeeeEEEcCCEEEEEEEecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeecc
Confidence            99999988     9999999999999999999999999999999999887889999999999999999999999999999


Q ss_pred             cCCCCcEEEeeCCCCCCEEEeecCCCccCCCC---CCcccccCCcccccccccccCCC-CchhhhHHHHHHHHHHHhCCC
Q 009980          167 DLKPENCLFLNDREDSPLKIMDFGLSSVEGYT---DPVVGLFGSIDYVSPEALLQDRI-TSKSDMWSLGVILYILLSGYP  242 (521)
Q Consensus       167 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~~ll~g~~  242 (521)
                      ||||+||++   +.++.+||+|||++......   .......||+.|+|||++.+..+ +.++||||||+++|+|++|..
T Consensus       130 dl~p~Nil~---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~  206 (276)
T 2yex_A          130 DIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL  206 (276)
T ss_dssp             CCSGGGEEE---CTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSC
T ss_pred             CCChHHEEE---ccCCCEEEeeCCCccccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCC
Confidence            999999999   77789999999999754322   12344579999999999987765 779999999999999999999


Q ss_pred             CCCCCCcHH-HHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCCC
Q 009980          243 PFIAQSNRQ-KQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSA  307 (521)
Q Consensus       243 pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~~  307 (521)
                      ||....... ....+.......  ..+..+++.+++||.+||..||.+|||+.++++||||+....
T Consensus       207 p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~  270 (276)
T 2yex_A          207 PWDQPSDSCQEYSDWKEKKTYL--NPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLK  270 (276)
T ss_dssp             CCSCSCTTSHHHHHHHTTCTTS--TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCCC
T ss_pred             CCCCCchHHHHHHHhhhccccc--CchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcCccccChhh
Confidence            998765432 333333332222  235678999999999999999999999999999999986543

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=100.00  E-value=8.1e-48  Score=392.56  Aligned_cols=266  Identities=26%  Similarity=0.386  Sum_probs=218.4

Q ss_pred             ccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHH
Q 009980            5 TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALL   84 (521)
Q Consensus         5 ~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (521)
                      ...+..+|++.+.||+|+||.||+|+++.  +++.||||++....                             .....+
T Consensus        92 ~~~~~~ry~~~~~LG~G~fg~V~~a~~~~--~~~~vAvK~~~~~~-----------------------------~~~~~~  140 (429)
T 3kvw_A           92 HDHVAYRYEVLKVIGKGSFGQVVKAYDHK--VHQHVALKMVRNEK-----------------------------RFHRQA  140 (429)
T ss_dssp             TCEETTTEEEEEEEEESSSEEEEEEEETT--TTEEEEEEEECSCH-----------------------------HHHHHH
T ss_pred             CCcccCcEEEEEEcccCccEEEEEEEECC--CCcEEEEEEECCcc-----------------------------chHHHH
Confidence            34577889999999999999999999988  78899999985321                             123457


Q ss_pred             HHHHHHHHHHhhc-cCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC
Q 009980           85 TNEILVMRKIVEN-VSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE--RYMEVGAAAVIRQIAEGLAALHQA  161 (521)
Q Consensus        85 ~~E~~~l~~l~~~-~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~al~~lH~~  161 (521)
                      .+|+.+++.+... ..+||||+++++++...+.+|+||||+. ++|.+++....  .+++..++.++.||+.||.|||++
T Consensus       141 ~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~  219 (429)
T 3kvw_A          141 AEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN  219 (429)
T ss_dssp             HHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            7899999888432 2378899999999999999999999996 59999988754  499999999999999999999999


Q ss_pred             CCeeccCCCCcEEEeeCCCCCC--EEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh
Q 009980          162 NIVHRDLKPENCLFLNDREDSP--LKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS  239 (521)
Q Consensus       162 ~i~H~dlkp~Nil~~~~~~~~~--~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~  239 (521)
                      ||+||||||+|||+   +.++.  +||+|||+|.....  .....+||+.|+|||++.+..|+.++|||||||++|+|++
T Consensus       220 ~ivHrDlKp~NILl---~~~~~~~vkL~DFG~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt  294 (429)
T 3kvw_A          220 RIIHCDLKPENILL---KQQGRSGIKVIDFGSSCYEHQ--RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLT  294 (429)
T ss_dssp             TEECSCCSGGGEEE---SSTTSCCEEECCCTTCEETTC--CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHH
T ss_pred             CeecCCCCHHHeEE---ccCCCcceEEeecccceecCC--cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHh
Confidence            99999999999999   55554  99999999976432  3345679999999999999999999999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHHcCCCCCchh-----------------------------------------------------
Q 009980          240 GYPPFIAQSNRQKQQMIMAGEFSFYEQ-----------------------------------------------------  266 (521)
Q Consensus       240 g~~pf~~~~~~~~~~~i~~~~~~~~~~-----------------------------------------------------  266 (521)
                      |.+||.+.+..+....+......++..                                                     
T Consensus       295 G~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  374 (429)
T 3kvw_A          295 GYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWG  374 (429)
T ss_dssp             SSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHH
T ss_pred             CCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhH
Confidence            999999988777666554321111100                                                     


Q ss_pred             --hhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCCC
Q 009980          267 --TWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSA  307 (521)
Q Consensus       267 --~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~~  307 (521)
                        .....++.+.+||.+||..||.+|||+.|+|+||||+....
T Consensus       375 ~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~~~~~~  417 (429)
T 3kvw_A          375 NALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRRLP  417 (429)
T ss_dssp             HHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTTC----
T ss_pred             hhccccchHHHHHHHHHHCCCChhhCCCHHHHhCChhhccCCC
Confidence              01124788999999999999999999999999999986543

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=100.00  E-value=4.1e-48  Score=382.09  Aligned_cols=256  Identities=24%  Similarity=0.435  Sum_probs=211.0

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      .+.++|++.+.||+|+||.||+|+++.  +++.||||++......                           .....+.+
T Consensus         3 ~~~~~y~~~~~lG~G~~g~V~~a~~~~--~~~~vavK~~~~~~~~---------------------------~~~~~~~~   53 (332)
T 3qd2_B            3 RYLTDFEPIQCMGRGGFGVVFEAKNKV--DDCNYAIKRIRLPNRE---------------------------LAREKVMR   53 (332)
T ss_dssp             HHHHHEEEEEEEECC-CSEEEEEEETT--TCCEEEEEEEECCSTT---------------------------THHHHHHH
T ss_pred             hhhhcCceeeEecCCCCeEEEEEEEcC--CCcEEEEEEeecCCch---------------------------hHHHHHHH
Confidence            467899999999999999999999987  7889999999753211                           23456889


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeCC---------------------------------------------------
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQN---------------------------------------------------  115 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~~---------------------------------------------------  115 (521)
                      |+.+++++     +||||+++++++.+..                                                   
T Consensus        54 E~~~l~~l-----~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (332)
T 3qd2_B           54 EVKALAKL-----EHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQ  128 (332)
T ss_dssp             HHHHHTSC-----CCTTBCCEEEEEEECCSCHHHHHHHC-----------------------------------------
T ss_pred             HHHHHHhC-----CCCCEeeEEEEEEEeccchhhhhhhhhhhccccccccccCCCcccccccceeeccccCccccccccc
Confidence            99999998     9999999999986543                                                   


Q ss_pred             ------eEEEEEeccCCCchHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEE
Q 009980          116 ------GVHLILELCSGGELFDRIVAQER---YMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKI  186 (521)
Q Consensus       116 ------~~~lv~e~~~gg~L~~~l~~~~~---~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl  186 (521)
                            ..|+|||||+|++|.+++.....   .++..+..++.||+.||.|||++||+||||||+||++   +.++.+||
T Consensus       129 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~~kL  205 (332)
T 3qd2_B          129 PSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFF---TMDDVVKV  205 (332)
T ss_dssp             ---CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEE
T ss_pred             CCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEE---eCCCCEEE
Confidence                  38999999999999999987654   4566789999999999999999999999999999999   77789999


Q ss_pred             eecCCCccCCCCC-------------CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCcHHHH
Q 009980          187 MDFGLSSVEGYTD-------------PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQ  253 (521)
Q Consensus       187 ~Dfg~a~~~~~~~-------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~  253 (521)
                      +|||+++......             .....+||+.|+|||++.+..++.++|||||||++|+|++|..|+..  .....
T Consensus       206 ~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~--~~~~~  283 (332)
T 3qd2_B          206 GDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME--RVRII  283 (332)
T ss_dssp             CCCTTCEECSCC--------------CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH--HHHHH
T ss_pred             eecCcccccccchhhccccccccccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH--HHHHH
Confidence            9999998654331             22345799999999999999999999999999999999999877532  22233


Q ss_pred             HHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccC
Q 009980          254 QMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIG  304 (521)
Q Consensus       254 ~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~  304 (521)
                      ..+.....+   ..+...++.+++||.+||+.||.+|||+.++|+||||++
T Consensus       284 ~~~~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~f~~  331 (332)
T 3qd2_B          284 TDVRNLKFP---LLFTQKYPQEHMMVQDMLSPSPTERPEATDIIENAIFEN  331 (332)
T ss_dssp             HHHHTTCCC---HHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHHSTTCCC
T ss_pred             HHhhccCCC---cccccCChhHHHHHHHHccCCCCcCCCHHHHhhchhhhc
Confidence            333333322   234567889999999999999999999999999999974

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=100.00  E-value=1.9e-47  Score=370.12  Aligned_cols=261  Identities=22%  Similarity=0.341  Sum_probs=217.3

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      .-...|++.+.||+|+||.||+|.+..  ++..||+|++......                          ......+.+
T Consensus        23 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~--~~~~va~k~~~~~~~~--------------------------~~~~~~~~~   74 (290)
T 1t4h_A           23 NDGRFLKFDIEIGRGSFKTVYKGLDTE--TTVEVAWCELQDRKLT--------------------------KSERQRFKE   74 (290)
T ss_dssp             TTSCEEEEEEEEEECSSEEEEEEEETT--TCCEEEEEEEEGGGSC--------------------------HHHHHHHHH
T ss_pred             cCceeEEeeeeccCCCCeEEEEeEecC--CceEEEEEEecchhhC--------------------------HHHHHHHHH
Confidence            345679999999999999999999987  7889999998753321                          123456788


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEe----CCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYED----QNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQAN  162 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~----~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~  162 (521)
                      |+.+++++     +||||+++++++..    ...+|+||||++|++|.+++...+.+++..+..++.||+.||.|||++|
T Consensus        75 e~~~l~~l-----~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  149 (290)
T 1t4h_A           75 EAEMLKGL-----QHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRT  149 (290)
T ss_dssp             HHHHHTTC-----CCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSS
T ss_pred             HHHHHHhC-----CCCCeeeeeeeeccccCCCceEEEEEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCC
Confidence            99999988     99999999999876    4568999999999999999998889999999999999999999999999


Q ss_pred             --CeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhC
Q 009980          163 --IVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSG  240 (521)
Q Consensus       163 --i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g  240 (521)
                        |+||||||+||++.  ..++.+||+|||++...... ......||+.|+|||++. +.++.++||||||+++|+|++|
T Consensus       150 ~~i~H~dikp~Nil~~--~~~~~~kl~Dfg~~~~~~~~-~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g  225 (290)
T 1t4h_A          150 PPIIHRDLKCDNIFIT--GPTGSVKIGDLGLATLKRAS-FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATS  225 (290)
T ss_dssp             SCCCCSCCCGGGEEES--STTSCEEECCTTGGGGCCTT-SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHS
T ss_pred             CCEEECCCCHHHEEEE--CCCCCEEEeeCCCccccccc-ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhC
Confidence              99999999999992  26778999999999765432 334557999999999886 4699999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCC
Q 009980          241 YPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGD  305 (521)
Q Consensus       241 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~  305 (521)
                      ..||.................. +.......++++.+||.+||..||.+|||+.++++||||++.
T Consensus       226 ~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~f~~~  289 (290)
T 1t4h_A          226 EYPYSECQNAAQIYRRVTSGVK-PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQEE  289 (290)
T ss_dssp             SCTTTTCSSHHHHHHHHTTTCC-CGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC--
T ss_pred             CCCCCCcCcHHHHHHHHhccCC-ccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhCcccccC
Confidence            9999886554444333333222 223345678999999999999999999999999999999753

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=100.00  E-value=1.3e-47  Score=370.51  Aligned_cols=260  Identities=22%  Similarity=0.354  Sum_probs=214.2

Q ss_pred             ccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHH
Q 009980            5 TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALL   84 (521)
Q Consensus         5 ~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (521)
                      ...+.++|++.+.||+|+||.||+|+++.  +++.||||++.......                          .....+
T Consensus         6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~--~~~~vaiK~~~~~~~~~--------------------------~~~~~~   57 (289)
T 1x8b_A            6 KSRYTTEFHELEKIGSGEFGSVFKCVKRL--DGCIYAIKRSKKPLAGS--------------------------VDEQNA   57 (289)
T ss_dssp             CCHHHHHEEEEEEEEEETTEEEEEEEETT--TCCEEEEEEEECCCTTS--------------------------HHHHHH
T ss_pred             cccccchhhhhhhhcCCCceEEEEEEEcC--CCceEEEEEeccccccc--------------------------HHHHHH
Confidence            34577899999999999999999999987  78899999997532211                          234457


Q ss_pred             HHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH
Q 009980           85 TNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ----ERYMEVGAAAVIRQIAEGLAALHQ  160 (521)
Q Consensus        85 ~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~----~~~~~~~~~~i~~qil~al~~lH~  160 (521)
                      .+|+..+.++    .+||||+++++++.+++..|+||||++|++|.+++...    +.+++..+..++.||+.||.|||+
T Consensus        58 ~~e~~~~~~l----~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~  133 (289)
T 1x8b_A           58 LREVYAHAVL----GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS  133 (289)
T ss_dssp             HHHHHHHHHS----CSCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHh----CCCCCeeeeeeeeecCCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHh
Confidence            7788887776    48999999999999999999999999999999999765    679999999999999999999999


Q ss_pred             CCCeeccCCCCcEEEeeCC----------------CCCCEEEeecCCCccCCCCCCcccccCCcccccccccccC-CCCc
Q 009980          161 ANIVHRDLKPENCLFLNDR----------------EDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQD-RITS  223 (521)
Q Consensus       161 ~~i~H~dlkp~Nil~~~~~----------------~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~  223 (521)
                      +||+||||||+||++..+.                ....+||+|||.+......   ....||+.|+|||++.+. .++.
T Consensus       134 ~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~  210 (289)
T 1x8b_A          134 MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSP---QVEEGDSRFLANEVLQENYTHLP  210 (289)
T ss_dssp             TTEECSCCSGGGEEEC--------------------CCCEEECCCTTCEETTCS---CCCCCCGGGCCHHHHTTCCTTHH
T ss_pred             CCEeecCCCHHHEEEcCCCCCcccccccccccccCCceEEEEcccccccccCCc---cccCCCccccChhHhcCCCCCCc
Confidence            9999999999999994322                4457999999999865432   234599999999999865 5668


Q ss_pred             hhhhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCccc
Q 009980          224 KSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVI  303 (521)
Q Consensus       224 ~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~  303 (521)
                      ++|||||||++|+|++|.+|+....   ....+..+..+..   ...+|+.+.++|.+||..||.+|||+.++++||||.
T Consensus       211 ~~Di~slG~il~~l~~~~~~~~~~~---~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~  284 (289)
T 1x8b_A          211 KADIFALALTVVCAAGAEPLPRNGD---QWHEIRQGRLPRI---PQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLL  284 (289)
T ss_dssp             HHHHHHHHHHHHHHTTCCCCCSSSH---HHHHHHTTCCCCC---SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCTTC-
T ss_pred             hhhHHHHHHHHHHHhcCCCCCcchh---HHHHHHcCCCCCC---CcccCHHHHHHHHHHhCCCcccCCCHHHHhhChHhh
Confidence            9999999999999999998875442   3444555544322   256899999999999999999999999999999997


Q ss_pred             CC
Q 009980          304 GD  305 (521)
Q Consensus       304 ~~  305 (521)
                      ..
T Consensus       285 ~~  286 (289)
T 1x8b_A          285 SA  286 (289)
T ss_dssp             --
T ss_pred             hh
Confidence            54

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=100.00  E-value=1.2e-47  Score=386.46  Aligned_cols=259  Identities=27%  Similarity=0.423  Sum_probs=212.5

Q ss_pred             ccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEI   88 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   88 (521)
                      .++|++.+.||+|+||.||+|.+.   .++.||||++......                          ......+.+|+
T Consensus        55 ~~~y~~~~~LG~G~fg~Vy~~~~~---~~~~vaiK~~~~~~~~--------------------------~~~~~~~~~Ei  105 (390)
T 2zmd_A           55 GRIYSILKQIGSGGSSKVFQVLNE---KKQIYAIKYVNLEEAD--------------------------NQTLDSYRNEI  105 (390)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEECT---TCCEEEEEEEECTTCC--------------------------HHHHHHHHHHH
T ss_pred             CCceEEEEEEccCCCeEEEEEEcC---CCCEEEEEEEeccccc--------------------------HHHHHHHHHHH
Confidence            456999999999999999999886   4788999999753221                          12235588999


Q ss_pred             HHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 009980           89 LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDL  168 (521)
Q Consensus        89 ~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dl  168 (521)
                      .+++++..   .||||+++++++..++.+|+||| +.+++|.+++.....+++.++..++.||+.||.|||++||+||||
T Consensus       106 ~~l~~l~~---~~~~iv~~~~~~~~~~~~~lv~E-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDl  181 (390)
T 2zmd_A          106 AYLNKLQQ---HSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDL  181 (390)
T ss_dssp             HHHHHHTT---TCTTBCCEEEEEECSSEEEEEEE-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCC
T ss_pred             HHHHHccc---CCCeEEEEEEEEecCCEEEEEEe-cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCC
Confidence            99999811   26999999999999999999999 568899999999889999999999999999999999999999999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCccCCCCC---CcccccCCccccccccccc-----------CCCCchhhhHHHHHHH
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSSVEGYTD---PVVGLFGSIDYVSPEALLQ-----------DRITSKSDMWSLGVIL  234 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DiwslG~il  234 (521)
                      ||+|||+   + ++.+||+|||+|+......   .....+||+.|+|||++.+           ..|+.++|||||||++
T Consensus       182 kp~NIll---~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil  257 (390)
T 2zmd_A          182 KPANFLI---V-DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCIL  257 (390)
T ss_dssp             CGGGEEE---S-SSCEEECCCSSSCCC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHH
T ss_pred             CHHHEEE---E-CCeEEEEecCccccccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHH
Confidence            9999999   2 4789999999998654322   1234579999999999865           3689999999999999


Q ss_pred             HHHHhCCCCCCCCCcH-HHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCC
Q 009980          235 YILLSGYPPFIAQSNR-QKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDS  306 (521)
Q Consensus       235 ~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~  306 (521)
                      |+|++|.+||...... .....+.........+  ...+.++++||.+||..||.+|||+.++|+||||....
T Consensus       258 ~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~~  328 (390)
T 2zmd_A          258 YYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP--DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT  328 (390)
T ss_dssp             HHHHHSSCTTTTCCCHHHHHHHHHCTTSCCCCC--CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSCC
T ss_pred             HHHHHCCCcchhhhHHHHHHHHHhCccccCCCC--ccchHHHHHHHHHHcccChhhCCCHHHHhhCcCccccC
Confidence            9999999999876443 4455555554433222  34588999999999999999999999999999998654

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=4.7e-48  Score=389.28  Aligned_cols=257  Identities=24%  Similarity=0.346  Sum_probs=211.9

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      +...++|++++.||+|+||+||+|+++.  +++.||||++.....                                ...
T Consensus         3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~--~~~~vAiK~~~~~~~--------------------------------~~~   48 (383)
T 3eb0_A            3 ETSSKKYSLGKTLGTGSFGIVCEVFDIE--SGKRFALKKVLQDPR--------------------------------YKN   48 (383)
T ss_dssp             ---CTTEEEEEEEECC-CEEEEEEEETT--TCCEEEEEEEECCTT--------------------------------SCC
T ss_pred             ccccceEEEEEEEEeccCEEEEEEEECC--CCCEEEEEEEecCcc--------------------------------hHH
Confidence            3467899999999999999999999988  889999999864321                                123


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEe--------------------------------------CCeEEEEEeccCCC
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYED--------------------------------------QNGVHLILELCSGG  127 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~--------------------------------------~~~~~lv~e~~~gg  127 (521)
                      +|+.+++.+     +||||+++++++..                                      ...+++||||+.| 
T Consensus        49 ~E~~il~~l-----~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-  122 (383)
T 3eb0_A           49 RELDIMKVL-----DHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-  122 (383)
T ss_dssp             HHHHHHTTC-----CCTTBCCEEEEEEEC-------------------------------------CCEEEEEECCCSE-
T ss_pred             HHHHHHHHc-----CCCCccchhheeeecCcccccccccccccccccccccccccccccccccCCCceEEEEEEecCCc-
Confidence            689999888     99999999999844                                      3458999999985 


Q ss_pred             chHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCccc
Q 009980          128 ELFDRIV----AQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVG  203 (521)
Q Consensus       128 ~L~~~l~----~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~  203 (521)
                      +|.+.+.    ....+++..++.++.||+.||.|||++||+||||||+||++.  ..++.+||+|||+|+..........
T Consensus       123 ~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi~H~Dikp~Nil~~--~~~~~~kl~Dfg~a~~~~~~~~~~~  200 (383)
T 3eb0_A          123 TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVN--SKDNTLKLCDFGSAKKLIPSEPSVA  200 (383)
T ss_dssp             EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEEE--TTTTEEEECCCTTCEECCTTSCCCC
T ss_pred             cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCcCccCccCHHHEEEc--CCCCcEEEEECCCCcccCCCCCCcC
Confidence            7666554    457899999999999999999999999999999999999992  2467899999999987665555666


Q ss_pred             ccCCcccccccccccC-CCCchhhhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHcCCCCC-------------------
Q 009980          204 LFGSIDYVSPEALLQD-RITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSF-------------------  263 (521)
Q Consensus       204 ~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~-------------------  263 (521)
                      ..||+.|+|||++.+. .++.++||||+||++|+|++|++||.+.+..+....+.......                   
T Consensus       201 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~  280 (383)
T 3eb0_A          201 YICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPT  280 (383)
T ss_dssp             CCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCC
T ss_pred             cccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCc
Confidence            7899999999998764 48999999999999999999999999988777766665321111                   


Q ss_pred             ------chhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccC
Q 009980          264 ------YEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIG  304 (521)
Q Consensus       264 ------~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~  304 (521)
                            .......+|+++++||.+||..||.+|||+.++|+||||..
T Consensus       281 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~  327 (383)
T 3eb0_A          281 LKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDH  327 (383)
T ss_dssp             CCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGHH
T ss_pred             cCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCHHHHH
Confidence                  01122357899999999999999999999999999999963

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=100.00  E-value=5.9e-48  Score=389.54  Aligned_cols=259  Identities=27%  Similarity=0.376  Sum_probs=212.9

Q ss_pred             ccccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHH
Q 009980            3 QETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDA   82 (521)
Q Consensus         3 ~~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (521)
                      +.++....+|++.+.||+|+||+||+|++..  ++ .||+|.+.....                                
T Consensus        33 ~~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~--~~-~~aikk~~~~~~--------------------------------   77 (394)
T 4e7w_A           33 KTGEQREIAYTNCKVIGNGSFGVVFQAKLVE--SD-EVAIKKVLQDKR--------------------------------   77 (394)
T ss_dssp             SSCCEEEEEEEEEEEEEEETTEEEEEEEETT--TE-EEEEEEEECCTT--------------------------------
T ss_pred             CCCCcccceEEEeEEEeeCCCeEEEEEEECC--CC-eEEEEEEecCcc--------------------------------
Confidence            4566678899999999999999999999986  44 488888754221                                


Q ss_pred             HHHHHHHHHHHHhhccCCCCCccceeEEEEeCC------eEEEEEeccCCCchHHHHH----hcCCCCHHHHHHHHHHHH
Q 009980           83 LLTNEILVMRKIVENVSPHPNVIDLYDVYEDQN------GVHLILELCSGGELFDRIV----AQERYMEVGAAAVIRQIA  152 (521)
Q Consensus        83 ~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~------~~~lv~e~~~gg~L~~~l~----~~~~~~~~~~~~i~~qil  152 (521)
                      ...+|+.+++.+     +||||+++++++...+      .+|+||||+.++ +.+.+.    ....+++..++.++.||+
T Consensus        78 ~~~~E~~il~~l-----~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~  151 (394)
T 4e7w_A           78 FKNRELQIMRIV-----KHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPET-VYRASRHYAKLKQTMPMLLIKLYMYQLL  151 (394)
T ss_dssp             SCCHHHHHHHTC-----CCTTBCCEEEEEEEESSSSSCEEEEEEEECCSEE-HHHHHHHHHHTTSCCCHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHhC-----CCCCcceEEEEEEecCCCCCceEEEEEeeccCcc-HHHHHHHHHhhcCCCCHHHHHHHHHHHH
Confidence            123689999988     9999999999996544      388999999875 433332    356799999999999999


Q ss_pred             HHHHHHHHCCCeeccCCCCcEEEeeCC-CCCCEEEeecCCCccCCCCCCcccccCCcccccccccccC-CCCchhhhHHH
Q 009980          153 EGLAALHQANIVHRDLKPENCLFLNDR-EDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQD-RITSKSDMWSL  230 (521)
Q Consensus       153 ~al~~lH~~~i~H~dlkp~Nil~~~~~-~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Diwsl  230 (521)
                      .||.|||++||+||||||+|||+   + .++.+||+|||+|+............||+.|+|||++.+. .|+.++||||+
T Consensus       152 ~aL~~LH~~~ivHrDlkp~Nill---~~~~~~~kL~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSl  228 (394)
T 4e7w_A          152 RSLAYIHSIGICHRDIKPQNLLL---DPPSGVLKLIDFGSAKILIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWST  228 (394)
T ss_dssp             HHHHHHHHTTEECSCCSGGGEEE---ETTTTEEEECCCTTCEECCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHH
T ss_pred             HHHHHHHHCCccCCCCCHHHEEE---cCCCCcEEEeeCCCcccccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHH
Confidence            99999999999999999999999   4 6788999999999876555556667899999999998764 58999999999


Q ss_pred             HHHHHHHHhCCCCCCCCCcHHHHHHHHcCCCCC-------------------------chhhhhccCHHHHHHHHHhccC
Q 009980          231 GVILYILLSGYPPFIAQSNRQKQQMIMAGEFSF-------------------------YEQTWKNISSSAKQLISSLLTV  285 (521)
Q Consensus       231 G~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~-------------------------~~~~~~~~s~~~~~li~~~l~~  285 (521)
                      ||++|+|++|++||.+.+..+....+......+                         .......+|+++++||.+||..
T Consensus       229 G~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  308 (394)
T 4e7w_A          229 GCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEY  308 (394)
T ss_dssp             HHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCS
T ss_pred             HHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCC
Confidence            999999999999999988777666655421111                         1112234889999999999999


Q ss_pred             CCCCCCCHHHHHcCCcccCC
Q 009980          286 DPNRRPSAQELLNHPWVIGD  305 (521)
Q Consensus       286 dp~~R~t~~~~l~h~~~~~~  305 (521)
                      ||.+|||+.++++||||...
T Consensus       309 dP~~R~t~~e~l~hp~f~~~  328 (394)
T 4e7w_A          309 TPSARLTAIEALCHPFFDEL  328 (394)
T ss_dssp             SGGGSCCHHHHHTSGGGSTT
T ss_pred             ChhhCCCHHHHhcChhhhhh
Confidence            99999999999999999854

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=100.00  E-value=3.8e-48  Score=386.88  Aligned_cols=263  Identities=22%  Similarity=0.330  Sum_probs=220.0

Q ss_pred             cccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHH
Q 009980            4 ETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDAL   83 (521)
Q Consensus         4 ~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (521)
                      .++...++|++.+.||+|+||.||+|+++.  +++.||+|++.....                           ......
T Consensus        27 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~--~~~~va~K~~~~~~~---------------------------~~~~~~   77 (360)
T 3eqc_A           27 VGELKDDDFEKISELGAGNGGVVFKVSHKP--SGLVMARKLIHLEIK---------------------------PAIRNQ   77 (360)
T ss_dssp             CCCCCGGGEEEEEEEEECSSCEEEEEEETT--TCCEEEEEEEECCCC---------------------------HHHHHH
T ss_pred             ccccccccceeeeeecCCCCeEEEEEEECC--CCcEEEEEEeccccC---------------------------HHHHHH
Confidence            345677899999999999999999999987  788999999875311                           122355


Q ss_pred             HHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-C
Q 009980           84 LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQA-N  162 (521)
Q Consensus        84 ~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~-~  162 (521)
                      +.+|+.+++++     +||||+++++++.+++.+|+||||++|++|.+++...+.+++..+..++.|++.||.|||++ |
T Consensus        78 ~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~  152 (360)
T 3eqc_A           78 IIRELQVLHEC-----NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK  152 (360)
T ss_dssp             HHHHHGGGGGC-----CCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHC-----CCCCEEEEeEEEEECCEEEEEEECCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence            78899988887     99999999999999999999999999999999999888999999999999999999999996 9


Q ss_pred             CeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCC
Q 009980          163 IVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYP  242 (521)
Q Consensus       163 i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~  242 (521)
                      |+||||||+||++   +.++.+||+|||++...... ......||+.|+|||++.+..++.++|||||||++|+|++|..
T Consensus       153 i~H~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~  228 (360)
T 3eqc_A          153 IMHRDVKPSNILV---NSRGEIKLCDFGVSGQLIDS-MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRY  228 (360)
T ss_dssp             CCCSCCSGGGEEE---CTTCCEEECCCCCCHHHHHH-C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSC
T ss_pred             EEcCCccHHHEEE---CCCCCEEEEECCCCcccccc-cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCC
Confidence            9999999999999   77889999999999654221 2234579999999999999999999999999999999999999


Q ss_pred             CCCCCCcHHHHHHH------------------------------------------HcCCCCCchhhhhccCHHHHHHHH
Q 009980          243 PFIAQSNRQKQQMI------------------------------------------MAGEFSFYEQTWKNISSSAKQLIS  280 (521)
Q Consensus       243 pf~~~~~~~~~~~i------------------------------------------~~~~~~~~~~~~~~~s~~~~~li~  280 (521)
                      ||...+..+....+                                          ......  ......+|.++++||.
T Consensus       229 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~  306 (360)
T 3eqc_A          229 PIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPP--KLPSGVFSLEFQDFVN  306 (360)
T ss_dssp             CSSCCCHHHHHHHHC------------------------------CCCHHHHHHHHHHSCCC--CCCTTTSCHHHHHHHH
T ss_pred             CCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhccCCC--CCCcccccHHHHHHHH
Confidence            99876655432221                                          111111  1112347899999999


Q ss_pred             HhccCCCCCCCCHHHHHcCCcccCCC
Q 009980          281 SLLTVDPNRRPSAQELLNHPWVIGDS  306 (521)
Q Consensus       281 ~~l~~dp~~R~t~~~~l~h~~~~~~~  306 (521)
                      +||..||.+|||+.++|+||||+...
T Consensus       307 ~~L~~dP~~Rpt~~ell~hp~~~~~~  332 (360)
T 3eqc_A          307 KCLIKNPAERADLKQLMVHAFIKRSD  332 (360)
T ss_dssp             HHHCSSTTTSCCHHHHHTSHHHHHHH
T ss_pred             HHhhcChhhCCCHHHHhhChHhhcch
Confidence            99999999999999999999997543

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=100.00  E-value=3.9e-48  Score=382.70  Aligned_cols=262  Identities=34%  Similarity=0.610  Sum_probs=193.2

Q ss_pred             ccccccceeecc-cccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHH
Q 009980            5 TRKLTDEYEVTD-ILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDAL   83 (521)
Q Consensus         5 ~~~~~~~Y~~~~-~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (521)
                      ...+.++|++.+ .||+|+||.||+|+++.  +++.||||++...                                 ..
T Consensus        23 ~~~~~~~y~i~~~~lG~G~~g~V~~~~~~~--~~~~vavK~~~~~---------------------------------~~   67 (336)
T 3fhr_A           23 KYAVTDDYQLSKQVLGLGVNGKVLECFHRR--TGQKCALKLLYDS---------------------------------PK   67 (336)
T ss_dssp             CSCGGGTEEEEEEEEEEETTEEEEEEEETT--TCCEEEEEEEESS---------------------------------HH
T ss_pred             CccccceeEecceeeeeCCCeEEEEEEECC--CCCEEEEEEecCc---------------------------------HH
Confidence            345789999965 69999999999999998  7899999998531                                 11


Q ss_pred             HHHHHHHHHHHhhccCCCCCccceeEEEEe----CCeEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHH
Q 009980           84 LTNEILVMRKIVENVSPHPNVIDLYDVYED----QNGVHLILELCSGGELFDRIVAQE--RYMEVGAAAVIRQIAEGLAA  157 (521)
Q Consensus        84 ~~~E~~~l~~l~~~~~~hpniv~~~~~~~~----~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~al~~  157 (521)
                      ..+|+..+.+.    ..||||+++++++..    ...+|+|||||.||+|.+++...+  .+++..++.++.||+.||.|
T Consensus        68 ~~~e~~~~~~~----~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~  143 (336)
T 3fhr_A           68 ARQEVDHHWQA----SGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQF  143 (336)
T ss_dssp             HHHHHHHHHHH----TTSTTBCCEEEEEEEEETTEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHh----cCCCChHHHHHHHhhccCCCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHH
Confidence            33444443333    389999999999976    456899999999999999998764  69999999999999999999


Q ss_pred             HHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHH
Q 009980          158 LHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYIL  237 (521)
Q Consensus       158 lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l  237 (521)
                      ||++||+||||||+||++..++..+.+||+|||++..... .......||+.|+|||++.+..++.++|||||||++|+|
T Consensus       144 LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l  222 (336)
T 3fhr_A          144 LHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQ-NALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYIL  222 (336)
T ss_dssp             HHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC-----------------------CHHHHHHHHHHHHHHHHHH
T ss_pred             HHhCCeecCCCCHHHEEEEecCCCceEEEeccccceeccc-cccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHH
Confidence            9999999999999999996555567799999999976543 233455789999999999888899999999999999999


Q ss_pred             HhCCCCCCCCCcHHH----HHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCC
Q 009980          238 LSGYPPFIAQSNRQK----QQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDS  306 (521)
Q Consensus       238 l~g~~pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~  306 (521)
                      ++|..||.+......    ...+..+...++.+.|..+|+++++||.+||..||.+|||+.++|+||||.+..
T Consensus       223 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  295 (336)
T 3fhr_A          223 LCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSM  295 (336)
T ss_dssp             HHSSCCC---------------------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTGG
T ss_pred             HHCCCCCCCccchhhhhhHHHhhhccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccccc
Confidence            999999977665443    334445555666667788999999999999999999999999999999998643

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=100.00  E-value=1.2e-47  Score=380.52  Aligned_cols=260  Identities=27%  Similarity=0.412  Sum_probs=221.2

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      ...+.|++.+.||+|+||.||+|++..  +++.||||++.......                         ......+.+
T Consensus        51 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~--~~~~vaiK~~~~~~~~~-------------------------~~~~~~~~~  103 (348)
T 1u5q_A           51 DPEKLFSDLREIGHGSFGAVYFARDVR--NSEVVAIKKMSYSGKQS-------------------------NEKWQDIIK  103 (348)
T ss_dssp             CHHHHEEEEEEEEECSSEEEEEEEETT--TTEEEEEEEEESCSSCH-------------------------HHHHHHHHH
T ss_pred             chhhheeeeeEEccCCCEEEEEEEEcc--CCeEEEEEEEccccccc-------------------------hHHHHHHHH
Confidence            345679999999999999999999987  78899999997532211                         112345789


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIV-AQERYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~-~~~~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      |+.+++++     +||||+++++++.+++..|+||||+.| +|.+.+. ....+++..+..++.|++.||.|||++||+|
T Consensus       104 E~~~l~~l-----~hpniv~~~~~~~~~~~~~lv~e~~~g-~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH  177 (348)
T 1u5q_A          104 EVRFLQKL-----RHPNTIQYRGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIH  177 (348)
T ss_dssp             HHHHHHHC-----CCTTBCCEEEEEEETTEEEEEEECCSE-EHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBC
T ss_pred             HHHHHHhC-----CCCCEeeEEEEEEECCeEEEEEecCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeee
Confidence            99999998     999999999999999999999999974 7877775 4567999999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccc---cCCCCchhhhHHHHHHHHHHHhCCC
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALL---QDRITSKSDMWSLGVILYILLSGYP  242 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~~ll~g~~  242 (521)
                      |||||+|||+   +.++.+||+|||++.....   ....+||+.|+|||++.   ...++.++|||||||++|+|++|.+
T Consensus       178 ~Dlkp~NIll---~~~~~~kL~DfG~a~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~  251 (348)
T 1u5q_A          178 RDVKAGNILL---SEPGLVKLGDFGSASIMAP---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKP  251 (348)
T ss_dssp             CCCSGGGEEE---ETTTEEEECCCTTCBSSSS---BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSC
T ss_pred             CCCCHHHEEE---CCCCCEEEeeccCceecCC---CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence            9999999999   6778899999999986543   23457999999999984   5678999999999999999999999


Q ss_pred             CCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCCC
Q 009980          243 PFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSA  307 (521)
Q Consensus       243 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~~  307 (521)
                      ||.+.+.......+..+..+...  ...+|+.+++||.+||..||.+|||+.++++|||+.....
T Consensus       252 p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~~~~  314 (348)
T 1u5q_A          252 PLFNMNAMSALYHIAQNESPALQ--SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERP  314 (348)
T ss_dssp             TTTTSCHHHHHHHHHHSCCCCCC--CTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSCCC
T ss_pred             CCCCCChHHHHHHHHhcCCCCCC--CCCCCHHHHHHHHHHcccChhhCcCHHHHhhChhhhccCC
Confidence            99988877776666665443221  2457999999999999999999999999999999986544

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=100.00  E-value=3.2e-47  Score=375.53  Aligned_cols=256  Identities=24%  Similarity=0.387  Sum_probs=212.0

Q ss_pred             cccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      ..++|++.+.||+|+||.||+|+++.  +++.||||++...                               ....+.+|
T Consensus        34 ~~~~y~~~~~lg~G~~g~V~~~~~~~--~~~~vavK~~~~~-------------------------------~~~~~~~E   80 (330)
T 3nsz_A           34 NQDDYQLVRKLGRGKYSEVFEAINIT--NNEKVVVKILKPV-------------------------------KKKKIKRE   80 (330)
T ss_dssp             EGGGEEEEEEEEECSSEEEEEEEETT--TCCEEEEEEECSC-------------------------------CHHHHHHH
T ss_pred             CCCceEEEEEecccCCeEEEEEEECC--CCcEEEEEEeccc-------------------------------chHHHHHH
Confidence            35789999999999999999999988  7889999998531                               23458899


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEe--CCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYED--QNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~--~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      +.+++++    ..||||+++++++.+  ....++||||+.|++|.+++.   .+++..+..++.||+.||.|||++||+|
T Consensus        81 ~~~l~~l----~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~ivH  153 (330)
T 3nsz_A           81 IKILENL----RGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMH  153 (330)
T ss_dssp             HHHHHHH----TTSTTBCCEEEEEECTTTCCEEEEEECCCCCCHHHHGG---GCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             HHHHHHc----CCCCCEEEeeeeeccCCCCceEEEEeccCchhHHHHHH---hCCHHHHHHHHHHHHHHHHHHHhCCeee
Confidence            9999998    249999999999998  678999999999999988774   4899999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCCCC-CEEEeecCCCccCCCCCCcccccCCccccccccccc-CCCCchhhhHHHHHHHHHHHhCCCC
Q 009980          166 RDLKPENCLFLNDREDS-PLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQ-DRITSKSDMWSLGVILYILLSGYPP  243 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~-~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~ll~g~~p  243 (521)
                      |||||+|||+   +.++ .+||+|||+|+............||+.|+|||++.+ ..++.++|||||||++|+|++|..|
T Consensus       154 ~Dikp~Nil~---~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p  230 (330)
T 3nsz_A          154 RDVKPHNVMI---DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP  230 (330)
T ss_dssp             CCCSGGGEEE---ETTTTEEEECCCTTCEECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSS
T ss_pred             CCCCHHHEEE---cCCCCEEEEEeCCCceEcCCCCccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCC
Confidence            9999999999   4344 799999999987665555566689999999999876 6789999999999999999999999


Q ss_pred             CCCCCcH-HHHHH-------------HHcCCCCCc--------------------hhhhhccCHHHHHHHHHhccCCCCC
Q 009980          244 FIAQSNR-QKQQM-------------IMAGEFSFY--------------------EQTWKNISSSAKQLISSLLTVDPNR  289 (521)
Q Consensus       244 f~~~~~~-~~~~~-------------i~~~~~~~~--------------------~~~~~~~s~~~~~li~~~l~~dp~~  289 (521)
                      |...... +....             +........                    ......+|+++++||.+||..||.+
T Consensus       231 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  310 (330)
T 3nsz_A          231 FFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQS  310 (330)
T ss_dssp             SSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGG
T ss_pred             cccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCccc
Confidence            9554322 22211             111111111                    1112337999999999999999999


Q ss_pred             CCCHHHHHcCCcccCCC
Q 009980          290 RPSAQELLNHPWVIGDS  306 (521)
Q Consensus       290 R~t~~~~l~h~~~~~~~  306 (521)
                      |||++++|+||||++..
T Consensus       311 Rpta~e~l~hp~f~~~~  327 (330)
T 3nsz_A          311 RLTAREAMEHPYFYTVV  327 (330)
T ss_dssp             SCCHHHHHTSGGGTTCC
T ss_pred             CCCHHHHhcCccHhhhc
Confidence            99999999999998643

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=100.00  E-value=2.9e-47  Score=380.97  Aligned_cols=262  Identities=26%  Similarity=0.404  Sum_probs=218.7

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      -.+.++|++.+.||+|+||.||+|++..  +++.||||++.....                           ......+.
T Consensus        23 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~--~~~~vaiK~~~~~~~---------------------------~~~~~~~~   73 (364)
T 3qyz_A           23 FDVGPRYTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEH---------------------------QTYCQRTL   73 (364)
T ss_dssp             CCCTTTEEEEEEEEECSSEEEEEEEETT--TTEEEEEEEECCTTC---------------------------HHHHHHHH
T ss_pred             ccccccEEEEEEeecCCCeEEEEEEECC--CCeEEEEEEeccccC---------------------------cHHHHHHH
Confidence            3456899999999999999999999988  788999999863211                           12235578


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeC-----CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQ-----NGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ  160 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~-----~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~  160 (521)
                      +|+.+++++     +||||+++++++...     ...|+||||+.| +|.+++.. +.+++..++.++.||+.||.|||+
T Consensus        74 ~E~~~l~~l-----~h~niv~~~~~~~~~~~~~~~~~~iv~e~~~~-~L~~~l~~-~~~~~~~~~~i~~qi~~aL~~LH~  146 (364)
T 3qyz_A           74 REIKILLRF-----RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKT-QHLSNDHICYFLYQILRGLKYIHS  146 (364)
T ss_dssp             HHHHHHHHC-----CCTTBCCCCEEECCSSTTTCCCEEEEEECCSE-EHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhc-----CCCCCccceeEEecCCccccceEEEEEcccCc-CHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHH
Confidence            999999998     999999999999765     479999999975 89988866 569999999999999999999999


Q ss_pred             CCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC----cccccCCccccccccccc-CCCCchhhhHHHHHHHH
Q 009980          161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP----VVGLFGSIDYVSPEALLQ-DRITSKSDMWSLGVILY  235 (521)
Q Consensus       161 ~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~  235 (521)
                      +||+||||||+||++   +.++.+||+|||++........    ....+||+.|+|||++.+ ..++.++|||||||++|
T Consensus       147 ~~ivH~Dikp~NIl~---~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~  223 (364)
T 3qyz_A          147 ANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILA  223 (364)
T ss_dssp             TTEECCCCCGGGEEE---CTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHH
T ss_pred             CCeecCCCChHhEEE---CCCCCEEEEeCcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHH
Confidence            999999999999999   7788999999999986543221    234579999999998754 45899999999999999


Q ss_pred             HHHhCCCCCCCCCcHHHHHHHHcCCCCCc---------------------------hhhhhccCHHHHHHHHHhccCCCC
Q 009980          236 ILLSGYPPFIAQSNRQKQQMIMAGEFSFY---------------------------EQTWKNISSSAKQLISSLLTVDPN  288 (521)
Q Consensus       236 ~ll~g~~pf~~~~~~~~~~~i~~~~~~~~---------------------------~~~~~~~s~~~~~li~~~l~~dp~  288 (521)
                      +|++|.+||.+.+..+....+......+.                           ...++.+++++.+||.+||..||.
T Consensus       224 ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  303 (364)
T 3qyz_A          224 EMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPH  303 (364)
T ss_dssp             HHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTT
T ss_pred             HHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChh
Confidence            99999999998887777666543211111                           122356799999999999999999


Q ss_pred             CCCCHHHHHcCCcccCCC
Q 009980          289 RRPSAQELLNHPWVIGDS  306 (521)
Q Consensus       289 ~R~t~~~~l~h~~~~~~~  306 (521)
                      +|||+.++|+||||....
T Consensus       304 ~R~t~~e~l~hp~~~~~~  321 (364)
T 3qyz_A          304 KRIEVEQALAHPYLEQYY  321 (364)
T ss_dssp             TSCCHHHHHTSGGGTTTC
T ss_pred             hCCCHHHHhcCcchhhcc
Confidence            999999999999998653

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=100.00  E-value=1e-47  Score=377.18  Aligned_cols=262  Identities=24%  Similarity=0.424  Sum_probs=216.7

Q ss_pred             ccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHH
Q 009980            5 TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALL   84 (521)
Q Consensus         5 ~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (521)
                      ...+.++|++.+.||+|+||.||+|+++.  +++.||||++......                           .....+
T Consensus         4 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~--~~~~vavK~~~~~~~~---------------------------~~~~~~   54 (319)
T 4euu_A            4 QSTSNHLWLLSDILGQGATANVFRGRHKK--TGDLFAIKVFNNISFL---------------------------RPVDVQ   54 (319)
T ss_dssp             EECSSEEEEEEEEEEECSSEEEEEEEETT--TCCEEEEEEECGGGGG---------------------------SCHHHH
T ss_pred             ccCCCCCEEEEEEecCCCCeEEEEEEECC--CCcEEEEEEecccccc---------------------------chHHHH
Confidence            34678999999999999999999999988  7889999998653221                           123457


Q ss_pred             HHHHHHHHHHhhccCCCCCccceeEEEEeCC--eEEEEEeccCCCchHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHH
Q 009980           85 TNEILVMRKIVENVSPHPNVIDLYDVYEDQN--GVHLILELCSGGELFDRIVAQER---YMEVGAAAVIRQIAEGLAALH  159 (521)
Q Consensus        85 ~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~--~~~lv~e~~~gg~L~~~l~~~~~---~~~~~~~~i~~qil~al~~lH  159 (521)
                      .+|+.+++++     +||||+++++++....  ..|+||||+.|++|.+++.....   +++..+..++.||+.||.|||
T Consensus        55 ~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH  129 (319)
T 4euu_A           55 MREFEVLKKL-----NHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR  129 (319)
T ss_dssp             HHHHHHHHHC-----CCTTBCCEEEEEECTTTCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhc-----CCCCcceEEEEeecCCCceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH
Confidence            7899999998     9999999999998765  78999999999999999986543   999999999999999999999


Q ss_pred             HCCCeeccCCCCcEEEee-CCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccc--------cCCCCchhhhHHH
Q 009980          160 QANIVHRDLKPENCLFLN-DREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALL--------QDRITSKSDMWSL  230 (521)
Q Consensus       160 ~~~i~H~dlkp~Nil~~~-~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~Diwsl  230 (521)
                      ++||+||||||+|||+.. ++..+.+||+|||+|+............||+.|+|||++.        +..++.++|||||
T Consensus       130 ~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Diwsl  209 (319)
T 4euu_A          130 ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSI  209 (319)
T ss_dssp             HTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHH
T ss_pred             HCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHH
Confidence            999999999999999743 3455679999999998766555556678999999999986        4678999999999


Q ss_pred             HHHHHHHHhCCCCCCCCC----cHHHHHHHHcCCCC---------------------CchhhhhccCHHHHHHHHHhccC
Q 009980          231 GVILYILLSGYPPFIAQS----NRQKQQMIMAGEFS---------------------FYEQTWKNISSSAKQLISSLLTV  285 (521)
Q Consensus       231 G~il~~ll~g~~pf~~~~----~~~~~~~i~~~~~~---------------------~~~~~~~~~s~~~~~li~~~l~~  285 (521)
                      ||++|+|++|..||....    ..+....+..+...                     ........++..+.+||.+||+.
T Consensus       210 G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  289 (319)
T 4euu_A          210 GVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEA  289 (319)
T ss_dssp             HHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCC
T ss_pred             HHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccC
Confidence            999999999999997533    23444445443321                     11112234667899999999999


Q ss_pred             CCCCCCCHHHHHcCC
Q 009980          286 DPNRRPSAQELLNHP  300 (521)
Q Consensus       286 dp~~R~t~~~~l~h~  300 (521)
                      ||.+|||++|+|+||
T Consensus       290 dP~~R~s~~ell~h~  304 (319)
T 4euu_A          290 DQEKCWGFDQFFAET  304 (319)
T ss_dssp             CTTTSCCHHHHHHHH
T ss_pred             ChhhhccHHHhhhcc
Confidence            999999999999987

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=100.00  E-value=6.4e-47  Score=372.68  Aligned_cols=269  Identities=26%  Similarity=0.382  Sum_probs=222.1

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      ....++|++.+.||+|+||.||+|++... +++.||||++........                          ....+.
T Consensus         7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~~vavK~~~~~~~~~~--------------------------~~~~~~   59 (326)
T 1blx_A            7 CRADQQYECVAEIGEGAYGKVFKARDLKN-GGRFVALKRVRVQTGEEG--------------------------MPLSTI   59 (326)
T ss_dssp             CCGGGTEEEEEEEEEETTEEEEEEEETTT-TTEEEEEEEEEEEBCTTS--------------------------CBCTHH
T ss_pred             cCchhceeeeeeecccccEEEEEEEecCC-CCEEEEEEEeccCccccc--------------------------CCchhh
Confidence            45668999999999999999999999531 678999999975432210                          112356


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEE-----eCCeEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHH
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYE-----DQNGVHLILELCSGGELFDRIVAQE--RYMEVGAAAVIRQIAEGLAAL  158 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~-----~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~al~~l  158 (521)
                      +|+.+++.+..  ..||||+++++++.     .....++||||+. |+|.+++....  .+++..+..++.||+.||.||
T Consensus        60 ~e~~~l~~l~~--~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~l  136 (326)
T 1blx_A           60 REVAVLRHLET--FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFL  136 (326)
T ss_dssp             HHHHHHHHHHH--TCCTTBCCEEEEEEEEECSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhhhc--cCCCCeEeeeeeeeecccCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHH
Confidence            78877776622  27999999999987     5568999999998 59999998754  499999999999999999999


Q ss_pred             HHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHH
Q 009980          159 HQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILL  238 (521)
Q Consensus       159 H~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll  238 (521)
                      |++||+||||||+||++   +.++.+||+|||++.............||+.|+|||++.+..++.++|||||||++|+|+
T Consensus       137 H~~gi~H~dlkp~Nili---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~  213 (326)
T 1blx_A          137 HSHRVVHRDLKPQNILV---TSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF  213 (326)
T ss_dssp             HHTTCCCCCCCGGGEEE---CTTCCEEECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHH
T ss_pred             HHCCceeccCCHHHeEE---cCCCCEEEecCcccccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHH
Confidence            99999999999999999   778899999999998765444445567999999999999889999999999999999999


Q ss_pred             hCCCCCCCCCcHHHHHHHHcCCCC-----------------------CchhhhhccCHHHHHHHHHhccCCCCCCCCHHH
Q 009980          239 SGYPPFIAQSNRQKQQMIMAGEFS-----------------------FYEQTWKNISSSAKQLISSLLTVDPNRRPSAQE  295 (521)
Q Consensus       239 ~g~~pf~~~~~~~~~~~i~~~~~~-----------------------~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~  295 (521)
                      +|.+||.+.+.......+......                       .....+..+++.+++||.+||..||.+|||+.+
T Consensus       214 ~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e  293 (326)
T 1blx_A          214 RRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYS  293 (326)
T ss_dssp             HSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             cCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHH
Confidence            999999988877776666532111                       111223568999999999999999999999999


Q ss_pred             HHcCCcccCCCC
Q 009980          296 LLNHPWVIGDSA  307 (521)
Q Consensus       296 ~l~h~~~~~~~~  307 (521)
                      +++||||.....
T Consensus       294 ~l~hp~~~~~~~  305 (326)
T 1blx_A          294 ALSHPYFQDLER  305 (326)
T ss_dssp             HHTSGGGTTCCC
T ss_pred             HhcCccccccch
Confidence            999999986544

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=100.00  E-value=9.5e-48  Score=372.12  Aligned_cols=260  Identities=24%  Similarity=0.314  Sum_probs=198.0

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      +...++|++.+.||+|+||.||+|+++.  +++.||||++......                          ......+.
T Consensus         3 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~--~~~~vavK~~~~~~~~--------------------------~~~~~~~~   54 (290)
T 3fme_A            3 EVKADDLEPIMELGRGAYGVVEKMRHVP--SGQIMAVKRIRATVNS--------------------------QEQKRLLM   54 (290)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEETT--TTEEEEEEEEC---CH--------------------------HHHHHHHH
T ss_pred             cccHHhhhhHHhcCCCCCeEEEEEEecC--CCeEEEEEEeecccCc--------------------------HHHHHHHH
Confidence            4567899999999999999999999988  7899999998642110                          01112222


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIV----AQERYMEVGAAAVIRQIAEGLAALHQA  161 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~----~~~~~~~~~~~~i~~qil~al~~lH~~  161 (521)
                      .+...++.+     +||||+++++++.+++..|+||||+.| +|.+++.    ....+++..++.++.||+.||.|||++
T Consensus        55 ~~~~~~~~~-----~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  128 (290)
T 3fme_A           55 DLDISMRTV-----DCPFTVTFYGALFREGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK  128 (290)
T ss_dssp             HHHHHHTTC-----CCTTBCCEEEEEECSSSEEEEEECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhC-----CCCeEEEEeeeeeccCCEEEEEehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc
Confidence            333334444     999999999999999999999999975 8777664    356899999999999999999999998


Q ss_pred             -CCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCccccccccc----ccCCCCchhhhHHHHHHHHH
Q 009980          162 -NIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEAL----LQDRITSKSDMWSLGVILYI  236 (521)
Q Consensus       162 -~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DiwslG~il~~  236 (521)
                       ||+||||||+||++   +.++.+||+|||++.............||+.|+|||++    .+..++.++||||+|+++|+
T Consensus       129 ~~i~H~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~  205 (290)
T 3fme_A          129 LSVIHRDVKPSNVLI---NALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIE  205 (290)
T ss_dssp             SCCCCCCCSGGGCEE---CTTCCEEBCCC---------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHH
T ss_pred             CCeecCCCCHHHEEE---CCCCCEEEeecCCcccccccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHH
Confidence             99999999999999   77789999999999876554444555799999999996    55678999999999999999


Q ss_pred             HHhCCCCCCCCC-cHHHHHHHHcC-CCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCC
Q 009980          237 LLSGYPPFIAQS-NRQKQQMIMAG-EFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGD  305 (521)
Q Consensus       237 ll~g~~pf~~~~-~~~~~~~i~~~-~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~  305 (521)
                      |++|..||.... ........... ....+   ...+|+++.++|.+||..||.+|||+.++++||||+..
T Consensus       206 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~~  273 (290)
T 3fme_A          206 LAILRFPYDSWGTPFQQLKQVVEEPSPQLP---ADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLH  273 (290)
T ss_dssp             HHHTSCSSCCCSCHHHHHHHHHHSCCCCCC---TTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred             HHHCCCCccccCchHHHHHHHhccCCCCcc---cccCCHHHHHHHHHHhhcChhhCcCHHHHHhCcccccC
Confidence            999999997633 33333333333 22222   24689999999999999999999999999999999743

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=100.00  E-value=3.7e-47  Score=376.24  Aligned_cols=270  Identities=24%  Similarity=0.377  Sum_probs=220.9

Q ss_pred             CccccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccH
Q 009980            2 GQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSD   81 (521)
Q Consensus         2 ~~~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (521)
                      .+.+..+.++|++.+.||+|+||.||+|.+... +++.||||++....                             ...
T Consensus         6 ~~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~~vavK~~~~~~-----------------------------~~~   55 (339)
T 1z57_A            6 CQSGDVLSARYEIVDTLGEGAFGKVVECIDHKA-GGRHVAVKIVKNVD-----------------------------RYC   55 (339)
T ss_dssp             CSTTCEETTTEEEEEEEEEETTEEEEEEEETTT-TTEEEEEEEECSSH-----------------------------HHH
T ss_pred             eecCCCccCceEEEEEEecCCCeEEEEEEecCC-CCcEEEEEEEecCC-----------------------------chh
Confidence            367788999999999999999999999998431 67899999985311                             123


Q ss_pred             HHHHHHHHHHHHHhhc-cCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHH
Q 009980           82 ALLTNEILVMRKIVEN-VSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE--RYMEVGAAAVIRQIAEGLAAL  158 (521)
Q Consensus        82 ~~~~~E~~~l~~l~~~-~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~al~~l  158 (521)
                      ..+.+|+.+++.+... ...|++|+++++++...+.+|+||||+ +++|.+++...+  .+++..+..++.||+.||.||
T Consensus        56 ~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~l  134 (339)
T 1z57_A           56 EAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFL  134 (339)
T ss_dssp             HHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHH
Confidence            4578899999988332 235567999999999999999999999 889999998765  689999999999999999999


Q ss_pred             HHCCCeeccCCCCcEEEeeCCC----------------CCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCC
Q 009980          159 HQANIVHRDLKPENCLFLNDRE----------------DSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRIT  222 (521)
Q Consensus       159 H~~~i~H~dlkp~Nil~~~~~~----------------~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  222 (521)
                      |++||+||||||+|||+...+.                ++.+||+|||+++....  ......||+.|+|||++.+..++
T Consensus       135 H~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~  212 (339)
T 1z57_A          135 HSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDE--HHSTLVSTRHYRAPEVILALGWS  212 (339)
T ss_dssp             HHTTEECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTS--CCCSSCSCGGGCCHHHHTTSCCC
T ss_pred             HHCCCcCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCcccccCcc--ccccccCCccccChHHhhCCCCC
Confidence            9999999999999999943211                56799999999986443  23455799999999999998999


Q ss_pred             chhhhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHcCCCCCchhh-----------------------------------
Q 009980          223 SKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQT-----------------------------------  267 (521)
Q Consensus       223 ~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~-----------------------------------  267 (521)
                      .++|||||||++|+|++|.+||...+..+....+.......+...                                   
T Consensus       213 ~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (339)
T 1z57_A          213 QPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLK  292 (339)
T ss_dssp             THHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGG
T ss_pred             cchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchh
Confidence            999999999999999999999998877665554433222222111                                   


Q ss_pred             -----hhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccC
Q 009980          268 -----WKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIG  304 (521)
Q Consensus       268 -----~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~  304 (521)
                           ....++.+.+||.+||..||.+|||+.++++||||+.
T Consensus       293 ~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~  334 (339)
T 1z57_A          293 EFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDL  334 (339)
T ss_dssp             GGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGG
T ss_pred             hhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcCHHHHH
Confidence                 0123577899999999999999999999999999974

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=6.9e-48  Score=383.78  Aligned_cols=262  Identities=28%  Similarity=0.466  Sum_probs=216.0

Q ss_pred             ccceeecccccccCceEEEEeEEcc-CCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKT-CGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~-~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      .++|++.+.||+|+||.||+|++.. ..+++.||||++++.....                        .......+.+|
T Consensus        53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~------------------------~~~~~~~~~~E  108 (355)
T 1vzo_A           53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQ------------------------KAKTTEHTRTE  108 (355)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEE------------------------EESSGGGCCCH
T ss_pred             ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhh------------------------hhhHHHHHHHH
Confidence            4799999999999999999999852 1278899999986532110                        00112335678


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecc
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRD  167 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~d  167 (521)
                      +.+++++    ..||||+++++++...+.+|+||||+.||+|.+++.....+++..+..++.||+.||.|||++||+|||
T Consensus       109 ~~~l~~l----~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~D  184 (355)
T 1vzo_A          109 RQVLEHI----RQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRD  184 (355)
T ss_dssp             HHHHHHH----HTCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred             HHHHHHc----cCCCceeEEEEEEeeCceEEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence            8888887    269999999999999999999999999999999999888999999999999999999999999999999


Q ss_pred             CCCCcEEEeeCCCCCCEEEeecCCCccCCCCC--CcccccCCccccccccccc--CCCCchhhhHHHHHHHHHHHhCCCC
Q 009980          168 LKPENCLFLNDREDSPLKIMDFGLSSVEGYTD--PVVGLFGSIDYVSPEALLQ--DRITSKSDMWSLGVILYILLSGYPP  243 (521)
Q Consensus       168 lkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~~ll~g~~p  243 (521)
                      |||+|||+   +.++.+||+|||+++......  .....+||+.|+|||++.+  ..++.++|||||||++|+|++|..|
T Consensus       185 lkp~NIll---~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~p  261 (355)
T 1vzo_A          185 IKLENILL---DSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASP  261 (355)
T ss_dssp             CCGGGEEE---CTTSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCT
T ss_pred             CCHHHEEE---CCCCcEEEeeCCCCeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCC
Confidence            99999999   778899999999997543222  2234579999999999985  3478999999999999999999999


Q ss_pred             CCCCC----cHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCC-----CHHHHHcCCcccCC
Q 009980          244 FIAQS----NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRP-----SAQELLNHPWVIGD  305 (521)
Q Consensus       244 f~~~~----~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~-----t~~~~l~h~~~~~~  305 (521)
                      |....    ...+...+......++    ..+++.+++||.+||..||.+||     |+.++++||||...
T Consensus       262 f~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~~  328 (355)
T 1vzo_A          262 FTVDGEKNSQAEISRRILKSEPPYP----QEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKI  328 (355)
T ss_dssp             TSCTTSCCCHHHHHHHHHHCCCCCC----TTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTC
T ss_pred             CccCCccchHHHHHHHHhccCCCCC----cccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhcC
Confidence            97543    2344445555444433    56899999999999999999999     99999999999754

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.8e-46  Score=369.44  Aligned_cols=263  Identities=26%  Similarity=0.465  Sum_probs=216.9

Q ss_pred             cccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHH
Q 009980            4 ETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDAL   83 (521)
Q Consensus         4 ~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (521)
                      +.....++|++.+.||+|+||.||+|++..  +++.||||++.....                             ....
T Consensus        18 ~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~--~~~~vaiK~~~~~~~-----------------------------~~~~   66 (326)
T 2x7f_A           18 ALRDPAGIFELVELVGNGTYGQVYKGRHVK--TGQLAAIKVMDVTGD-----------------------------EEEE   66 (326)
T ss_dssp             CCCCCTTTEEEEEEEEEETTEEEEEEEETT--TCCEEEEEEEECCSS-----------------------------TTHH
T ss_pred             hccCCCCcEEEEEEeccCCCEEEEEEEECC--CCCeEEEEEEecCcc-----------------------------cHHH
Confidence            345678899999999999999999999987  788999999864321                             1345


Q ss_pred             HHHHHHHHHHHhhccCCCCCccceeEEEEe------CCeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHH
Q 009980           84 LTNEILVMRKIVENVSPHPNVIDLYDVYED------QNGVHLILELCSGGELFDRIVAQ--ERYMEVGAAAVIRQIAEGL  155 (521)
Q Consensus        84 ~~~E~~~l~~l~~~~~~hpniv~~~~~~~~------~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~al  155 (521)
                      +.+|+.+++++    .+||||+++++++..      .+.+|+||||+.|++|.+++...  ..+++..++.++.||+.||
T Consensus        67 ~~~e~~~l~~l----~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l  142 (326)
T 2x7f_A           67 IKQEINMLKKY----SHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGL  142 (326)
T ss_dssp             HHHHHHHHHHH----CCSTTBCCEEEEEEECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhc----cCCCCeeeeeeEEeeccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHH
Confidence            78899999987    479999999999987      56899999999999999999864  5799999999999999999


Q ss_pred             HHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC-CcccccCCcccccccccc-----cCCCCchhhhHH
Q 009980          156 AALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALL-----QDRITSKSDMWS  229 (521)
Q Consensus       156 ~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~-----~~~~~~~~Diws  229 (521)
                      .|||++||+||||||+||++   +.++.+||+|||++....... ......||+.|+|||++.     +..++.++||||
T Consensus       143 ~~lH~~~ivH~dlkp~NIl~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~s  219 (326)
T 2x7f_A          143 SHLHQHKVIHRDIKGQNVLL---TENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWS  219 (326)
T ss_dssp             HHHHHTTCCCCCCSGGGEEE---CTTCCEEECCCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHH
T ss_pred             HHHHHCCccccCCcHHHEEE---cCCCCEEEeeCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHH
Confidence            99999999999999999999   778899999999997654322 233457999999999987     456889999999


Q ss_pred             HHHHHHHHHhCCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCC
Q 009980          230 LGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDS  306 (521)
Q Consensus       230 lG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~  306 (521)
                      |||++|+|++|.+||.+.........+........  ....+|+.+++||.+||..||.+|||+.++++||||....
T Consensus       220 lG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~  294 (326)
T 2x7f_A          220 LGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRL--KSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQP  294 (326)
T ss_dssp             HHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCC--SCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHCCT
T ss_pred             HHHHHHHHHhCCCCCCCCcHHHHHHHhhcCccccC--CccccCHHHHHHHHHHhccChhhCCCHHHHhhChHHhhCc
Confidence            99999999999999988877766666655433221  2356899999999999999999999999999999998654

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=100.00  E-value=4.1e-47  Score=380.67  Aligned_cols=261  Identities=28%  Similarity=0.422  Sum_probs=215.1

Q ss_pred             ccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHH
Q 009980            5 TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALL   84 (521)
Q Consensus         5 ~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (521)
                      .-.+.++|.+.+.||+|+||.||+|+++.  +++.||||++......                          ......+
T Consensus        37 ~~~l~~~y~~~~~lG~G~~g~Vy~~~~~~--~~~~vaiK~~~~~~~~--------------------------~~~~~~~   88 (371)
T 4exu_A           37 AWELPKTYVSPTHVGSGAYGSVCSAIDKR--SGEKVAIKKLSRPFQS--------------------------EIFAKRA   88 (371)
T ss_dssp             EEEEETTEEEEEEEEECSSEEEEEEEETT--TTEEEEEEEECSTTSS--------------------------HHHHHHH
T ss_pred             eecccccEEEEeEEecCCCeEEEEEEECC--CCCEEEEEEecccccc--------------------------hhHHHHH
Confidence            34577899999999999999999999988  7899999998643211                          1224567


Q ss_pred             HHHHHHHHHHhhccCCCCCccceeEEEEeCCeE------EEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 009980           85 TNEILVMRKIVENVSPHPNVIDLYDVYEDQNGV------HLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAAL  158 (521)
Q Consensus        85 ~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~------~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~l  158 (521)
                      .+|+.+++++     +||||+++++++...+..      |+||||+. ++|.+.+.  ..+++..+..++.||+.||.||
T Consensus        89 ~~E~~~l~~l-----~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~--~~~~~~~~~~i~~qi~~aL~~L  160 (371)
T 4exu_A           89 YRELLLLKHM-----QHENVIGLLDVFTPASSLRNFYDFYLVMPFMQ-TDLQKIMG--MEFSEEKIQYLVYQMLKGLKYI  160 (371)
T ss_dssp             HHHHHHHHHC-----CCTTBCCCSEEECSCSSSTTCCCCEEEEECCC-EEHHHHTT--SCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhc-----CCCCchhhhhheeccCCcccceeEEEEEcccc-ccHHHHhh--cCCCHHHHHHHHHHHHHHHHHH
Confidence            8899999998     999999999999877654      99999997 58877763  4599999999999999999999


Q ss_pred             HHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCccccccccccc-CCCCchhhhHHHHHHHHHH
Q 009980          159 HQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQ-DRITSKSDMWSLGVILYIL  237 (521)
Q Consensus       159 H~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~l  237 (521)
                      |++||+||||||+||++   +.++.+||+|||+++....  ......||+.|+|||++.+ ..++.++|||||||++|+|
T Consensus       161 H~~~ivH~Dikp~NIll---~~~~~~kL~Dfg~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el  235 (371)
T 4exu_A          161 HSAGVVHRDLKPGNLAV---NEDCELKILDFGLARHADA--EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEM  235 (371)
T ss_dssp             HHTTCCCSCCCGGGEEE---CTTCCEEECSTTCC----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHH
T ss_pred             HHCCCcCCCcCHHHeEE---CCCCCEEEEecCccccccc--CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHH
Confidence            99999999999999999   7788999999999986543  2345678999999999887 6789999999999999999


Q ss_pred             HhCCCCCCCCCcHHHHHHHHcCCCCCc---------------------------hhhhhccCHHHHHHHHHhccCCCCCC
Q 009980          238 LSGYPPFIAQSNRQKQQMIMAGEFSFY---------------------------EQTWKNISSSAKQLISSLLTVDPNRR  290 (521)
Q Consensus       238 l~g~~pf~~~~~~~~~~~i~~~~~~~~---------------------------~~~~~~~s~~~~~li~~~l~~dp~~R  290 (521)
                      ++|.+||.+.+..+....+.......+                           ...+..+++.+++||.+||+.||.+|
T Consensus       236 ~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  315 (371)
T 4exu_A          236 LTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKR  315 (371)
T ss_dssp             HHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTS
T ss_pred             HhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhc
Confidence            999999998887766666543211111                           12234679999999999999999999


Q ss_pred             CCHHHHHcCCcccCCC
Q 009980          291 PSAQELLNHPWVIGDS  306 (521)
Q Consensus       291 ~t~~~~l~h~~~~~~~  306 (521)
                      ||+.++|+||||....
T Consensus       316 pt~~ell~hp~f~~~~  331 (371)
T 4exu_A          316 LTAAQALTHPFFEPFR  331 (371)
T ss_dssp             CCHHHHHTSGGGTTTC
T ss_pred             CCHHHHhcCcccccCC
Confidence            9999999999998543

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=100.00  E-value=2.9e-47  Score=387.55  Aligned_cols=256  Identities=27%  Similarity=0.358  Sum_probs=209.5

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      ....+|++.+.||+|+||.||+|+++.  +++.||||++.....                                ...+
T Consensus        51 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~--~~~~vaiK~~~~~~~--------------------------------~~~~   96 (420)
T 1j1b_A           51 PQEVSYTDTKVIGNGSFGVVYQAKLCD--SGELVAIKKVLQDKR--------------------------------FKNR   96 (420)
T ss_dssp             CEEEEEEEEEEEEECSSEEEEEEEETT--TCCEEEEEEEECCTT--------------------------------SCCH
T ss_pred             cccceEEeeeEEeeCCCEEEEEEEECC--CCcEEEEEEecccch--------------------------------hHHH
Confidence            345689999999999999999999987  788999999864211                                1236


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeC------CeEEEEEeccCCCchHHHHH----hcCCCCHHHHHHHHHHHHHHHH
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQ------NGVHLILELCSGGELFDRIV----AQERYMEVGAAAVIRQIAEGLA  156 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~------~~~~lv~e~~~gg~L~~~l~----~~~~~~~~~~~~i~~qil~al~  156 (521)
                      |+.+++++     +||||+++++++...      ..+++||||+.+ +|.+.+.    ....+++..++.++.||+.||.
T Consensus        97 E~~il~~l-----~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~  170 (420)
T 1j1b_A           97 ELQIMRKL-----DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA  170 (420)
T ss_dssp             HHHHHHTC-----CCTTBCCEEEEEEEEETTTTEEEEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHc-----CCCCccceeeEEeccCCCCcceeEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHH
Confidence            89999998     999999999998542      247799999986 6665554    3567999999999999999999


Q ss_pred             HHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccC-CCCchhhhHHHHHHHH
Q 009980          157 ALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQD-RITSKSDMWSLGVILY  235 (521)
Q Consensus       157 ~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~  235 (521)
                      |||++||+||||||+|||+.  ...+.+||+|||+|+...........+||+.|+|||++.+. .|+.++|||||||++|
T Consensus       171 ~LH~~~ivHrDlkp~NILl~--~~~~~~kl~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~  248 (420)
T 1j1b_A          171 YIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLA  248 (420)
T ss_dssp             HHHTTTEECSCCSGGGEEEE--TTTTEEEECCCTTCEECCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHH
T ss_pred             HHHHCCccccCCChhhEEEe--CCCCeEEeccchhhhhcccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHH
Confidence            99999999999999999992  13456899999999876555555567899999999998764 7899999999999999


Q ss_pred             HHHhCCCCCCCCCcHHHHHHHHcCC-----------------CCCc---hh-----hhhccCHHHHHHHHHhccCCCCCC
Q 009980          236 ILLSGYPPFIAQSNRQKQQMIMAGE-----------------FSFY---EQ-----TWKNISSSAKQLISSLLTVDPNRR  290 (521)
Q Consensus       236 ~ll~g~~pf~~~~~~~~~~~i~~~~-----------------~~~~---~~-----~~~~~s~~~~~li~~~l~~dp~~R  290 (521)
                      +|++|++||.+.+..+....+....                 +.++   ..     ....+++++++||.+||..||.+|
T Consensus       249 ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R  328 (420)
T 1j1b_A          249 ELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTAR  328 (420)
T ss_dssp             HHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGS
T ss_pred             HHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHC
Confidence            9999999999888766655554311                 1111   01     113568999999999999999999


Q ss_pred             CCHHHHHcCCcccC
Q 009980          291 PSAQELLNHPWVIG  304 (521)
Q Consensus       291 ~t~~~~l~h~~~~~  304 (521)
                      ||+.++|+||||..
T Consensus       329 ~t~~e~l~hp~f~~  342 (420)
T 1j1b_A          329 LTPLEACAHSFFDE  342 (420)
T ss_dssp             CCHHHHHTSGGGGG
T ss_pred             CCHHHHhCCHhhcc
Confidence            99999999999964

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=100.00  E-value=1.5e-46  Score=368.07  Aligned_cols=261  Identities=25%  Similarity=0.409  Sum_probs=216.7

Q ss_pred             ccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHH
Q 009980            5 TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALL   84 (521)
Q Consensus         5 ~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (521)
                      .....++|++.+.||+|+||.||+|.++.  +++.||||++....                              ....+
T Consensus        24 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~--~~~~vaiK~~~~~~------------------------------~~~~~   71 (314)
T 3com_A           24 TKQPEEVFDVLEKLGEGSYGSVYKAIHKE--TGQIVAIKQVPVES------------------------------DLQEI   71 (314)
T ss_dssp             ------CEEEEEECC----CEEEEEEETT--TCCEEEEEEEETTS------------------------------CCHHH
T ss_pred             hhcchhhhhhheeeccCCCeEEEEEEECC--CCCEEEEEecCchH------------------------------HHHHH
Confidence            34567899999999999999999999987  78899999986421                              12347


Q ss_pred             HHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 009980           85 TNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIV-AQERYMEVGAAAVIRQIAEGLAALHQANI  163 (521)
Q Consensus        85 ~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~-~~~~~~~~~~~~i~~qil~al~~lH~~~i  163 (521)
                      .+|+.+++++     +||||+++++++...+.+|+||||+.|++|.+++. ....+++..+..++.||+.||.|||++||
T Consensus        72 ~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i  146 (314)
T 3com_A           72 IKEISIMQQC-----DSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK  146 (314)
T ss_dssp             HHHHHHHHTC-----CCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHhC-----CCCCCccEEEEEEeCCEEEEEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCC
Confidence            8899999998     99999999999999999999999999999999987 45679999999999999999999999999


Q ss_pred             eeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCC-CCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCC
Q 009980          164 VHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYT-DPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYP  242 (521)
Q Consensus       164 ~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~  242 (521)
                      +||||||+||++   +.++.+||+|||++...... .......||+.|+|||++.+..++.++||||||+++|+|++|..
T Consensus       147 ~H~dl~p~Nil~---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~  223 (314)
T 3com_A          147 IHRDIKAGNILL---NTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKP  223 (314)
T ss_dssp             ECCCCSGGGEEE---CTTCCEEECCCTTCEECBTTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSC
T ss_pred             cCCCcCHHHEEE---CCCCCEEEeecccchhhhhhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCC
Confidence            999999999999   77789999999999764332 22344579999999999998899999999999999999999999


Q ss_pred             CCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCC
Q 009980          243 PFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDS  306 (521)
Q Consensus       243 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~  306 (521)
                      ||...........+....... ......+|+.+.+||.+||..||.+|||+.++++||||....
T Consensus       224 p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~~~~~~~~  286 (314)
T 3com_A          224 PYADIHPMRAIFMIPTNPPPT-FRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSAK  286 (314)
T ss_dssp             TTTTSCHHHHHHHHHHSCCCC-CSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHTCC
T ss_pred             CCCCCChHHHHHHHhcCCCcc-cCCcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhcCC
Confidence            998877666555554443221 122355799999999999999999999999999999998654

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=100.00  E-value=9e-47  Score=379.79  Aligned_cols=268  Identities=26%  Similarity=0.328  Sum_probs=217.0

Q ss_pred             ccccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHH
Q 009980            3 QETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDA   82 (521)
Q Consensus         3 ~~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (521)
                      +.+..+.++|++.+.||+|+||+||+|+++.  +++.||||++....                             ....
T Consensus        47 ~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~--~~~~vaiK~~~~~~-----------------------------~~~~   95 (382)
T 2vx3_A           47 KNGEKWMDRYEIDSLIGKGSFGQVVKAYDRV--EQEWVAIKIIKNKK-----------------------------AFLN   95 (382)
T ss_dssp             CTTCEETTTEEEEEEEEEETTEEEEEEEETT--TTEEEEEEEECSSH-----------------------------HHHH
T ss_pred             ecCCEeeeeEEEEEEEeecCCEEEEEEEEcC--CCcEEEEEEEeccH-----------------------------HHHH
Confidence            3456778999999999999999999999987  78899999986311                             1234


Q ss_pred             HHHHHHHHHHHHhhc-cCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 009980           83 LLTNEILVMRKIVEN-VSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ--ERYMEVGAAAVIRQIAEGLAALH  159 (521)
Q Consensus        83 ~~~~E~~~l~~l~~~-~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~al~~lH  159 (521)
                      .+..|+.+++.+... ...|++|+++++++...+..|+||||+.| +|.+++...  +.+++..+..++.||+.||.|||
T Consensus        96 ~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH  174 (382)
T 2vx3_A           96 QAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLA  174 (382)
T ss_dssp             HHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEEEEECCCC-BHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEEEEecCCC-CHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhc
Confidence            467788888887211 11233599999999999999999999965 999999865  46999999999999999999999


Q ss_pred             --HCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHH
Q 009980          160 --QANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYIL  237 (521)
Q Consensus       160 --~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l  237 (521)
                        ..||+||||||+|||+.. +..+.+||+|||+|+....  ......||+.|+|||++.+..++.++|||||||++|+|
T Consensus       175 ~~~~~ivHrDlkp~NIll~~-~~~~~~kL~DFG~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el  251 (382)
T 2vx3_A          175 TPELSIIHCDLKPENILLCN-PKRSAIKIVDFGSSCQLGQ--RIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEM  251 (382)
T ss_dssp             STTTCEECCCCSGGGEEESS-TTSCCEEECCCTTCEETTC--CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHH
T ss_pred             cCCCCEEcCCCCcccEEEec-CCCCcEEEEeccCceeccc--ccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHH
Confidence              579999999999999943 3467899999999987543  23456799999999999999999999999999999999


Q ss_pred             HhCCCCCCCCCcHHHHHHHHcCCCCCchhhhhc-----------------------------------------------
Q 009980          238 LSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKN-----------------------------------------------  270 (521)
Q Consensus       238 l~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~-----------------------------------------------  270 (521)
                      ++|.+||.+.+..+....+......++...+..                                               
T Consensus       252 ltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  331 (382)
T 2vx3_A          252 HTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGP  331 (382)
T ss_dssp             HHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSG
T ss_pred             HhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCC
Confidence            999999999888777766654322211111000                                               


Q ss_pred             -------------cCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCC
Q 009980          271 -------------ISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGD  305 (521)
Q Consensus       271 -------------~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~  305 (521)
                                   .++++++||.+||+.||.+|||+.++|+||||+..
T Consensus       332 ~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~e~L~hp~f~~~  379 (382)
T 2vx3_A          332 GGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKT  379 (382)
T ss_dssp             GGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGCC-
T ss_pred             CccccccccccchhhHHHHHHHHHhcCCChhhCCCHHHHhcCcccccC
Confidence                         01478999999999999999999999999999753

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=100.00  E-value=4.2e-47  Score=379.39  Aligned_cols=259  Identities=25%  Similarity=0.376  Sum_probs=202.7

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      ...++|++.+.||+|+||.||+|+++.  +++.||||++......                             .....+
T Consensus        20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~--~~~~vavK~~~~~~~~-----------------------------~~~~~~   68 (360)
T 3e3p_A           20 KEMDRFQVERMAGQGTFGTVQLGKEKS--TGMSVAIKKVIQDPRF-----------------------------RNRELQ   68 (360)
T ss_dssp             HHHTTEEEC----------CEEEEETT--TCCEEEEEEEECCTTC-----------------------------CCHHHH
T ss_pred             hhccceEEEEEEecCCCeEEEEEEECC--CCCEEEEEEEecCccc-----------------------------cHHHHH
Confidence            445789999999999999999999987  7889999998643211                             123556


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeCCe-------EEEEEeccCCCchHHHH----HhcCCCCHHHHHHHHHHHHHHH
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQNG-------VHLILELCSGGELFDRI----VAQERYMEVGAAAVIRQIAEGL  155 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~~~-------~~lv~e~~~gg~L~~~l----~~~~~~~~~~~~~i~~qil~al  155 (521)
                      ++..+..+     +||||+++++++...+.       +++||||+.| +|.+.+    .....+++..+..++.|++.||
T Consensus        69 ~~~~l~~l-----~h~niv~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al  142 (360)
T 3e3p_A           69 IMQDLAVL-----HHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSI  142 (360)
T ss_dssp             HHHHHHHH-----CCTTBCCEEEEEEEECSSCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhc-----CCCCcccHHHhhhccccccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHH
Confidence            77778888     99999999999976443       8899999987 444333    3567799999999999999999


Q ss_pred             HHHH--HCCCeeccCCCCcEEEeeCCC-CCCEEEeecCCCccCCCCCCcccccCCcccccccccccC-CCCchhhhHHHH
Q 009980          156 AALH--QANIVHRDLKPENCLFLNDRE-DSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQD-RITSKSDMWSLG  231 (521)
Q Consensus       156 ~~lH--~~~i~H~dlkp~Nil~~~~~~-~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG  231 (521)
                      .|||  ++||+||||||+|||+   +. ++.+||+|||+|+............||+.|+|||++.+. .++.++||||||
T Consensus       143 ~~lH~~~~~ivH~Dlkp~NIll---~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG  219 (360)
T 3e3p_A          143 GCLHLPSVNVCHRDIKPHNVLV---NEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVG  219 (360)
T ss_dssp             HHHTSTTTCCBCSCCCGGGEEE---ETTTTEEEECCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHH
T ss_pred             HHHhCCCCCeecCcCCHHHEEE---eCCCCcEEEeeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHH
Confidence            9999  9999999999999999   43 678999999999877665555667899999999998654 489999999999


Q ss_pred             HHHHHHHhCCCCCCCCCcHHHHHHHHcCCCCCchhh--------------------h--------hccCHHHHHHHHHhc
Q 009980          232 VILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQT--------------------W--------KNISSSAKQLISSLL  283 (521)
Q Consensus       232 ~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~--------------------~--------~~~s~~~~~li~~~l  283 (521)
                      |++|+|++|.+||.+.+.......+.......+...                    |        ...++++++||.+||
T Consensus       220 ~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  299 (360)
T 3e3p_A          220 CIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALL  299 (360)
T ss_dssp             HHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHT
T ss_pred             HHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHh
Confidence            999999999999999888777766654322211111                    0        115678999999999


Q ss_pred             cCCCCCCCCHHHHHcCCcccCC
Q 009980          284 TVDPNRRPSAQELLNHPWVIGD  305 (521)
Q Consensus       284 ~~dp~~R~t~~~~l~h~~~~~~  305 (521)
                      +.||.+|||+.++|+||||...
T Consensus       300 ~~dP~~Rpt~~e~l~hp~f~~~  321 (360)
T 3e3p_A          300 QYLPEERMKPYEALCHPYFDEL  321 (360)
T ss_dssp             CSSGGGSCCHHHHTTSGGGGGG
T ss_pred             ccCccccCCHHHHhcCcccccc
Confidence            9999999999999999999854

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=100.00  E-value=7.8e-47  Score=367.93  Aligned_cols=264  Identities=25%  Similarity=0.385  Sum_probs=220.2

Q ss_pred             ccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHH
Q 009980            5 TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALL   84 (521)
Q Consensus         5 ~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (521)
                      ...+.++|++.+.||+|+||.||+|+++.  +++.||+|++.....                            .....+
T Consensus        14 ~~~~~~~y~i~~~lg~G~~g~V~~~~~~~--~~~~~aiK~~~~~~~----------------------------~~~~~~   63 (302)
T 2j7t_A           14 DLDPNEVWEIVGELGDGAFGKVYKAKNKE--TGALAAAKVIETKSE----------------------------EELEDY   63 (302)
T ss_dssp             SSCGGGTEEEEEEEECSTTCCEEEEEETT--TCCEEEEEEEC--------------------------------CCHHHH
T ss_pred             ccCCccceeecceeccCCCeEEEEEEEcC--CCcEEEEEEecCCCH----------------------------HHHHHH
Confidence            34677899999999999999999999987  788999999864221                            123457


Q ss_pred             HHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 009980           85 TNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQANI  163 (521)
Q Consensus        85 ~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~al~~lH~~~i  163 (521)
                      .+|+.+++++     +||||+++++++..++..|+||||++|++|.+++.. ...+++..+..++.||+.||.|||++|+
T Consensus        64 ~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i  138 (302)
T 2j7t_A           64 IVEIEILATC-----DHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRI  138 (302)
T ss_dssp             HHHHHHHHHC-----CCTTBCCEEEEEECC-CEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHhcC-----CCCCEeeeeeeeeeCCeEEEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCc
Confidence            8899999998     999999999999999999999999999999998875 4679999999999999999999999999


Q ss_pred             eeccCCCCcEEEeeCCCCCCEEEeecCCCccCCC-CCCcccccCCccccccccc-----ccCCCCchhhhHHHHHHHHHH
Q 009980          164 VHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGY-TDPVVGLFGSIDYVSPEAL-----LQDRITSKSDMWSLGVILYIL  237 (521)
Q Consensus       164 ~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~~~gt~~y~aPE~~-----~~~~~~~~~DiwslG~il~~l  237 (521)
                      +||||||+||++   +.++.+||+|||++..... ........||+.|+|||++     .+..++.++||||||+++|+|
T Consensus       139 ~H~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l  215 (302)
T 2j7t_A          139 IHRDLKAGNVLM---TLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM  215 (302)
T ss_dssp             CCCCCSGGGEEE---CTTSCEEECCCHHHHHHHHHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHH
T ss_pred             ccCCCCHHHEEE---CCCCCEEEEECCCCccccccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHH
Confidence            999999999999   7778999999998753211 1112344689999999998     356789999999999999999


Q ss_pred             HhCCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCCC
Q 009980          238 LSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSA  307 (521)
Q Consensus       238 l~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~~  307 (521)
                      ++|.+||...+.......+........ .....+|..+.++|.+||..||.+|||+.++++||||.....
T Consensus       216 ~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~  284 (302)
T 2j7t_A          216 AQIEPPHHELNPMRVLLKIAKSDPPTL-LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSITS  284 (302)
T ss_dssp             HHSSCTTTTSCHHHHHHHHHHSCCCCC-SSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTSTTTTTCCC
T ss_pred             hcCCCCCccCCHHHHHHHHhccCCccc-CCccccCHHHHHHHHHHcccChhhCCCHHHHhcChHHhhhcc
Confidence            999999998887777776666544322 123568999999999999999999999999999999986543

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=100.00  E-value=7.6e-47  Score=368.86  Aligned_cols=260  Identities=24%  Similarity=0.362  Sum_probs=211.6

Q ss_pred             cccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHH
Q 009980            4 ETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDAL   83 (521)
Q Consensus         4 ~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (521)
                      ......++|++.+.||+|+||+||+|++    +++.||||++......                          ......
T Consensus        31 ~~~i~~~~y~i~~~lG~G~~g~V~~~~~----~~~~vavK~~~~~~~~--------------------------~~~~~~   80 (309)
T 3p86_A           31 DMDIPWCDLNIKEKIGAGSFGTVHRAEW----HGSDVAVKILMEQDFH--------------------------AERVNE   80 (309)
T ss_dssp             -CBCCGGGEEEEEEEEECSSEEEEEEEE----TTEEEEEEEECCCCCS--------------------------HHHHHH
T ss_pred             cccCChhHceeeeEeecCCCeEEEEEEE----CCCcEEEEEecCCCCC--------------------------HHHHHH
Confidence            3455678999999999999999999976    4678999998653221                          122345


Q ss_pred             HHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH
Q 009980           84 LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQER---YMEVGAAAVIRQIAEGLAALHQ  160 (521)
Q Consensus        84 ~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~---~~~~~~~~i~~qil~al~~lH~  160 (521)
                      +.+|+.+++++     +||||+++++++.+.+.+|+||||+.||+|.+++...+.   +++..+..++.||+.||.|||+
T Consensus        81 ~~~E~~~l~~l-----~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~  155 (309)
T 3p86_A           81 FLREVAIMKRL-----RHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN  155 (309)
T ss_dssp             HHHHHHHHHHC-----CCTTBCCEEEEECSTTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHhC-----CCCCEeeEEEEEEECCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHc
Confidence            78899999999     999999999999999999999999999999999987654   9999999999999999999999


Q ss_pred             CC--CeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC-CcccccCCcccccccccccCCCCchhhhHHHHHHHHHH
Q 009980          161 AN--IVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYIL  237 (521)
Q Consensus       161 ~~--i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l  237 (521)
                      +|  |+||||||+||++   +.++.+||+|||+++...... ......||+.|+|||++.+..++.++|||||||++|+|
T Consensus       156 ~~~~ivH~Dikp~NIll---~~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el  232 (309)
T 3p86_A          156 RNPPIVHRNLKSPNLLV---DKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWEL  232 (309)
T ss_dssp             SSSCCCCTTCCGGGEEE---CTTCCEEECCCC-----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHH
T ss_pred             CCCCEECCCCChhhEEE---eCCCcEEECCCCCCccccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHH
Confidence            99  9999999999999   778899999999997543322 23445799999999999999999999999999999999


Q ss_pred             HhCCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc--CCccc
Q 009980          238 LSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN--HPWVI  303 (521)
Q Consensus       238 l~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~--h~~~~  303 (521)
                      ++|..||.+.+..+....+........  ....+++.+.+||.+||..||.+|||+.++++  ++|+.
T Consensus       233 ltg~~Pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~  298 (309)
T 3p86_A          233 ATLQQPWGNLNPAQVVAAVGFKCKRLE--IPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIK  298 (309)
T ss_dssp             HHCCCTTTTSCHHHHHHHHHHSCCCCC--CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC
T ss_pred             HhCCCCCCCCCHHHHHHHHHhcCCCCC--CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence            999999998888777766644333222  22568999999999999999999999999997  45554

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=100.00  E-value=2.7e-47  Score=385.88  Aligned_cols=266  Identities=23%  Similarity=0.341  Sum_probs=210.6

Q ss_pred             cccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHH
Q 009980            4 ETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDAL   83 (521)
Q Consensus         4 ~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (521)
                      .+..+.++|++.+.||+|+||+||+|++..  +++.||||++....                             .....
T Consensus        31 ~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~--~~~~vavK~~~~~~-----------------------------~~~~~   79 (397)
T 1wak_A           31 IGDLFNGRYHVIRKLGWGHFSTVWLSWDIQ--GKKFVAMKVVKSAE-----------------------------HYTET   79 (397)
T ss_dssp             TTCEETTTEEEEEEEEECSSEEEEEEEETT--TTEEEEEEEECSCH-----------------------------HHHHH
T ss_pred             hhhhcCCeEEEEEEeeecCCeeEEEEEecC--CCeEEEEEEEecCC-----------------------------cchHH
Confidence            456678999999999999999999999987  78899999985311                             12345


Q ss_pred             HHHHHHHHHHHhhccC---CCCCccceeEEEE----eCCeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHH
Q 009980           84 LTNEILVMRKIVENVS---PHPNVIDLYDVYE----DQNGVHLILELCSGGELFDRIVAQ--ERYMEVGAAAVIRQIAEG  154 (521)
Q Consensus        84 ~~~E~~~l~~l~~~~~---~hpniv~~~~~~~----~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~a  154 (521)
                      +.+|+.+++++.....   +||||+++++++.    ....+|+||||+ +++|.+.+...  ..+++..++.++.||+.|
T Consensus        80 ~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~a  158 (397)
T 1wak_A           80 ALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQG  158 (397)
T ss_dssp             HHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHH
Confidence            7889999999843211   2888999999997    556899999999 56777777654  569999999999999999


Q ss_pred             HHHHHHC-CCeeccCCCCcEEEeeCC----------------------------------------------CCCCEEEe
Q 009980          155 LAALHQA-NIVHRDLKPENCLFLNDR----------------------------------------------EDSPLKIM  187 (521)
Q Consensus       155 l~~lH~~-~i~H~dlkp~Nil~~~~~----------------------------------------------~~~~~kl~  187 (521)
                      |.|||++ ||+||||||+|||+..+.                                              ....+||+
T Consensus       159 L~~lH~~~givHrDikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~  238 (397)
T 1wak_A          159 LDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIA  238 (397)
T ss_dssp             HHHHHHTTCEECCCCSGGGEEECCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEEC
T ss_pred             HHHHHHhCCEecCCCCHHHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEec
Confidence            9999999 999999999999993221                                              11379999


Q ss_pred             ecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCcH------HHHHHHHcCCC
Q 009980          188 DFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNR------QKQQMIMAGEF  261 (521)
Q Consensus       188 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~------~~~~~i~~~~~  261 (521)
                      |||+|.....  .....+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+..      .....+.....
T Consensus       239 DfG~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~  316 (397)
T 1wak_A          239 DLGNACWVHK--HFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLG  316 (397)
T ss_dssp             CGGGCEETTB--CSCSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHC
T ss_pred             cccccccccc--cCccCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcC
Confidence            9999986543  234457999999999999999999999999999999999999999765532      12222211100


Q ss_pred             CCch--------------------------------------hhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCccc
Q 009980          262 SFYE--------------------------------------QTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVI  303 (521)
Q Consensus       262 ~~~~--------------------------------------~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~  303 (521)
                      ..+.                                      ......++.+++||.+||..||.+|||+.++|+||||+
T Consensus       317 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~  396 (397)
T 1wak_A          317 KVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLN  396 (397)
T ss_dssp             SCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGG
T ss_pred             CCChHHhhcccccccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCcccc
Confidence            0000                                      00123467789999999999999999999999999996

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=100.00  E-value=1.2e-48  Score=392.63  Aligned_cols=252  Identities=15%  Similarity=0.177  Sum_probs=203.1

Q ss_pred             cccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      ..++|++.+.||+|+||.||+|+++.  +++.||||++.+.....                         ......+.+|
T Consensus        71 ~~~~y~~~~~lG~G~~g~V~~a~~~~--~~~~vavK~~~~~~~~~-------------------------~~~~~~~~~E  123 (377)
T 3byv_A           71 RPRTLVRGTVLGQEDPYAYLEATDQE--TGESFEVHVPYFTERPP-------------------------SNAIKQMKEE  123 (377)
T ss_dssp             CCEEEEEEEEEEEETTEEEEEEEC-C--CCCEEEEEEEEECC-CC-------------------------TTHHHHHHHH
T ss_pred             CCceEEEcceeecCCCEEEEEEEECC--CCcEEEEEEEeeccccc-------------------------hHHHHHHHHH
Confidence            36899999999999999999999987  78899999997543221                         1223567889


Q ss_pred             HHHHHHHhhccCCCCCcccee-------EEEEeCCe-----------------EEEEEeccCCCchHHHHHhcCCCCH--
Q 009980           88 ILVMRKIVENVSPHPNVIDLY-------DVYEDQNG-----------------VHLILELCSGGELFDRIVAQERYME--  141 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~-------~~~~~~~~-----------------~~lv~e~~~gg~L~~~l~~~~~~~~--  141 (521)
                      +.+++.+.  ..+||||++++       +++++++.                 .|+||||+ +|+|.+++...+.+++  
T Consensus       124 ~~~l~~l~--~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~  200 (377)
T 3byv_A          124 VLRLRLLR--GIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTH  200 (377)
T ss_dssp             HHGGGGST--TCCSHHHHHHHHCBCCCSEEEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTT
T ss_pred             HHHHHhcc--ccCCHHHHHHHhhhhhhhhhhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhcccccccc
Confidence            95554431  12899999998       77776643                 89999999 6799999987665666  


Q ss_pred             -----HHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCccccccccc
Q 009980          142 -----VGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEAL  216 (521)
Q Consensus       142 -----~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~  216 (521)
                           ..+..|+.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|+....  .....+| +.|+|||++
T Consensus       201 ~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDikp~NIll---~~~~~~kL~DFG~a~~~~~--~~~~~~g-~~y~aPE~~  274 (377)
T 3byv_A          201 KSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVL---DQRGGVFLTGFEHLVRDGA--RVVSSVS-RGFEPPELE  274 (377)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE---CTTCCEEECCGGGCEETTC--EEECCCC-TTCCCHHHH
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---cCCCCEEEEechhheecCC--cccCCCC-cCccChhhh
Confidence                 7788899999999999999999999999999999   7778999999999986432  3345568 999999999


Q ss_pred             ccC-----------CCCchhhhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccC
Q 009980          217 LQD-----------RITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTV  285 (521)
Q Consensus       217 ~~~-----------~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~  285 (521)
                      .+.           .|+.++|||||||++|+|++|+.||.+.+.......+        ...+..+|+++++||.+||..
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~~--------~~~~~~~~~~~~~li~~~L~~  346 (377)
T 3byv_A          275 ARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEWI--------FRSCKNIPQPVRALLEGFLRY  346 (377)
T ss_dssp             HHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------CCSGGG--------GSSCCCCCHHHHHHHHHHTCS
T ss_pred             cccccccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccccchhhh--------hhhccCCCHHHHHHHHHHcCC
Confidence            887           8999999999999999999999999775543322222        122357899999999999999


Q ss_pred             CCCCCCCHHHHHcCCccc
Q 009980          286 DPNRRPSAQELLNHPWVI  303 (521)
Q Consensus       286 dp~~R~t~~~~l~h~~~~  303 (521)
                      ||.+|||+.++++||||.
T Consensus       347 dp~~Rpt~~e~l~hp~f~  364 (377)
T 3byv_A          347 PKEDRLLPLQAMETPEYE  364 (377)
T ss_dssp             SGGGCCCHHHHHTSHHHH
T ss_pred             CchhCCCHHHHhhChHHH
Confidence            999999999999999995

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=100.00  E-value=6.7e-47  Score=368.93  Aligned_cols=261  Identities=26%  Similarity=0.447  Sum_probs=218.2

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      .+.++|++.+.||+|+||.||+|.+..  +++.||+|++.+.....                        .......+.+
T Consensus         2 ~l~~~y~i~~~lg~G~~g~V~~~~~~~--~~~~~avK~~~~~~~~~------------------------~~~~~~~~~~   55 (305)
T 2wtk_C            2 KLIGKYLMGDLLGEGSYGKVKEVLDSE--TLCRRAVKILKKKKLRR------------------------IPNGEANVKK   55 (305)
T ss_dssp             ---CCBCCCCEEEECSSCEEEEEEBTT--TCCEEEEEEECHHHHHH------------------------STTHHHHHHH
T ss_pred             ccccceeEeeEEecCCCeEEEEEEECC--CCcEEEEEEeccccccc------------------------cchhHHHHHH
Confidence            467899999999999999999999987  78899999996532110                        0123456889


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEE--eCCeEEEEEeccCCCchHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYE--DQNGVHLILELCSGGELFDRIVA--QERYMEVGAAAVIRQIAEGLAALHQAN  162 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~--~~~~~~lv~e~~~gg~L~~~l~~--~~~~~~~~~~~i~~qil~al~~lH~~~  162 (521)
                      |+.+++++     +||||+++++++.  +....|+||||+.++ |.+.+..  ...+++..+..++.||+.||.|||++|
T Consensus        56 E~~~l~~l-----~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~  129 (305)
T 2wtk_C           56 EIQLLRRL-----RHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQG  129 (305)
T ss_dssp             HHHHHTTC-----CCTTBCCEEEEEECC---CEEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHhc-----CCCCeeEEEEEEEcCCCCeEEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99999988     9999999999984  456899999999886 7777765  456999999999999999999999999


Q ss_pred             CeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCC---CCcccccCCcccccccccccCC--CCchhhhHHHHHHHHHH
Q 009980          163 IVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYT---DPVVGLFGSIDYVSPEALLQDR--ITSKSDMWSLGVILYIL  237 (521)
Q Consensus       163 i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~--~~~~~DiwslG~il~~l  237 (521)
                      |+||||||+||++   +.++.+||+|||++......   .......||+.|+|||++.+..  ++.++||||||+++|+|
T Consensus       130 i~H~dlkp~NIl~---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l  206 (305)
T 2wtk_C          130 IVHKDIKPGNLLL---TTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNI  206 (305)
T ss_dssp             EECSCCSGGGEEE---CTTCCEEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHH
T ss_pred             eeecCCCcccEEE---cCCCcEEeeccccccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHH
Confidence            9999999999999   77889999999999765322   2223456999999999997644  37899999999999999


Q ss_pred             HhCCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCC
Q 009980          238 LSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDS  306 (521)
Q Consensus       238 l~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~  306 (521)
                      ++|..||.+.+..+....+..+....+    ..+++.+.+||.+||..||.+|||+.++++||||....
T Consensus       207 ~~g~~p~~~~~~~~~~~~i~~~~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~  271 (305)
T 2wtk_C          207 TTGLYPFEGDNIYKLFENIGKGSYAIP----GDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKH  271 (305)
T ss_dssp             HHSSCSCCCSSHHHHHHHHHHCCCCCC----SSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSCC
T ss_pred             HhCCCCCCCchHHHHHHHHhcCCCCCC----CccCHHHHHHHHHHccCChhhCCCHHHHhcCcccccCC
Confidence            999999999888888888888776554    45899999999999999999999999999999997643

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=100.00  E-value=5.3e-47  Score=364.81  Aligned_cols=260  Identities=28%  Similarity=0.496  Sum_probs=221.7

Q ss_pred             cccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      ..++|++.+.||+|+||.||+|+++.  +++.||+|++......                          ......+.+|
T Consensus         4 ~~~~y~~~~~lg~G~~g~V~~~~~~~--~~~~vaiK~~~~~~~~--------------------------~~~~~~~~~e   55 (279)
T 2w5a_A            4 RAEDYEVLYTIGTGSYGRCQKIRRKS--DGKILVWKELDYGSMT--------------------------EAEKQMLVSE   55 (279)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEETT--TCCEEEEEEEECTTCC--------------------------HHHHHHHHHH
T ss_pred             chhheeeehhccCCCCcEEEEEEECC--CCcEEEEEEEEcccCC--------------------------HHHHHHHHHH
Confidence            46899999999999999999999987  7899999999753221                          1234568899


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEe--CCeEEEEEeccCCCchHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYED--QNGVHLILELCSGGELFDRIVAQ----ERYMEVGAAAVIRQIAEGLAALHQA  161 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~--~~~~~lv~e~~~gg~L~~~l~~~----~~~~~~~~~~i~~qil~al~~lH~~  161 (521)
                      +.+++++     +||||+++++++.+  ...+|+||||++|++|.+++...    ..+++..+..++.|++.||.|||++
T Consensus        56 ~~~l~~l-----~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~  130 (279)
T 2w5a_A           56 VNLLREL-----KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR  130 (279)
T ss_dssp             HHHHHHC-----CCTTBCCEEEEEEEGGGTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhc-----CCCCCCeEEEEEecCCCceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc
Confidence            9999998     99999999998854  57899999999999999998753    3499999999999999999999999


Q ss_pred             C-----CeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC-cccccCCcccccccccccCCCCchhhhHHHHHHHH
Q 009980          162 N-----IVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP-VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY  235 (521)
Q Consensus       162 ~-----i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~  235 (521)
                      |     |+||||||+||++   +.++.+||+|||++........ .....||+.|+|||++.+..++.++||||||+++|
T Consensus       131 ~~~~~~ivH~dl~p~NIl~---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~  207 (279)
T 2w5a_A          131 SDGGHTVLHRDLKPANVFL---DGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLY  207 (279)
T ss_dssp             C------CCCCCSGGGEEE---CSSSCEEECCCCHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHH
T ss_pred             cCCCCeeEEeccchhhEEE---cCCCCEEEecCchheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHH
Confidence            9     9999999999999   7788999999999876543221 23456899999999999889999999999999999


Q ss_pred             HHHhCCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCC
Q 009980          236 ILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDS  306 (521)
Q Consensus       236 ~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~  306 (521)
                      +|++|..||...+..+....+..+.....   ...+|+++.++|.+||..||.+|||+.++++|||+.+..
T Consensus       208 ~l~~g~~p~~~~~~~~~~~~i~~~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~  275 (279)
T 2w5a_A          208 ELCALMPPFTAFSQKELAGKIREGKFRRI---PYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILEHH  275 (279)
T ss_dssp             HHHHSSCSSCCSSHHHHHHHHHHTCCCCC---CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGGG
T ss_pred             HHHHCCCCCcccCHHHHHHHHhhcccccC---CcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhhc
Confidence            99999999999888888888877765322   246899999999999999999999999999999997643

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=100.00  E-value=8.5e-47  Score=370.65  Aligned_cols=268  Identities=28%  Similarity=0.391  Sum_probs=213.6

Q ss_pred             CccccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccH
Q 009980            2 GQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSD   81 (521)
Q Consensus         2 ~~~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (521)
                      .-.+..+.++|++.+.||+|+||.||+|.++.  +++.||||++.....                            ...
T Consensus         3 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~--~~~~vaiK~~~~~~~----------------------------~~~   52 (320)
T 2i6l_A            3 NIHGFDLGSRYMDLKPLGCGGNGLVFSAVDND--CDKRVAIKKIVLTDP----------------------------QSV   52 (320)
T ss_dssp             ---CEEETTTEEEEEECC-----CEEEEEETT--TTEEEEEEEEECCSH----------------------------HHH
T ss_pred             ccccCccCCceeEEEEeccCCCeEEEEEEECC--CCeEEEEEEEecCCh----------------------------HHH
Confidence            34567789999999999999999999999987  788999999864211                            223


Q ss_pred             HHHHHHHHHHHHHhhccCCCCCccceeEEEE--------------eCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHH
Q 009980           82 ALLTNEILVMRKIVENVSPHPNVIDLYDVYE--------------DQNGVHLILELCSGGELFDRIVAQERYMEVGAAAV  147 (521)
Q Consensus        82 ~~~~~E~~~l~~l~~~~~~hpniv~~~~~~~--------------~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i  147 (521)
                      ..+.+|+.+++++     +||||+++++++.              .....|+||||+. |+|.+++.. +++++..++.+
T Consensus        53 ~~~~~e~~~l~~l-----~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~  125 (320)
T 2i6l_A           53 KHALREIKIIRRL-----DHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYME-TDLANVLEQ-GPLLEEHARLF  125 (320)
T ss_dssp             HHHHHHHHHHHTC-----CCTTBCCEEEEECTTSCBCCC----CCSCSEEEEEEECCS-EEHHHHHTT-CCCCHHHHHHH
T ss_pred             HHHHHHHHHHHhc-----CCCCeeEEEEeccccccccccccccccccCceeEEeeccC-CCHHHHhhc-CCccHHHHHHH
Confidence            4578899999998     9999999999873              4478999999997 599988864 67999999999


Q ss_pred             HHHHHHHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCC----CCcccccCCccccccccccc-CCCC
Q 009980          148 IRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYT----DPVVGLFGSIDYVSPEALLQ-DRIT  222 (521)
Q Consensus       148 ~~qil~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~~  222 (521)
                      +.||+.||.|||++||+||||||+||++.  ..++.+||+|||+++.....    .......||+.|+|||.+.+ ..++
T Consensus       126 ~~qi~~~l~~lH~~~i~H~dlkp~Nil~~--~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  203 (320)
T 2i6l_A          126 MYQLLRGLKYIHSANVLHRDLKPANLFIN--TEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYT  203 (320)
T ss_dssp             HHHHHHHHHHHHHTTCBCCCCSGGGEEEE--TTTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCC
T ss_pred             HHHHHHHHHHHHhCCEecCCCCHHHEEEc--CCCCeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCC
Confidence            99999999999999999999999999992  24568999999999865322    12234468999999998865 6789


Q ss_pred             chhhhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHcCCCCCc--------------------------hhhhhccCHHHH
Q 009980          223 SKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFY--------------------------EQTWKNISSSAK  276 (521)
Q Consensus       223 ~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~--------------------------~~~~~~~s~~~~  276 (521)
                      .++|||||||++|+|++|+.||.+.+..+....+........                          ...++.+|++++
T Consensus       204 ~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (320)
T 2i6l_A          204 KAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAV  283 (320)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHH
T ss_pred             chhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHH
Confidence            999999999999999999999998887766666554322111                          122356899999


Q ss_pred             HHHHHhccCCCCCCCCHHHHHcCCcccCCCCc
Q 009980          277 QLISSLLTVDPNRRPSAQELLNHPWVIGDSAK  308 (521)
Q Consensus       277 ~li~~~l~~dp~~R~t~~~~l~h~~~~~~~~~  308 (521)
                      +||.+||..||.+|||+.++|+||||+....+
T Consensus       284 ~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~p  315 (320)
T 2i6l_A          284 DFLEQILTFSPMDRLTAEEALSHPYMSIYSFP  315 (320)
T ss_dssp             HHHHTTSCSSGGGSCCHHHHHTSHHHHTTCC-
T ss_pred             HHHHHHcCCCccccCCHHHHhCCcccccccCc
Confidence            99999999999999999999999999865443

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=100.00  E-value=4.8e-47  Score=377.15  Aligned_cols=279  Identities=19%  Similarity=0.325  Sum_probs=227.0

Q ss_pred             cccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHH
Q 009980            4 ETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDAL   83 (521)
Q Consensus         4 ~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (521)
                      ....+.++|++.+.||+|+||.||+|++    +++.||||++..........           .................
T Consensus        25 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~----~~~~vavK~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~   89 (348)
T 2pml_X           25 EKDKYINDYRIIRTLNQGKFNKIILCEK----DNKFYALKKYEKSLLEKKRD-----------FTKSNNDKISIKSKYDD   89 (348)
T ss_dssp             SSCEEETTEEEEEEEECCSSCCEEEEEE----TTEEEEEEEEEHHHHSSCEE-----------ECCCSSSSCCEEEHHHH
T ss_pred             hcccccCceEEEEEEcCCCCeEEEEEEc----CCceEEEEEeecccccchhh-----------hccccchhhhHHhHHHH
Confidence            3455678999999999999999999998    57899999997643221000           00000000001111256


Q ss_pred             HHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHH------HHh--cCCCCHHHHHHHHHHHHHHH
Q 009980           84 LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDR------IVA--QERYMEVGAAAVIRQIAEGL  155 (521)
Q Consensus        84 ~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~------l~~--~~~~~~~~~~~i~~qil~al  155 (521)
                      +.+|+.+++++     +||||+++++++.+.+..|+||||++|++|.++      +..  ...+++..+..++.||+.||
T Consensus        90 ~~~E~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l  164 (348)
T 2pml_X           90 FKNELQIITDI-----KNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSF  164 (348)
T ss_dssp             HHHHHHHHTTC-----CCTTBCCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhC-----CCCCcceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHH
Confidence            88999999998     899999999999999999999999999999988      655  57799999999999999999


Q ss_pred             HHHHH-CCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccC-CCCc-hhhhHHHHH
Q 009980          156 AALHQ-ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQD-RITS-KSDMWSLGV  232 (521)
Q Consensus       156 ~~lH~-~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~DiwslG~  232 (521)
                      .|||+ +||+||||||+||++   +.++.+||+|||++...... ......||+.|+|||++.+. .++. ++||||||+
T Consensus       165 ~~lH~~~~i~H~dl~p~Nil~---~~~~~~kl~dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~  240 (348)
T 2pml_X          165 SYIHNEKNICHRDVKPSNILM---DKNGRVKLSDFGESEYMVDK-KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGI  240 (348)
T ss_dssp             HHHHHTSCEECCCCCGGGEEE---CTTSCEEECCCTTCEECBTT-EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHH
T ss_pred             HHHhccCCEeecCCChHhEEE---cCCCcEEEeccccccccccc-cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHH
Confidence            99999 999999999999999   77889999999999865332 33456799999999999877 6666 999999999


Q ss_pred             HHHHHHhCCCCCCCCCc-HHHHHHHHcCCCCCchh---------------hhhccCHHHHHHHHHhccCCCCCCCCHHHH
Q 009980          233 ILYILLSGYPPFIAQSN-RQKQQMIMAGEFSFYEQ---------------TWKNISSSAKQLISSLLTVDPNRRPSAQEL  296 (521)
Q Consensus       233 il~~ll~g~~pf~~~~~-~~~~~~i~~~~~~~~~~---------------~~~~~s~~~~~li~~~l~~dp~~R~t~~~~  296 (521)
                      ++|+|++|.+||...+. .+....+..+...++..               ....+|+++.+||.+||..||.+|||+.++
T Consensus       241 il~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~  320 (348)
T 2pml_X          241 CLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDA  320 (348)
T ss_dssp             HHHHHHHSSCSSCCSSCSHHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred             HHHHHHhCCCCCCCCCcHHHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHH
Confidence            99999999999988777 77777777776555421               115689999999999999999999999999


Q ss_pred             HcCCcccCCC
Q 009980          297 LNHPWVIGDS  306 (521)
Q Consensus       297 l~h~~~~~~~  306 (521)
                      ++||||....
T Consensus       321 l~hp~f~~~~  330 (348)
T 2pml_X          321 LKHEWLADTN  330 (348)
T ss_dssp             HTSGGGTTCC
T ss_pred             hcCccccCCC
Confidence            9999998643

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=100.00  E-value=2e-46  Score=373.36  Aligned_cols=265  Identities=26%  Similarity=0.440  Sum_probs=217.6

Q ss_pred             ccccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHH
Q 009980            3 QETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDA   82 (521)
Q Consensus         3 ~~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (521)
                      .....+.++|++.+.||+|+||.||+|+++.  +++.||||++.....                           .....
T Consensus         4 ~~~~~i~~~y~~~~~lg~G~~g~V~~~~~~~--~~~~vaiK~~~~~~~---------------------------~~~~~   54 (353)
T 2b9h_A            4 RIVYNISSDFQLKSLLGEGAYGVVCSATHKP--TGEIVAIKKIEPFDK---------------------------PLFAL   54 (353)
T ss_dssp             TCCCCSCTTEEEEEEEEECSSEEEEEEEETT--TTEEEEEEEECCCSS---------------------------HHHHH
T ss_pred             ccccccccceEEeeEEcCCCCeEEEEEEECC--CCcEEEEEeeccccc---------------------------chHHH
Confidence            4556788999999999999999999999987  788999999853211                           12234


Q ss_pred             HHHHHHHHHHHHhhccCCCCCccceeEEEEeC-----CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 009980           83 LLTNEILVMRKIVENVSPHPNVIDLYDVYEDQ-----NGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAA  157 (521)
Q Consensus        83 ~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~-----~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~  157 (521)
                      .+.+|+.+++++     +||||+++++++...     ...|+||||+. ++|.+++.. +.+++..+..++.||+.||.|
T Consensus        55 ~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~  127 (353)
T 2b9h_A           55 RTLREIKILKHF-----KHENIITIFNIQRPDSFENFNEVYIIQELMQ-TDLHRVIST-QMLSDDHIQYFIYQTLRAVKV  127 (353)
T ss_dssp             HHHHHHHHHHHC-----CCTTBCCEEEECCCSCSTTCCCEEEEECCCS-EEHHHHHHH-CCCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhC-----cCCCcCCeeeeecccccCccceEEEEEeccC-ccHHHHHhh-cCCCHHHHHHHHHHHHHHHHH
Confidence            577899999998     999999999988654     67999999997 589888876 579999999999999999999


Q ss_pred             HHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC-----------CcccccCCccccccccccc-CCCCchh
Q 009980          158 LHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD-----------PVVGLFGSIDYVSPEALLQ-DRITSKS  225 (521)
Q Consensus       158 lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-----------~~~~~~gt~~y~aPE~~~~-~~~~~~~  225 (521)
                      ||++||+||||||+||++   +.++.+||+|||++.......           .....+||+.|+|||++.+ ..++.++
T Consensus       128 LH~~~ivH~Dlkp~Nil~---~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~  204 (353)
T 2b9h_A          128 LHGSNVIHRDLKPSNLLI---NSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAM  204 (353)
T ss_dssp             HHHTTEECSCCCGGGEEE---CTTCCEEECCCTTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHH
T ss_pred             HHHCCeecCCCCHHHeEE---cCCCcEEEEecccccccccccccccCccccccchhhccccccccCCeeeccCCCccchh
Confidence            999999999999999999   778899999999997643221           1223478999999998764 6789999


Q ss_pred             hhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHcCCC----------------------------CCchhhhhccCHHHHH
Q 009980          226 DMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEF----------------------------SFYEQTWKNISSSAKQ  277 (521)
Q Consensus       226 DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~----------------------------~~~~~~~~~~s~~~~~  277 (521)
                      |||||||++|+|++|.+||.+.+.......+.....                            ......++.+++++++
T Consensus       205 Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (353)
T 2b9h_A          205 DVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGID  284 (353)
T ss_dssp             HHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHH
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHH
Confidence            999999999999999999988876655444332100                            0111234578999999


Q ss_pred             HHHHhccCCCCCCCCHHHHHcCCcccCCC
Q 009980          278 LISSLLTVDPNRRPSAQELLNHPWVIGDS  306 (521)
Q Consensus       278 li~~~l~~dp~~R~t~~~~l~h~~~~~~~  306 (521)
                      ||.+||..||.+|||+.++|+||||+...
T Consensus       285 li~~~L~~dP~~Rpt~~ell~hp~~~~~~  313 (353)
T 2b9h_A          285 LLQRMLVFDPAKRITAKEALEHPYLQTYH  313 (353)
T ss_dssp             HHHHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred             HHHHhcCcCcccCCCHHHHhcCccccccC
Confidence            99999999999999999999999998643

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=100.00  E-value=4.3e-46  Score=361.94  Aligned_cols=261  Identities=20%  Similarity=0.283  Sum_probs=213.5

Q ss_pred             CCccccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCcccccccccccccc
Q 009980            1 MGQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVS   80 (521)
Q Consensus         1 ~~~~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (521)
                      |.+.+..+.++|++.+.||+|+||.||+|++..  +++.||||++.....                              
T Consensus         1 Ms~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~--~~~~vavK~~~~~~~------------------------------   48 (298)
T 1csn_A            1 MSGQNNVVGVHYKVGRRIGEGSFGVIFEGTNLL--NNQQVAIKFEPRRSD------------------------------   48 (298)
T ss_dssp             -----CEETTTEEEEEEEEECSSCEEEEEEETT--TTEEEEEEEEECCTT------------------------------
T ss_pred             CCCcCcccccceEEEEEEeecCCEEEEEEEECC--CCcEEEEEEeccCCc------------------------------
Confidence            677888899999999999999999999999987  789999999864321                              


Q ss_pred             HHHHHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH
Q 009980           81 DALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE-RYMEVGAAAVIRQIAEGLAALH  159 (521)
Q Consensus        81 ~~~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qil~al~~lH  159 (521)
                      ...+.+|+.+++++    .+||||+++++++......|+||||+ |++|.+++...+ .+++..+..++.||+.||.|||
T Consensus        49 ~~~~~~e~~~~~~l----~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH  123 (298)
T 1csn_A           49 APQLRDEYRTYKLL----AGCTGIPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIH  123 (298)
T ss_dssp             SCCHHHHHHHHHHT----TTCTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHH----hcCCCCCeEEeecCCCceeEEEEEec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH
Confidence            12377899999887    47999999999999999999999999 999999998754 5999999999999999999999


Q ss_pred             HCCCeeccCCCCcEEEeeC--CCCCCEEEeecCCCccCCCCC--------CcccccCCcccccccccccCCCCchhhhHH
Q 009980          160 QANIVHRDLKPENCLFLND--REDSPLKIMDFGLSSVEGYTD--------PVVGLFGSIDYVSPEALLQDRITSKSDMWS  229 (521)
Q Consensus       160 ~~~i~H~dlkp~Nil~~~~--~~~~~~kl~Dfg~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~Diws  229 (521)
                      ++||+||||||+||++..+  .....+||+|||+|.......        ......||+.|+|||++.+..++.++||||
T Consensus       124 ~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s  203 (298)
T 1csn_A          124 EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEA  203 (298)
T ss_dssp             TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHH
T ss_pred             hCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHH
Confidence            9999999999999999432  122349999999997643321        124457999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCCCCCCC---cHHHHHHHHcCCCCC-chhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          230 LGVILYILLSGYPPFIAQS---NRQKQQMIMAGEFSF-YEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       230 lG~il~~ll~g~~pf~~~~---~~~~~~~i~~~~~~~-~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      |||++|+|++|+.||.+.+   .......+....... .......+|+++.+++.+||..||.+|||+.++++
T Consensus       204 lG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~  276 (298)
T 1csn_A          204 LGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQG  276 (298)
T ss_dssp             HHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             HHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHH
Confidence            9999999999999998753   333334443332222 23334578999999999999999999999999986

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=100.00  E-value=9.4e-47  Score=377.11  Aligned_cols=274  Identities=24%  Similarity=0.325  Sum_probs=212.1

Q ss_pred             cccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHH
Q 009980            4 ETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDAL   83 (521)
Q Consensus         4 ~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (521)
                      +...+.++|++.+.||+|+||.||+|.+.   .++.||||++.........                 ............
T Consensus        16 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~-----------------~~~~~~~~~~~~   75 (362)
T 3pg1_A           16 ELHAMQSPYTVQRFISSGSYGAVCAGVDS---EGIPVAIKRVFNTVSDGRT-----------------VNILSDSFLCKR   75 (362)
T ss_dssp             HHHHTTCSCEEEEEEEEETTEEEEEEECT---TSCEEEEEEECEECCTTSC-----------------EEGGGSHHHHHH
T ss_pred             HHHHhccceEEeEEeccCCCEEEEEEECC---CCCeEEEEeccccCCccch-----------------hhhhhhhhHHHH
Confidence            44567899999999999999999999986   4789999999654332100                 000001112356


Q ss_pred             HHHHHHHHHHHhhccCCCCCccceeEEEEe-----CCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHH
Q 009980           84 LTNEILVMRKIVENVSPHPNVIDLYDVYED-----QNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAA  157 (521)
Q Consensus        84 ~~~E~~~l~~l~~~~~~hpniv~~~~~~~~-----~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~  157 (521)
                      +.+|+.+++++     +||||+++++++..     ...+|+||||+.| +|.+.+... ..+++..+..++.||+.||.|
T Consensus        76 ~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~  149 (362)
T 3pg1_A           76 VLREIRLLNHF-----HHPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHDQRIVISPQHIQYFMYHILLGLHV  149 (362)
T ss_dssp             HHHHHHHHHHC-----CCTTBCCCSEEEEECCTTTCCEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhC-----CCcCccceeeeEEeccCCCcceEEEEEccCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHH
Confidence            88999999999     99999999999954     3468999999984 888877654 469999999999999999999


Q ss_pred             HHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCccccccccccc-CCCCchhhhHHHHHHHHH
Q 009980          158 LHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQ-DRITSKSDMWSLGVILYI  236 (521)
Q Consensus       158 lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~  236 (521)
                      ||++||+||||||+||++   +.++.+||+|||++.............||+.|+|||++.+ ..++.++|||||||++|+
T Consensus       150 lH~~~ivH~Dlkp~NIl~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~  226 (362)
T 3pg1_A          150 LHEAGVVHRDLHPGNILL---ADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAE  226 (362)
T ss_dssp             HHHTTCCCCCCCGGGEEE---CTTCCEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHH
T ss_pred             HHHCcCEecCCChHHEEE---cCCCCEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHH
Confidence            999999999999999999   7788999999999986555445556679999999999876 678999999999999999


Q ss_pred             HHhCCCCCCCCCcHHHHHHHHcCCCCCc----------------------------hhhhhccCHHHHHHHHHhccCCCC
Q 009980          237 LLSGYPPFIAQSNRQKQQMIMAGEFSFY----------------------------EQTWKNISSSAKQLISSLLTVDPN  288 (521)
Q Consensus       237 ll~g~~pf~~~~~~~~~~~i~~~~~~~~----------------------------~~~~~~~s~~~~~li~~~l~~dp~  288 (521)
                      |++|.+||.+.+..+....+........                            ....+.+++.+.+||.+||..||.
T Consensus       227 l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  306 (362)
T 3pg1_A          227 MFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQ  306 (362)
T ss_dssp             HHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGG
T ss_pred             HHhCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChh
Confidence            9999999998887766665543211111                            112245789999999999999999


Q ss_pred             CCCCHHHHHcCCcccCCC
Q 009980          289 RRPSAQELLNHPWVIGDS  306 (521)
Q Consensus       289 ~R~t~~~~l~h~~~~~~~  306 (521)
                      +|||+.++|+||||....
T Consensus       307 ~Rpt~~ell~hp~f~~~~  324 (362)
T 3pg1_A          307 RRISTEQALRHPYFESLF  324 (362)
T ss_dssp             GSCCHHHHHTSGGGTTTC
T ss_pred             hCCCHHHHHcCchhhhcc
Confidence            999999999999998643

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=100.00  E-value=2.1e-46  Score=373.36  Aligned_cols=270  Identities=25%  Similarity=0.393  Sum_probs=218.4

Q ss_pred             ccccccccceeecccccccCceEEEEeEEccCCCc-ceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccH
Q 009980            3 QETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGET-NQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSD   81 (521)
Q Consensus         3 ~~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~-~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (521)
                      +.+..+.++|++.+.||+|+||.||+|+++.  ++ +.||||+++...                             ...
T Consensus        12 ~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~--~~~~~vavK~~~~~~-----------------------------~~~   60 (355)
T 2eu9_A           12 RIGDWLQERYEIVGNLGEGTFGKVVECLDHA--RGKSQVALKIIRNVG-----------------------------KYR   60 (355)
T ss_dssp             CTTCEETTTEEEEEEEEEETTEEEEEEEETT--TTTEEEEEEEECSCH-----------------------------HHH
T ss_pred             ccCceecccEEEEEEeeccCCeEEEEEEecC--CCceEEEEEEEcccc-----------------------------cch
Confidence            4567789999999999999999999999986  44 689999985311                             223


Q ss_pred             HHHHHHHHHHHHHhhc-cCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHH
Q 009980           82 ALLTNEILVMRKIVEN-VSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE--RYMEVGAAAVIRQIAEGLAAL  158 (521)
Q Consensus        82 ~~~~~E~~~l~~l~~~-~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~al~~l  158 (521)
                      ..+.+|+.+++++... ...|++++.+++++...+.+|+||||+ +++|.+.+....  .+++..+..++.||+.||.||
T Consensus        61 ~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~l  139 (355)
T 2eu9_A           61 EAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFL  139 (355)
T ss_dssp             HHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHH
Confidence            4578899999998321 123344999999999999999999999 667777776653  699999999999999999999


Q ss_pred             HHCCCeeccCCCCcEEEeeC----------------CCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCC
Q 009980          159 HQANIVHRDLKPENCLFLND----------------REDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRIT  222 (521)
Q Consensus       159 H~~~i~H~dlkp~Nil~~~~----------------~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  222 (521)
                      |++||+||||||+|||+...                ...+.+||+|||+++....  ......||+.|+|||++.+..++
T Consensus       140 H~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~  217 (355)
T 2eu9_A          140 HENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHE--HHTTIVATRHYRPPEVILELGWA  217 (355)
T ss_dssp             HTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTS--CCCSSCSCGGGCCHHHHTTCCCC
T ss_pred             HHCCcccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecCccccccc--cccCCcCCCcccCCeeeecCCCC
Confidence            99999999999999999432                2467899999999986433  23445799999999999999999


Q ss_pred             chhhhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHcCCCCCchhhh----------------------------------
Q 009980          223 SKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTW----------------------------------  268 (521)
Q Consensus       223 ~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~----------------------------------  268 (521)
                      .++|||||||++|+|++|.+||.+.+..+....+.......+...+                                  
T Consensus       218 ~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (355)
T 2eu9_A          218 QPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLK  297 (355)
T ss_dssp             THHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGG
T ss_pred             CccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCccc
Confidence            9999999999999999999999988776655544432222221110                                  


Q ss_pred             ------hccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCC
Q 009980          269 ------KNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDS  306 (521)
Q Consensus       269 ------~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~  306 (521)
                            ...+.++.+||.+||..||.+|||+.++|+||||.+..
T Consensus       298 ~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~  341 (355)
T 2eu9_A          298 SYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLT  341 (355)
T ss_dssp             GGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGCC
T ss_pred             ccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcChhhcCCC
Confidence                  11245789999999999999999999999999998643

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=100.00  E-value=6.7e-47  Score=378.26  Aligned_cols=263  Identities=26%  Similarity=0.364  Sum_probs=221.5

Q ss_pred             cccccceeecccccccCceEEEEeEEcc---CCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKT---CGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDA   82 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~---~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (521)
                      +...++|++.+.||+|+||.||+|+...   ..+++.||||+++....                           .....
T Consensus        67 ~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---------------------------~~~~~  119 (367)
T 3l9p_A           67 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS---------------------------EQDEL  119 (367)
T ss_dssp             BCCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCC---------------------------HHHHH
T ss_pred             hcCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccC---------------------------hhhHH
Confidence            3446789999999999999999999542   12677899999853211                           12234


Q ss_pred             HHHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC-------CCCHHHHHHHHHHHHHHH
Q 009980           83 LLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE-------RYMEVGAAAVIRQIAEGL  155 (521)
Q Consensus        83 ~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-------~~~~~~~~~i~~qil~al  155 (521)
                      .+.+|+.+++++     +||||+++++++.+....|+|||||.||+|.+++....       .+++.++..++.||+.||
T Consensus       120 ~~~~E~~~l~~l-----~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL  194 (367)
T 3l9p_A          120 DFLMEALIISKF-----NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC  194 (367)
T ss_dssp             HHHHHHHHHHHC-----CCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhC-----CCCCCCeEEEEEecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHH
Confidence            578899999998     99999999999999999999999999999999998653       589999999999999999


Q ss_pred             HHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCC---CCCCcccccCCcccccccccccCCCCchhhhHHHHH
Q 009980          156 AALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEG---YTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGV  232 (521)
Q Consensus       156 ~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~  232 (521)
                      .|||++||+||||||+|||+..+..+..+||+|||+|+...   .........||+.|+|||++.+..++.++|||||||
T Consensus       195 ~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~  274 (367)
T 3l9p_A          195 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGV  274 (367)
T ss_dssp             HHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHH
T ss_pred             HHHHhCCeeCCCCChhhEEEecCCCCceEEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHH
Confidence            99999999999999999999544455679999999997431   112233456899999999999999999999999999


Q ss_pred             HHHHHHh-CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCccc
Q 009980          233 ILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVI  303 (521)
Q Consensus       233 il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~  303 (521)
                      ++|+|++ |.+||.+.+..+....+..+.....   ...+++.+.+|+.+||+.||.+|||+.++++|.|..
T Consensus       275 il~ellt~g~~pf~~~~~~~~~~~i~~~~~~~~---~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~  343 (367)
T 3l9p_A          275 LLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP---PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC  343 (367)
T ss_dssp             HHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC---CccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            9999998 9999999998888888887754332   256899999999999999999999999999988764

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=100.00  E-value=1.7e-46  Score=369.27  Aligned_cols=264  Identities=25%  Similarity=0.370  Sum_probs=202.2

Q ss_pred             ccccccceeecccccccCceEEEEeEEccCCCcc---eEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccH
Q 009980            5 TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETN---QVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSD   81 (521)
Q Consensus         5 ~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~---~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (521)
                      .....++|++.+.||+|+||.||+|+++.  ++.   .||||++.......                          ...
T Consensus        18 ~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~--~~~~~~~vavK~~~~~~~~~--------------------------~~~   69 (323)
T 3qup_A           18 VLIPEQQFTLGRMLGKGEFGSVREAQLKQ--EDGSFVKVAVKMLKADIIAS--------------------------SDI   69 (323)
T ss_dssp             TBCC---CEEEEEEEEETTEEEEEEEC---------CEEEEEEC------C--------------------------HHH
T ss_pred             cccChhHeEEeceecccCCeEEEEEEEcc--cCCcceeEEEEEecccccCH--------------------------HHH
Confidence            34556789999999999999999999876  333   79999986532211                          224


Q ss_pred             HHHHHHHHHHHHHhhccCCCCCccceeEEEEeCCeE------EEEEeccCCCchHHHHHhcC------CCCHHHHHHHHH
Q 009980           82 ALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGV------HLILELCSGGELFDRIVAQE------RYMEVGAAAVIR  149 (521)
Q Consensus        82 ~~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~------~lv~e~~~gg~L~~~l~~~~------~~~~~~~~~i~~  149 (521)
                      ..+.+|+.+++++     +||||+++++++......      ++||||+.||+|.+++....      .+++..+..++.
T Consensus        70 ~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~  144 (323)
T 3qup_A           70 EEFLREAACMKEF-----DHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMV  144 (323)
T ss_dssp             HHHHHHHHHHTTC-----CCTTBCCCCEEEECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHC-----CCCceehhhceeeccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHH
Confidence            5688999999988     999999999999887665      99999999999999986543      599999999999


Q ss_pred             HHHHHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC---cccccCCcccccccccccCCCCchhh
Q 009980          150 QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALLQDRITSKSD  226 (521)
Q Consensus       150 qil~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~D  226 (521)
                      ||+.||.|||++||+||||||+||++   +.++.+||+|||+|+.......   .....+|+.|+|||.+.+..++.++|
T Consensus       145 qi~~al~~LH~~~ivH~Dikp~NIli---~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  221 (323)
T 3qup_A          145 DIACGMEYLSSRNFIHRDLAARNCML---AEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSD  221 (323)
T ss_dssp             HHHHHHHHHHHTTCCCSCCSGGGEEE---CTTSCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHHcCCcccCCCCcceEEE---cCCCCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccc
Confidence            99999999999999999999999999   7778999999999976543221   22345788899999999999999999


Q ss_pred             hHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCC-------HHHHHc
Q 009980          227 MWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPS-------AQELLN  298 (521)
Q Consensus       227 iwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t-------~~~~l~  298 (521)
                      ||||||++|+|++ |.+||.+.+..+....+..+.....   ...+++++.+|+.+||..||.+|||       .++++.
T Consensus       222 i~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~  298 (323)
T 3qup_A          222 VWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQ---PPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILG  298 (323)
T ss_dssp             HHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCC---CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             hhhHHHHHHHHHhCCCCCccccChHHHHHHHhcCCCCCC---CCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence            9999999999999 9999999988888888777654322   2568999999999999999999999       788889


Q ss_pred             CCcccCCCC
Q 009980          299 HPWVIGDSA  307 (521)
Q Consensus       299 h~~~~~~~~  307 (521)
                      |||+.....
T Consensus       299 ~~~~~~~~~  307 (323)
T 3qup_A          299 HLSVLSTSQ  307 (323)
T ss_dssp             C--------
T ss_pred             HhhhcCCCC
Confidence            999976543

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=100.00  E-value=3.3e-46  Score=371.81  Aligned_cols=261  Identities=28%  Similarity=0.433  Sum_probs=213.6

Q ss_pred             ccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHH
Q 009980            5 TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALL   84 (521)
Q Consensus         5 ~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (521)
                      ...+.++|.+.+.||+|+||.||+|+++.  +++.||||++......                          ......+
T Consensus        19 ~~~l~~~y~~~~~lg~G~~g~V~~~~~~~--~~~~vaiK~~~~~~~~--------------------------~~~~~~~   70 (353)
T 3coi_A           19 AWELPKTYVSPTHVGSGAYGSVCSAIDKR--SGEKVAIKKLSRPFQS--------------------------EIFAKRA   70 (353)
T ss_dssp             EEEEETTEEEEEEEEECSSEEEEEEEETT--TTEEEEEEEESSTTSS--------------------------HHHHHHH
T ss_pred             ccccCceEEEeeeEecCCCeEEEEEEECC--CCCEEEEEEecccccc--------------------------hHHHHHH
Confidence            34567899999999999999999999988  7899999998642211                          1223457


Q ss_pred             HHHHHHHHHHhhccCCCCCccceeEEEEeCCe------EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 009980           85 TNEILVMRKIVENVSPHPNVIDLYDVYEDQNG------VHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAAL  158 (521)
Q Consensus        85 ~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~------~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~l  158 (521)
                      .+|+.+++++     +||||+++++++...+.      +|+||||+. ++|.+.+.  ..+++..+..++.||+.||.||
T Consensus        71 ~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~--~~~~~~~~~~i~~qi~~al~~L  142 (353)
T 3coi_A           71 YRELLLLKHM-----QHENVIGLLDVFTPASSLRNFYDFYLVMPFMQ-TDLQKIMG--LKFSEEKIQYLVYQMLKGLKYI  142 (353)
T ss_dssp             HHHHHHHHHC-----CCTTBCCCSEEECSCSSGGGCCCCEEEEECCS-EEGGGTTT--SCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhc-----CCCCcccHhheEecccccccceeEEEEecccc-CCHHHHhc--CCCCHHHHHHHHHHHHHHHHHH
Confidence            8899999998     99999999999987654      599999997 48877664  3599999999999999999999


Q ss_pred             HHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCccccccccccc-CCCCchhhhHHHHHHHHHH
Q 009980          159 HQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQ-DRITSKSDMWSLGVILYIL  237 (521)
Q Consensus       159 H~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~l  237 (521)
                      |++||+||||||+||++   +.++.+||+|||+++....  ......||+.|+|||++.+ ..++.++|||||||++|+|
T Consensus       143 H~~~ivH~dlkp~NIl~---~~~~~~kl~Dfg~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el  217 (353)
T 3coi_A          143 HSAGVVHRDLKPGNLAV---NEDCELKILDFGLARHADA--EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEM  217 (353)
T ss_dssp             HHTTCCCSSCCGGGEEE---CTTCCEEECSTTCTTC----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHH
T ss_pred             HHCCcccCCCCHHHEeE---CCCCcEEEeecccccCCCC--CccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHH
Confidence            99999999999999999   7788999999999986543  2344578999999999876 6789999999999999999


Q ss_pred             HhCCCCCCCCCcHHHHHHHHcCCCCC---------------------------chhhhhccCHHHHHHHHHhccCCCCCC
Q 009980          238 LSGYPPFIAQSNRQKQQMIMAGEFSF---------------------------YEQTWKNISSSAKQLISSLLTVDPNRR  290 (521)
Q Consensus       238 l~g~~pf~~~~~~~~~~~i~~~~~~~---------------------------~~~~~~~~s~~~~~li~~~l~~dp~~R  290 (521)
                      ++|.+||.+.+..+....+.......                           ....+..+++.+++||.+||..||.+|
T Consensus       218 ~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R  297 (353)
T 3coi_A          218 LTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKR  297 (353)
T ss_dssp             HHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTS
T ss_pred             HhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccC
Confidence            99999999888766655554321110                           112234679999999999999999999


Q ss_pred             CCHHHHHcCCcccCCC
Q 009980          291 PSAQELLNHPWVIGDS  306 (521)
Q Consensus       291 ~t~~~~l~h~~~~~~~  306 (521)
                      ||+.++|+||||....
T Consensus       298 pt~~e~l~hp~f~~~~  313 (353)
T 3coi_A          298 LTAAQALTHPFFEPFR  313 (353)
T ss_dssp             CCHHHHHTSGGGTTTC
T ss_pred             CCHHHHhcCcchhhcc
Confidence            9999999999998543

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=100.00  E-value=6.7e-46  Score=366.02  Aligned_cols=253  Identities=19%  Similarity=0.225  Sum_probs=209.8

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      -.+.++|++.+.||+|+||.||+|+++.  +++.||||++.....                              ...+.
T Consensus         5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~--~~~~vavK~~~~~~~------------------------------~~~~~   52 (330)
T 2izr_A            5 LMVGPNFRVGKKIGCGNFGELRLGKNLY--TNEYVAIKLEPMKSR------------------------------APQLH   52 (330)
T ss_dssp             CEETTTEEEEEECCC-CTTSEEEEEETT--TTEEEEEEEEETTCS------------------------------SCCHH
T ss_pred             EEEcCCeEEEEEeeccCCceEEEEEECC--CCcEEEEEEeccccc------------------------------hHHHH
Confidence            3467899999999999999999999987  789999999864321                              12378


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQANIV  164 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~al~~lH~~~i~  164 (521)
                      +|+.+++++    .+||||+++++++.+.+..|+||||+ |++|.+++.. .+.+++..+..++.||+.||.|||++||+
T Consensus        53 ~E~~~l~~l----~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ii  127 (330)
T 2izr_A           53 LEYRFYKQL----GSGDGIPQVYYFGPCGKYNAMVLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLI  127 (330)
T ss_dssp             HHHHHHHHH----CSCTTSCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHh----hCCCCCCEEEEEEecCCccEEEEEeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            899999988    58999999999999999999999999 9999999986 46899999999999999999999999999


Q ss_pred             eccCCCCcEEEeeCCCCCC-----EEEeecCCCccCCCCCC--------cccccCCcccccccccccCCCCchhhhHHHH
Q 009980          165 HRDLKPENCLFLNDREDSP-----LKIMDFGLSSVEGYTDP--------VVGLFGSIDYVSPEALLQDRITSKSDMWSLG  231 (521)
Q Consensus       165 H~dlkp~Nil~~~~~~~~~-----~kl~Dfg~a~~~~~~~~--------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG  231 (521)
                      ||||||+|||+   +.++.     +||+|||+|+.......        ....+||+.|+|||++.+..++.++||||||
T Consensus       128 HrDlkp~Nill---~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG  204 (330)
T 2izr_A          128 YRDVKPENFLI---GRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALG  204 (330)
T ss_dssp             CCCCCGGGEEE---CCGGGTCTTSEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHH
T ss_pred             ccCCCHHHeee---ccCCCCCCceEEEEEcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHH
Confidence            99999999999   44444     99999999986432221        2356799999999999999999999999999


Q ss_pred             HHHHHHHhCCCCCCCCCcH---HHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          232 VILYILLSGYPPFIAQSNR---QKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       232 ~il~~ll~g~~pf~~~~~~---~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      |++|+|++|.+||.+.+..   +....+.......+........+++.+++.+||..||.+||++.++++
T Consensus       205 ~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~~~li~~~l~~~p~~RP~~~~l~~  274 (330)
T 2izr_A          205 HMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFPEMATYLRYVRRLDFFEKPDYDYLRK  274 (330)
T ss_dssp             HHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCHHHHTTTCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             HHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCHHHHhccChHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence            9999999999999875433   334444444333333322222339999999999999999999998875

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=100.00  E-value=2.5e-46  Score=367.33  Aligned_cols=265  Identities=30%  Similarity=0.474  Sum_probs=217.6

Q ss_pred             ccccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHH
Q 009980            3 QETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDA   82 (521)
Q Consensus         3 ~~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (521)
                      ++.+.+.++|++.+.||+|+||.||+|+++.  +++.||||++.........                     . .....
T Consensus        36 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~--~~~~vavK~~~~~~~~~~~---------------------~-~~~~~   91 (320)
T 3a99_A           36 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVS--DNLPVAIKHVEKDRISDWG---------------------E-LPNGT   91 (320)
T ss_dssp             ----CCTTTEEEEEECSSSSSCEEEEEEETT--TTEEEEEEEEEGGGCCCEE---------------------E-CTTCC
T ss_pred             cccCCccCceEEEEEEeeCCCeEEEEEEECC--CCcEEEEEEEecccchhhh---------------------h-hhhhh
Confidence            4567889999999999999999999999987  7899999999765432100                     0 00112


Q ss_pred             HHHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCC-CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Q 009980           83 LLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSG-GELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQA  161 (521)
Q Consensus        83 ~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~g-g~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~  161 (521)
                      .+.+|+.+++++..   .||||+++++++..++..++|||++.+ ++|.+++...+.+++..+..++.||+.||.|||++
T Consensus        92 ~~~~E~~~l~~l~~---~~~~i~~~~~~~~~~~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~  168 (320)
T 3a99_A           92 RVPMEVVLLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC  168 (320)
T ss_dssp             EEEHHHHHHHHHCS---SSCSBCCEEEEEECSSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhhcc---CCCCceEEEEEEecCCcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            35678999999811   369999999999999999999999986 89999999888999999999999999999999999


Q ss_pred             CCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCC-CchhhhHHHHHHHHHHHhC
Q 009980          162 NIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRI-TSKSDMWSLGVILYILLSG  240 (521)
Q Consensus       162 ~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~~ll~g  240 (521)
                      ||+||||||+||++.  ..++.+||+|||++...... ......||+.|+|||++.+..+ +.++||||||+++|+|++|
T Consensus       169 ~ivH~Dlkp~NIll~--~~~~~~kL~Dfg~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g  245 (320)
T 3a99_A          169 GVLHRDIKDENILID--LNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG  245 (320)
T ss_dssp             TEECCCCSGGGEEEE--TTTTEEEECCCTTCEECCSS-CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHS
T ss_pred             CcEeCCCCHHHEEEe--CCCCCEEEeeCccccccccc-cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHC
Confidence            999999999999992  15678999999999865432 3344579999999999987766 6889999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCCC
Q 009980          241 YPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSA  307 (521)
Q Consensus       241 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~~  307 (521)
                      ..||....      .+..+...++    ..+++++.+||.+||..||.+|||+.++++||||.....
T Consensus       246 ~~pf~~~~------~~~~~~~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~~  302 (320)
T 3a99_A          246 DIPFEHDE------EIIRGQVFFR----QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLL  302 (320)
T ss_dssp             SCSCCSHH------HHHHCCCCCS----SCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCCC
T ss_pred             CCCCCChh------hhhccccccc----ccCCHHHHHHHHHHccCChhhCcCHHHHhcCHhhcCccC
Confidence            99996532      2333333322    468999999999999999999999999999999986543

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=100.00  E-value=2.6e-47  Score=382.30  Aligned_cols=260  Identities=19%  Similarity=0.197  Sum_probs=197.2

Q ss_pred             ccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEI   88 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   88 (521)
                      ...|++.+.||+|+||.||+|+++.  +++.||||++.......                         ......+.+|+
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~~~~~~--~~~~vavK~~~~~~~~~-------------------------~~~~~~~~~E~  113 (371)
T 3q60_A           61 ERKLKLVEPLRVGDRSVVFLVRDVE--RLEDFALKVFTMGAENS-------------------------RSELERLHEAT  113 (371)
T ss_dssp             EEEEEEEEEEEECSSEEEEEEEETT--TTEEEEEEEEECCSTTH-------------------------HHHHHHHHHHH
T ss_pred             ceeeeeeeeccCCCCEEEEEEEECC--CCceeEEEEEEeccccc-------------------------ccHHHHHHHHH
Confidence            3469999999999999999999988  78899999997643211                         12344577888


Q ss_pred             HHHHHHhhccCCCCCcccee-------EEEEeCC-----------------eEEEEEeccCCCchHHHHHhcC-CCCHHH
Q 009980           89 LVMRKIVENVSPHPNVIDLY-------DVYEDQN-----------------GVHLILELCSGGELFDRIVAQE-RYMEVG  143 (521)
Q Consensus        89 ~~l~~l~~~~~~hpniv~~~-------~~~~~~~-----------------~~~lv~e~~~gg~L~~~l~~~~-~~~~~~  143 (521)
                      .+++.+..   +||||++++       +++..++                 .+|||||||. |+|.+++...+ .+++..
T Consensus       114 ~~~~~l~~---~hp~iv~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~  189 (371)
T 3q60_A          114 FAAARLLG---ESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRG  189 (371)
T ss_dssp             HHHHHHHC-------------CBCCCCEEEEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCH
T ss_pred             HHHHHhcc---cChhhhhhceeEEeeehheecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhh
Confidence            88877722   699987755       5655443                 3899999998 79999998643 344444


Q ss_pred             H------HHHHHHHHHHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccc
Q 009980          144 A------AAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALL  217 (521)
Q Consensus       144 ~------~~i~~qil~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~  217 (521)
                      .      ..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|+.....  .....||+.|+|||++.
T Consensus       190 ~~~~~vk~~i~~qi~~aL~~LH~~~ivHrDikp~NIll---~~~~~~kL~DFG~a~~~~~~--~~~~~~t~~y~aPE~~~  264 (371)
T 3q60_A          190 DEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFI---MPDGRLMLGDVSALWKVGTR--GPASSVPVTYAPREFLN  264 (371)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEE---CTTSCEEECCGGGEEETTCE--EEGGGSCGGGCCHHHHT
T ss_pred             hhhhhhHHHHHHHHHHHHHHHHHCCCccCcCCHHHEEE---CCCCCEEEEecceeeecCCC--ccCccCCcCCcChhhcc
Confidence            4      5677999999999999999999999999999   77889999999999865432  22456789999999998


Q ss_pred             c--CCCCchhhhHHHHHHHHHHHhCCCCCCCCCcHHHH--H---HHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCC
Q 009980          218 Q--DRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQ--Q---MIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR  290 (521)
Q Consensus       218 ~--~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~--~---~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R  290 (521)
                      +  ..|+.++|||||||++|+|++|++||.+.......  .   ........+..+.+..+|+.+++||.+||..||.+|
T Consensus       265 ~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  344 (371)
T 3q60_A          265 ASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRR  344 (371)
T ss_dssp             CSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTC
T ss_pred             CCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhC
Confidence            7  67999999999999999999999999876432110  0   011112222333446789999999999999999999


Q ss_pred             CCHHHHHcCCcccC
Q 009980          291 PSAQELLNHPWVIG  304 (521)
Q Consensus       291 ~t~~~~l~h~~~~~  304 (521)
                      ||+.++|+||||..
T Consensus       345 pt~~e~l~hp~f~~  358 (371)
T 3q60_A          345 LLPLEAMETPEFLQ  358 (371)
T ss_dssp             CCHHHHTTSHHHHH
T ss_pred             CCHHHHhcCHHHHH
Confidence            99999999999963

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=100.00  E-value=6.2e-47  Score=368.74  Aligned_cols=263  Identities=28%  Similarity=0.461  Sum_probs=200.7

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      ....++|++.+.||+|+||.||+|.+..  +++.||||++......                           .....+.
T Consensus        11 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~--~~~~vaiK~~~~~~~~---------------------------~~~~~~~   61 (303)
T 2vwi_A           11 SINRDDYELQEVIGSGATAVVQAAYCAP--KKEKVAIKRINLEKCQ---------------------------TSMDELL   61 (303)
T ss_dssp             --CCCCCEEEEECC---CCCEEEEEC------CEEEEECCC---------------------------------------
T ss_pred             ccchhhhhhhheeccccceEEEEEEECC--CCcEEEEEEEEhhhcc---------------------------hhHHHHH
Confidence            3456899999999999999999999887  7889999998643211                           1123467


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh--------cCCCCHHHHHHHHHHHHHHHHH
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA--------QERYMEVGAAAVIRQIAEGLAA  157 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~--------~~~~~~~~~~~i~~qil~al~~  157 (521)
                      +|+.+++++     +||||+++++++...+..|+||||+.|++|.+++..        .+.+++..+..++.||+.||.|
T Consensus        62 ~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~  136 (303)
T 2vwi_A           62 KEIQAMSQC-----HHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEY  136 (303)
T ss_dssp             ----CCCCC-----CCTTBCCEEEEEESSSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhhc-----CCCCEeeEEEEEeecCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHH
Confidence            788888777     899999999999999999999999999999999874        4569999999999999999999


Q ss_pred             HHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC------CcccccCCccccccccccc-CCCCchhhhHHH
Q 009980          158 LHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD------PVVGLFGSIDYVSPEALLQ-DRITSKSDMWSL  230 (521)
Q Consensus       158 lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~~~gt~~y~aPE~~~~-~~~~~~~Diwsl  230 (521)
                      ||++||+||||||+||++   +.++.+||+|||++.......      ......||+.|+|||++.+ ..++.++|||||
T Consensus       137 lH~~~i~H~dl~p~Nil~---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~sl  213 (303)
T 2vwi_A          137 LHKNGQIHRDVKAGNILL---GEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSF  213 (303)
T ss_dssp             HHHTTCCCCCCSGGGEEE---CTTCCEEECCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHH
T ss_pred             HHhCCCCCCCCChhhEEE---cCCCCEEEEeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHH
Confidence            999999999999999999   778899999999986543221      1234569999999999875 568999999999


Q ss_pred             HHHHHHHHhCCCCCCCCCcHHHHHHHHcCCCCCc------hhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccC
Q 009980          231 GVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFY------EQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIG  304 (521)
Q Consensus       231 G~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~------~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~  304 (521)
                      |+++|+|++|..||....................      ...+..++++++++|.+||..||.+|||+.++++||||..
T Consensus       214 G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~  293 (303)
T 2vwi_A          214 GITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQK  293 (303)
T ss_dssp             HHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTSTTC--
T ss_pred             HHHHHHHHhCCCCCccCchhhHHHHHhccCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhChhhhc
Confidence            9999999999999988877766655554433221      1223568899999999999999999999999999999975


Q ss_pred             C
Q 009980          305 D  305 (521)
Q Consensus       305 ~  305 (521)
                      .
T Consensus       294 ~  294 (303)
T 2vwi_A          294 A  294 (303)
T ss_dssp             -
T ss_pred             C
Confidence            4

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=100.00  E-value=2.4e-46  Score=364.44  Aligned_cols=257  Identities=28%  Similarity=0.478  Sum_probs=211.5

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      .+.++|++.+.||+|+||.||+|+++.  +++.||||++....                             .....+.+
T Consensus         3 ~~~~~y~~~~~lg~G~~g~V~~~~~~~--~~~~vaiK~~~~~~-----------------------------~~~~~~~~   51 (303)
T 1zy4_A            3 RYASDFEEIAVLGQGAFGQVVKARNAL--DSRYYAIKKIRHTE-----------------------------EKLSTILS   51 (303)
T ss_dssp             HHHHHEEEEEEEEECSSEEEEEEEETT--TCCEEEEEEEEEEH-----------------------------HHHHHHHH
T ss_pred             cccccchhhheeccCCcEEEEEEEEcC--CCeEEEEEEEeccH-----------------------------HHHHHHHH
Confidence            367899999999999999999999987  78899999985311                             12345788


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEe-------------CCeEEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHH
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYED-------------QNGVHLILELCSGGELFDRIVAQE-RYMEVGAAAVIRQIA  152 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~-------------~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qil  152 (521)
                      |+.+++++     +||||+++++++.+             .+..|+||||++||+|.+++...+ .+++..++.++.||+
T Consensus        52 E~~~l~~l-----~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~  126 (303)
T 1zy4_A           52 EVMLLASL-----NHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQIL  126 (303)
T ss_dssp             HHHHHTTC-----CCTTBCCEEEEEEECCCCCC------CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHH
T ss_pred             HHHHHHhc-----CchHHHHHHHHHHhhcchhhhhcccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHH
Confidence            99999988     99999999999865             457899999999999999998543 578999999999999


Q ss_pred             HHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCC---------------CCcccccCCcccccccccc
Q 009980          153 EGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYT---------------DPVVGLFGSIDYVSPEALL  217 (521)
Q Consensus       153 ~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~---------------~~~~~~~gt~~y~aPE~~~  217 (521)
                      .||.|||++||+||||||+||++   +.++.+||+|||++......               .......||+.|+|||++.
T Consensus       127 ~~l~~LH~~~i~H~dlkp~Nil~---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  203 (303)
T 1zy4_A          127 EALSYIHSQGIIHRDLKPMNIFI---DESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLD  203 (303)
T ss_dssp             HHHHHHHHTTCCCSCCCGGGEEE---CTTSCEEECCCCCCSCTTC-------------------------CTTSCHHHHT
T ss_pred             HHHHHHHhCCeecccCCHHhEEE---cCCCCEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCccccc
Confidence            99999999999999999999999   77889999999999764321               1223456999999999997


Q ss_pred             cC-CCCchhhhHHHHHHHHHHHhCCCCCCC-CCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHH
Q 009980          218 QD-RITSKSDMWSLGVILYILLSGYPPFIA-QSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQE  295 (521)
Q Consensus       218 ~~-~~~~~~DiwslG~il~~ll~g~~pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~  295 (521)
                      +. .++.++|||||||++|+|++   ||.. .........+......++.......++.++++|.+||..||.+|||+.+
T Consensus       204 ~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~  280 (303)
T 1zy4_A          204 GTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGART  280 (303)
T ss_dssp             SCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             CCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHHHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHH
Confidence            64 68999999999999999998   5543 3334555666666666666556678899999999999999999999999


Q ss_pred             HHcCCcccCC
Q 009980          296 LLNHPWVIGD  305 (521)
Q Consensus       296 ~l~h~~~~~~  305 (521)
                      +++||||...
T Consensus       281 ll~h~~~~~~  290 (303)
T 1zy4_A          281 LLNSGWLPVK  290 (303)
T ss_dssp             HHHSSCSCCC
T ss_pred             HhCCCCcCCC
Confidence            9999999753

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=100.00  E-value=6.8e-46  Score=354.90  Aligned_cols=252  Identities=25%  Similarity=0.403  Sum_probs=218.8

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      +.-.++|++.+.||+|+||.||+|.++   ++..||||++....                             .....+.
T Consensus         4 ~l~~~~y~~~~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~-----------------------------~~~~~~~   51 (268)
T 3sxs_A            4 ELKREEITLLKELGSGQFGVVKLGKWK---GQYDVAVKMIKEGS-----------------------------MSEDEFF   51 (268)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEET---TTEEEEEEEECBTT-----------------------------BCHHHHH
T ss_pred             EechhheeeeeeeccCCCceEEEEEec---CceeEEEEEeccCC-----------------------------CcHHHHH
Confidence            455789999999999999999999876   46679999986422                             1235588


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE-RYMEVGAAAVIRQIAEGLAALHQANIV  164 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qil~al~~lH~~~i~  164 (521)
                      +|+.+++++     +||||+++++++.+.+..|+||||++|++|.+++...+ .+++..+..++.|++.||.|||++||+
T Consensus        52 ~E~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~  126 (268)
T 3sxs_A           52 QEAQTMMKL-----SHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFI  126 (268)
T ss_dssp             HHHHHHHHC-----CCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHhC-----CCCCEeeEEEEEccCCceEEEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence            999999998     89999999999999999999999999999999998754 599999999999999999999999999


Q ss_pred             eccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC--cccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CC
Q 009980          165 HRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP--VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GY  241 (521)
Q Consensus       165 H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~  241 (521)
                      ||||||+||++   +.++.+||+|||++........  .....||+.|+|||++.+..++.++||||+|+++|+|++ |.
T Consensus       127 H~dikp~Nil~---~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~  203 (268)
T 3sxs_A          127 HRDLAARNCLV---DRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGK  203 (268)
T ss_dssp             ESSCSGGGEEE---CTTCCEEECCTTCEEECCTTCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTC
T ss_pred             cCCcCcceEEE---CCCCCEEEccCccceecchhhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCC
Confidence            99999999999   7788999999999976543321  223456778999999998899999999999999999999 99


Q ss_pred             CCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCC
Q 009980          242 PPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHP  300 (521)
Q Consensus       242 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~  300 (521)
                      +||...+.......+..+......   ..+|+.+.+++.+||..||.+|||+.+++++-
T Consensus       204 ~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L  259 (268)
T 3sxs_A          204 MPYDLYTNSEVVLKVSQGHRLYRP---HLASDTIYQIMYSCWHELPEKRPTFQQLLSSI  259 (268)
T ss_dssp             CTTTTSCHHHHHHHHHTTCCCCCC---TTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHH
T ss_pred             CCccccChHHHHHHHHcCCCCCCC---CcChHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence            999998888888877776544432   44789999999999999999999999999863

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=5.1e-46  Score=356.00  Aligned_cols=249  Identities=29%  Similarity=0.465  Sum_probs=216.4

Q ss_pred             cccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      -.++|++.+.||+|+||.||+|++.   +++.||+|++....                             .....+.+|
T Consensus         8 ~~~~y~~~~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~-----------------------------~~~~~~~~E   55 (269)
T 4hcu_A            8 DPSELTFVQEIGSGQFGLVHLGYWL---NKDKVAIKTIREGA-----------------------------MSEEDFIEE   55 (269)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEET---TTEEEEEEEECTTS-----------------------------BCHHHHHHH
T ss_pred             ChhhceeeheecCCCccEEEEEEec---CCCeEEEEEecccc-----------------------------cCHHHHHHH
Confidence            3579999999999999999999987   45679999996422                             123458899


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQANIVHR  166 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~~~i~H~  166 (521)
                      +.+++++     +||||+++++++.+++..|+||||++|++|.+++... +.+++..+..++.|++.||.|||++||+||
T Consensus        56 ~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~  130 (269)
T 4hcu_A           56 AEVMMKL-----SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHR  130 (269)
T ss_dssp             HHHHHTC-----CCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred             HHHHHhC-----CCCCEeeEEEEEecCCceEEEEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence            9999998     8999999999999999999999999999999999654 568999999999999999999999999999


Q ss_pred             cCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC--CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CCCC
Q 009980          167 DLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD--PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPP  243 (521)
Q Consensus       167 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~p  243 (521)
                      ||||+||++   +.++.+||+|||++.......  ......||+.|+|||++.+..++.++||||+|+++|+|++ |.+|
T Consensus       131 dikp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p  207 (269)
T 4hcu_A          131 DLAARNCLV---GENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP  207 (269)
T ss_dssp             CCCGGGEEE---CGGGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             CcchheEEE---cCCCCEEeccccccccccccccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCC
Confidence            999999999   677889999999997653321  2233457888999999998999999999999999999999 9999


Q ss_pred             CCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          244 FIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       244 f~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      |.+.+..+....+..+......   ..+++.+.+++.+||..||.+|||+.++++|
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~  260 (269)
T 4hcu_A          208 YENRSNSEVVEDISTGFRLYKP---RLASTHVYQIMNHCWRERPEDRPAFSRLLRQ  260 (269)
T ss_dssp             TTTCCHHHHHHHHHTTCCCCCC---TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCCHHHHHHHHhcCccCCCC---CcCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence            9999888888888776433322   4579999999999999999999999999975

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=100.00  E-value=9.4e-46  Score=370.21  Aligned_cols=255  Identities=24%  Similarity=0.359  Sum_probs=216.4

Q ss_pred             ccccceeecccccccCceEEEEeEEcc-----CCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKT-----CGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSD   81 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~-----~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (521)
                      ...++|++++.||+|+||.||+|++..     ..++..||||+++....                           ....
T Consensus        78 ~~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~---------------------------~~~~  130 (370)
T 2psq_A           78 FPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT---------------------------EKDL  130 (370)
T ss_dssp             CCGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCB---------------------------HHHH
T ss_pred             ccHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcC---------------------------HHHH
Confidence            345799999999999999999998742     12456799999864211                           1123


Q ss_pred             HHHHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC----------------CCCHHHHH
Q 009980           82 ALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE----------------RYMEVGAA  145 (521)
Q Consensus        82 ~~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~----------------~~~~~~~~  145 (521)
                      ..+.+|+.+++++    .+||||+++++++.+.+.+|+||||+.||+|.+++....                .+++.++.
T Consensus       131 ~~~~~E~~~l~~l----~~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (370)
T 2psq_A          131 SDLVSEMEMMKMI----GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV  206 (370)
T ss_dssp             HHHHHHHHHHHHS----CCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHH
T ss_pred             HHHHHHHHHHHHh----cCCCCEeeEEEEEccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHH
Confidence            4578899999887    479999999999999999999999999999999998653                47899999


Q ss_pred             HHHHHHHHHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC---CcccccCCcccccccccccCCCC
Q 009980          146 AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD---PVVGLFGSIDYVSPEALLQDRIT  222 (521)
Q Consensus       146 ~i~~qil~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~  222 (521)
                      .++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|+......   ......||+.|+|||++.+..|+
T Consensus       207 ~i~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~  283 (370)
T 2psq_A          207 SCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT  283 (370)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCCGGGEEE---CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCC
T ss_pred             HHHHHHHHHHHHHHhCCeeccccchhhEEE---CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCC
Confidence            999999999999999999999999999999   778899999999998543322   22334578899999999999999


Q ss_pred             chhhhHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          223 SKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       223 ~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      .++|||||||++|+|++ |..||.+.+..+....+..+....   ....+++++.++|.+||..||.+|||+.++++
T Consensus       284 ~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~  357 (370)
T 2psq_A          284 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMD---KPANCTNELYMMMRDCWHAVPSQRPTFKQLVE  357 (370)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCC---CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCC---CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            99999999999999999 999999988888888777765322   22568999999999999999999999999997

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=100.00  E-value=9.2e-46  Score=359.05  Aligned_cols=250  Identities=27%  Similarity=0.432  Sum_probs=204.6

Q ss_pred             ccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHHh
Q 009980           16 DILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIV   95 (521)
Q Consensus        16 ~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~   95 (521)
                      ..||+|+||.||+|.+..  +++.||||++.....                            .....+.+|+.+++++ 
T Consensus        28 ~~lg~G~~g~Vy~~~~~~--~~~~vaiK~~~~~~~----------------------------~~~~~~~~e~~~l~~l-   76 (295)
T 2clq_A           28 VVLGKGTYGIVYAGRDLS--NQVRIAIKEIPERDS----------------------------RYSQPLHEEIALHKHL-   76 (295)
T ss_dssp             CEEEECSSSEEEEEEETT--TCCEEEEEEEECCCC-------------------------------HHHHHHHHHHHTC-
T ss_pred             EEEeecCcEEEEEEEECC--CCeEEEEEEccCCch----------------------------HHHHHHHHHHHHHHhC-
Confidence            389999999999999987  788999999875321                            1234578999999988 


Q ss_pred             hccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCc
Q 009980           96 ENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ---ERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPEN  172 (521)
Q Consensus        96 ~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~---~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~N  172 (521)
                          +||||+++++++...+..++||||++|++|.+++...   ..+++..+..++.||+.||.|||++||+||||||+|
T Consensus        77 ----~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~N  152 (295)
T 2clq_A           77 ----KHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDN  152 (295)
T ss_dssp             ----CCTTBCCEEEEEEETTEEEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG
T ss_pred             ----CCCCEeeEeeEEEeCCcEEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhh
Confidence                9999999999999999999999999999999999765   246789999999999999999999999999999999


Q ss_pred             EEEeeCCC-CCCEEEeecCCCccCCCCC-CcccccCCcccccccccccCC--CCchhhhHHHHHHHHHHHhCCCCCCCCC
Q 009980          173 CLFLNDRE-DSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALLQDR--ITSKSDMWSLGVILYILLSGYPPFIAQS  248 (521)
Q Consensus       173 il~~~~~~-~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~--~~~~~DiwslG~il~~ll~g~~pf~~~~  248 (521)
                      |++   +. ++.+||+|||++....... ......||+.|+|||++.+..  ++.++||||||+++|+|++|..||....
T Consensus       153 il~---~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~  229 (295)
T 2clq_A          153 VLI---NTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELG  229 (295)
T ss_dssp             EEE---ETTTCCEEECCTTTCEESCC-----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGS
T ss_pred             EEE---ECCCCCEEEeecccccccCCCCCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCC
Confidence            999   44 6789999999997654322 223457999999999997654  8899999999999999999999997654


Q ss_pred             cHHHH--HHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCC
Q 009980          249 NRQKQ--QMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDS  306 (521)
Q Consensus       249 ~~~~~--~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~  306 (521)
                      .....  ......   .....+..+++++.+||.+||..||.+|||+.++|+||||....
T Consensus       230 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~  286 (295)
T 2clq_A          230 EPQAAMFKVGMFK---VHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVSS  286 (295)
T ss_dssp             SHHHHHHHHHHHC---CCCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTSGGGCC--
T ss_pred             chhHHHHhhcccc---ccccccccCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhhcc
Confidence            43321  111111   11122356899999999999999999999999999999998644

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=100.00  E-value=6.1e-46  Score=365.22  Aligned_cols=255  Identities=24%  Similarity=0.331  Sum_probs=215.8

Q ss_pred             cccccceeecccccccCceEEEEeEEccCC-CcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCG-ETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALL   84 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (521)
                      +...++|++.+.||+|+||.||+|+++.++ .+..||||++.....                           ......+
T Consensus        45 ~~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~---------------------------~~~~~~~   97 (325)
T 3kul_A           45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYT---------------------------ERQRRDF   97 (325)
T ss_dssp             BCCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCC---------------------------HHHHHHH
T ss_pred             ccChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCC---------------------------HHHHHHH
Confidence            345679999999999999999999998632 344699999864211                           1224568


Q ss_pred             HHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 009980           85 TNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQANI  163 (521)
Q Consensus        85 ~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~~~i  163 (521)
                      .+|+.+++++     +||||+++++++.+.+..|+||||++||+|.+++... +.+++..+..++.||+.||.|||++||
T Consensus        98 ~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i  172 (325)
T 3kul_A           98 LSEASIMGQF-----DHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGY  172 (325)
T ss_dssp             HHHHHHHTTC-----CCTTBCCEEEEECGGGCCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHhC-----CCCCCCcEEEEEEeCCccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            8899999988     9999999999999999999999999999999999654 579999999999999999999999999


Q ss_pred             eeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC----cccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh
Q 009980          164 VHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP----VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS  239 (521)
Q Consensus       164 ~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~  239 (521)
                      +||||||+|||+   +.++.+||+|||+++.......    .....+|+.|+|||++.+..++.++|||||||++|+|++
T Consensus       173 vH~Dlkp~NIll---~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~  249 (325)
T 3kul_A          173 VHRDLAARNVLV---DSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA  249 (325)
T ss_dssp             ECSCCSGGGEEE---CTTCCEEECCCSSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHT
T ss_pred             eCCCCCcceEEE---CCCCCEEECCCCcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHc
Confidence            999999999999   7788999999999986543221    122346788999999998899999999999999999999


Q ss_pred             -CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          240 -GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       240 -g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                       |..||.+.+..+....+..+.....   ...+++.+.+||.+||..||.+|||+.++++
T Consensus       250 ~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~eil~  306 (325)
T 3kul_A          250 YGERPYWNMTNRDVISSVEEGYRLPA---PMGCPHALHQLMLDCWHKDRAQRPRFSQIVS  306 (325)
T ss_dssp             TSCCTTTTSCHHHHHHHHHTTCCCCC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCCcccCCHHHHHHHHHcCCCCCC---CCCcCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence             9999999988888888877643222   2568999999999999999999999999986

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=100.00  E-value=1.8e-45  Score=354.96  Aligned_cols=252  Identities=25%  Similarity=0.428  Sum_probs=215.8

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      +.-.++|++.+.||+|+||.||+|.++   ++..||||++....                             .....+.
T Consensus        20 ~~~~~~y~~~~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~-----------------------------~~~~~~~   67 (283)
T 3gen_A           20 EIDPKDLTFLKELGTGQFGVVKYGKWR---GQYDVAIKMIKEGS-----------------------------MSEDEFI   67 (283)
T ss_dssp             BCCGGGEEEEEECC---CEEEEEEEET---TTEEEEEEEECTTS-----------------------------BCHHHHH
T ss_pred             cCCHHHHHhHhhcCCCCCceEEEEEEc---CCCeEEEEEecCCC-----------------------------CCHHHHH
Confidence            445679999999999999999999886   46789999986422                             1235588


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQANIV  164 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~al~~lH~~~i~  164 (521)
                      +|+.+++++     +||||+++++++.+.+.+|+||||+.|++|.+++.. ...+++..+..++.|++.||.|||++||+
T Consensus        68 ~E~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~  142 (283)
T 3gen_A           68 EEAKVMMNL-----SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFL  142 (283)
T ss_dssp             HHHHHHHTC-----CCTTBCCEEEEECSSSSEEEEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHhcC-----CCCCEeeEEEEEecCCCeEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence            999999998     899999999999999999999999999999999976 56799999999999999999999999999


Q ss_pred             eccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC--CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CC
Q 009980          165 HRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD--PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GY  241 (521)
Q Consensus       165 H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~  241 (521)
                      ||||||+||++   +.++.+||+|||++.......  ......||+.|+|||++.+..++.++||||+|+++|+|++ |.
T Consensus       143 H~dikp~Nili---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~  219 (283)
T 3gen_A          143 HRDLAARNCLV---NDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGK  219 (283)
T ss_dssp             CSSCSGGGEEE---CTTSCEEECSTTGGGGBCCHHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTC
T ss_pred             CCCCccceEEE---cCCCCEEEccccccccccccccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCC
Confidence            99999999999   778899999999997653321  1223457888999999998899999999999999999998 99


Q ss_pred             CCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCC
Q 009980          242 PPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHP  300 (521)
Q Consensus       242 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~  300 (521)
                      +||...+..+....+..+......   ..+++.+.++|.+||..||.+|||+.++++|-
T Consensus       220 ~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L  275 (283)
T 3gen_A          220 MPYERFTNSETAEHIAQGLRLYRP---HLASEKVYTIMYSCWHEKADERPTFKILLSNI  275 (283)
T ss_dssp             CTTTTSCHHHHHHHHHTTCCCCCC---TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHH
T ss_pred             CCccccChhHHHHHHhcccCCCCC---CcCCHHHHHHHHHHccCChhHCcCHHHHHHHH
Confidence            999998888888888776543332   45789999999999999999999999999753

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=100.00  E-value=1.3e-45  Score=361.94  Aligned_cols=261  Identities=22%  Similarity=0.337  Sum_probs=195.0

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      ..-.++|++.+.||+|+||.||+|+++.  +++.||||++......                          ......+.
T Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~--~~~~vavK~~~~~~~~--------------------------~~~~~~~~   72 (318)
T 2dyl_A           21 QAEINDLENLGEMGSGTCGQVWKMRFRK--TGHVIAVKQMRRSGNK--------------------------EENKRILM   72 (318)
T ss_dssp             ECCGGGEEEEEEC------CEEEEEETT--TCCEEEEEEEETTSCH--------------------------HHHHHHHH
T ss_pred             hhhhccccccceeeecCCeeEEEEEEec--CCeEEEEEEecccccc--------------------------hHHHHHHH
Confidence            3446799999999999999999999987  7889999999753211                          01112233


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC-CC
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQA-NI  163 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~al~~lH~~-~i  163 (521)
                      .+..+++.+     +||||+++++++.+++.+|+||||+ ++.+...... .+.+++..+..++.||+.||.|||++ ||
T Consensus        73 ~~~~~~~~~-----~h~~i~~~~~~~~~~~~~~lv~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i  146 (318)
T 2dyl_A           73 DLDVVLKSH-----DCPYIVQCFGTFITNTDVFIAMELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGV  146 (318)
T ss_dssp             HHHHHHHTT-----TCTTBCCEEEEEECSSEEEEEECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHhc-----CCCceeeEEEEEecCCcEEEEEecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCE
Confidence            333445444     9999999999999999999999999 5555554443 56799999999999999999999996 99


Q ss_pred             eeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccc-----cCCCCchhhhHHHHHHHHHHH
Q 009980          164 VHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALL-----QDRITSKSDMWSLGVILYILL  238 (521)
Q Consensus       164 ~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslG~il~~ll  238 (521)
                      +||||||+||++   +.++.+||+|||++.............||+.|+|||++.     ...++.++|||||||++|+|+
T Consensus       147 ~H~dlkp~Nil~---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~  223 (318)
T 2dyl_A          147 IHRDVKPSNILL---DERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELA  223 (318)
T ss_dssp             CCCCCCGGGEEE---CTTSCEEECCCTTC--------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHH
T ss_pred             EeCCCCHHHEEE---CCCCCEEEEECCCchhccCCccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHH
Confidence            999999999999   778899999999997655444444567999999999984     456889999999999999999


Q ss_pred             hCCCCCCCC-CcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccC
Q 009980          239 SGYPPFIAQ-SNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIG  304 (521)
Q Consensus       239 ~g~~pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~  304 (521)
                      +|..||... ...+....+..+..... +.+..+++++.+||.+||..||.+|||+.++++||||..
T Consensus       224 ~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~  289 (318)
T 2dyl_A          224 TGQFPYKNCKTDFEVLTKVLQEEPPLL-PGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKR  289 (318)
T ss_dssp             HSSCTTTTCCSHHHHHHHHHHSCCCCC-CSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHH
T ss_pred             hCCCCCCCCCccHHHHHHHhccCCCCC-CccCCCCHHHHHHHHHHccCChhHCcCHHHHhhCHHHHh
Confidence            999999874 44455555555543322 223468999999999999999999999999999999974

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=100.00  E-value=5e-46  Score=371.45  Aligned_cols=257  Identities=24%  Similarity=0.342  Sum_probs=211.4

Q ss_pred             cccccceeecccccccCceEEEEeEEcc---CCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKT---CGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDA   82 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~---~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (521)
                      +...++|++.+.||+|+||.||+|++..   ..+++.||||+++....                           .....
T Consensus        18 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---------------------------~~~~~   70 (359)
T 3vhe_A           18 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT---------------------------HSEHR   70 (359)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC---------------------------HHHHH
T ss_pred             cccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCC---------------------------HHHHH
Confidence            4456899999999999999999998431   22678999999964221                           11234


Q ss_pred             HHHHHHHHHHHHhhccCCCCCccceeEEEEeCC-eEEEEEeccCCCchHHHHHhcCC-----------------------
Q 009980           83 LLTNEILVMRKIVENVSPHPNVIDLYDVYEDQN-GVHLILELCSGGELFDRIVAQER-----------------------  138 (521)
Q Consensus        83 ~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~-~~~lv~e~~~gg~L~~~l~~~~~-----------------------  138 (521)
                      .+.+|+.++.++    .+||||+++++++.+.+ .+++|||||.||+|.+++.....                       
T Consensus        71 ~~~~E~~~l~~l----~~hpniv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (359)
T 3vhe_A           71 ALMSELKILIHI----GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIP  146 (359)
T ss_dssp             HHHHHHHHHHHH----CCCTTBCCEEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------
T ss_pred             HHHHHHHHHHhh----cCCcceeeeeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccc
Confidence            588999999998    47899999999998765 49999999999999999976543                       


Q ss_pred             -------------------------------------------CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q 009980          139 -------------------------------------------YMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLF  175 (521)
Q Consensus       139 -------------------------------------------~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~  175 (521)
                                                                 +++..+..++.||+.||.|||++||+||||||+|||+
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll  226 (359)
T 3vhe_A          147 VDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL  226 (359)
T ss_dssp             -------------------------------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE
T ss_pred             hhhhccccccCccccccccccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEE
Confidence                                                       8999999999999999999999999999999999999


Q ss_pred             eeCCCCCCEEEeecCCCccCCCCC---CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCCcHH
Q 009980          176 LNDREDSPLKIMDFGLSSVEGYTD---PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQ  251 (521)
Q Consensus       176 ~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~  251 (521)
                         +.++.+||+|||+++......   ......||+.|+|||++.+..++.++|||||||++|+|++ |.+||.+....+
T Consensus       227 ---~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~  303 (359)
T 3vhe_A          227 ---SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE  303 (359)
T ss_dssp             ---CGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH
T ss_pred             ---cCCCcEEEEeccceeeecccccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH
Confidence               677889999999998653322   2234568899999999999999999999999999999998 999998876554


Q ss_pred             HHH-HHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          252 KQQ-MIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       252 ~~~-~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      ... .+..+... .  ....+++++.+++.+||..||.+|||+.++++|
T Consensus       304 ~~~~~~~~~~~~-~--~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  349 (359)
T 3vhe_A          304 EFCRRLKEGTRM-R--APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  349 (359)
T ss_dssp             HHHHHHHHTCCC-C--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHcCCCC-C--CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence            443 33333222 1  124589999999999999999999999999975

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=100.00  E-value=3.1e-45  Score=358.60  Aligned_cols=266  Identities=27%  Similarity=0.403  Sum_probs=211.2

Q ss_pred             cccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHH
Q 009980            4 ETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDAL   83 (521)
Q Consensus         4 ~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (521)
                      ......++|++.+.||+|+||.||+|.++   +++.||||++......                          ......
T Consensus        22 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~--------------------------~~~~~~   72 (313)
T 3cek_A           22 SMSVKGRIYSILKQIGSGGSSKVFQVLNE---KKQIYAIKYVNLEEAD--------------------------NQTLDS   72 (313)
T ss_dssp             EEEETTEEEEEEEEEECCSSEEEEEEECT---TCCEEEEEEEECSSCC--------------------------HHHHHH
T ss_pred             eeeeccceEEEEEEecCCCCEEEEEEEcC---CCcEEEEEEecccccc--------------------------ccchHH
Confidence            34455678999999999999999999885   4788999999753221                          122355


Q ss_pred             HHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 009980           84 LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANI  163 (521)
Q Consensus        84 ~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i  163 (521)
                      +.+|+.+++++..   .||||+++++++..++..|+||| +.+++|.+++...+.+++..+..++.||+.||.|||++||
T Consensus        73 ~~~E~~~l~~l~~---~~~~iv~~~~~~~~~~~~~lv~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i  148 (313)
T 3cek_A           73 YRNEIAYLNKLQQ---HSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGI  148 (313)
T ss_dssp             HHHHHHHHHHHGG---GCTTBCCEEEEEECSSEEEEEEC-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHhccc---cCCceEEEEEEeecCCEEEEEEe-cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            7899999999821   26999999999999999999999 5688999999998899999999999999999999999999


Q ss_pred             eeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC---cccccCCccccccccccc-----------CCCCchhhhHH
Q 009980          164 VHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALLQ-----------DRITSKSDMWS  229 (521)
Q Consensus       164 ~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-----------~~~~~~~Diws  229 (521)
                      +||||||+||++   + ++.+||+|||++........   .....||+.|+|||++.+           ..++.++||||
T Consensus       149 vH~dlkp~NIl~---~-~~~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~s  224 (313)
T 3cek_A          149 VHSDLKPANFLI---V-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWS  224 (313)
T ss_dssp             CCCCCCGGGEEE---E-TTEEEECCCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHH
T ss_pred             eecCCCcccEEE---E-CCeEEEeeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHH
Confidence            999999999999   2 37899999999986543221   234569999999999875           46888999999


Q ss_pred             HHHHHHHHHhCCCCCCCCCcH-HHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCCCc
Q 009980          230 LGVILYILLSGYPPFIAQSNR-QKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAK  308 (521)
Q Consensus       230 lG~il~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~~~  308 (521)
                      ||+++|+|++|..||...... .....+........  .....++.+.++|.+||..||.+|||+.++++||||.....+
T Consensus       225 lG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~  302 (313)
T 3cek_A          225 LGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIE--FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHP  302 (313)
T ss_dssp             HHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCC--CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHCC---
T ss_pred             HHHHHHHHHhCCCchhhHHHHHHHHHHHHhcccccC--CcccchHHHHHHHHHHccCCcccCcCHHHHhcCccccCCCCc
Confidence            999999999999999775443 33334444332221  124468899999999999999999999999999999865443

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=100.00  E-value=1.9e-45  Score=359.62  Aligned_cols=246  Identities=25%  Similarity=0.383  Sum_probs=207.4

Q ss_pred             ccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEI   88 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   88 (521)
                      .++|++++.||+|+||+||+|.++.  +++.||+|.+....                            ......+.+|+
T Consensus         9 ~~~~~~~~~lG~G~~g~V~~~~~~~--~~~~va~K~~~~~~----------------------------~~~~~~~~~E~   58 (310)
T 3s95_A            9 PSDLIHGEVLGKGCFGQAIKVTHRE--TGEVMVMKELIRFD----------------------------EETQRTFLKEV   58 (310)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEETT--TCCEEEEEEESCCC----------------------------HHHHHHHHHHH
T ss_pred             hhHeeccceecCCCCEEEEEEEECC--CCcEEEEEEeccCC----------------------------HHHHHHHHHHH
Confidence            5799999999999999999999988  78899999984311                            12345688999


Q ss_pred             HHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecc
Q 009980           89 LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQANIVHRD  167 (521)
Q Consensus        89 ~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~al~~lH~~~i~H~d  167 (521)
                      .+++++     +||||+++++++.+++..|+||||+.||+|.+++.. ...+++.++..++.||+.||.|||++||+|||
T Consensus        59 ~~l~~l-----~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~d  133 (310)
T 3s95_A           59 KVMRCL-----EHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRD  133 (310)
T ss_dssp             HHHTTC-----CCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             HHHHhC-----CCcCcccEEEEEecCCeeEEEEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCC
Confidence            999988     899999999999999999999999999999999987 56799999999999999999999999999999


Q ss_pred             CCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCc---------------ccccCCcccccccccccCCCCchhhhHHHHH
Q 009980          168 LKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPV---------------VGLFGSIDYVSPEALLQDRITSKSDMWSLGV  232 (521)
Q Consensus       168 lkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~---------------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~  232 (521)
                      |||+||++   +.++.+||+|||+++........               ...+||+.|+|||++.+..++.++||||+|+
T Consensus       134 lkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~  210 (310)
T 3s95_A          134 LNSHNCLV---RENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGI  210 (310)
T ss_dssp             CSTTSEEE---CTTSCEEECCCTTCEECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHH
T ss_pred             CCcCeEEE---CCCCCEEEeecccceecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHH
Confidence            99999999   77889999999999764322211               1457999999999999999999999999999


Q ss_pred             HHHHHHhCCCCCCCCCcHHH-----HHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          233 ILYILLSGYPPFIAQSNRQK-----QQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       233 il~~ll~g~~pf~~~~~~~~-----~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      ++|+|++|..||........     .......      .....+|+.+.+++.+||..||.+|||+.++++
T Consensus       211 ~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~  275 (310)
T 3s95_A          211 VLCEIIGRVNADPDYLPRTMDFGLNVRGFLDR------YCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEH  275 (310)
T ss_dssp             HHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHH------TCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHhcCCCCCcchhhhHHHHhhhhhccccc------cCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            99999999999865432211     1111111      112567889999999999999999999999986

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=100.00  E-value=8.9e-46  Score=371.56  Aligned_cols=265  Identities=23%  Similarity=0.357  Sum_probs=209.2

Q ss_pred             cccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      ..++|++.+.||+|+||.||+|+++.  +++.||||++....                             .....+.+|
T Consensus        17 ~~~~y~~~~~lg~G~~g~V~~~~~~~--~~~~vaiK~~~~~~-----------------------------~~~~~~~~e   65 (373)
T 1q8y_A           17 KDARYILVRKLGWGHFSTVWLAKDMV--NNTHVAMKIVRGDK-----------------------------VYTEAAEDE   65 (373)
T ss_dssp             TTTTEEEEEEEEECSSEEEEEEEETT--TTEEEEEEEECSCH-----------------------------HHHHHHHHH
T ss_pred             cCCeEEEEEeeeecCCeEEEEEEecC--CCcEEEEEEecCCc-----------------------------cchhhhhHH
Confidence            45799999999999999999999987  78899999986321                             223457889


Q ss_pred             HHHHHHHhhc------cCCCCCccceeEEEEeCC----eEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHH
Q 009980           88 ILVMRKIVEN------VSPHPNVIDLYDVYEDQN----GVHLILELCSGGELFDRIVAQ--ERYMEVGAAAVIRQIAEGL  155 (521)
Q Consensus        88 ~~~l~~l~~~------~~~hpniv~~~~~~~~~~----~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~al  155 (521)
                      +.+++++...      ...||||+++++++...+    .+++||||+ |++|.+++...  ..+++..+..++.||+.||
T Consensus        66 ~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL  144 (373)
T 1q8y_A           66 IKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGL  144 (373)
T ss_dssp             HHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhhcccccchhccccchHHHHHHHhhccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHH
Confidence            9999988321      113899999999998654    789999999 88999999863  4599999999999999999


Q ss_pred             HHHHHC-CCeeccCCCCcEEEeeC---CCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHH
Q 009980          156 AALHQA-NIVHRDLKPENCLFLND---REDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLG  231 (521)
Q Consensus       156 ~~lH~~-~i~H~dlkp~Nil~~~~---~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG  231 (521)
                      .|||++ ||+||||||+|||+..+   +..+.+||+|||+|.....  ......||+.|+|||++.+..++.++||||||
T Consensus       145 ~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG  222 (373)
T 1q8y_A          145 DYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDE--HYTNSIQTREYRSPEVLLGAPWGCGADIWSTA  222 (373)
T ss_dssp             HHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTB--CCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHH
T ss_pred             HHHHhcCCEEecCCChHHeEEeccCCCcCcceEEEcccccccccCC--CCCCCCCCccccCcHHHhCCCCCchHhHHHHH
Confidence            999998 99999999999999543   2334799999999986543  23445799999999999999999999999999


Q ss_pred             HHHHHHHhCCCCCCCCCc------HHHHHHHHcCCCCCch--------------------------------------hh
Q 009980          232 VILYILLSGYPPFIAQSN------RQKQQMIMAGEFSFYE--------------------------------------QT  267 (521)
Q Consensus       232 ~il~~ll~g~~pf~~~~~------~~~~~~i~~~~~~~~~--------------------------------------~~  267 (521)
                      |++|+|++|.+||.+.+.      ......+.......+.                                      ..
T Consensus       223 ~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (373)
T 1q8y_A          223 CLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKF  302 (373)
T ss_dssp             HHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCC
T ss_pred             HHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccC
Confidence            999999999999976542      1222222211111110                                      01


Q ss_pred             hhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCC
Q 009980          268 WKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDS  306 (521)
Q Consensus       268 ~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~  306 (521)
                      ...+++++.+||.+||+.||.+|||+.++|+||||++..
T Consensus       303 ~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  341 (373)
T 1q8y_A          303 SKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTL  341 (373)
T ss_dssp             CHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCT
T ss_pred             CcchHHHHHHHHHHHhccCccccCCHHHHhhChhhhccc
Confidence            134567899999999999999999999999999998643

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=100.00  E-value=2.7e-45  Score=351.27  Aligned_cols=255  Identities=28%  Similarity=0.406  Sum_probs=205.0

Q ss_pred             cccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      -.++|++.+.||+|+||.||+|.+.    ++.||||++.......                        .......+.+|
T Consensus         5 ~~~~~~~~~~lg~G~~g~V~~~~~~----~~~vavK~~~~~~~~~------------------------~~~~~~~~~~e   56 (271)
T 3dtc_A            5 DFAELTLEEIIGIGGFGKVYRAFWI----GDEVAVKAARHDPDED------------------------ISQTIENVRQE   56 (271)
T ss_dssp             CTTSEEEEEEEEEETTEEEEEEEET----TEEEEEEEC----------------------------------CHHHHHHH
T ss_pred             chhheeeeeeeccCCCeEEEEEEEc----CCeEEEEEEecCCccc------------------------HHHHHHHHHHH
Confidence            3579999999999999999999873    6789999986532211                        11223557889


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---Ce
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQAN---IV  164 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~---i~  164 (521)
                      +.+++.+     +||||+++++++.+++..|+||||++|++|.+++. .+.+++..+..++.|++.||.|||++|   |+
T Consensus        57 ~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~  130 (271)
T 3dtc_A           57 AKLFAML-----KHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLS-GKRIPPDILVNWAVQIARGMNYLHDEAIVPII  130 (271)
T ss_dssp             HHHHHHC-----CCTTBCCEEEEECCC--CEEEEECCTTEEHHHHHT-SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCC
T ss_pred             HHHHHhc-----CCCCEeeEEEEEecCCceEEEEEcCCCCCHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhCCCCcee
Confidence            9999998     99999999999999999999999999999988875 467999999999999999999999999   89


Q ss_pred             eccCCCCcEEEeeCC-----CCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh
Q 009980          165 HRDLKPENCLFLNDR-----EDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS  239 (521)
Q Consensus       165 H~dlkp~Nil~~~~~-----~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~  239 (521)
                      ||||||+||++..+.     .++.+||+|||++....... .....||+.|+|||.+.+..++.++||||+|+++|+|++
T Consensus       131 H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~  209 (271)
T 3dtc_A          131 HRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTT-KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLT  209 (271)
T ss_dssp             CSCCSGGGEEESSCCSSSCCSSCCEEECCCCC--------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHH
T ss_pred             ecCCchHHEEEecccccccccCcceEEccCCccccccccc-ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHh
Confidence            999999999994321     26789999999998654332 234579999999999999899999999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          240 GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       240 g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      |..||.+.+.......+.......+.  ...+|+.+.+++.+||..||.+|||+.++++|
T Consensus       210 g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  267 (271)
T 3dtc_A          210 GEVPFRGIDGLAVAYGVAMNKLALPI--PSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQ  267 (271)
T ss_dssp             CCCTTTTSCHHHHHHHHHTSCCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHhhhcCCCCCCC--CcccCHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence            99999998887777777666544332  25689999999999999999999999999974

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=100.00  E-value=7e-45  Score=365.87  Aligned_cols=257  Identities=25%  Similarity=0.366  Sum_probs=219.3

Q ss_pred             cccccceeecccccccCceEEEEeEEccC-----CCcceEEEEEeecCCCCCCCCCCCCCCCCCCCcccccccccccccc
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTC-----GETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVS   80 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (521)
                      +...++|++.+.||+|+||.||+|++...     ..+..||||++.....                           ...
T Consensus        65 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~---------------------------~~~  117 (382)
T 3tt0_A           65 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT---------------------------EKD  117 (382)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCC---------------------------HHH
T ss_pred             ccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccC---------------------------HHH
Confidence            45568999999999999999999997531     1346799999864211                           122


Q ss_pred             HHHHHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC----------------CCCHHHH
Q 009980           81 DALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE----------------RYMEVGA  144 (521)
Q Consensus        81 ~~~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~----------------~~~~~~~  144 (521)
                      ...+.+|+.+++++    .+||||+++++++..++..|+||||+.||+|.+++....                .+++..+
T Consensus       118 ~~~~~~E~~~l~~l----~~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~  193 (382)
T 3tt0_A          118 LSDLISEMEMMKMI----GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL  193 (382)
T ss_dssp             HHHHHHHHHHHHHH----CCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHH
T ss_pred             HHHHHHHHHHHHHh----cCCchhhhheeeeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHH
Confidence            34578899999988    489999999999999999999999999999999998754                4999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC---CcccccCCcccccccccccCCC
Q 009980          145 AAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD---PVVGLFGSIDYVSPEALLQDRI  221 (521)
Q Consensus       145 ~~i~~qil~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~  221 (521)
                      ..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|+......   ......||+.|+|||++.+..+
T Consensus       194 ~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~  270 (382)
T 3tt0_A          194 VSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIY  270 (382)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCC
T ss_pred             HHHHHHHHHHHHHHHhCCEecCCCCcceEEE---cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCC
Confidence            9999999999999999999999999999999   777899999999998654322   2233457889999999999999


Q ss_pred             CchhhhHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          222 TSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       222 ~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      +.++|||||||++|+|++ |..||.+.+..+....+..+.....   ...+++++.+||.+||..||.+|||+.+++++
T Consensus       271 ~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  346 (382)
T 3tt0_A          271 THQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDK---PSNCTNELYMMMRDCWHAVPSQRPTFKQLVED  346 (382)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCC---CSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC---CccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            999999999999999999 9999999888888887777653322   25689999999999999999999999999974

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=3e-45  Score=357.94  Aligned_cols=257  Identities=24%  Similarity=0.355  Sum_probs=206.8

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      ....++|++.+.||+|+||.||+|+++.  +++.||||++.......                         ......+.
T Consensus        30 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~--~~~~vaiK~~~~~~~~~-------------------------~~~~~~~~   82 (309)
T 2h34_A           30 GTQFGPYRLRRLVGRGGMGDVYEAEDTV--RERIVALKLMSETLSSD-------------------------PVFRTRMQ   82 (309)
T ss_dssp             ----CCEEEEEEEEECSSSEEEEEEETT--TTEEEEEEECGGGGGGS-------------------------HHHHHHHH
T ss_pred             CcEeccEEEEEEEcCCCCeeEEEEEEcC--CCeEEEEEecCcccccC-------------------------HHHHHHHH
Confidence            3456899999999999999999999987  78899999986532211                         11235578


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      +|+.+++++     +||||+++++++..++..|+||||++|++|.+++...+.+++..+..++.||+.||.|||++||+|
T Consensus        83 ~e~~~l~~l-----~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H  157 (309)
T 2h34_A           83 REARTAGRL-----QEPHVVPIHDFGEIDGQLYVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATH  157 (309)
T ss_dssp             HHHHHHTTC-----CCTTBCCEEEEEEETTEEEEEEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             HHHHHHhhc-----CCCCeeEEEEEEeeCCeEEEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCCc
Confidence            899999888     999999999999999999999999999999999998889999999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC--CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCC
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD--PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPP  243 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~p  243 (521)
                      |||||+||++   +.++.+||+|||++.......  ......||+.|+|||++.+..++.++||||||+++|+|++|..|
T Consensus       158 ~dlkp~NIl~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p  234 (309)
T 2h34_A          158 RDVKPENILV---SADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPP  234 (309)
T ss_dssp             SCCCGGGEEE---CTTSCEEECSCCC----------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCS
T ss_pred             CCCChHHEEE---cCCCCEEEecCccCccccccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCC
Confidence            9999999999   777899999999997654322  22345799999999999988999999999999999999999999


Q ss_pred             CCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCC-CHHHHHc
Q 009980          244 FIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRP-SAQELLN  298 (521)
Q Consensus       244 f~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~-t~~~~l~  298 (521)
                      |.+.+.......+ ......+...+..+|+.+.++|.+||..||.+|| |++++++
T Consensus       235 f~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~  289 (309)
T 2h34_A          235 YQGDQLSVMGAHI-NQAIPRPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSA  289 (309)
T ss_dssp             SCSCHHHHHHHHH-HSCCCCGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred             CCCchHHHHHHHh-ccCCCCccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHH
Confidence            9887665444433 3444444455577999999999999999999999 8888775

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.3e-45  Score=361.01  Aligned_cols=265  Identities=29%  Similarity=0.473  Sum_probs=206.6

Q ss_pred             ccccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHH
Q 009980            3 QETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDA   82 (521)
Q Consensus         3 ~~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (521)
                      +..+.+.++|++.+.||+|+||.||+|+++.  +++.||||++.........                      ......
T Consensus        24 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~--~~~~vavK~~~~~~~~~~~----------------------~~~~~~   79 (312)
T 2iwi_A           24 KDREAFEAEYRLGPLLGKGGFGTVFAGHRLT--DRLQVAIKVIPRNRVLGWS----------------------PLSDSV   79 (312)
T ss_dssp             ---------CEEEEEEEEETTEEEEEEECTT--TCCEEEEEECCSTTTC------------------------------C
T ss_pred             cchhhhhhceEEeeEEEcCCCEEEEEEEEcc--CCeEEEEEEEecccccccc----------------------cchhhH
Confidence            4567889999999999999999999999987  7889999999754322100                      001112


Q ss_pred             HHHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEec-cCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Q 009980           83 LLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILEL-CSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQA  161 (521)
Q Consensus        83 ~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~-~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~  161 (521)
                      .+.+|+.++.++... .+||||+++++++...+..++|||+ +.|++|.+++...+.+++..+..++.||+.||.|||++
T Consensus        80 ~~~~e~~~l~~l~~~-~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~  158 (312)
T 2iwi_A           80 TCPLEVALLWKVGAG-GGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSR  158 (312)
T ss_dssp             CCCHHHHHHHHHHSS-CCCSSBCCEEEEC-----CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhccc-CCCCCeeeEEEEEecCCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            355788888887332 2799999999999999999999999 78999999999888899999999999999999999999


Q ss_pred             CCeeccCCCCcEEEeeCC-CCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCC-chhhhHHHHHHHHHHHh
Q 009980          162 NIVHRDLKPENCLFLNDR-EDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRIT-SKSDMWSLGVILYILLS  239 (521)
Q Consensus       162 ~i~H~dlkp~Nil~~~~~-~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwslG~il~~ll~  239 (521)
                      ||+||||||+||++   + .++.+||+|||++...... ......||+.|+|||++.+..+. .++||||||+++|+|++
T Consensus       159 ~i~H~dlkp~Nil~---~~~~~~~kl~dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~  234 (312)
T 2iwi_A          159 GVVHRDIKDENILI---DLRRGCAKLIDFGSGALLHDE-PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVC  234 (312)
T ss_dssp             TEECCCCSGGGEEE---ETTTTEEEECCCSSCEECCSS-CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHH
T ss_pred             CeeecCCChhhEEE---eCCCCeEEEEEcchhhhcccC-cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHH
Confidence            99999999999999   4 5678999999999865532 33456799999999999877664 58999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCC
Q 009980          240 GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDS  306 (521)
Q Consensus       240 g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~  306 (521)
                      |+.||....      .+......++    ..+++.++++|.+||..||.+|||+.++++||||....
T Consensus       235 g~~pf~~~~------~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~~~  291 (312)
T 2iwi_A          235 GDIPFERDQ------EILEAELHFP----AHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPA  291 (312)
T ss_dssp             SSCSCCSHH------HHHHTCCCCC----TTSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC--
T ss_pred             CCCCCCChH------HHhhhccCCc----ccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhcCch
Confidence            999996531      2333333333    46899999999999999999999999999999998643

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=100.00  E-value=2e-45  Score=354.15  Aligned_cols=256  Identities=29%  Similarity=0.390  Sum_probs=206.1

Q ss_pred             cccccccceeecccccccCceEEEEeEEccCC-CcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHH
Q 009980            4 ETRKLTDEYEVTDILGRGGFSVVRRGIKKTCG-ETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDA   82 (521)
Q Consensus         4 ~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (521)
                      +.+...++|++.+.||+|+||.||+|++...+ .+..||+|++.....                           .....
T Consensus         9 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~---------------------------~~~~~   61 (281)
T 1mp8_A            9 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTS---------------------------DSVRE   61 (281)
T ss_dssp             CCBCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTS---------------------------HHHHH
T ss_pred             ceEEehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCC---------------------------HHHHH
Confidence            44566789999999999999999999987522 346799999753211                           12234


Q ss_pred             HHHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC
Q 009980           83 LLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE-RYMEVGAAAVIRQIAEGLAALHQA  161 (521)
Q Consensus        83 ~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qil~al~~lH~~  161 (521)
                      .+.+|+.+++++     +||||+++++++ .++..|+||||+.|++|.+++...+ .+++..+..++.|++.||.|||++
T Consensus        62 ~~~~e~~~l~~l-----~h~~iv~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~  135 (281)
T 1mp8_A           62 KFLQEALTMRQF-----DHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK  135 (281)
T ss_dssp             HHHHHHHHHHTC-----CCTTBCCEEEEE-CSSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhC-----CCCccceEEEEE-ccCccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            578899999988     999999999998 4567899999999999999998654 699999999999999999999999


Q ss_pred             CCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC--cccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh
Q 009980          162 NIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP--VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS  239 (521)
Q Consensus       162 ~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~  239 (521)
                      ||+||||||+||++   +.++.+||+|||+++.......  .....+|+.|+|||++.+..++.++||||||+++|+|++
T Consensus       136 ~i~H~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~  212 (281)
T 1mp8_A          136 RFVHRDIAARNVLV---SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM  212 (281)
T ss_dssp             TCCCSCCSGGGEEE---EETTEEEECC-------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHT
T ss_pred             CeecccccHHHEEE---CCCCCEEECccccccccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHh
Confidence            99999999999999   5567899999999986543321  223357789999999998899999999999999999997


Q ss_pred             -CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          240 -GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       240 -g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                       |.+||.+.+..+....+..+....   ....+|+.+.+++.+||..||.+|||+.++++
T Consensus       213 ~g~~pf~~~~~~~~~~~i~~~~~~~---~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  269 (281)
T 1mp8_A          213 HGVKPFQGVKNNDVIGRIENGERLP---MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA  269 (281)
T ss_dssp             TSCCTTTTCCGGGHHHHHHTTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cCCCCCCcCCHHHHHHHHHcCCCCC---CCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence             999999988888888887765332   23568999999999999999999999999986

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=100.00  E-value=2.1e-45  Score=359.91  Aligned_cols=257  Identities=25%  Similarity=0.342  Sum_probs=218.0

Q ss_pred             ccccccceeecccccccCceEEEEeEEccC---CCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccH
Q 009980            5 TRKLTDEYEVTDILGRGGFSVVRRGIKKTC---GETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSD   81 (521)
Q Consensus         5 ~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (521)
                      .+...++|++.+.||+|+||.||+|.+...   .++..||||++.....                           ....
T Consensus        18 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~---------------------------~~~~   70 (314)
T 2ivs_A           18 WEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENAS---------------------------PSEL   70 (314)
T ss_dssp             TBCCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCC---------------------------HHHH
T ss_pred             cccchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCC---------------------------HHHH
Confidence            344568999999999999999999988431   2558899999864211                           1223


Q ss_pred             HHHHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCC-----------------------
Q 009980           82 ALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQER-----------------------  138 (521)
Q Consensus        82 ~~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~-----------------------  138 (521)
                      ..+.+|+.+++++     +||||+++++++.+.+..|+||||+.|++|.+++.....                       
T Consensus        71 ~~~~~E~~~l~~l-----~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (314)
T 2ivs_A           71 RDLLSEFNVLKQV-----NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDER  145 (314)
T ss_dssp             HHHHHHHHHHTTC-----CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------C
T ss_pred             HHHHHHHHHHhhC-----CCCceeeEEEEEecCCceEEEEeecCCCCHHHHHHHHhhccCCccccccccccccccccccc
Confidence            4578899999988     999999999999999999999999999999999987543                       


Q ss_pred             -CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC---cccccCCccccccc
Q 009980          139 -YMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPE  214 (521)
Q Consensus       139 -~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE  214 (521)
                       +++..+..++.||+.||.|||++||+||||||+||++   +.++.+||+|||++........   .....+|+.|+|||
T Consensus       146 ~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~NIli---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE  222 (314)
T 2ivs_A          146 ALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILV---AEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIE  222 (314)
T ss_dssp             EECHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---ETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHH
T ss_pred             CcCHHHHHHHHHHHHHHHHHHHHCCCcccccchheEEE---cCCCCEEEccccccccccccccceeccCCCCcccccChh
Confidence             8999999999999999999999999999999999999   6678899999999976543322   22345788999999


Q ss_pred             ccccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCH
Q 009980          215 ALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSA  293 (521)
Q Consensus       215 ~~~~~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~  293 (521)
                      ++.+..++.++|||||||++|+|++ |..||.+.+.......+..+....   ....+|+.+.++|.+||..||.+|||+
T Consensus       223 ~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~dp~~Rps~  299 (314)
T 2ivs_A          223 SLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRME---RPDNCSEEMYRLMLQCWKQEPDKRPVF  299 (314)
T ss_dssp             HHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             hhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHhhcCCcCC---CCccCCHHHHHHHHHHccCChhhCcCH
Confidence            9998889999999999999999999 999999988888887777664332   235689999999999999999999999


Q ss_pred             HHHHcC
Q 009980          294 QELLNH  299 (521)
Q Consensus       294 ~~~l~h  299 (521)
                      .+++++
T Consensus       300 ~~l~~~  305 (314)
T 2ivs_A          300 ADISKD  305 (314)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999874

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=100.00  E-value=3.8e-46  Score=367.34  Aligned_cols=263  Identities=23%  Similarity=0.365  Sum_probs=189.8

Q ss_pred             ccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHH
Q 009980            5 TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALL   84 (521)
Q Consensus         5 ~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (521)
                      ...-.++|++.+.||+|+||.||+|.++.  +++.||||++.....                           ......+
T Consensus        17 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~--~~~~vaiK~~~~~~~---------------------------~~~~~~~   67 (327)
T 3aln_A           17 WDFTAEDLKDLGEIGRGAYGSVNKMVHKP--SGQIMAVKRIRSTVD---------------------------EKEQKQL   67 (327)
T ss_dssp             ECCCSCSEEC-CEEEECSSEEEEEEEETT--TTEEEEEEEEECCCC---------------------------HHHHHHH
T ss_pred             cccCHHHhhehheeccCCCEEEEEEEEcC--CCCEEEEEEeecccC---------------------------chHHHHH
Confidence            34456899999999999999999999987  788999999964311                           0112234


Q ss_pred             HHHHH-HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHH
Q 009980           85 TNEIL-VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA-----QERYMEVGAAAVIRQIAEGLAAL  158 (521)
Q Consensus        85 ~~E~~-~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-----~~~~~~~~~~~i~~qil~al~~l  158 (521)
                      ..|+. +++.+     +||||+++++++..++..|+||||+.| +|.+++..     ...+++..+..++.|++.||.||
T Consensus        68 ~~e~~~~~~~~-----~h~niv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~l  141 (327)
T 3aln_A           68 LMDLDVVMRSS-----DCPYIVQFYGALFREGDCWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHL  141 (327)
T ss_dssp             HHHHHHHHSSC-----CCTTBCCEEEEEECSSEEEEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcC-----CCCcEeeeeeEEEeCCceEEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHH
Confidence            44544 33333     999999999999999999999999986 88777763     56799999999999999999999


Q ss_pred             HHC-CCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCccccccccc----ccCCCCchhhhHHHHHH
Q 009980          159 HQA-NIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEAL----LQDRITSKSDMWSLGVI  233 (521)
Q Consensus       159 H~~-~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DiwslG~i  233 (521)
                      |++ ||+||||||+||++   +.++.+||+|||+++............||+.|+|||++    .+..++.++|||||||+
T Consensus       142 H~~~~ivH~dlkp~NIll---~~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~i  218 (327)
T 3aln_A          142 KENLKIIHRDIKPSNILL---DRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGIT  218 (327)
T ss_dssp             HHHHSCCCSCCCGGGEEE---ETTTEEEECCCSSSCC------------------------------CCSHHHHHHHHHH
T ss_pred             hccCCEeECCCCHHHEEE---cCCCCEEEccCCCceecccccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHH
Confidence            999 99999999999999   67788999999999876544444445799999999998    45678999999999999


Q ss_pred             HHHHHhCCCCCCCCCcH-HHHHHHHcCCC-CCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCC
Q 009980          234 LYILLSGYPPFIAQSNR-QKQQMIMAGEF-SFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGD  305 (521)
Q Consensus       234 l~~ll~g~~pf~~~~~~-~~~~~i~~~~~-~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~  305 (521)
                      +|+|++|..||.+.... +....+..+.. .++...+..+++.+.+||.+||..||.+|||+.++++||||...
T Consensus       219 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~  292 (327)
T 3aln_A          219 LYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMY  292 (327)
T ss_dssp             HHHHHHSCCCSSCC-------CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred             HHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhChHHHHh
Confidence            99999999999764422 22222222221 22222335689999999999999999999999999999999743

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=100.00  E-value=9.5e-45  Score=352.11  Aligned_cols=258  Identities=21%  Similarity=0.241  Sum_probs=209.5

Q ss_pred             ccccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHH
Q 009980            3 QETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDA   82 (521)
Q Consensus         3 ~~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (521)
                      .....+.++|++.+.||+|+||.||+|+++.  +++.||||++.....                              ..
T Consensus         2 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~--~~~~vavK~~~~~~~------------------------------~~   49 (296)
T 3uzp_A            2 SMELRVGNRYRLGRKIGSGSFGDIYLGTDIA--AGEEVAIKLECVKTK------------------------------HP   49 (296)
T ss_dssp             ---CEETTTEEEEEEEEEETTEEEEEEEETT--TTEEEEEEEEESCSS------------------------------CC
T ss_pred             CccceeccEEEEEEEEccCCCeEEEEEEEcC--CCcEEEEEEecCCcc------------------------------hh
Confidence            3445678999999999999999999999987  789999999864321                              12


Q ss_pred             HHHHHHHHHHHHhhccCCCCCccceeE-EEEeCCeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHH
Q 009980           83 LLTNEILVMRKIVENVSPHPNVIDLYD-VYEDQNGVHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQ  160 (521)
Q Consensus        83 ~~~~E~~~l~~l~~~~~~hpniv~~~~-~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~al~~lH~  160 (521)
                      .+.+|+.+++++     .|++++..+. ++...+..|+||||+ |++|.+++.. ...+++..+..++.||+.||.|||+
T Consensus        50 ~~~~e~~~l~~l-----~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  123 (296)
T 3uzp_A           50 QLHIESKIYKMM-----QGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS  123 (296)
T ss_dssp             HHHHHHHHHHHH-----TTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHh-----hcCCCCCccccccCCCCceEEEEEec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHh
Confidence            478999999999     7776555444 457778899999999 8999999974 4679999999999999999999999


Q ss_pred             CCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC--------cccccCCcccccccccccCCCCchhhhHHHHH
Q 009980          161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP--------VVGLFGSIDYVSPEALLQDRITSKSDMWSLGV  232 (521)
Q Consensus       161 ~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~--------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~  232 (521)
                      +||+||||||+||++..++.++.+||+|||++........        .....||+.|+|||++.+..++.++|||||||
T Consensus       124 ~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~  203 (296)
T 3uzp_A          124 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGY  203 (296)
T ss_dssp             TTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHH
T ss_pred             CCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHH
Confidence            9999999999999995444678899999999976443221        23457999999999999999999999999999


Q ss_pred             HHHHHHhCCCCCCCCCc---HHHHHHHHcCCCCCc-hhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          233 ILYILLSGYPPFIAQSN---RQKQQMIMAGEFSFY-EQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       233 il~~ll~g~~pf~~~~~---~~~~~~i~~~~~~~~-~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      ++|+|++|+.||.+.+.   .+....+.......+ ...+..+|+++.+++.+||+.||.+|||+.++++
T Consensus       204 il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  273 (296)
T 3uzp_A          204 VLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             HHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred             HHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHH
Confidence            99999999999987432   233444433333222 2234678999999999999999999999999986

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=100.00  E-value=2e-45  Score=364.73  Aligned_cols=255  Identities=25%  Similarity=0.361  Sum_probs=218.2

Q ss_pred             cccccceeecccccccCceEEEEeEEccC---CCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTC---GETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDA   82 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (521)
                      ....++|++.+.||+|+||.||+|+++..   .+++.||||+++....                           .....
T Consensus        43 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---------------------------~~~~~   95 (343)
T 1luf_A           43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS---------------------------ADMQA   95 (343)
T ss_dssp             BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCC---------------------------HHHHH
T ss_pred             EecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccC---------------------------HHHHH
Confidence            44568999999999999999999998742   2558899999864211                           12235


Q ss_pred             HHHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc------------------------CC
Q 009980           83 LLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ------------------------ER  138 (521)
Q Consensus        83 ~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~------------------------~~  138 (521)
                      .+.+|+.+++++     +||||+++++++.+.+..|+||||+.||+|.+++...                        ..
T Consensus        96 ~~~~E~~~l~~l-----~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (343)
T 1luf_A           96 DFQREAALMAEF-----DNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPP  170 (343)
T ss_dssp             HHHHHHHHHHTC-----CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CC
T ss_pred             HHHHHHHHHHhC-----CCCCEEEEEEEEccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCC
Confidence            588999999998     9999999999999999999999999999999999764                        56


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC---CcccccCCcccccccc
Q 009980          139 YMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD---PVVGLFGSIDYVSPEA  215 (521)
Q Consensus       139 ~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~  215 (521)
                      +++.++..++.||+.||.|||++||+||||||+||++   +.++.+||+|||+++......   ......||+.|+|||+
T Consensus       171 l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~  247 (343)
T 1luf_A          171 LSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLV---GENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPES  247 (343)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEE---CCCCeEEEeecCCCcccccCccccccCCCcccceecChhh
Confidence            8999999999999999999999999999999999999   677899999999997543221   2234468899999999


Q ss_pred             cccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHH
Q 009980          216 LLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQ  294 (521)
Q Consensus       216 ~~~~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~  294 (521)
                      +.+..++.++||||||+++|+|++ |..||.+.+..+....+..+.....   ...+|+.+.++|.+||..||.+|||+.
T Consensus       248 ~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rps~~  324 (343)
T 1luf_A          248 IFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILAC---PENCPLELYNLMRLCWSKLPADRPSFC  324 (343)
T ss_dssp             HHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCC---CTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             hccCCcCcccccHHHHHHHHHHHhcCCCcCCCCChHHHHHHHhCCCcCCC---CCCCCHHHHHHHHHHcccCcccCCCHH
Confidence            998899999999999999999999 9999999988888888877765332   256899999999999999999999999


Q ss_pred             HHHc
Q 009980          295 ELLN  298 (521)
Q Consensus       295 ~~l~  298 (521)
                      ++++
T Consensus       325 ~~~~  328 (343)
T 1luf_A          325 SIHR  328 (343)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9986

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=100.00  E-value=6e-45  Score=352.11  Aligned_cols=253  Identities=26%  Similarity=0.385  Sum_probs=220.0

Q ss_pred             cccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHH
Q 009980            4 ETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDAL   83 (521)
Q Consensus         4 ~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (521)
                      ..+...++|++.+.||+|+||.||+|.++.  ++..||||++....                             .....
T Consensus         7 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~--~~~~vaiK~~~~~~-----------------------------~~~~~   55 (288)
T 3kfa_A            7 KWEMERTDITMKHKLGGGQYGEVYEGVWKK--YSLTVAVKTLKEDT-----------------------------MEVEE   55 (288)
T ss_dssp             TTBCCGGGEEEEEESGGGTTCSEEEEEEGG--GTEEEEEEEECSCS-----------------------------THHHH
T ss_pred             cccccccceeEEeecCCCCceeEEEeEecC--CCEEEEEEecCcCH-----------------------------HHHHH
Confidence            455677899999999999999999999987  78899999986421                             12355


Q ss_pred             HHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC
Q 009980           84 LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ--ERYMEVGAAAVIRQIAEGLAALHQA  161 (521)
Q Consensus        84 ~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~al~~lH~~  161 (521)
                      +.+|+.+++++     +||||+++++++.+++.+|+||||+.|++|.+++...  ..+++..+..++.||+.||.|||++
T Consensus        56 ~~~E~~~l~~l-----~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~  130 (288)
T 3kfa_A           56 FLKEAAVMKEI-----KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK  130 (288)
T ss_dssp             HHHHHHHHHHC-----CCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhC-----CCCCEeeEEEEEccCCCEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHC
Confidence            88999999999     9999999999999999999999999999999999864  4599999999999999999999999


Q ss_pred             CCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC--cccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh
Q 009980          162 NIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP--VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS  239 (521)
Q Consensus       162 ~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~  239 (521)
                      ||+||||||+||++   +.++.+||+|||++........  .....+|+.|+|||++.+..++.++||||||+++|+|++
T Consensus       131 ~i~H~dikp~Nil~---~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~  207 (288)
T 3kfa_A          131 NFIHRDLAARNCLV---GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT  207 (288)
T ss_dssp             TCCCSCCSGGGEEE---CGGGCEEECCCCGGGTSCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred             CccCCCCCcceEEE---cCCCCEEEccCccceeccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHh
Confidence            99999999999999   6778899999999986543322  233457889999999998999999999999999999999


Q ss_pred             -CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          240 -GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       240 -g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                       |.+||.+.+.......+.......   ....+|+.+.+|+.+||..||.+|||+.++++
T Consensus       208 ~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~  264 (288)
T 3kfa_A          208 YGMSPYPGIDLSQVYELLEKDYRME---RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ  264 (288)
T ss_dssp             TSCCSSTTCCGGGHHHHHHTTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHhccCCCC---CCCCCCHHHHHHHHHHhCCChhhCcCHHHHHH
Confidence             999999988887777776653322   22568999999999999999999999999986

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=100.00  E-value=9.7e-45  Score=352.61  Aligned_cols=243  Identities=34%  Similarity=0.656  Sum_probs=201.1

Q ss_pred             ccccccceeec-ccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHH
Q 009980            5 TRKLTDEYEVT-DILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDAL   83 (521)
Q Consensus         5 ~~~~~~~Y~~~-~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (521)
                      ...+.++|.+. +.||+|+||.||+|.++.  +++.||||++..                                 ...
T Consensus        12 ~~~~~~~y~~~~~~lg~G~~g~V~~~~~~~--~~~~vaiK~~~~---------------------------------~~~   56 (299)
T 3m2w_A           12 KNAIIDDYKVTSQVLGLGINGKVLQIFNKR--TQEKFALKMLQD---------------------------------CPK   56 (299)
T ss_dssp             CSCGGGTEEEEEEEEEEETTEEEEEEEETT--TCCEEEEEEEEC---------------------------------SHH
T ss_pred             ccccccchhhcCcccccCCCeEEEEEEEcC--CCcEEEEEEecc---------------------------------cHH
Confidence            34567788887 789999999999999987  788999999853                                 123


Q ss_pred             HHHHHHHHHHHhhccCCCCCccceeEEEEe----CCeEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHH
Q 009980           84 LTNEILVMRKIVENVSPHPNVIDLYDVYED----QNGVHLILELCSGGELFDRIVAQE--RYMEVGAAAVIRQIAEGLAA  157 (521)
Q Consensus        84 ~~~E~~~l~~l~~~~~~hpniv~~~~~~~~----~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~al~~  157 (521)
                      ..+|+.++.++    ..||||+++++++..    ...+|+||||++||+|.+++....  .+++..+..++.||+.||.|
T Consensus        57 ~~~e~~~~~~~----~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~  132 (299)
T 3m2w_A           57 ARREVELHWRA----SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQY  132 (299)
T ss_dssp             HHHHHHHHHHH----TTSTTBCCEEEEEEEEETTEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHh----ccCCCchhHHhhhhhhcCCCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHH
Confidence            67888888555    389999999999987    678999999999999999998764  69999999999999999999


Q ss_pred             HHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHH
Q 009980          158 LHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYIL  237 (521)
Q Consensus       158 lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l  237 (521)
                      ||++||+||||||+||++.....++.+||+|||+|....                     +..++.++|||||||++|+|
T Consensus       133 lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~---------------------~~~~~~~~DiwslG~il~el  191 (299)
T 3m2w_A          133 LHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT---------------------GEKYDKSCDMWSLGVIMYIL  191 (299)
T ss_dssp             HHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECT---------------------TCGGGGHHHHHHHHHHHHHH
T ss_pred             HHhCCcccCCCCHHHEEEecCCCCCcEEEeccccccccc---------------------cccCCchhhHHHHHHHHHHH
Confidence            999999999999999999543337889999999986432                     24578899999999999999


Q ss_pred             HhCCCCCCCCCcHHHH----HHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCCC
Q 009980          238 LSGYPPFIAQSNRQKQ----QMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSA  307 (521)
Q Consensus       238 l~g~~pf~~~~~~~~~----~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~~  307 (521)
                      ++|.+||.+.......    ..+..+...++...+..+|+++++||.+||..||.+|||+.++++||||.+...
T Consensus       192 ~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~~~  265 (299)
T 3m2w_A          192 LCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTK  265 (299)
T ss_dssp             HHSSCSCCC-------CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTGGG
T ss_pred             HHCCCCCCCCcchhhhHHHHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhccccc
Confidence            9999999776544322    222334445556666789999999999999999999999999999999986543

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=100.00  E-value=8.7e-45  Score=350.82  Aligned_cols=257  Identities=26%  Similarity=0.451  Sum_probs=208.6

Q ss_pred             ccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHH
Q 009980            5 TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALL   84 (521)
Q Consensus         5 ~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (521)
                      +....++|++.+.||+|+||.||+|+++.  +++.||||++........                     .........+
T Consensus        14 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~--~~~~vaiK~~~~~~~~~~---------------------~~~~~~~~~~   70 (287)
T 4f0f_A           14 PTLADNEIEYEKQIGKGGFGLVHKGRLVK--DKSVVAIKSLILGDSEGE---------------------TEMIEKFQEF   70 (287)
T ss_dssp             CBCCSTTEEEEEECCCCSSSCEEEEEETT--TCCEEEEEECCCCTTTCC---------------------HHHHCCSHHH
T ss_pred             hhhhhccceehhccccCCceeEEEEEEcC--CceEEEEEEeeccccccc---------------------hhHHHHHHHH
Confidence            34567899999999999999999999987  788999999865332210                     0000111457


Q ss_pred             HHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC-
Q 009980           85 TNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQAN-  162 (521)
Q Consensus        85 ~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~~~-  162 (521)
                      .+|+.+++++     +||||+++++++.+..  ++||||+.||+|.+.+... ..+++..+..++.|++.||.|||++| 
T Consensus        71 ~~E~~~l~~l-----~h~~i~~~~~~~~~~~--~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~  143 (287)
T 4f0f_A           71 QREVFIMSNL-----NHPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNP  143 (287)
T ss_dssp             HHHHHHHTTC-----CCTTBCCEEEEETTTT--EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSS
T ss_pred             HHHHHHHHhC-----CCCCchhhheeecCCC--eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCC
Confidence            8999999998     9999999999997665  6999999999999888654 47999999999999999999999999 


Q ss_pred             -CeeccCCCCcEEEeeCCCCCC-----EEEeecCCCccCCCCCCcccccCCcccccccccc--cCCCCchhhhHHHHHHH
Q 009980          163 -IVHRDLKPENCLFLNDREDSP-----LKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALL--QDRITSKSDMWSLGVIL  234 (521)
Q Consensus       163 -i~H~dlkp~Nil~~~~~~~~~-----~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DiwslG~il  234 (521)
                       |+||||||+||++   +..+.     +||+|||+++....  ......||+.|+|||++.  ...++.++|||||||++
T Consensus       144 ~ivH~dikp~Nil~---~~~~~~~~~~~kl~Dfg~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l  218 (287)
T 4f0f_A          144 PIVHRDLRSPNIFL---QSLDENAPVCAKVADFGLSQQSVH--SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMIL  218 (287)
T ss_dssp             CCBCSCCSGGGEEE---SCCCTTCSCCEEECCCTTCBCCSS--CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHH
T ss_pred             CeecCCCCcceEEE---eccCCCCceeEEeCCCCccccccc--cccccCCCccccCchhhccCCCCcCchhhHHHHHHHH
Confidence             9999999999999   43333     99999999985432  344567999999999984  45678999999999999


Q ss_pred             HHHHhCCCCCCCCCcHHH--HHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          235 YILLSGYPPFIAQSNRQK--QQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       235 ~~ll~g~~pf~~~~~~~~--~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      |+|++|..||...+....  ...+.......  .....+|+.+.++|.+||..||.+|||+.++++
T Consensus       219 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  282 (287)
T 4f0f_A          219 YTILTGEGPFDEYSYGKIKFINMIREEGLRP--TIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVK  282 (287)
T ss_dssp             HHHHHSSCTTTTCCCCHHHHHHHHHHSCCCC--CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHcCCCCCccccccHHHHHHHHhccCCCC--CCCcccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            999999999987665444  33333333222  233568999999999999999999999999986

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=100.00  E-value=2.3e-45  Score=361.75  Aligned_cols=264  Identities=25%  Similarity=0.352  Sum_probs=218.0

Q ss_pred             ccccccceeecccccccCceEEEEeEEcc---CCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccH
Q 009980            5 TRKLTDEYEVTDILGRGGFSVVRRGIKKT---CGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSD   81 (521)
Q Consensus         5 ~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~---~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (521)
                      .+...++|++.+.||+|+||.||+|++..   ..+++.||||++.....                           ....
T Consensus        25 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---------------------------~~~~   77 (327)
T 2yfx_A           25 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS---------------------------EQDE   77 (327)
T ss_dssp             CBCCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCC---------------------------HHHH
T ss_pred             ccCChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccc---------------------------hhhH
Confidence            45567899999999999999999998431   12678899999853211                           1223


Q ss_pred             HHHHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC-------CCCHHHHHHHHHHHHHH
Q 009980           82 ALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE-------RYMEVGAAAVIRQIAEG  154 (521)
Q Consensus        82 ~~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-------~~~~~~~~~i~~qil~a  154 (521)
                      ..+.+|+.+++++     +||||+++++++......|+||||++|++|.+++....       .+++..+..++.||+.|
T Consensus        78 ~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~a  152 (327)
T 2yfx_A           78 LDFLMEALIISKF-----NHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG  152 (327)
T ss_dssp             HHHHHHHHHHHHC-----CCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhC-----CCCCCCeEEEEEcCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHH
Confidence            4578899999998     99999999999999999999999999999999998753       48999999999999999


Q ss_pred             HHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCC---CCcccccCCcccccccccccCCCCchhhhHHHH
Q 009980          155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYT---DPVVGLFGSIDYVSPEALLQDRITSKSDMWSLG  231 (521)
Q Consensus       155 l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG  231 (521)
                      |.|||++||+||||||+||++..++....+||+|||++......   .......||+.|+|||++.+..++.++||||||
T Consensus       153 l~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  232 (327)
T 2yfx_A          153 CQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFG  232 (327)
T ss_dssp             HHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHH
T ss_pred             HHHHhhCCeecCcCCHhHEEEecCCCcceEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHH
Confidence            99999999999999999999954445667999999998643211   122344689999999999988999999999999


Q ss_pred             HHHHHHHh-CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCccc
Q 009980          232 VILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVI  303 (521)
Q Consensus       232 ~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~  303 (521)
                      +++|+|++ |.+||.+.+..+....+..+.....   ...+++.+.++|.+||..||.+|||+.++++|+|..
T Consensus       233 ~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~  302 (327)
T 2yfx_A          233 VLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP---PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC  302 (327)
T ss_dssp             HHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHcCCCCCCCCcCHHHHHHHHhcCCCCCC---CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence            99999998 9999999888888887777654322   256899999999999999999999999999998864

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=100.00  E-value=1.1e-44  Score=350.91  Aligned_cols=255  Identities=23%  Similarity=0.338  Sum_probs=214.4

Q ss_pred             cccccceeecc-cccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHH
Q 009980            6 RKLTDEYEVTD-ILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALL   84 (521)
Q Consensus         6 ~~~~~~Y~~~~-~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (521)
                      ..-.++|++.+ .||+|+||.||+|.+....+++.||||++......                          ......+
T Consensus        12 ~~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~--------------------------~~~~~~~   65 (291)
T 1xbb_A           12 YLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAND--------------------------PALKDEL   65 (291)
T ss_dssp             BCCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-------------------------------CHHHHHH
T ss_pred             eecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccC--------------------------HHHHHHH
Confidence            34457899998 99999999999997654447889999998653211                          1224568


Q ss_pred             HHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 009980           85 TNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIV  164 (521)
Q Consensus        85 ~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~  164 (521)
                      .+|+.+++++     +||||+++++++ ..+..|+||||+.|++|.+++...+.+++..+..++.||+.||.|||++||+
T Consensus        66 ~~e~~~l~~l-----~h~~i~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~  139 (291)
T 1xbb_A           66 LAEANVMQQL-----DNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFV  139 (291)
T ss_dssp             HHHHHHHHTC-----CCTTBCCEEEEE-ESSSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHhC-----CCCCEEEEEEEE-CCCCcEEEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhCCeE
Confidence            8999999998     999999999999 5677899999999999999999988899999999999999999999999999


Q ss_pred             eccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC----cccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-
Q 009980          165 HRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP----VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-  239 (521)
Q Consensus       165 H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-  239 (521)
                      ||||||+||++   +.++.+||+|||++........    .....||+.|+|||++.+..++.++||||||+++|+|++ 
T Consensus       140 H~dikp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~  216 (291)
T 1xbb_A          140 HRDLAARNVLL---VTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSY  216 (291)
T ss_dssp             CSCCSGGGEEE---EETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTT
T ss_pred             cCCCCcceEEE---eCCCcEEEccCCcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhc
Confidence            99999999999   5567899999999976543322    122346788999999998889999999999999999999 


Q ss_pred             CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          240 GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       240 g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      |..||.+.+..+....+..+.....   ...+|+.+.++|.+||..||.+|||+.++++
T Consensus       217 g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  272 (291)
T 1xbb_A          217 GQKPYRGMKGSEVTAMLEKGERMGC---PAGCPREMYDLMNLCWTYDVENRPGFAAVEL  272 (291)
T ss_dssp             TCCSSTTCCHHHHHHHHHTTCCCCC---CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHcCCCCCC---CCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            9999999888888777777653322   2568999999999999999999999999986

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=6.6e-45  Score=361.11  Aligned_cols=260  Identities=24%  Similarity=0.357  Sum_probs=214.9

Q ss_pred             cccccceeecccccccCceEEEEeEEcc---CCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKT---CGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDA   82 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~---~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (521)
                      +.-.++|++.+.||+|+||.||+|.+..   .+++..||||++......                           ....
T Consensus        41 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~---------------------------~~~~   93 (344)
T 1rjb_A           41 EFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADS---------------------------SERE   93 (344)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC---------------------------------CH
T ss_pred             ccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCH---------------------------HHHH
Confidence            3345799999999999999999999732   236778999999643211                           1234


Q ss_pred             HHHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC-----------------------CC
Q 009980           83 LLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE-----------------------RY  139 (521)
Q Consensus        83 ~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-----------------------~~  139 (521)
                      .+.+|+.+++++    .+||||+++++++...+..|+||||++||+|.+++....                       .+
T Consensus        94 ~~~~E~~~l~~l----~~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  169 (344)
T 1rjb_A           94 ALMSELKMMTQL----GSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVL  169 (344)
T ss_dssp             HHHHHHHHHHHH----CCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------C
T ss_pred             HHHHHHHHHHhh----cCCCCeeeEEEEEeeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccC
Confidence            588999999988    479999999999999999999999999999999997653                       27


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC---cccccCCccccccccc
Q 009980          140 MEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEAL  216 (521)
Q Consensus       140 ~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~  216 (521)
                      ++..+..++.||+.||.|||++||+||||||+||++   +.++.+||+|||++........   .....||+.|+|||++
T Consensus       170 ~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~  246 (344)
T 1rjb_A          170 TFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLV---THGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESL  246 (344)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEE---ETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEE---cCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHh
Confidence            899999999999999999999999999999999999   6778899999999976533222   2234578899999999


Q ss_pred             ccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHH
Q 009980          217 LQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQE  295 (521)
Q Consensus       217 ~~~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~  295 (521)
                      .+..++.++|||||||++|+|++ |..||.+.........+.........  ...+++++.+||.+||..||.+|||+.+
T Consensus       247 ~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~  324 (344)
T 1rjb_A          247 FEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQ--PFYATEEIYIIMQSCWAFDSRKRPSFPN  324 (344)
T ss_dssp             HHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             ccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHHHHHHHhcCCCCCC--CCCCCHHHHHHHHHHcCCCchhCcCHHH
Confidence            98899999999999999999998 99999887766555555444433322  2458999999999999999999999999


Q ss_pred             HHcCCc
Q 009980          296 LLNHPW  301 (521)
Q Consensus       296 ~l~h~~  301 (521)
                      +++|..
T Consensus       325 l~~~l~  330 (344)
T 1rjb_A          325 LTSFLG  330 (344)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            998654

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=100.00  E-value=1.9e-45  Score=371.74  Aligned_cols=260  Identities=24%  Similarity=0.418  Sum_probs=213.5

Q ss_pred             ccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHH
Q 009980            5 TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALL   84 (521)
Q Consensus         5 ~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (521)
                      ...+.++|++.+.||+|+||.||+|+++.  +++.||||++......                           .....+
T Consensus         4 ~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~--~~~~vaiK~~~~~~~~---------------------------~~~~~~   54 (396)
T 4eut_A            4 QSTSNHLWLLSDILGQGATANVFRGRHKK--TGDLFAIKVFNNISFL---------------------------RPVDVQ   54 (396)
T ss_dssp             EECSSEEEEEEEEEEECSSEEEEEEEETT--TCCEEEEEEECGGGGG---------------------------SCHHHH
T ss_pred             CCCCCCceEEEEEEEcCCCeEEEEEEECC--CCcEEEEEEecccccc---------------------------chHHHH
Confidence            44678899999999999999999999988  7889999999653221                           123457


Q ss_pred             HHHHHHHHHHhhccCCCCCccceeEEEEeCC--eEEEEEeccCCCchHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHH
Q 009980           85 TNEILVMRKIVENVSPHPNVIDLYDVYEDQN--GVHLILELCSGGELFDRIVAQER---YMEVGAAAVIRQIAEGLAALH  159 (521)
Q Consensus        85 ~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~--~~~lv~e~~~gg~L~~~l~~~~~---~~~~~~~~i~~qil~al~~lH  159 (521)
                      .+|+.+++++     +||||+++++++...+  ..|+|||||.||+|.+++.....   +++..++.++.||+.||.|||
T Consensus        55 ~~E~~~l~~l-----~hpnIv~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH  129 (396)
T 4eut_A           55 MREFEVLKKL-----NHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR  129 (396)
T ss_dssp             HHHHHHHHHC-----CCTTBCCEEEEEECTTTCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhc-----CCCCCCeEEEeeccCCCCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH
Confidence            7899999999     9999999999998765  78999999999999999876433   999999999999999999999


Q ss_pred             HCCCeeccCCCCcEEEee-CCCCCCEEEeecCCCccCCCCCCcccccCCccccccccccc--------CCCCchhhhHHH
Q 009980          160 QANIVHRDLKPENCLFLN-DREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQ--------DRITSKSDMWSL  230 (521)
Q Consensus       160 ~~~i~H~dlkp~Nil~~~-~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~Diwsl  230 (521)
                      ++||+||||||+|||+.. ++..+.+||+|||+|+...........+||+.|+|||++.+        ..++.++|||||
T Consensus       130 ~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSl  209 (396)
T 4eut_A          130 ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSI  209 (396)
T ss_dssp             HTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHH
T ss_pred             HCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHH
Confidence            999999999999999743 34556799999999987665555556679999999999865        567889999999


Q ss_pred             HHHHHHHHhCCCCCCCC----CcHHHHHHHHcCCCCC---------------------chhhhhccCHHHHHHHHHhccC
Q 009980          231 GVILYILLSGYPPFIAQ----SNRQKQQMIMAGEFSF---------------------YEQTWKNISSSAKQLISSLLTV  285 (521)
Q Consensus       231 G~il~~ll~g~~pf~~~----~~~~~~~~i~~~~~~~---------------------~~~~~~~~s~~~~~li~~~l~~  285 (521)
                      ||++|+|++|..||...    ...+....+..+....                     .......+++.+.++|.+||..
T Consensus       210 G~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~  289 (396)
T 4eut_A          210 GVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEA  289 (396)
T ss_dssp             HHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCC
T ss_pred             HHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhcc
Confidence            99999999999999643    3345555555544321                     1111234667889999999999


Q ss_pred             CCCCCCCHHHHHc
Q 009980          286 DPNRRPSAQELLN  298 (521)
Q Consensus       286 dp~~R~t~~~~l~  298 (521)
                      ||.+|||+.++++
T Consensus       290 dP~~R~s~~e~l~  302 (396)
T 4eut_A          290 DQEKCWGFDQFFA  302 (396)
T ss_dssp             CTTTSCCHHHHHH
T ss_pred             ChhhhccHHHHHH
Confidence            9999999999865

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=100.00  E-value=8.2e-45  Score=371.12  Aligned_cols=260  Identities=31%  Similarity=0.433  Sum_probs=202.6

Q ss_pred             cccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHH
Q 009980            4 ETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDAL   83 (521)
Q Consensus         4 ~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (521)
                      -...+.+.|.+.+.||+|+||+||.+.. .  +++.||||++...                               ....
T Consensus         9 ~~~~l~~~~~~~~~LG~G~~g~V~~~~~-~--~g~~vAvK~~~~~-------------------------------~~~~   54 (434)
T 2rio_A            9 FEQSLKNLVVSEKILGYGSSGTVVFQGS-F--QGRPVAVKRMLID-------------------------------FCDI   54 (434)
T ss_dssp             CSCSCSSCEEEEEEEEECSTTCEEEEEE-S--SSSEEEEEEEEGG-------------------------------GHHH
T ss_pred             hhhhhhheeeccCeEeeCCCeEEEEEEE-E--CCeEEEEEEEcHH-------------------------------HHHH
Confidence            3456778888899999999999987543 3  6889999998541                               1234


Q ss_pred             HHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCC-------HHHHHHHHHHHHHHHH
Q 009980           84 LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYM-------EVGAAAVIRQIAEGLA  156 (521)
Q Consensus        84 ~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~-------~~~~~~i~~qil~al~  156 (521)
                      +.+|+.+++++    .+||||+++++++.+++.+|+|||||. |+|.+++.......       +..+..++.||+.||.
T Consensus        55 ~~~E~~~l~~l----~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~  129 (434)
T 2rio_A           55 ALMEIKLLTES----DDHPNVIRYYCSETTDRFLYIALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVA  129 (434)
T ss_dssp             HHHHHHHHHHH----TTSTTBCCEEEEEECSSEEEEEECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhc----cCCCCcCeEEEEEecCCeEEEEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHH
Confidence            67899999876    389999999999999999999999996 59999998754332       3345789999999999


Q ss_pred             HHHHCCCeeccCCCCcEEEeeC----------CCCCCEEEeecCCCccCCCCCC-----cccccCCccccccccccc---
Q 009980          157 ALHQANIVHRDLKPENCLFLND----------REDSPLKIMDFGLSSVEGYTDP-----VVGLFGSIDYVSPEALLQ---  218 (521)
Q Consensus       157 ~lH~~~i~H~dlkp~Nil~~~~----------~~~~~~kl~Dfg~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~---  218 (521)
                      |||++||+||||||+|||+..+          +....+||+|||+|+.......     ....+||+.|+|||++.+   
T Consensus       130 ~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  209 (434)
T 2rio_A          130 HLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNN  209 (434)
T ss_dssp             HHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCT
T ss_pred             HHHHCCccccCCChHhEEEecCcccccccccCCCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccc
Confidence            9999999999999999999543          2345799999999986543321     234579999999999975   


Q ss_pred             ----CCCCchhhhHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHcCCCCCchh---hhhccCHHHHHHHHHhccCCCCCC
Q 009980          219 ----DRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQ---TWKNISSSAKQLISSLLTVDPNRR  290 (521)
Q Consensus       219 ----~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~---~~~~~s~~~~~li~~~l~~dp~~R  290 (521)
                          ..++.++|||||||++|+|++ |.+||.+....+  ..+..+....+..   ....+++++++||.+||..||.+|
T Consensus       210 ~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  287 (434)
T 2rio_A          210 LQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE--SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKR  287 (434)
T ss_dssp             TSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH--HHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGS
T ss_pred             cccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH--HHHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhC
Confidence                568999999999999999999 999997665443  3444544433221   123467899999999999999999


Q ss_pred             CCHHHHHcCCcccC
Q 009980          291 PSAQELLNHPWVIG  304 (521)
Q Consensus       291 ~t~~~~l~h~~~~~  304 (521)
                      ||+.++++||||..
T Consensus       288 ps~~eil~hp~f~~  301 (434)
T 2rio_A          288 PTAMKVLRHPLFWP  301 (434)
T ss_dssp             CCHHHHHTSGGGSC
T ss_pred             CCHHHHHhCCccCC
Confidence            99999999999974

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=100.00  E-value=6.2e-45  Score=364.03  Aligned_cols=257  Identities=17%  Similarity=0.214  Sum_probs=199.0

Q ss_pred             cccceeecccccccCceEEEEeEEccCC---CcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCG---ETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALL   84 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (521)
                      ..++|++.+.||+|+||.||+|.++..+   .++.||||++....                                ..+
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--------------------------------~~~   80 (364)
T 3op5_A           33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDN--------------------------------GPL   80 (364)
T ss_dssp             TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTC--------------------------------HHH
T ss_pred             CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccc--------------------------------hhH
Confidence            3459999999999999999999987632   35789999986421                                123


Q ss_pred             HHHHHHHHHHhh----------ccCCCCCccceeEEEEeC----CeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHH
Q 009980           85 TNEILVMRKIVE----------NVSPHPNVIDLYDVYEDQ----NGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIR  149 (521)
Q Consensus        85 ~~E~~~l~~l~~----------~~~~hpniv~~~~~~~~~----~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~  149 (521)
                      .+|+.+++++..          ....||||+++++++...    ...||||||| |++|.+++... +.+++..+..++.
T Consensus        81 ~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~  159 (364)
T 3op5_A           81 FTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSL  159 (364)
T ss_dssp             HHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHH
T ss_pred             HHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHH
Confidence            444444444311          223799999999998765    5689999999 99999999876 6799999999999


Q ss_pred             HHHHHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC--------CcccccCCcccccccccccCCC
Q 009980          150 QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD--------PVVGLFGSIDYVSPEALLQDRI  221 (521)
Q Consensus       150 qil~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~  221 (521)
                      ||+.||.|||++||+||||||+|||+.. ..++.+||+|||+|+......        .....+||+.|+|||++.+..+
T Consensus       160 qi~~~l~~lH~~~iiHrDlkp~Nill~~-~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  238 (364)
T 3op5_A          160 RILDILEYIHEHEYVHGDIKASNLLLNY-KNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAP  238 (364)
T ss_dssp             HHHHHHHHHHHTTEECCCCCGGGEEEES-SCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCC
T ss_pred             HHHHHHHHHHHCCeEEecCCHHHEEEec-CCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCC
Confidence            9999999999999999999999999942 267889999999997543221        1233459999999999999999


Q ss_pred             CchhhhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHcCCC-----CCchhhh--hccCHHHHHHHHHhccCCCCCCCCHH
Q 009980          222 TSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEF-----SFYEQTW--KNISSSAKQLISSLLTVDPNRRPSAQ  294 (521)
Q Consensus       222 ~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~-----~~~~~~~--~~~s~~~~~li~~~l~~dp~~R~t~~  294 (521)
                      +.++|||||||++|+|++|..||.+...............     ......+  ..+|+++.+++..||..||.+|||+.
T Consensus       239 ~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~  318 (364)
T 3op5_A          239 SRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYE  318 (364)
T ss_dssp             CHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHH
T ss_pred             CchhhHHHHHHHHHHHHhCCCCccccccCHHHHHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHH
Confidence            9999999999999999999999986433322221111110     0011111  46799999999999999999999999


Q ss_pred             HHHc
Q 009980          295 ELLN  298 (521)
Q Consensus       295 ~~l~  298 (521)
                      ++++
T Consensus       319 ~l~~  322 (364)
T 3op5_A          319 NLRD  322 (364)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9885

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=100.00  E-value=2.6e-45  Score=353.77  Aligned_cols=251  Identities=24%  Similarity=0.411  Sum_probs=214.2

Q ss_pred             ccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHH
Q 009980            5 TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALL   84 (521)
Q Consensus         5 ~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (521)
                      ...+.++|++.+.||+|+||.||+|+++.  +++.||||++....                                ..+
T Consensus         6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~--~~~~vavK~~~~~~--------------------------------~~~   51 (284)
T 2a19_B            6 DKRFGMDFKEIELIGSGGFGQVFKAKHRI--DGKTYVIKRVKYNN--------------------------------EKA   51 (284)
T ss_dssp             CHHHHHHEEEEEEEECSSSCCEEEEEETT--TCCEEEEEEEECCS--------------------------------GGG
T ss_pred             cchhccccceeeeeccCCceEEEEEEEcC--CCeEEEEEEecccc--------------------------------HHH
Confidence            34577899999999999999999999987  78899999986421                                236


Q ss_pred             HHHHHHHHHHhhccCCCCCccceeEEEEe----------------CCeEEEEEeccCCCchHHHHHhc--CCCCHHHHHH
Q 009980           85 TNEILVMRKIVENVSPHPNVIDLYDVYED----------------QNGVHLILELCSGGELFDRIVAQ--ERYMEVGAAA  146 (521)
Q Consensus        85 ~~E~~~l~~l~~~~~~hpniv~~~~~~~~----------------~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~  146 (521)
                      .+|+.+++++     +||||+++++++..                ...+|+||||++|++|.+++...  ..+++..+..
T Consensus        52 ~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~  126 (284)
T 2a19_B           52 EREVKALAKL-----DHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALE  126 (284)
T ss_dssp             HHHHHHHHHC-----CCTTBCCEEEEEEEEEEC---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHH
T ss_pred             HHHHHHHHhC-----CCCCEEEEeeeEeccccCcccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHH
Confidence            7899999998     99999999999865                45689999999999999999754  5799999999


Q ss_pred             HHHHHHHHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhh
Q 009980          147 VIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSD  226 (521)
Q Consensus       147 i~~qil~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D  226 (521)
                      ++.||+.||.|||++||+||||||+||++   +.++.+||+|||++.............||+.|+|||++.+..++.++|
T Consensus       127 i~~qi~~~l~~lH~~~i~H~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  203 (284)
T 2a19_B          127 LFEQITKGVDYIHSKKLINRDLKPSNIFL---VDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVD  203 (284)
T ss_dssp             HHHHHHHHHHHHHHTTEECSCCSGGGEEE---EETTEEEECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHH
T ss_pred             HHHHHHHHHHHHHhCCeeeccCCHHHEEE---cCCCCEEECcchhheeccccccccccCCcccccChhhhccCCCcchhh
Confidence            99999999999999999999999999999   566789999999998765544455567999999999999989999999


Q ss_pred             hHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCC
Q 009980          227 MWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGD  305 (521)
Q Consensus       227 iwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~  305 (521)
                      |||||+++|+|++|..||...  ......+..+..+      ..+++.++++|.+||..||.+|||+.++++|+|....
T Consensus       204 i~slG~il~~l~~~~~~~~~~--~~~~~~~~~~~~~------~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~  274 (284)
T 2a19_B          204 LYALGLILAELLHVCDTAFET--SKFFTDLRDGIIS------DIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKK  274 (284)
T ss_dssp             HHHHHHHHHHHHSCCSSHHHH--HHHHHHHHTTCCC------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC
T ss_pred             hHHHHHHHHHHHhcCCcchhH--HHHHHHhhccccc------ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhh
Confidence            999999999999999988532  2333334433322      4578999999999999999999999999999887543

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=100.00  E-value=1.8e-45  Score=369.47  Aligned_cols=251  Identities=26%  Similarity=0.418  Sum_probs=213.8

Q ss_pred             cccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      -.++|++.+.||+|+||.||+|+++.  +++.||||+++....                           ......+.+|
T Consensus       112 ~~~~~~~~~~lG~G~~g~V~~~~~~~--~~~~vavK~~~~~~~---------------------------~~~~~~~~~E  162 (377)
T 3cbl_A          112 NHEDLVLGEQIGRGNFGEVFSGRLRA--DNTLVAVKSCRETLP---------------------------PDLKAKFLQE  162 (377)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETT--TCCEEEEEECCTTSC---------------------------HHHHTTTTHH
T ss_pred             chHHeEEeeEeccCCCCeEEEEEEec--CCeEEEEEEccccCC---------------------------HHHHHHHHHH
Confidence            35789999999999999999999987  788999999864211                           0112346789


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE-RYMEVGAAAVIRQIAEGLAALHQANIVHR  166 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qil~al~~lH~~~i~H~  166 (521)
                      +.+++++     +||||+++++++..++.+|+||||++||+|.+++...+ .+++..+..++.||+.||.|||++||+||
T Consensus       163 ~~~l~~l-----~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHr  237 (377)
T 3cbl_A          163 ARILKQY-----SHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHR  237 (377)
T ss_dssp             HHHHTTC-----CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred             HHHHHhC-----CCCCEEEEEEEEecCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCc
Confidence            9999988     99999999999999999999999999999999997654 69999999999999999999999999999


Q ss_pred             cCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC---cccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CCC
Q 009980          167 DLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYP  242 (521)
Q Consensus       167 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~  242 (521)
                      ||||+|||+   +.++.+||+|||+|+.......   .....+++.|+|||++.+..++.++|||||||++|+|++ |..
T Consensus       238 Dlkp~Nil~---~~~~~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~  314 (377)
T 3cbl_A          238 DLAARNCLV---TEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGAS  314 (377)
T ss_dssp             CCSGGGEEE---CTTCCEEECCGGGCEECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCC
T ss_pred             ccCHHHEEE---cCCCcEEECcCCCceecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            999999999   7788999999999976432211   111235778999999998899999999999999999998 999


Q ss_pred             CCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          243 PFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       243 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      ||.+.+..+....+..+.....   ...+|+.+.+|+.+||..||.+|||+.++++
T Consensus       315 p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  367 (377)
T 3cbl_A          315 PYPNLSNQQTREFVEKGGRLPC---PELCPDAVFRLMEQCWAYEPGQRPSFSTIYQ  367 (377)
T ss_dssp             SSTTSCHHHHHHHHHTTCCCCC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCCCHHHHHHHHHcCCCCCC---CCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence            9999888887777766543221   2558999999999999999999999999985

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=100.00  E-value=4.6e-45  Score=359.60  Aligned_cols=252  Identities=25%  Similarity=0.353  Sum_probs=211.4

Q ss_pred             ccceeecccccccCceEEEEeEEccCCCcce--EEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCGETNQ--VAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~--vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      .++|++.+.||+|+||.||+|+++.  ++..  +|||.+......                           .....+.+
T Consensus        24 ~~~y~~~~~lg~G~~g~Vy~~~~~~--~~~~~~v~iK~~~~~~~~---------------------------~~~~~~~~   74 (327)
T 1fvr_A           24 WNDIKFQDVIGEGNFGQVLKARIKK--DGLRMDAAIKRMKEYASK---------------------------DDHRDFAG   74 (327)
T ss_dssp             GGGCEEEEEEECGGGCEEEEEEEEE--TTEEEEEEEEEEECC---------------------------------CHHHH
T ss_pred             HHHccceeeeecCCCceEEEEEEcc--CCcccceeeeeeccccch---------------------------HHHHHHHH
Confidence            4799999999999999999999987  5554  599998642211                           11234778


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC----------------CCCHHHHHHHHHH
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE----------------RYMEVGAAAVIRQ  150 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~----------------~~~~~~~~~i~~q  150 (521)
                      |+.+++++    .+||||+++++++.+.+..|+||||++|++|.+++...+                .+++..++.++.|
T Consensus        75 E~~~l~~l----~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~q  150 (327)
T 1fvr_A           75 ELEVLCKL----GHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD  150 (327)
T ss_dssp             HHHHHTTC----CCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHH
T ss_pred             HHHHHHhc----cCCCchhhhceeeeeCCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHH
Confidence            99888776    489999999999999999999999999999999997654                6999999999999


Q ss_pred             HHHHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHH
Q 009980          151 IAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSL  230 (521)
Q Consensus       151 il~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl  230 (521)
                      |+.||.|||++||+||||||+||++   +.++.+||+|||+++............+|+.|+|||++.+..++.++|||||
T Consensus       151 i~~aL~~LH~~~ivH~dlkp~NIl~---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl  227 (327)
T 1fvr_A          151 VARGMDYLSQKQFIHRDLAARNILV---GENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSY  227 (327)
T ss_dssp             HHHHHHHHHHTTEECSCCSGGGEEE---CGGGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHH
T ss_pred             HHHHHHHHHhCCccCCCCccceEEE---cCCCeEEEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHH
Confidence            9999999999999999999999999   6778999999999975443333344467889999999998889999999999


Q ss_pred             HHHHHHHHh-CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          231 GVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       231 G~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      ||++|+|++ |.+||.+.+..+....+..+...   .....+++.+.+||.+||..||.+|||+.+++++
T Consensus       228 G~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  294 (327)
T 1fvr_A          228 GVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRL---EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  294 (327)
T ss_dssp             HHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCCC---CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHcCCCCCCCCCcHHHHHHHhhcCCCC---CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            999999998 99999998888777776655322   1225689999999999999999999999999975

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=100.00  E-value=1.8e-44  Score=350.12  Aligned_cols=256  Identities=21%  Similarity=0.238  Sum_probs=203.2

Q ss_pred             ccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHH
Q 009980            5 TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALL   84 (521)
Q Consensus         5 ~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (521)
                      ...+.++|++.+.||+|+||.||+|++..  +++.||||++.....                              ...+
T Consensus         4 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~--~~~~vavK~~~~~~~------------------------------~~~~   51 (296)
T 4hgt_A            4 ELRVGNRYRLGRKIGSGSFGDIYLGTDIA--AGEEVAIKLECVKTK------------------------------HPQL   51 (296)
T ss_dssp             -------CEEEEEEEECSSSEEEEEEETT--TTEEEEEEEEEC---------------------------------CCCH
T ss_pred             ccccCCceEEeeeecCCCCeEEEEEEEcC--CCceEEEEeeccccc------------------------------chHH
Confidence            45678999999999999999999999987  788999998754321                              1237


Q ss_pred             HHHHHHHHHHhhccCCCCCccceeE-EEEeCCeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 009980           85 TNEILVMRKIVENVSPHPNVIDLYD-VYEDQNGVHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQAN  162 (521)
Q Consensus        85 ~~E~~~l~~l~~~~~~hpniv~~~~-~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~al~~lH~~~  162 (521)
                      .+|+.+++.+     .|++++..+. ++...+..++||||+ |++|.+++.. ...+++..+..++.||+.||.|||++|
T Consensus        52 ~~e~~~l~~l-----~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~  125 (296)
T 4hgt_A           52 HIESKIYKMM-----QGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKN  125 (296)
T ss_dssp             HHHHHHHHHH-----TTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHh-----cCCCCCCeeeeecCCCCceEEEEEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            8899999998     6666555554 457788999999999 9999999874 467999999999999999999999999


Q ss_pred             CeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC--------CcccccCCcccccccccccCCCCchhhhHHHHHHH
Q 009980          163 IVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD--------PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVIL  234 (521)
Q Consensus       163 i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il  234 (521)
                      |+||||||+|||+..++.++.+||+|||+++......        ......||+.|+|||++.+..++.++||||+||++
T Consensus       126 ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il  205 (296)
T 4hgt_A          126 FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVL  205 (296)
T ss_dssp             EECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHH
T ss_pred             eecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHH
Confidence            9999999999999554567889999999997643322        12345799999999999999999999999999999


Q ss_pred             HHHHhCCCCCCCCCcH---HHHHHHHcCCCCCc-hhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          235 YILLSGYPPFIAQSNR---QKQQMIMAGEFSFY-EQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       235 ~~ll~g~~pf~~~~~~---~~~~~i~~~~~~~~-~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      |+|++|+.||.+.+..   .....+.......+ ......+|+++.++|.+||+.||.+|||+.++++
T Consensus       206 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~  273 (296)
T 4hgt_A          206 MYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             HHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred             HHHhcCCCCCcccchhhhhhhhhhhhcccccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHH
Confidence            9999999999775432   23333333322222 2233668999999999999999999999999986

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=100.00  E-value=3.2e-45  Score=360.37  Aligned_cols=251  Identities=23%  Similarity=0.354  Sum_probs=208.6

Q ss_pred             cccceeecccccccCceEEEEeEEccCCCcce----EEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQ----VAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDAL   83 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~----vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (521)
                      -.++|++.+.||+|+||.||+|++..  +++.    ||+|.+.......                           ....
T Consensus        11 ~~~~y~~~~~lG~G~~g~Vy~~~~~~--~~~~~~~kv~~K~~~~~~~~~---------------------------~~~~   61 (325)
T 3kex_A           11 KETELRKLKVLGSGVFGTVHKGVWIP--EGESIKIPVCIKVIEDKSGRQ---------------------------SFQA   61 (325)
T ss_dssp             CTTTEEEEEEEECCSSCEEEEEEECC--TTCSCCEEEEEEEECCTTSCS---------------------------CBCS
T ss_pred             CHhHceeeeeeeecCCceEEEEEEcC--CCceEEEEEEEEeccccccHH---------------------------HHHH
Confidence            35789999999999999999999987  5555    6777664322111                           1122


Q ss_pred             HHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Q 009980           84 LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQAN  162 (521)
Q Consensus        84 ~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~~~  162 (521)
                      +.+|+.+++++     +||||+++++++. .+..++||||+.||+|.+++... +.+++..+..++.||+.||.|||++|
T Consensus        62 ~~~e~~~l~~l-----~h~~iv~~~~~~~-~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  135 (325)
T 3kex_A           62 VTDHMLAIGSL-----DHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG  135 (325)
T ss_dssp             CCHHHHHHHTC-----CCTTBCCEEEEEC-BSSEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHhcC-----CCCCcCeEEEEEc-CCccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            56788888888     9999999999886 45689999999999999999764 57999999999999999999999999


Q ss_pred             CeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC---CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh
Q 009980          163 IVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD---PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS  239 (521)
Q Consensus       163 i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~  239 (521)
                      |+||||||+|||+   +.++.+||+|||+|+......   ......||+.|+|||++.+..++.++|||||||++|+|++
T Consensus       136 ivH~Dikp~Nil~---~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~  212 (325)
T 3kex_A          136 MVHRNLAARNVLL---KSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT  212 (325)
T ss_dssp             CCCSCCSSTTEEE---SSSSCEEECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred             CCCCccchheEEE---CCCCeEEECCCCcccccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHh
Confidence            9999999999999   778899999999998654332   2234567889999999998999999999999999999999


Q ss_pred             -CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          240 -GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       240 -g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                       |..||.+....+....+..+......   ..+++++.+++.+||..||.+|||+.++++|
T Consensus       213 ~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~dp~~Rps~~el~~~  270 (325)
T 3kex_A          213 FGAEPYAGLRLAEVPDLLEKGERLAQP---QICTIDVYMVMVKCWMIDENIRPTFKELANE  270 (325)
T ss_dssp             TSCCTTTTSCTTHHHHHHHTTCBCCCC---TTBCTTTTHHHHHHTCSCTTTSCCHHHHHHH
T ss_pred             CCCCCccccCHHHHHHHHHcCCCCCCC---CcCcHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence             99999998888888777776433322   3478899999999999999999999999985

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=100.00  E-value=5.8e-45  Score=358.09  Aligned_cols=259  Identities=28%  Similarity=0.380  Sum_probs=219.8

Q ss_pred             ccccccccceeecccccccCceEEEEeEEcc---CCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccc
Q 009980            3 QETRKLTDEYEVTDILGRGGFSVVRRGIKKT---CGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSV   79 (521)
Q Consensus         3 ~~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~---~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (521)
                      .+.+...++|++.+.||+|+||.||+|+++.   ..+++.||||++.....                           ..
T Consensus        18 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~---------------------------~~   70 (322)
T 1p4o_A           18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS---------------------------MR   70 (322)
T ss_dssp             CTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSC---------------------------HH
T ss_pred             hhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccC---------------------------HH
Confidence            3456677899999999999999999998762   12567899999864211                           12


Q ss_pred             cHHHHHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc----------CCCCHHHHHHHHH
Q 009980           80 SDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ----------ERYMEVGAAAVIR  149 (521)
Q Consensus        80 ~~~~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~----------~~~~~~~~~~i~~  149 (521)
                      ....+.+|+.+++++     +||||+++++++.+.+..|+||||+.||+|.+++...          ..+++..+..++.
T Consensus        71 ~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~  145 (322)
T 1p4o_A           71 ERIEFLNEASVMKEF-----NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAG  145 (322)
T ss_dssp             HHHHHHHHHHHGGGC-----CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhc-----CCCCEeeeEEEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHH
Confidence            234578899999888     9999999999999999999999999999999998753          4579999999999


Q ss_pred             HHHHHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC---cccccCCcccccccccccCCCCchhh
Q 009980          150 QIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALLQDRITSKSD  226 (521)
Q Consensus       150 qil~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~D  226 (521)
                      ||+.||.|||++||+||||||+||++   +.++.+||+|||+++.......   .....||+.|+|||++.+..++.++|
T Consensus       146 qi~~~l~~lH~~~i~H~dikp~NIli---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  222 (322)
T 1p4o_A          146 EIADGMAYLNANKFVHRDLAARNCMV---AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSD  222 (322)
T ss_dssp             HHHHHHHHHHHTTCBCSCCSGGGEEE---CTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHHHCCCccCCCccceEEE---cCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhh
Confidence            99999999999999999999999999   7788999999999976433221   22345788999999999889999999


Q ss_pred             hHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          227 MWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       227 iwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      |||||+++|+|++ |.+||.+.+..+....+..+.....   ...+++.+.++|.+||..||.+|||+.++++|
T Consensus       223 i~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~  293 (322)
T 1p4o_A          223 VWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDK---PDNCPDMLFELMRMCWQYNPKMRPSFLEIISS  293 (322)
T ss_dssp             HHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTCCCCC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCccccCCHHHHHHHHHcCCcCCC---CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            9999999999999 8999999888888888777654322   25689999999999999999999999999986

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=100.00  E-value=7.8e-45  Score=355.62  Aligned_cols=258  Identities=22%  Similarity=0.340  Sum_probs=214.5

Q ss_pred             cccccceeecccccccCceEEEEeEEc---cCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKK---TCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDA   82 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~---~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (521)
                      +...++|++.+.||+|+||.||+|.+.   ...+++.||||++.....                           .....
T Consensus        19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~---------------------------~~~~~   71 (313)
T 1t46_A           19 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH---------------------------LTERE   71 (313)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC---------------------------HHHHH
T ss_pred             ccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchh---------------------------HHHHH
Confidence            445689999999999999999999862   122678999999864211                           12245


Q ss_pred             HHHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC------------------CCCHHHH
Q 009980           83 LLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE------------------RYMEVGA  144 (521)
Q Consensus        83 ~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~------------------~~~~~~~  144 (521)
                      .+.+|+.+++++    .+||||+++++++.+++..|+||||++||+|.+++....                  .+++..+
T Consensus        72 ~~~~E~~~l~~l----~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (313)
T 1t46_A           72 ALMSELKVLSYL----GNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL  147 (313)
T ss_dssp             HHHHHHHHHHHH----CCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHH
T ss_pred             HHHHHHHHHhhc----ccCCCeeeEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHH
Confidence            688999999988    589999999999999999999999999999999998654                  4899999


Q ss_pred             HHHHHHHHHHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC---cccccCCcccccccccccCCC
Q 009980          145 AAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALLQDRI  221 (521)
Q Consensus       145 ~~i~~qil~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~  221 (521)
                      ..++.||+.||.|||++||+||||||+||++   +.++.+||+|||++........   .....||+.|+|||++.+..+
T Consensus       148 ~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  224 (313)
T 1t46_A          148 LSFSYQVAKGMAFLASKNCIHRDLAARNILL---THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVY  224 (313)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCC
T ss_pred             HHHHHHHHHHHHHHHHCCeecCCCccceEEE---cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCC
Confidence            9999999999999999999999999999999   6678899999999986544332   223457889999999998899


Q ss_pred             CchhhhHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          222 TSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       222 ~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      +.++||||||+++|+|++ |.+||.+..................  ....+|+.+.++|.+||..||.+|||+.+++++
T Consensus       225 ~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  301 (313)
T 1t46_A          225 TFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRML--SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQL  301 (313)
T ss_dssp             CHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCC--CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHHhccCCCCC--CcccCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence            999999999999999999 9999988776554444443332222  125689999999999999999999999999973

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.1e-44  Score=350.01  Aligned_cols=258  Identities=26%  Similarity=0.373  Sum_probs=216.4

Q ss_pred             ccccccceeecc-cccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHH
Q 009980            5 TRKLTDEYEVTD-ILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDAL   83 (521)
Q Consensus         5 ~~~~~~~Y~~~~-~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (521)
                      ...-.++|.+.+ .||+|+||.||+|.++...++..||||++.....                           ......
T Consensus         4 ~~~~~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~---------------------------~~~~~~   56 (287)
T 1u59_A            4 LFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE---------------------------KADTEE   56 (287)
T ss_dssp             CBCCGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCC---------------------------HHHHHH
T ss_pred             ccccHHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccc---------------------------hhHHHH
Confidence            344567888887 9999999999999976544778899999864211                           123455


Q ss_pred             HHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Q 009980           84 LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQAN  162 (521)
Q Consensus        84 ~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~~~  162 (521)
                      +.+|+.+++++     +||||+++++++ ..+..|+||||+.|++|.+++... ..+++..+..++.||+.||.|||++|
T Consensus        57 ~~~E~~~l~~l-----~h~~i~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  130 (287)
T 1u59_A           57 MMREAQIMHQL-----DNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN  130 (287)
T ss_dssp             HHHHHHHHHHC-----CCTTBCCEEEEE-ESSSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHhC-----CCCCEeEEEEEe-cCCCcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            88999999998     999999999999 556799999999999999998654 56999999999999999999999999


Q ss_pred             CeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC----cccccCCcccccccccccCCCCchhhhHHHHHHHHHHH
Q 009980          163 IVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP----VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILL  238 (521)
Q Consensus       163 i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll  238 (521)
                      |+||||||+||++   +.++.+||+|||++........    .....||+.|+|||++.+..++.++||||||+++|+|+
T Consensus       131 i~H~dlkp~Nili---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell  207 (287)
T 1u59_A          131 FVHRDLAARNVLL---VNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEAL  207 (287)
T ss_dssp             EECCCCSGGGEEE---EETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHH
T ss_pred             EeeCCCchheEEE---cCCCCEEECcccceeeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHH
Confidence            9999999999999   5667899999999986543322    22335688999999998888999999999999999999


Q ss_pred             h-CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCc
Q 009980          239 S-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPW  301 (521)
Q Consensus       239 ~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~  301 (521)
                      + |..||.+.+..+....+..+.....   ...+|+.+.++|.+||..||.+|||+.++++|.+
T Consensus       208 t~g~~p~~~~~~~~~~~~i~~~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~  268 (287)
T 1u59_A          208 SYGQKPYKKMKGPEVMAFIEQGKRMEC---PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMR  268 (287)
T ss_dssp             TTSCCTTTTCCTHHHHHHHHTTCCCCC---CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred             cCCCCCcccCCHHHHHHHHhcCCcCCC---CCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence            8 9999999888888887777653322   2568999999999999999999999999998754

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=1.3e-44  Score=345.72  Aligned_cols=248  Identities=29%  Similarity=0.462  Sum_probs=215.3

Q ss_pred             ccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEI   88 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   88 (521)
                      .++|++.+.||+|+||.||+|.+.   +++.||+|++....                             .....+.+|+
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~---~~~~vaiK~~~~~~-----------------------------~~~~~~~~e~   54 (267)
T 3t9t_A            7 PSELTFVQEIGSGQFGLVHLGYWL---NKDKVAIKTIREGA-----------------------------MSEEDFIEEA   54 (267)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEET---TTEEEEEEEECTTT-----------------------------BCHHHHHHHH
T ss_pred             hhheeeeeEecCCCceeEEEEEec---CCCeEEEEEccccC-----------------------------CCHHHHHHHH
Confidence            478999999999999999999986   46789999986422                             1234688999


Q ss_pred             HHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecc
Q 009980           89 LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQANIVHRD  167 (521)
Q Consensus        89 ~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~~~i~H~d  167 (521)
                      .+++++     +||||+++++++.+++..|+||||++|++|.+++... +.+++..+..++.|++.||.|||++||+|||
T Consensus        55 ~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d  129 (267)
T 3t9t_A           55 EVMMKL-----SHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRD  129 (267)
T ss_dssp             HHHHTC-----CCTTBCCEEEEECSSSSCEEEECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSS
T ss_pred             HHHHhC-----CCCCEeeEEEEEccCCCeEEEEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence            999998     9999999999999999999999999999999999865 5689999999999999999999999999999


Q ss_pred             CCCCcEEEeeCCCCCCEEEeecCCCccCCCCC--CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CCCCC
Q 009980          168 LKPENCLFLNDREDSPLKIMDFGLSSVEGYTD--PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPF  244 (521)
Q Consensus       168 lkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~pf  244 (521)
                      |||+||++   +.++.+||+|||++.......  ......||+.|+|||++.+..++.++||||+|+++|+|++ |.+||
T Consensus       130 l~p~Nili---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~  206 (267)
T 3t9t_A          130 LAARNCLV---GENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY  206 (267)
T ss_dssp             CCGGGEEE---CGGGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred             CchheEEE---CCCCCEEEcccccccccccccccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCC
Confidence            99999999   677889999999997653221  1233457889999999998899999999999999999999 99999


Q ss_pred             CCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          245 IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       245 ~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      .+.+..+....+..+.....   ...+++.+.+++.+||..||.+|||+.+++++
T Consensus       207 ~~~~~~~~~~~i~~~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  258 (267)
T 3t9t_A          207 ENRSNSEVVEDISTGFRLYK---PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQ  258 (267)
T ss_dssp             TTCCHHHHHHHHHTTCCCCC---CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCHHHHHHHHhcCCcCCC---CccCcHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            99888888888877643332   24579999999999999999999999999873

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=100.00  E-value=7.5e-45  Score=357.93  Aligned_cols=251  Identities=27%  Similarity=0.402  Sum_probs=207.0

Q ss_pred             cccceeecccccccCceEEEEeEEccCCCcce----EEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQ----VAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDAL   83 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~----vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (521)
                      ..++|++.+.||+|+||+||+|++..  +++.    ||+|.+.....                           ......
T Consensus        13 ~~~~y~~~~~lG~G~~g~Vy~~~~~~--~~~~~~~~vaiK~~~~~~~---------------------------~~~~~~   63 (327)
T 3poz_A           13 KETEFKKIKVLGSGAFGTVYKGLWIP--EGEKVKIPVAIKELREATS---------------------------PKANKE   63 (327)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEECC------CCEEEEEEEC----------------------------------CHHH
T ss_pred             CHHHcccceEEeeCCCeEEEEEEEcC--CCceEEEEEEEeecccccC---------------------------HHHHHH
Confidence            45789999999999999999999876  4444    57777643211                           122456


Q ss_pred             HHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 009980           84 LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQAN  162 (521)
Q Consensus        84 ~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~al~~lH~~~  162 (521)
                      +.+|+.+++++     +||||+++++++.++. .++|+||+.+|+|.+++.. .+.+++..+..++.||+.||.|||++|
T Consensus        64 ~~~E~~~l~~l-----~h~~iv~~~~~~~~~~-~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~  137 (327)
T 3poz_A           64 ILDEAYVMASV-----DNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR  137 (327)
T ss_dssp             HHHHHHHHHHC-----CBTTBCCEEEEEESSS-EEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHhC-----CCCCEeEEEEEEecCC-eEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence            88999999999     9999999999998765 7899999999999999987 467999999999999999999999999


Q ss_pred             CeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC---cccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh
Q 009980          163 IVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS  239 (521)
Q Consensus       163 i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~  239 (521)
                      |+||||||+|||+   +.++.+||+|||+|+.......   .....||+.|+|||++.+..++.++|||||||++|+|++
T Consensus       138 ivH~Dikp~NIll---~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt  214 (327)
T 3poz_A          138 LVHRDLAARNVLV---KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT  214 (327)
T ss_dssp             CCCSCCCGGGEEE---EETTEEEECCTTHHHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred             eeCCCCChheEEE---CCCCCEEEccCcceeEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHh
Confidence            9999999999999   5667899999999976433222   223457889999999999999999999999999999999


Q ss_pred             -CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          240 -GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       240 -g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                       |..||.+.+..+....+..+.....   ...++..+.+++.+||..||.+|||+.+++++
T Consensus       215 ~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  272 (327)
T 3poz_A          215 FGSKPYDGIPASEISSILEKGERLPQ---PPICTIDVYMIMVKCWMIDADSRPKFRELIIE  272 (327)
T ss_dssp             TSCCTTTTCCGGGHHHHHHTTCCCCC---CTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHH
T ss_pred             cCCCCccCCCHHHHHHHHHcCCCCCC---CccCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence             9999999888888777776653322   24589999999999999999999999999974

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=100.00  E-value=4.2e-45  Score=353.38  Aligned_cols=252  Identities=19%  Similarity=0.329  Sum_probs=205.4

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCC-----cceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGE-----TNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSD   81 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~-----~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (521)
                      ...++|++.+.||+|+||.||+|+++.++.     +..||+|++.....                            ...
T Consensus         5 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~----------------------------~~~   56 (289)
T 4fvq_A            5 IRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHR----------------------------NYS   56 (289)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGG----------------------------GGH
T ss_pred             echhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccH----------------------------HHH
Confidence            356899999999999999999999987321     15799999864221                            224


Q ss_pred             HHHHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHH
Q 009980           82 ALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQER-YMEVGAAAVIRQIAEGLAALHQ  160 (521)
Q Consensus        82 ~~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~-~~~~~~~~i~~qil~al~~lH~  160 (521)
                      ..+.+|+.+++++     +||||+++++++.+++..|+||||+.||+|.+++...+. +++..+..++.||+.||.|||+
T Consensus        57 ~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~  131 (289)
T 4fvq_A           57 ESFFEAASMMSKL-----SHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEE  131 (289)
T ss_dssp             HHHHHHHHHHHTS-----CCTTBCCEEEEECCTTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhC-----CCCCEeEEEEEEEeCCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence            5688999999998     999999999999999999999999999999999987654 9999999999999999999999


Q ss_pred             CCCeeccCCCCcEEEeeCCCC-----CCEEEeecCCCccCCCCCCcccccCCccccccccccc-CCCCchhhhHHHHHHH
Q 009980          161 ANIVHRDLKPENCLFLNDRED-----SPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQ-DRITSKSDMWSLGVIL  234 (521)
Q Consensus       161 ~~i~H~dlkp~Nil~~~~~~~-----~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il  234 (521)
                      +||+||||||+|||+..+...     +.+||+|||++.....   .....||+.|+|||++.+ ..++.++|||||||++
T Consensus       132 ~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il  208 (289)
T 4fvq_A          132 NTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLP---KDILQERIPWVPPECIENPKNLNLATDKWSFGTTL  208 (289)
T ss_dssp             TTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTTSC---HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHH
T ss_pred             CCeECCCcCcceEEEecCCcccccccceeeeccCcccccccC---ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHH
Confidence            999999999999999443211     1299999999975432   233458899999999987 6789999999999999


Q ss_pred             HHHHhCC-CCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          235 YILLSGY-PPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       235 ~~ll~g~-~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      |+|++|. +||...... ............+    ...++++.+|+.+||..||.+|||+.++++|
T Consensus       209 ~el~~g~~~~~~~~~~~-~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  269 (289)
T 4fvq_A          209 WEICSGGDKPLSALDSQ-RKLQFYEDRHQLP----APKAAELANLINNCMDYEPDHRPSFRAIIRD  269 (289)
T ss_dssp             HHHHTTTCCTTTTSCHH-HHHHHHHTTCCCC----CCSSCTTHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             HHHHcCCCCCccccchH-HHHHHhhccCCCC----CCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            9999954 555444443 3333333333333    3467889999999999999999999999985

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=100.00  E-value=5e-45  Score=354.00  Aligned_cols=255  Identities=22%  Similarity=0.306  Sum_probs=203.2

Q ss_pred             ccccccceeecccccccCceEEEEeEEc--cCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHH
Q 009980            5 TRKLTDEYEVTDILGRGGFSVVRRGIKK--TCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDA   82 (521)
Q Consensus         5 ~~~~~~~Y~~~~~lG~G~~g~V~~a~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (521)
                      .....++|++.+.||+|+||+||+|+..  ...+++.||||++....                            .....
T Consensus         5 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~----------------------------~~~~~   56 (295)
T 3ugc_A            5 TQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST----------------------------EEHLR   56 (295)
T ss_dssp             -CCCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCC----------------------------HHHHH
T ss_pred             CcCCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCC----------------------------HHHHH
Confidence            4556789999999999999999999842  12278899999986321                            12234


Q ss_pred             HHHHHHHHHHHHhhccCCCCCccceeEEEEe--CCeEEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH
Q 009980           83 LLTNEILVMRKIVENVSPHPNVIDLYDVYED--QNGVHLILELCSGGELFDRIVAQE-RYMEVGAAAVIRQIAEGLAALH  159 (521)
Q Consensus        83 ~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~--~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qil~al~~lH  159 (521)
                      .+.+|+.+++++     +||||+++++++..  ...+|+||||++||+|.+++...+ .+++..+..++.|++.||.|||
T Consensus        57 ~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH  131 (295)
T 3ugc_A           57 DFEREIEILKSL-----QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG  131 (295)
T ss_dssp             HHHHHHHHHHTC-----CCTTBCCEEEEECHHHHTSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhC-----CCCCEeeEEEEEecCCCCceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHh
Confidence            578999999998     99999999999854  356899999999999999998754 4999999999999999999999


Q ss_pred             HCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC----CcccccCCcccccccccccCCCCchhhhHHHHHHHH
Q 009980          160 QANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD----PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY  235 (521)
Q Consensus       160 ~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~  235 (521)
                      ++||+||||||+||++   +.++.+||+|||++.......    ......||+.|+|||++.+..++.++||||+|+++|
T Consensus       132 ~~~ivH~Dikp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~  208 (295)
T 3ugc_A          132 TKRYIHRDLATRNILV---ENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY  208 (295)
T ss_dssp             HTTCCCSCCSGGGEEE---EETTEEEECCCCSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred             cCCcccCCCCHhhEEE---cCCCeEEEccCcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHH
Confidence            9999999999999999   566789999999998654322    122345778899999999999999999999999999


Q ss_pred             HHHhCCCCCCCCCcH----------------HHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          236 ILLSGYPPFIAQSNR----------------QKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       236 ~ll~g~~pf~~~~~~----------------~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      +|++|..||......                .....+..+.. .  +....+|+++.++|.+||..||.+|||+.++++
T Consensus       209 ~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~  284 (295)
T 3ugc_A          209 ELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR-L--PRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL  284 (295)
T ss_dssp             HHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCC-C--CCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhccCc-C--CCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            999999998653221                11222222221 1  123568999999999999999999999999986

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=100.00  E-value=1.9e-44  Score=347.30  Aligned_cols=258  Identities=26%  Similarity=0.356  Sum_probs=213.3

Q ss_pred             ccccccccceeecccccccCceEEEEeEEcc-CCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccH
Q 009980            3 QETRKLTDEYEVTDILGRGGFSVVRRGIKKT-CGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSD   81 (521)
Q Consensus         3 ~~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~-~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (521)
                      .......++|++.+.||+|+||.||+|++.. .+++..||+|++.....                           ....
T Consensus         5 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~---------------------------~~~~   57 (281)
T 3cc6_A            5 PQYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCT---------------------------LDNK   57 (281)
T ss_dssp             CCCSCCGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSC---------------------------HHHH
T ss_pred             ccceecccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccC---------------------------chHH
Confidence            3445567899999999999999999998764 22456799999864211                           1224


Q ss_pred             HHHHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH
Q 009980           82 ALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQ  160 (521)
Q Consensus        82 ~~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~  160 (521)
                      ..+.+|+.+++++     +||||+++++++.++ ..|+||||+.|++|.+++... ..+++..+..++.||+.||.|||+
T Consensus        58 ~~~~~E~~~l~~l-----~h~~i~~~~~~~~~~-~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~  131 (281)
T 3cc6_A           58 EKFMSEAVIMKNL-----DHPHIVKLIGIIEEE-PTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLES  131 (281)
T ss_dssp             HHHHHHHHHHHHH-----CCTTBCCEEEEECSS-SCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhC-----CCCCcceEEEEEcCC-CCEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHH
Confidence            5688999999999     999999999998654 568999999999999999765 459999999999999999999999


Q ss_pred             CCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC--CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHH
Q 009980          161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD--PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILL  238 (521)
Q Consensus       161 ~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll  238 (521)
                      +||+||||||+||++   +.++.+||+|||++.......  ......+|+.|+|||++.+..++.++||||||+++|+|+
T Consensus       132 ~~i~H~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll  208 (281)
T 3cc6_A          132 INCVHRDIAVRNILV---ASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEIL  208 (281)
T ss_dssp             TTCCCCCCSGGGEEE---EETTEEEECCCCGGGCC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred             CCcccCCCccceEEE---CCCCcEEeCccCCCcccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHH
Confidence            999999999999999   556789999999998654322  123345788999999999889999999999999999999


Q ss_pred             h-CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          239 S-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       239 ~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      + |..||...........+..+.....   ...+++.+.++|.+||..||.+|||+.+++++
T Consensus       209 t~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~  267 (281)
T 3cc6_A          209 SFGKQPFFWLENKDVIGVLEKGDRLPK---PDLCPPVLYTLMTRCWDYDPSDRPRFTELVCS  267 (281)
T ss_dssp             TTTCCTTTTSCGGGHHHHHHHTCCCCC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             hCCCCCcccCChHHHHHHHhcCCCCCC---CCCCCHHHHHHHHHHccCCchhCcCHHHHHHH
Confidence            8 9999988887777777766543322   24589999999999999999999999999973

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=100.00  E-value=3e-44  Score=351.07  Aligned_cols=256  Identities=25%  Similarity=0.416  Sum_probs=203.1

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      ....++|++.+.||+|+||.||+|.+..  +++.||||++.......                         ......+.
T Consensus        28 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~--~~~~vavK~~~~~~~~~-------------------------~~~~~~~~   80 (310)
T 2wqm_A           28 YNTLANFRIEKKIGRGQFSEVYRAACLL--DGVPVALKKVQIFDLMD-------------------------AKARADCI   80 (310)
T ss_dssp             TSSGGGEEEEEEEECC--CEEEEEEETT--TCCEEEEEEECTTSSCC-------------------------HHHHHHHH
T ss_pred             cccccceEEEEeecCCCCceEEEEEEcC--CCceEEEEeeehhhccC-------------------------HHHHHHHH
Confidence            4566799999999999999999999987  78899999986532211                         12345578


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA----QERYMEVGAAAVIRQIAEGLAALHQA  161 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qil~al~~lH~~  161 (521)
                      +|+.+++++     +||||+++++++...+..|+||||+.|++|.+++..    ...+++..+..++.||+.||.|||++
T Consensus        81 ~E~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~  155 (310)
T 2wqm_A           81 KEIDLLKQL-----NHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR  155 (310)
T ss_dssp             HHHHHHHTC-----CCTTBCCEEEEEEETTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHhC-----CCCCEeeEEEEEEcCCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC
Confidence            899999998     999999999999999999999999999999998864    46699999999999999999999999


Q ss_pred             CCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC-CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhC
Q 009980          162 NIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSG  240 (521)
Q Consensus       162 ~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g  240 (521)
                      ||+||||||+||++   +.++.+||+|||++....... ......||+.|+|||++.+..++.++||||||+++|+|++|
T Consensus       156 ~i~H~dl~p~NIl~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g  232 (310)
T 2wqm_A          156 RVMHRDIKPANVFI---TATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAAL  232 (310)
T ss_dssp             TCCCCCCCGGGEEE---CTTSCEEECCC------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHS
T ss_pred             CeeCCCCcHHHEEE---cCCCCEEEEeccceeeecCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhC
Confidence            99999999999999   778899999999997654322 22345689999999999998999999999999999999999


Q ss_pred             CCCCCCCCc--HHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          241 YPPFIAQSN--RQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       241 ~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      ..||.+...  ......+.......  .....+++++.++|.+||..||.+|||+.++++
T Consensus       233 ~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~  290 (310)
T 2wqm_A          233 QSPFYGDKMNLYSLCKKIEQCDYPP--LPSDHYSEELRQLVNMCINPDPEKRPDVTYVYD  290 (310)
T ss_dssp             SCTTC---CCHHHHHHHHHTTCSCC--CCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCcccchhHHHHHHHhhcccCCC--CcccccCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            999976532  34445555544332  223568999999999999999999999999987

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=100.00  E-value=8.3e-45  Score=347.73  Aligned_cols=254  Identities=20%  Similarity=0.261  Sum_probs=212.6

Q ss_pred             CCccccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCcccccccccccccc
Q 009980            1 MGQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVS   80 (521)
Q Consensus         1 ~~~~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (521)
                      |.+....-.++|++.+.||+|+||.||+|+++    ++.||||++......                          ...
T Consensus         1 m~~~~~i~~~~y~~~~~lg~G~~g~V~~~~~~----~~~~avK~~~~~~~~--------------------------~~~   50 (271)
T 3kmu_A            1 MNKHSGIDFKQLNFLTKLNENHSGELWKGRWQ----GNDIVVKVLKVRDWS--------------------------TRK   50 (271)
T ss_dssp             ---CCCCCGGGCEEEEEEEEETTEEEEEEEET----TEEEEEEEECCTTCC--------------------------HHH
T ss_pred             CCCcCCCCHHHhHHHHHhcCCCcceEEEEEEC----CeeEEEEEecccccC--------------------------HHH
Confidence            44556667789999999999999999999984    667999998653221                          122


Q ss_pred             HHHHHHHHHHHHHHhhccCCCCCccceeEEEEeC--CeEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHH
Q 009980           81 DALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQ--NGVHLILELCSGGELFDRIVAQE--RYMEVGAAAVIRQIAEGLA  156 (521)
Q Consensus        81 ~~~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~--~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~al~  156 (521)
                      ...+.+|+.+++++     +||||+++++++.+.  +..++||||++||+|.+++....  .+++..+..++.||+.||.
T Consensus        51 ~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~  125 (271)
T 3kmu_A           51 SRDFNEECPRLRIF-----SHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMA  125 (271)
T ss_dssp             HHHHHHHGGGGCCC-----SCTTEECEEEEECTTTSSSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhc-----CCCchhheEEEEccCCCCCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHH
Confidence            34578898888887     899999999999887  78999999999999999998765  4899999999999999999


Q ss_pred             HHHHCC--CeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCc---hhhhHHHH
Q 009980          157 ALHQAN--IVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITS---KSDMWSLG  231 (521)
Q Consensus       157 ~lH~~~--i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwslG  231 (521)
                      |||++|  |+||||||+||++   +.++.++|+|||++....    .....||+.|+|||++.+..++.   ++||||||
T Consensus       126 ~lH~~~~~i~H~dikp~Nil~---~~~~~~~l~~~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG  198 (271)
T 3kmu_A          126 FLHTLEPLIPRHALNSRSVMI---DEDMTARISMADVKFSFQ----SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFA  198 (271)
T ss_dssp             HHTTSSSCCTTCCCSGGGEEE---CTTSCEEEEGGGSCCTTS----CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHH
T ss_pred             HHhcCCCceecCCCccceEEE---cCCcceeEEeccceeeec----ccCccCCccccChhhhccCCCCCCCchhhHHHHH
Confidence            999999  9999999999999   777889999988875432    23346899999999998765544   89999999


Q ss_pred             HHHHHHHhCCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          232 VILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       232 ~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      +++|+|++|..||.+.+.......+........  .+..+|+.+.+++.+||..||.+|||+.++++
T Consensus       199 ~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  263 (271)
T 3kmu_A          199 VLLWELVTREVPFADLSNMEIGMKVALEGLRPT--IPPGISPHVSKLMKICMNEDPAKRPKFDMIVP  263 (271)
T ss_dssp             HHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCCC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHhCCCCccccChHHHHHHHHhcCCCCC--CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            999999999999998888877766665544332  23568999999999999999999999999986

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=100.00  E-value=2.6e-44  Score=355.25  Aligned_cols=258  Identities=24%  Similarity=0.352  Sum_probs=216.6

Q ss_pred             ccccccceeecccccccCceEEEEeEEccC-----CCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccc
Q 009980            5 TRKLTDEYEVTDILGRGGFSVVRRGIKKTC-----GETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSV   79 (521)
Q Consensus         5 ~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (521)
                      .....++|++.+.||+|+||.||+|.+...     .++..||||++.....                           ..
T Consensus        30 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~---------------------------~~   82 (334)
T 2pvf_A           30 WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT---------------------------EK   82 (334)
T ss_dssp             TBCCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCC---------------------------HH
T ss_pred             ccCCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCc---------------------------HH
Confidence            344568999999999999999999998521     2567899999864211                           12


Q ss_pred             cHHHHHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC----------------CCCHHH
Q 009980           80 SDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE----------------RYMEVG  143 (521)
Q Consensus        80 ~~~~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~----------------~~~~~~  143 (521)
                      ....+.+|+.+++++    .+||||+++++++...+.+|+||||+.||+|.+++....                .+++..
T Consensus        83 ~~~~~~~E~~~l~~l----~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (334)
T 2pvf_A           83 DLSDLVSEMEMMKMI----GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD  158 (334)
T ss_dssp             HHHHHHHHHHHHHHH----CCCTTBCCEEEEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHH
T ss_pred             HHHHHHHHHHHHHHh----hcCCCEeeEEEEEccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHH
Confidence            234578899999987    479999999999999999999999999999999998654                389999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC---cccccCCcccccccccccCC
Q 009980          144 AAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALLQDR  220 (521)
Q Consensus       144 ~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~  220 (521)
                      +..++.||+.||.|||++||+||||||+||++   +.++.+||+|||++........   .....+|+.|+|||++.+..
T Consensus       159 ~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  235 (334)
T 2pvf_A          159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRV  235 (334)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCE
T ss_pred             HHHHHHHHHHHHHHHHhCCeeCCCCccceEEE---cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCC
Confidence            99999999999999999999999999999999   7788999999999976543321   22345788999999999888


Q ss_pred             CCchhhhHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          221 ITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       221 ~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      ++.++||||||+++|+|++ |..||.+.+..+....+..+.....   ...+++.+.++|.+||..||.+|||+.+++++
T Consensus       236 ~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  312 (334)
T 2pvf_A          236 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDK---PANCTNELYMMMRDCWHAVPSQRPTFKQLVED  312 (334)
T ss_dssp             ECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCCC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHHHHhcCCCCCC---CccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            9999999999999999999 9999999888888777776643222   25689999999999999999999999999973

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=100.00  E-value=9.2e-45  Score=369.71  Aligned_cols=255  Identities=28%  Similarity=0.449  Sum_probs=197.3

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      .+|++.+.||+|+||+||... ..  +++.||||++.....                               ....+|+.
T Consensus        24 ~~y~~~~~LG~G~~G~V~~~~-~~--~~~~vAvK~~~~~~~-------------------------------~~~~~E~~   69 (432)
T 3p23_A           24 ISFCPKDVLGHGAEGTIVYRG-MF--DNRDVAVKRILPECF-------------------------------SFADREVQ   69 (432)
T ss_dssp             EEEEEEEEEEECGGGCEEEEE-ES--SSSEEEEEEECTTTE-------------------------------EECHHHHH
T ss_pred             EEEecCCeeecCcCEEEEEEE-Ee--CCeEEEEEEECHHHH-------------------------------HHHHHHHH
Confidence            469999999999999976433 33  678999999854211                               12467899


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE-RYMEVGAAAVIRQIAEGLAALHQANIVHRDL  168 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qil~al~~lH~~~i~H~dl  168 (521)
                      +++++    .+||||+++++++.+....|+|||||. |+|.+++.... .+++..+..++.||+.||.|||++||+||||
T Consensus        70 ~l~~l----~~HpnIv~l~~~~~~~~~~~lv~E~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDl  144 (432)
T 3p23_A           70 LLRES----DEHPNVIRYFCTEKDRQFQYIAIELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDL  144 (432)
T ss_dssp             HHHHS----CCCTTBCCEEEEEEETTEEEEEEECCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred             HHHhc----cCCCCcCeEEEEEecCCEEEEEEECCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCC
Confidence            88886    379999999999999999999999996 59999987654 4666678899999999999999999999999


Q ss_pred             CCCcEEEeeCC--CCCCEEEeecCCCccCCCCC----CcccccCCcccccccccc---cCCCCchhhhHHHHHHHHHHHh
Q 009980          169 KPENCLFLNDR--EDSPLKIMDFGLSSVEGYTD----PVVGLFGSIDYVSPEALL---QDRITSKSDMWSLGVILYILLS  239 (521)
Q Consensus       169 kp~Nil~~~~~--~~~~~kl~Dfg~a~~~~~~~----~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~~ll~  239 (521)
                      ||+|||+..++  ....+||+|||+|+......    .....+||+.|+|||++.   ...++.++|||||||++|+|++
T Consensus       145 Kp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt  224 (432)
T 3p23_A          145 KPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVIS  224 (432)
T ss_dssp             STTSEEECCCBTTTBCCEEECCTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHT
T ss_pred             CHHHEEEecCCCCCceeEEEecccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHc
Confidence            99999995432  33468899999998654321    234457999999999997   4567889999999999999999


Q ss_pred             -CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccC
Q 009980          240 -GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIG  304 (521)
Q Consensus       240 -g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~  304 (521)
                       |.+||...........+........ ......+..+++||.+||+.||.+|||+.++++||||..
T Consensus       225 ~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp~f~~  289 (432)
T 3p23_A          225 EGSHPFGKSLQRQANILLGACSLDCL-HPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWS  289 (432)
T ss_dssp             TSCBTTBSTTTHHHHHHTTCCCCTTS-CTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTSTTTCC
T ss_pred             CCCCCcchhhHHHHHHHhccCCcccc-CccccccHHHHHHHHHHHhCCHhhCCCHHHHHhCccccC
Confidence             9999976555443332222222111 112345677899999999999999999999999999974

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=100.00  E-value=1.3e-44  Score=362.19  Aligned_cols=253  Identities=27%  Similarity=0.364  Sum_probs=203.9

Q ss_pred             cccceeecccccccCceEEEEeEEccC-CCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTC-GETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      -.++|++.+.||+|+||.||+|+++.. .++..||||+++....                           ......+.+
T Consensus        43 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~---------------------------~~~~~~~~~   95 (373)
T 2qol_A           43 DATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT---------------------------EKQRRDFLG   95 (373)
T ss_dssp             CGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCC---------------------------HHHHHHHHH
T ss_pred             CHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccC---------------------------HHHHHHHHH
Confidence            346899999999999999999988731 2567899999864211                           122345889


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE-RYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      |+.+++++     +||||+++++++...+.+|+||||++||+|.+++...+ .+++..+..++.||+.||.|||++||+|
T Consensus        96 E~~~l~~l-----~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH  170 (373)
T 2qol_A           96 EASIMGQF-----DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVH  170 (373)
T ss_dssp             HHHHHTTC-----CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             HHHHHHhC-----CCCCCCeEEEEEeeCCceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeC
Confidence            99999988     99999999999999999999999999999999997654 6999999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC----cccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-C
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP----VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-G  240 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g  240 (521)
                      |||||+|||+   +.++.+||+|||+++.......    .....+|+.|+|||++.+..++.++|||||||++|+|++ |
T Consensus       171 ~Dlkp~NIll---~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g  247 (373)
T 2qol_A          171 RDLAARNILI---NSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG  247 (373)
T ss_dssp             SCCCGGGEEE---CTTCCEEECCC----------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC
T ss_pred             CCCCcceEEE---cCCCCEEECcCccccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCC
Confidence            9999999999   7788999999999986543221    112235778999999999999999999999999999998 9


Q ss_pred             CCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          241 YPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       241 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      ..||.+.+..+....+..+.....   ...++..+.+++.+||..||.+|||+.++++
T Consensus       248 ~~P~~~~~~~~~~~~i~~~~~~~~---~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~  302 (373)
T 2qol_A          248 ERPYWEMSNQDVIKAVDEGYRLPP---PMDCPAALYQLMLDCWQKDRNNRPKFEQIVS  302 (373)
T ss_dssp             -CTTTTCCHHHHHHHHHTTEECCC---CTTCBHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHcCCCCCC---CccccHHHHHHHHHHhCcChhhCcCHHHHHH
Confidence            999999888888777766532221   2468899999999999999999999999986

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=100.00  E-value=3.5e-44  Score=353.01  Aligned_cols=250  Identities=27%  Similarity=0.404  Sum_probs=205.6

Q ss_pred             cccceeecccccccCceEEEEeEEccCCCcceE----EEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQV----AIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDAL   83 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~v----aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (521)
                      ..++|++.+.||+|+||.||+|+++.  +++.|    |+|.+.....                           ......
T Consensus        13 ~~~~y~~~~~lG~G~~g~Vy~~~~~~--~~~~~~~kv~iK~~~~~~~---------------------------~~~~~~   63 (327)
T 3lzb_A           13 KETEFKKIKVLGSGAFGTVYKGLWIP--EGEKVKIPVAIKELREATS---------------------------PKANKE   63 (327)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEECC--TTCSCCEEEEEEEECCCSS---------------------------CCCHHH
T ss_pred             CHhHceEEEEeeeCCCeEEEEEEEcC--CCceEEEEEEEEeeccccC---------------------------HHHHHH
Confidence            35799999999999999999999987  55555    5555532211                           123456


Q ss_pred             HHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 009980           84 LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQAN  162 (521)
Q Consensus        84 ~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~al~~lH~~~  162 (521)
                      +.+|+.+++++     +||||+++++++..+. .++|++|+.+|+|.+++.. .+.+++..+..++.||+.||.|||++|
T Consensus        64 ~~~E~~~l~~l-----~hp~iv~~~~~~~~~~-~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  137 (327)
T 3lzb_A           64 ILDEAYVMASV-----DNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR  137 (327)
T ss_dssp             HHHHHHHHTTC-----CBTTBCCCCEEEESSS-EEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHhC-----CCCCeeEEEEEEecCC-ceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence            88999999988     9999999999998765 7899999999999999976 457999999999999999999999999


Q ss_pred             CeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC---cccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh
Q 009980          163 IVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS  239 (521)
Q Consensus       163 i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~  239 (521)
                      |+||||||+|||+   +.++.+||+|||+|+.......   .....||+.|+|||++.+..++.++|||||||++|+|++
T Consensus       138 ivH~Dikp~NIl~---~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~  214 (327)
T 3lzb_A          138 LVHRDLAARNVLV---KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT  214 (327)
T ss_dssp             CCCSCCCGGGEEE---EETTEEEECCTTC----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred             CcCCCCCHHHEEE---cCCCCEEEccCcceeEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHH
Confidence            9999999999999   5667899999999986543222   223457889999999999999999999999999999999


Q ss_pred             -CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          240 -GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       240 -g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                       |.+||.+.+..+....+..+.....   ...++.++.++|.+||..||.+|||+.++++
T Consensus       215 ~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  271 (327)
T 3lzb_A          215 FGSKPYDGIPASEISSILEKGERLPQ---PPICTIDVYMIMRKCWMIDADSRPKFRELII  271 (327)
T ss_dssp             TSCCTTTTCCGGGHHHHHHTTCCCCC---CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHcCCCCCC---CccCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence             9999999888888877776653332   2458999999999999999999999999997

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=100.00  E-value=6.6e-44  Score=366.14  Aligned_cols=245  Identities=24%  Similarity=0.376  Sum_probs=210.8

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      .-.++|++.+.||+|+||.||+|..+    ++.||||+++...                              ....+.+
T Consensus       190 i~~~~~~~~~~lG~G~fg~V~~~~~~----~~~vavK~~~~~~------------------------------~~~~~~~  235 (450)
T 1k9a_A          190 LNMKELKLLQTIGKGEFGDVMLGDYR----GNKVAVKCIKNDA------------------------------TAQAFLA  235 (450)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEET----TEEEEEEEESSCT------------------------------TSHHHHH
T ss_pred             cChHHeEEEeeecCcCCeeEEEEEec----CCeEEEEEeCCch------------------------------HHHHHHH
Confidence            34578999999999999999999874    5689999986421                              1245889


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeCC-eEEEEEeccCCCchHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCC
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQN-GVHLILELCSGGELFDRIVAQER--YMEVGAAAVIRQIAEGLAALHQANI  163 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~~-~~~lv~e~~~gg~L~~~l~~~~~--~~~~~~~~i~~qil~al~~lH~~~i  163 (521)
                      |+.+++++     +||||+++++++.... .+|+|||||.||+|.+++...+.  +++..+..++.||+.||.|||++||
T Consensus       236 E~~~l~~l-----~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i  310 (450)
T 1k9a_A          236 EASVMTQL-----RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF  310 (450)
T ss_dssp             HHHHHHTC-----CCTTBCCEEEEEECTTSCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHhc-----cCCCEEEEEEEEEcCCCceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            99999998     9999999999987665 79999999999999999987654  7999999999999999999999999


Q ss_pred             eeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CCC
Q 009980          164 VHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYP  242 (521)
Q Consensus       164 ~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~  242 (521)
                      +||||||+|||+   +.++.+||+|||+++......  ....+|+.|+|||++.+..++.++|||||||++|+|++ |..
T Consensus       311 vHrDlkp~Nill---~~~~~~kl~DfG~a~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~  385 (450)
T 1k9a_A          311 VHRDLAARNVLV---SEDNVAKVSDFGLTKEASSTQ--DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRV  385 (450)
T ss_dssp             ECSCCCGGGEEE---CTTSCEEECCCTTCEECC--------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred             eCCCCCHhhEEE---CCCCCEEEeeCCCcccccccc--cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence            999999999999   778899999999998644322  22357889999999999999999999999999999998 999


Q ss_pred             CCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          243 PFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       243 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      ||.+.+..+....+..+....   .+..+|+.+.++|.+||..||.+|||+.+++.
T Consensus       386 P~~~~~~~~~~~~i~~~~~~~---~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~  438 (450)
T 1k9a_A          386 PYPRIPLKDVVPRVEKGYKMD---APDGCPPAVYDVMKNCWHLDAATRPTFLQLRE  438 (450)
T ss_dssp             SSTTSCTTTHHHHHHTTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCCCHHHHHHHHHcCCCCC---CCCcCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            999988888888877764321   23568999999999999999999999999985

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=100.00  E-value=5.9e-44  Score=343.52  Aligned_cols=252  Identities=27%  Similarity=0.387  Sum_probs=215.0

Q ss_pred             ccccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHH
Q 009980            3 QETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDA   82 (521)
Q Consensus         3 ~~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (521)
                      .+.+...++|++.+.||+|+||.||+|.+.   .+..||||++....                             ....
T Consensus         6 ~~~~v~~~~y~~~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~-----------------------------~~~~   53 (279)
T 1qpc_A            6 DEWEVPRETLKLVERLGAGQFGEVWMGYYN---GHTKVAVKSLKQGS-----------------------------MSPD   53 (279)
T ss_dssp             CTTBCCGGGEEEEEEEEEETTEEEEEEEET---TTEEEEEEEECTTS-----------------------------SCHH
T ss_pred             hhcccCHHhhhheeeecCCCCeEEEEEEEc---CCcEEEEEEecCCc-----------------------------ccHH
Confidence            345567789999999999999999999976   45689999986421                             1235


Q ss_pred             HHHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH
Q 009980           83 LLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE--RYMEVGAAAVIRQIAEGLAALHQ  160 (521)
Q Consensus        83 ~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~al~~lH~  160 (521)
                      .+.+|+.+++++     +||||+++++++. .+..|+||||+.|++|.+++....  .+++..+..++.|++.||.|||+
T Consensus        54 ~~~~E~~~l~~l-----~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  127 (279)
T 1qpc_A           54 AFLAEANLMKQL-----QHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE  127 (279)
T ss_dssp             HHHHHHHHHHHC-----CCTTBCCEEEEEC-SSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhC-----CCcCcceEEEEEc-CCCcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            688999999998     9999999999986 456899999999999999987543  69999999999999999999999


Q ss_pred             CCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC--CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHH
Q 009980          161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD--PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILL  238 (521)
Q Consensus       161 ~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll  238 (521)
                      +||+||||||+||++   +.++.+||+|||++.......  ......+|+.|+|||++.+..++.++||||||+++|+|+
T Consensus       128 ~~i~H~dikp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~  204 (279)
T 1qpc_A          128 RNYIHRDLRAANILV---SDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV  204 (279)
T ss_dssp             TTEECSCCSGGGEEE---CTTSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHH
T ss_pred             CCeeccCCCHhhEEE---cCCCCEEECCCcccccccCcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHH
Confidence            999999999999999   778899999999998654322  122345788999999999888999999999999999999


Q ss_pred             h-CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          239 S-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       239 ~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      + |.+||.+.+..+....+..+.....   ...+++.+.+++.+||..||.+|||+.++++
T Consensus       205 ~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  262 (279)
T 1qpc_A          205 THGRIPYPGMTNPEVIQNLERGYRMVR---PDNCPEELYQLMRLCWKERPEDRPTFDYLRS  262 (279)
T ss_dssp             TTTCCSSTTCCHHHHHHHHHTTCCCCC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hCCCCCCcccCHHHHHHHHhcccCCCC---cccccHHHHHHHHHHhccChhhCCCHHHHHH
Confidence            9 9999999888888877776643222   2568999999999999999999999999986

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=100.00  E-value=3.3e-45  Score=359.64  Aligned_cols=256  Identities=24%  Similarity=0.370  Sum_probs=208.1

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      ....++|++.+.||+|+||.||+|+++   +++.||||.+.....                            .....+.
T Consensus        35 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~----------------------------~~~~~~~   83 (321)
T 2qkw_B           35 EEATNNFDHKFLIGHGVFGKVYKGVLR---DGAKVALKRRTPESS----------------------------QGIEEFE   83 (321)
T ss_dssp             CCCCCCCSCCCCSCBCSSSEEEEEECT---TCCEEEEEECCSCCS----------------------------SHHHHHH
T ss_pred             HHHHhccCccceeecCCCeeEEEEEEC---CCCEEEEEEecccCh----------------------------HHHHHHH
Confidence            456789999999999999999999965   578999998754211                            1234578


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE----RYMEVGAAAVIRQIAEGLAALHQA  161 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~----~~~~~~~~~i~~qil~al~~lH~~  161 (521)
                      +|+.+++++     +||||+++++++...+..|+||||+.||+|.+++....    .+++..+..++.|++.||.|||++
T Consensus        84 ~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~  158 (321)
T 2qkw_B           84 TEIETLSFC-----RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR  158 (321)
T ss_dssp             HHHHGGGSC-----CCTTBCCEEEECCCTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHhC-----CCCCEeeEEEEEcCCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC
Confidence            899999887     99999999999999999999999999999999886543    589999999999999999999999


Q ss_pred             CCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC---CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHH
Q 009980          162 NIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD---PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILL  238 (521)
Q Consensus       162 ~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll  238 (521)
                      ||+||||||+||++   +.++.+||+|||+++......   ......||+.|+|||++.+..++.++|||||||++|+|+
T Consensus       159 ~ivH~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell  235 (321)
T 2qkw_B          159 AIIHRDVKSINILL---DENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVL  235 (321)
T ss_dssp             TEECSCCCSTTEEE---CTTCCEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHH
T ss_pred             CeecCCCCHHHEEE---CCCCCEEEeecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHH
Confidence            99999999999999   778899999999997543221   223446899999999999889999999999999999999


Q ss_pred             hCCCCCCCCCcHHHHH-------HHHcCCC------CCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCC
Q 009980          239 SGYPPFIAQSNRQKQQ-------MIMAGEF------SFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHP  300 (521)
Q Consensus       239 ~g~~pf~~~~~~~~~~-------~i~~~~~------~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~  300 (521)
                      +|+.||.+....+...       ....+..      .........++..+.+++.+||..||.+|||+.++++|.
T Consensus       236 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L  310 (321)
T 2qkw_B          236 CARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL  310 (321)
T ss_dssp             HCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             hCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence            9999997654332111       1111111      011112234677899999999999999999999999754

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=100.00  E-value=2e-44  Score=353.30  Aligned_cols=257  Identities=24%  Similarity=0.340  Sum_probs=211.5

Q ss_pred             cccccceeecccccccCceEEEEeEEcc---CCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKT---CGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDA   82 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~---~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (521)
                      ....++|++.+.||+|+||.||+|.+..   ..+++.||||++.....                           .....
T Consensus        23 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---------------------------~~~~~   75 (316)
T 2xir_A           23 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT---------------------------HSEHR   75 (316)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC---------------------------HHHHH
T ss_pred             ecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCC---------------------------cHHHH
Confidence            3456899999999999999999998632   22678999999864211                           11234


Q ss_pred             HHHHHHHHHHHHhhccCCCCCccceeEEEEeCC-eEEEEEeccCCCchHHHHHhcCC----------------CCHHHHH
Q 009980           83 LLTNEILVMRKIVENVSPHPNVIDLYDVYEDQN-GVHLILELCSGGELFDRIVAQER----------------YMEVGAA  145 (521)
Q Consensus        83 ~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~-~~~lv~e~~~gg~L~~~l~~~~~----------------~~~~~~~  145 (521)
                      .+.+|+.++.++    .+||||+++++++...+ .+|+||||+.|++|.+++.....                +++..+.
T Consensus        76 ~~~~E~~~l~~l----~~hp~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (316)
T 2xir_A           76 ALMSELKILIHI----GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI  151 (316)
T ss_dssp             HHHHHHHHHHHH----CCCTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHH
T ss_pred             HHHHHHHHHHhc----ccCCCeeeEEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHH
Confidence            578899999988    46899999999987765 59999999999999999987654                8999999


Q ss_pred             HHHHHHHHHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC---cccccCCcccccccccccCCCC
Q 009980          146 AVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALLQDRIT  222 (521)
Q Consensus       146 ~i~~qil~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~  222 (521)
                      .++.||+.||.|||++||+||||||+||++   +.++.+||+|||+++.......   .....||+.|+|||++.+..++
T Consensus       152 ~~~~qi~~al~~lH~~~i~H~dikp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~  228 (316)
T 2xir_A          152 CYSFQVAKGMEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYT  228 (316)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCC
T ss_pred             HHHHHHHHHHHHHHhCCcccccCccceEEE---CCCCCEEECCCccccccccCccceeccCCCcceeecCchhhcccccc
Confidence            999999999999999999999999999999   6778899999999986543222   2334678899999999999999


Q ss_pred             chhhhHHHHHHHHHHHh-CCCCCCCCCcHH-HHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          223 SKSDMWSLGVILYILLS-GYPPFIAQSNRQ-KQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       223 ~~~DiwslG~il~~ll~-g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      .++||||||+++|+|++ |..||.+..... ....+..+....   ....+++.+.++|.+||..||.+|||+.++++|
T Consensus       229 ~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  304 (316)
T 2xir_A          229 IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR---APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  304 (316)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHHhccCccCC---CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            99999999999999998 999998876444 334444433221   124589999999999999999999999999985

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=100.00  E-value=5.2e-44  Score=349.88  Aligned_cols=256  Identities=26%  Similarity=0.348  Sum_probs=206.3

Q ss_pred             ccccceeecccccccCceEEEEeEEcc-CCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKT-CGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~-~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      .-.++|++.+.||+|+||.||+|.... .+++..||||++......                          ......+.
T Consensus        31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~--------------------------~~~~~~~~   84 (313)
T 3brb_A           31 IDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSS--------------------------QREIEEFL   84 (313)
T ss_dssp             CCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCC--------------------------HHHHHHHH
T ss_pred             cCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccc--------------------------hhHHHHHH
Confidence            345799999999999999999998764 235668999998643211                          11234578


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCC-----eEEEEEeccCCCchHHHHHh------cCCCCHHHHHHHHHHHHHH
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQN-----GVHLILELCSGGELFDRIVA------QERYMEVGAAAVIRQIAEG  154 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~-----~~~lv~e~~~gg~L~~~l~~------~~~~~~~~~~~i~~qil~a  154 (521)
                      +|+.+++++     +||||+++++++...+     ..|+||||+.+++|.+++..      ...+++..++.++.||+.|
T Consensus        85 ~e~~~l~~l-----~h~~iv~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~a  159 (313)
T 3brb_A           85 SEAACMKDF-----SHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG  159 (313)
T ss_dssp             HHHHHHHTC-----CCTTBCCCCEEEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHhcC-----CCCCeeeeeEEEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHH
Confidence            899999998     9999999999997765     35999999999999999843      3569999999999999999


Q ss_pred             HHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC---CcccccCCcccccccccccCCCCchhhhHHHH
Q 009980          155 LAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD---PVVGLFGSIDYVSPEALLQDRITSKSDMWSLG  231 (521)
Q Consensus       155 l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG  231 (521)
                      |.|||++||+||||||+||++   +.++.+||+|||++.......   ......+++.|+|||.+.+..++.++||||||
T Consensus       160 L~~LH~~~ivH~dikp~NIli---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  236 (313)
T 3brb_A          160 MEYLSNRNFLHRDLAARNCML---RDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFG  236 (313)
T ss_dssp             HHHHHTTTCCCCCCSGGGEEE---CTTSCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHH
T ss_pred             HHHHHhCCcccCCCCcceEEE---cCCCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHH
Confidence            999999999999999999999   777899999999997653322   12234578899999999999999999999999


Q ss_pred             HHHHHHHh-CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          232 VILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       232 ~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      +++|+|++ |.+||.+.+.......+..+.....   ...+++.+.++|.+||..||.+|||+.+++++
T Consensus       237 ~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  302 (313)
T 3brb_A          237 VTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQ---PEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQ  302 (313)
T ss_dssp             HHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCC---BTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHhcCCCCCccCCHHHHHHHHHcCCCCCC---CccccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            99999999 9999999888888887777653322   25689999999999999999999999999873

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=100.00  E-value=1.1e-44  Score=355.94  Aligned_cols=249  Identities=21%  Similarity=0.271  Sum_probs=198.3

Q ss_pred             cccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      -.++|++.+.||+|+||+||+|++.    ++.||||++....                             ........|
T Consensus        22 ~~~~y~~~~~lg~G~~g~Vy~~~~~----~~~vavK~~~~~~-----------------------------~~~~~~~~E   68 (322)
T 3soc_A           22 QSMPLQLLEVKARGRFGCVWKAQLL----NEYVAVKIFPIQD-----------------------------KQSWQNEYE   68 (322)
T ss_dssp             TTEEEEEEEEEECSTTCEEEEEEET----TEEEEEEEECGGG-----------------------------HHHHHHHHH
T ss_pred             chhhchhhheecccCceEEEEEEEC----CCEEEEEEeecCc-----------------------------hHHHHHHHH
Confidence            3568999999999999999999874    6789999985421                             122335568


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEeCC----eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYEDQN----GVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQA--  161 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~~~----~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~--  161 (521)
                      +.+++++     +||||+++++++....    .+|+|||||+||+|.+++.. ..+++..+..++.|++.||.|||+.  
T Consensus        69 ~~~l~~l-----~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~qi~~al~~LH~~~~  142 (322)
T 3soc_A           69 VYSLPGM-----KHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKA-NVVSWNELCHIAETMARGLAYLHEDIP  142 (322)
T ss_dssp             HHTSTTC-----CCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHTCCEE
T ss_pred             HHHHhcC-----CCCCchhhcceeccCCCCCceEEEEEecCCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhhcc
Confidence            8878777     8999999999998754    47999999999999999976 4599999999999999999999999  


Q ss_pred             --------CCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC---CcccccCCccccccccccc-----CCCCchh
Q 009980          162 --------NIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD---PVVGLFGSIDYVSPEALLQ-----DRITSKS  225 (521)
Q Consensus       162 --------~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-----~~~~~~~  225 (521)
                              ||+||||||+|||+   +.++.+||+|||+|+......   ......||+.|+|||++.+     ..++.++
T Consensus       143 ~l~~~~~~~ivH~Dlkp~Nill---~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  219 (322)
T 3soc_A          143 GLKDGHKPAISHRDIKSKNVLL---KNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRI  219 (322)
T ss_dssp             EETTEEECEEECSCCSGGGEEE---CTTCCEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHH
T ss_pred             ccccccCCCEEeCCCChHhEEE---CCCCeEEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccc
Confidence                    99999999999999   778899999999997643322   2234579999999999976     3566789


Q ss_pred             hhHHHHHHHHHHHhCCCCCCCCCc----------------HHHHHHHHcCCCCC-chhhh--hccCHHHHHHHHHhccCC
Q 009980          226 DMWSLGVILYILLSGYPPFIAQSN----------------RQKQQMIMAGEFSF-YEQTW--KNISSSAKQLISSLLTVD  286 (521)
Q Consensus       226 DiwslG~il~~ll~g~~pf~~~~~----------------~~~~~~i~~~~~~~-~~~~~--~~~s~~~~~li~~~l~~d  286 (521)
                      |||||||++|+|++|++||.+...                ......+....... ....|  ...++.+.+||.+||+.|
T Consensus       220 DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d  299 (322)
T 3soc_A          220 DMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHD  299 (322)
T ss_dssp             HHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSS
T ss_pred             hhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCC
Confidence            999999999999999999976432                12222222222211 11111  124566999999999999


Q ss_pred             CCCCCCHHHHHc
Q 009980          287 PNRRPSAQELLN  298 (521)
Q Consensus       287 p~~R~t~~~~l~  298 (521)
                      |.+|||+.++++
T Consensus       300 P~~Rps~~ell~  311 (322)
T 3soc_A          300 AEARLSAGCVGE  311 (322)
T ss_dssp             GGGSCCHHHHHH
T ss_pred             hhhCcCHHHHHH
Confidence            999999999986

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=100.00  E-value=2.6e-44  Score=347.83  Aligned_cols=255  Identities=27%  Similarity=0.462  Sum_probs=199.9

Q ss_pred             cccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHH
Q 009980            4 ETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDAL   83 (521)
Q Consensus         4 ~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (521)
                      .++...++|++.+.||+|+||.||+|++..     .||||+++.....                          ......
T Consensus        18 ~~ei~~~~y~~~~~lG~G~~g~Vy~~~~~~-----~vavK~~~~~~~~--------------------------~~~~~~   66 (289)
T 3og7_A           18 DWEIPDGQITVGQRIGSGSFGTVYKGKWHG-----DVAVKMLNVTAPT--------------------------PQQLQA   66 (289)
T ss_dssp             CCBCCTTSCEEEEEEEECSSEEEEEEESSS-----EEEEEEESCSSCC--------------------------HHHHHH
T ss_pred             CCccCccceeeeeEecCCCCeEEEEEEEcC-----ceEEEEEeccCCC--------------------------HHHHHH
Confidence            456677899999999999999999998653     4999998643211                          122355


Q ss_pred             HHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 009980           84 LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQAN  162 (521)
Q Consensus        84 ~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~al~~lH~~~  162 (521)
                      +.+|+.+++++     +||||++++++ ......++||||+.|++|.+++.. ...+++..+..++.||+.||.|||++|
T Consensus        67 ~~~E~~~l~~l-----~h~~iv~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~  140 (289)
T 3og7_A           67 FKNEVGVLRKT-----RHVNILLFMGY-STAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS  140 (289)
T ss_dssp             HHHHHHHHTTC-----CCTTBCCEEEE-ECSSSCEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHhC-----CCCcEEEEEee-ccCCccEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            88999999988     99999999995 456678999999999999999864 456999999999999999999999999


Q ss_pred             CeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCC---CCCcccccCCcccccccccc---cCCCCchhhhHHHHHHHHH
Q 009980          163 IVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGY---TDPVVGLFGSIDYVSPEALL---QDRITSKSDMWSLGVILYI  236 (521)
Q Consensus       163 i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~~  236 (521)
                      |+||||||+||++   +.++.+||+|||++.....   ........||+.|+|||++.   +..++.++||||||+++|+
T Consensus       141 i~H~Dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~e  217 (289)
T 3og7_A          141 IIHRDLKSNNIFL---HEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYE  217 (289)
T ss_dssp             CCCSCCCGGGEEE---ETTTEEEECCCC------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHH
T ss_pred             cccccCccceEEE---CCCCCEEEccceeccccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHH
Confidence            9999999999999   6678899999999975432   12233457999999999986   5678899999999999999


Q ss_pred             HHhCCCCCCCCCcHHH-HHHHHcCCCCCc-hhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          237 LLSGYPPFIAQSNRQK-QQMIMAGEFSFY-EQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       237 ll~g~~pf~~~~~~~~-~~~i~~~~~~~~-~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      |++|..||.+...... ...+..+..... ......+|+.+.+||.+||..||.+|||+.++++
T Consensus       218 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~  281 (289)
T 3og7_A          218 LMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILA  281 (289)
T ss_dssp             HHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHCCCCccccchHHHHHHHhcccccCcchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            9999999988665544 444444443332 2233578999999999999999999999999986

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=100.00  E-value=5.6e-44  Score=370.73  Aligned_cols=249  Identities=26%  Similarity=0.404  Sum_probs=216.2

Q ss_pred             cccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      -.++|++.+.||+|+||.||+|+++.  ++..||||+++...                             .....+.+|
T Consensus       218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~--~~~~vavK~~~~~~-----------------------------~~~~~~~~E  266 (495)
T 1opk_A          218 ERTDITMKHKLGGGQYGEVYEGVWKK--YSLTVAVKTLKEDT-----------------------------MEVEEFLKE  266 (495)
T ss_dssp             CGGGEEEEEESGGGTTSSEEEEEEGG--GTEEEEEEECCSSS-----------------------------SCHHHHHHH
T ss_pred             CHHHceeeeEecCCCCeEEEEEEEcC--CCeEEEEEEecCcc-----------------------------cchHHHHHH
Confidence            45689999999999999999999987  78899999986421                             123568899


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ--ERYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      +.+++++     +||||+++++++.....+||||||+.||+|.+++...  ..+++..+..++.||+.||.|||++||+|
T Consensus       267 ~~~l~~l-----~hpniv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH  341 (495)
T 1opk_A          267 AAVMKEI-----KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH  341 (495)
T ss_dssp             HHHHHHC-----CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             HHHHHhc-----CCCCEeeEEEEEecCCcEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence            9999999     9999999999999999999999999999999999864  45899999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC--CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CCC
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD--PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYP  242 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~  242 (521)
                      |||||+|||+   +.++.+||+|||+++......  ......+|+.|+|||++.+..++.++|||||||++|+|++ |..
T Consensus       342 rDlkp~NIll---~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~  418 (495)
T 1opk_A          342 RNLAARNCLV---GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS  418 (495)
T ss_dssp             SCCSGGGEEE---CGGGCEEECCTTCEECCTTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCC
T ss_pred             CCCChhhEEE---CCCCcEEEeecccceeccCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCC
Confidence            9999999999   677899999999998654322  1223456788999999998899999999999999999999 999


Q ss_pred             CCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          243 PFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       243 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      ||.+.+..+....+..+...   ..+..+|+.+.+||.+||..||.+|||+.++++
T Consensus       419 p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~  471 (495)
T 1opk_A          419 PYPGIDLSQVYELLEKDYRM---ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ  471 (495)
T ss_dssp             SSTTCCGGGHHHHHHTTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCCCHHHHHHHHHcCCCC---CCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHH
Confidence            99998888877777665322   223568999999999999999999999999987

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=100.00  E-value=4.3e-44  Score=348.59  Aligned_cols=252  Identities=25%  Similarity=0.311  Sum_probs=204.1

Q ss_pred             ccccceeecccccccCceEEEEeEE----ccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIK----KTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDA   82 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~----~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (521)
                      ...++|++.+.||+|+||.||+|+.    ..  +++.||||++......                           ....
T Consensus        18 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~--~~~~vavK~~~~~~~~---------------------------~~~~   68 (302)
T 4e5w_A           18 FEKRFLKRIRDLGEGHFGKVELCRYDPEGDN--TGEQVAVKSLKPESGG---------------------------NHIA   68 (302)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEECTTSSS--CSEEEEEEEEC--------------------------------CCHH
T ss_pred             hhhhhhhhhhccCCCCceEEEEEEEccccCc--cCeEEEEEEecccccc---------------------------hhHH
Confidence            3456799999999999999999983    44  7889999998643211                           1235


Q ss_pred             HHHHHHHHHHHHhhccCCCCCccceeEEEEeC--CeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH
Q 009980           83 LLTNEILVMRKIVENVSPHPNVIDLYDVYEDQ--NGVHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALH  159 (521)
Q Consensus        83 ~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~--~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~al~~lH  159 (521)
                      .+.+|+.+++++     +||||+++++++...  ..+|+||||+.|++|.+++.. ...+++..+..++.|++.||.|||
T Consensus        69 ~~~~E~~~l~~l-----~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH  143 (302)
T 4e5w_A           69 DLKKEIEILRNL-----YHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG  143 (302)
T ss_dssp             HHHHHHHHHHTC-----CCTTBCCEEEEEEC---CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhC-----CCCCeeeeeeEEecCCCceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhh
Confidence            588999999998     999999999999877  679999999999999999954 467999999999999999999999


Q ss_pred             HCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC----cccccCCcccccccccccCCCCchhhhHHHHHHHH
Q 009980          160 QANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP----VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY  235 (521)
Q Consensus       160 ~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~  235 (521)
                      ++||+||||||+||++   +.++.+||+|||++........    .....||+.|+|||++.+..++.++||||||+++|
T Consensus       144 ~~~i~H~dikp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~  220 (302)
T 4e5w_A          144 SRQYVHRDLAARNVLV---ESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLH  220 (302)
T ss_dssp             HTTEECSCCSGGGEEE---EETTEEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHH
T ss_pred             cCCcccCCCchheEEE---cCCCCEEECcccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHH
Confidence            9999999999999999   5667899999999986544322    23446888999999999889999999999999999


Q ss_pred             HHHhCCCCCCCCC---------------cHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          236 ILLSGYPPFIAQS---------------NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       236 ~ll~g~~pf~~~~---------------~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      +|++|..|+....               .......+..+...   +.+..+|+.+.+||.+||..||.+|||+.++++
T Consensus       221 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  295 (302)
T 4e5w_A          221 ELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRL---PCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIE  295 (302)
T ss_dssp             HHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTTCCC---CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred             HHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhccCCC---CCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence            9999999863221               11122222222211   123568999999999999999999999999986

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.1e-43  Score=350.43  Aligned_cols=255  Identities=27%  Similarity=0.353  Sum_probs=209.9

Q ss_pred             ccccceeecccccccCceEEEEeEEccCC--CcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCG--ETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALL   84 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~--~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (521)
                      ...++|++.+.||+|+||.||+|.++..+  .+..||||++.....                           ......+
T Consensus        41 i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~---------------------------~~~~~~~   93 (333)
T 1mqb_A           41 IHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYT---------------------------EKQRVDF   93 (333)
T ss_dssp             CCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCC---------------------------HHHHHHH
T ss_pred             CChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCC---------------------------HHHHHHH
Confidence            34578999999999999999999987521  234699999864211                           1223457


Q ss_pred             HHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 009980           85 TNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQANI  163 (521)
Q Consensus        85 ~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~~~i  163 (521)
                      .+|+.+++++     +||||+++++++...+..|+||||+.||+|.+++... +.+++..+..++.||+.||.|||++||
T Consensus        94 ~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i  168 (333)
T 1mqb_A           94 LGEAGIMGQF-----SHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNY  168 (333)
T ss_dssp             HHHHHHHHTC-----CCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHhC-----CCCCCCcEEEEEecCCCcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            8899999988     9999999999999999999999999999999999764 679999999999999999999999999


Q ss_pred             eeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC----cccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh
Q 009980          164 VHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP----VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS  239 (521)
Q Consensus       164 ~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~  239 (521)
                      +||||||+||++   +.++.+||+|||+++.......    .....+|+.|+|||++.+..++.++|||||||++|+|++
T Consensus       169 vH~Dikp~NIl~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt  245 (333)
T 1mqb_A          169 VHRDLAARNILV---NSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMT  245 (333)
T ss_dssp             CCSCCCGGGEEE---CTTCCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHT
T ss_pred             eCCCCChheEEE---CCCCcEEECCCCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHc
Confidence            999999999999   7788999999999986543211    122346788999999998899999999999999999999


Q ss_pred             -CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          240 -GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       240 -g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                       |..||.+.+..+....+..+.....   ...+++.+.+++.+||..||.+|||+.+++++
T Consensus       246 ~g~~pf~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  303 (333)
T 1mqb_A          246 YGERPYWELSNHEVMKAINDGFRLPT---PMDCPSAIYQLMMQCWQQERARRPKFADIVSI  303 (333)
T ss_dssp             TSCCTTTTCCHHHHHHHHHTTCCCCC---CTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             CCCCCcccCCHHHHHHHHHCCCcCCC---cccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence             9999999888888877776633221   24689999999999999999999999999873

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=100.00  E-value=5.5e-44  Score=355.52  Aligned_cols=248  Identities=15%  Similarity=0.202  Sum_probs=202.9

Q ss_pred             ccceeecccccccCceEEEEeEEccCC------CcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCG------ETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDA   82 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~------~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (521)
                      .++|++.+.||+|+||.||+|+++.++      .++.||||++...                                 .
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~---------------------------------~   87 (352)
T 2jii_A           41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD---------------------------------G   87 (352)
T ss_dssp             SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT---------------------------------S
T ss_pred             CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc---------------------------------c
Confidence            579999999999999999999998632      2788999998642                                 2


Q ss_pred             HHHHHHHHHHHHhhccCCCCCccc---------------eeEEEEe-CCeEEEEEeccCCCchHHHHHhc--CCCCHHHH
Q 009980           83 LLTNEILVMRKIVENVSPHPNVID---------------LYDVYED-QNGVHLILELCSGGELFDRIVAQ--ERYMEVGA  144 (521)
Q Consensus        83 ~~~~E~~~l~~l~~~~~~hpniv~---------------~~~~~~~-~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~  144 (521)
                      .+.+|+.+++++     .||||++               +++++.. ++..|+||||+ |++|.+++...  ..+++..+
T Consensus        88 ~~~~E~~~l~~l-----~h~niv~~~~~~~~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~  161 (352)
T 2jii_A           88 RLFNEQNFFQRA-----AKPLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSV  161 (352)
T ss_dssp             THHHHHHHHHHH-----CCHHHHHHHHHHTTCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHH
T ss_pred             hHHHHHHHHHHh-----cccchhhhhhhhccCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHH
Confidence            378999999999     8999887               6777776 78899999999 99999999876  78999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCeeccCCCCcEEEeeCCCCC--CEEEeecCCCccCCCCC--------CcccccCCccccccc
Q 009980          145 AAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDS--PLKIMDFGLSSVEGYTD--------PVVGLFGSIDYVSPE  214 (521)
Q Consensus       145 ~~i~~qil~al~~lH~~~i~H~dlkp~Nil~~~~~~~~--~~kl~Dfg~a~~~~~~~--------~~~~~~gt~~y~aPE  214 (521)
                      ..++.||+.||.|||++||+||||||+||++   +.++  .+||+|||+++......        ......||+.|+|||
T Consensus       162 ~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~---~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  238 (352)
T 2jii_A          162 LQVACRLLDALEFLHENEYVHGNVTAENIFV---DPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMD  238 (352)
T ss_dssp             HHHHHHHHHHHHHHHHTTCBCSCCCGGGEEE---ETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHH
T ss_pred             HHHHHHHHHHHHHHHhCCccCCCCCHHHEEE---cCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHH
Confidence            9999999999999999999999999999999   5555  89999999997643221        123347999999999


Q ss_pred             ccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCC--cHHHHHHH---HcCCCCCc--hhhhhccCHHHHHHHHHhccCCC
Q 009980          215 ALLQDRITSKSDMWSLGVILYILLSGYPPFIAQS--NRQKQQMI---MAGEFSFY--EQTWKNISSSAKQLISSLLTVDP  287 (521)
Q Consensus       215 ~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~--~~~~~~~i---~~~~~~~~--~~~~~~~s~~~~~li~~~l~~dp  287 (521)
                      ++.+..++.++|||||||++|+|++|..||.+..  ........   ......+.  ...|..+|+++.+||.+||..||
T Consensus       239 ~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp  318 (352)
T 2jii_A          239 LHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTY  318 (352)
T ss_dssp             HHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCT
T ss_pred             HHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCCh
Confidence            9999899999999999999999999999998764  22222222   22222211  12235689999999999999999


Q ss_pred             CCCCCHHHHHc
Q 009980          288 NRRPSAQELLN  298 (521)
Q Consensus       288 ~~R~t~~~~l~  298 (521)
                      .+|||+.++++
T Consensus       319 ~~Rps~~~l~~  329 (352)
T 2jii_A          319 EEKPPYAMLRN  329 (352)
T ss_dssp             TCCCCHHHHHH
T ss_pred             hhCCCHHHHHH
Confidence            99999999986

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=100.00  E-value=5.2e-44  Score=367.49  Aligned_cols=249  Identities=26%  Similarity=0.358  Sum_probs=213.5

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      +...++|++.+.||+|+||.||+|.++   .+..||||+++...                             .....+.
T Consensus       184 ~i~~~~~~~~~~lG~G~fg~V~~~~~~---~~~~vavK~~~~~~-----------------------------~~~~~~~  231 (454)
T 1qcf_A          184 EIPRESLKLEKKLGAGQFGEVWMATYN---KHTKVAVKTMKPGS-----------------------------MSVEAFL  231 (454)
T ss_dssp             BCCGGGEEEEEEEECCSSEEEEEEEET---TTEEEEEEEECTTS-----------------------------BCHHHHH
T ss_pred             eechHHeEEEEEcccCCceEEEEEEEC---CccEEEEEEecCCC-----------------------------ccHHHHH
Confidence            345678999999999999999999986   45679999986421                             1245688


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ--ERYMEVGAAAVIRQIAEGLAALHQANI  163 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~al~~lH~~~i  163 (521)
                      +|+.+++++     +||||+++++++. .+..|+|||||.||+|.+++...  ..+++..+..++.||+.||.|||++||
T Consensus       232 ~E~~~l~~l-----~h~~iv~l~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i  305 (454)
T 1qcf_A          232 AEANVMKTL-----QHDKLVKLHAVVT-KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNY  305 (454)
T ss_dssp             HHHHHHTTC-----CCTTBCCEEEEEC-SSSCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHhhC-----CCCCEeeEEEEEe-CCccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            999999998     9999999999986 66789999999999999999754  368999999999999999999999999


Q ss_pred             eeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC--CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-C
Q 009980          164 VHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD--PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-G  240 (521)
Q Consensus       164 ~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g  240 (521)
                      +||||||+|||+   +.++.+||+|||+|+......  ......+|+.|+|||++....++.++|||||||++|+|++ |
T Consensus       306 vHrDlkp~Nill---~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g  382 (454)
T 1qcf_A          306 IHRDLRAANILV---SASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYG  382 (454)
T ss_dssp             CCSSCSGGGEEE---CTTCCEEECSTTGGGGBCCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred             cCCCCCHHHEEE---CCCCcEEEeeCCCceEcCCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCC
Confidence            999999999999   778899999999998654221  1223346788999999998899999999999999999999 9


Q ss_pred             CCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          241 YPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       241 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      .+||.+.+..+....+..+....   ....+|+++.+||.+||..||.+|||+.+++.
T Consensus       383 ~~P~~~~~~~~~~~~i~~~~~~~---~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~  437 (454)
T 1qcf_A          383 RIPYPGMSNPEVIRALERGYRMP---RPENCPEELYNIMMRCWKNRPEERPTFEYIQS  437 (454)
T ss_dssp             CCSSTTCCHHHHHHHHHHTCCCC---CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHcCCCCC---CCCCCCHHHHHHHHHHccCChhHCcCHHHHHH
Confidence            99999998888888877663322   23568999999999999999999999999986

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=100.00  E-value=6.3e-44  Score=347.20  Aligned_cols=252  Identities=21%  Similarity=0.357  Sum_probs=198.2

Q ss_pred             ccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHH
Q 009980            5 TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALL   84 (521)
Q Consensus         5 ~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (521)
                      .+.+.++|++.+.||+|+||+||+|++    +++.||||++...                               .....
T Consensus         3 ~~~~~~~y~~~~~lg~G~~g~V~~~~~----~~~~vavK~~~~~-------------------------------~~~~~   47 (301)
T 3q4u_A            3 QRTVARDITLLECVGKGRYGEVWRGSW----QGENVAVKIFSSR-------------------------------DEKSW   47 (301)
T ss_dssp             -CCCGGGCEEEEEEEECSSEEEEEEEE----TTEEEEEEEECGG-------------------------------GHHHH
T ss_pred             cccccCcEEEEEeeccCCCcEEEEEEE----CCEEEEEEEeccc-------------------------------cchhh
Confidence            356789999999999999999999987    4678999998531                               12335


Q ss_pred             HHHHHHHHHHhhccCCCCCccceeEEEEeC----CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-
Q 009980           85 TNEILVMRKIVENVSPHPNVIDLYDVYEDQ----NGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALH-  159 (521)
Q Consensus        85 ~~E~~~l~~l~~~~~~hpniv~~~~~~~~~----~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH-  159 (521)
                      ..|.+++...   ..+||||+++++++...    ..+|+||||++||+|.+++.. ..+++..+..++.||+.||.||| 
T Consensus        48 ~~e~~~~~~~---~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~~i~~~l~~lH~  123 (301)
T 3q4u_A           48 FRETELYNTV---MLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQL-TTLDTVSCLRIVLSIASGLAHLHI  123 (301)
T ss_dssp             HHHHHHHHHT---CCCCTTBCCEEEEEEEEETTEEEEEEEECCCTTCBHHHHHTT-CCBCHHHHHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHh---hccCcCeeeEEEeeccccCCCceeEEehhhccCCCHHHHHhh-cccCHHHHHHHHHHHHHHHHHHHH
Confidence            5666666652   12899999999986543    468999999999999999854 57999999999999999999999 


Q ss_pred             -------HCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC-----cccccCCcccccccccccC------CC
Q 009980          160 -------QANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP-----VVGLFGSIDYVSPEALLQD------RI  221 (521)
Q Consensus       160 -------~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~------~~  221 (521)
                             ++||+||||||+|||+   +.++.+||+|||+|+.......     .....||+.|+|||++.+.      .+
T Consensus       124 ~~~~~~~~~~ivH~Dlkp~Nill---~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (301)
T 3q4u_A          124 EIFGTQGKPAIAHRDLKSKNILV---KKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDS  200 (301)
T ss_dssp             CBCSTTCBCEEECSCCCGGGEEE---CTTSCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHH
T ss_pred             hhhhccCCCCeecCCCChHhEEE---cCCCCEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccC
Confidence                   9999999999999999   7788999999999975433222     2234799999999999876      45


Q ss_pred             CchhhhHHHHHHHHHHHhC----------CCCCCCCCc----HHHHHHHHcCCC---CCchh-hhhccCHHHHHHHHHhc
Q 009980          222 TSKSDMWSLGVILYILLSG----------YPPFIAQSN----RQKQQMIMAGEF---SFYEQ-TWKNISSSAKQLISSLL  283 (521)
Q Consensus       222 ~~~~DiwslG~il~~ll~g----------~~pf~~~~~----~~~~~~i~~~~~---~~~~~-~~~~~s~~~~~li~~~l  283 (521)
                      +.++||||+||++|+|++|          .+||.....    ............   ..+.. ....+++.+.+|+.+||
T Consensus       201 ~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl  280 (301)
T 3q4u_A          201 YKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECW  280 (301)
T ss_dssp             HHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHC
T ss_pred             CchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHh
Confidence            5799999999999999999          889855322    222233222211   11111 11336788999999999


Q ss_pred             cCCCCCCCCHHHHHc
Q 009980          284 TVDPNRRPSAQELLN  298 (521)
Q Consensus       284 ~~dp~~R~t~~~~l~  298 (521)
                      ..||.+|||+.++++
T Consensus       281 ~~dP~~Rps~~~i~~  295 (301)
T 3q4u_A          281 YQNPSARLTALRIKK  295 (301)
T ss_dssp             CSSGGGSCCHHHHHH
T ss_pred             hcChhhCCCHHHHHH
Confidence            999999999999986

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=100.00  E-value=1.1e-44  Score=356.69  Aligned_cols=262  Identities=23%  Similarity=0.318  Sum_probs=209.0

Q ss_pred             cccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHH
Q 009980            4 ETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDAL   83 (521)
Q Consensus         4 ~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (521)
                      +.....++|++.+.||+|+||.||+|.++   +++.||||++.......                           ....
T Consensus        24 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~---------------------------~~~~   73 (326)
T 3uim_A           24 ELQVASDNFSNKNILGRGGFGKVYKGRLA---DGTLVAVKRLKEERTQG---------------------------GELQ   73 (326)
T ss_dssp             HHHTTTTSSCSTTEEECCSSSEEEEECCS---SSCCEEEEECCC--------------------------------CCCH
T ss_pred             HHHHHhhccccceeEecCCCcEEEEEEec---CCCEEEEEEeccccCch---------------------------HHHH
Confidence            34556789999999999999999999864   57889999986533211                           1124


Q ss_pred             HHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH
Q 009980           84 LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE----RYMEVGAAAVIRQIAEGLAALH  159 (521)
Q Consensus        84 ~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~----~~~~~~~~~i~~qil~al~~lH  159 (521)
                      +.+|+.+++++     .||||+++++++.+++..++||||+.||+|.+++....    .+++..+..++.|++.||.|||
T Consensus        74 ~~~e~~~l~~l-----~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH  148 (326)
T 3uim_A           74 FQTEVEMISMA-----VHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLH  148 (326)
T ss_dssp             HHHHHHGGGTC-----CCTTBCCCCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhc-----cCCCccceEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            78899998887     89999999999999999999999999999999997643    4999999999999999999999


Q ss_pred             HC---CCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC--cccccCCcccccccccccCCCCchhhhHHHHHHH
Q 009980          160 QA---NIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP--VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVIL  234 (521)
Q Consensus       160 ~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il  234 (521)
                      ++   ||+||||||+|||+   +.++.+||+|||++........  .....||+.|+|||++.+..++.++|||||||++
T Consensus       149 ~~~~~~ivH~Dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il  225 (326)
T 3uim_A          149 DHCDPKIIHRDVKAANILL---DEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVML  225 (326)
T ss_dssp             HSSSSCEECCCCSGGGEEE---CTTCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHH
T ss_pred             hCCCCCeEeCCCchhhEEE---CCCCCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHH
Confidence            99   99999999999999   7788999999999986543322  2344699999999999988999999999999999


Q ss_pred             HHHHhCCCCCCCC----CcHHHHHHHHcCCCC-----------CchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          235 YILLSGYPPFIAQ----SNRQKQQMIMAGEFS-----------FYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       235 ~~ll~g~~pf~~~----~~~~~~~~i~~~~~~-----------~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      |+|++|..||...    ...........+...           .........++.+.+++.+||..||.+|||+.++++|
T Consensus       226 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~  305 (326)
T 3uim_A          226 LELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRM  305 (326)
T ss_dssp             HHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHH
T ss_pred             HHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHH
Confidence            9999999999521    111111111111110           0111123355789999999999999999999999998


Q ss_pred             Cccc
Q 009980          300 PWVI  303 (521)
Q Consensus       300 ~~~~  303 (521)
                      .+-.
T Consensus       306 L~~~  309 (326)
T 3uim_A          306 LEGD  309 (326)
T ss_dssp             HHTS
T ss_pred             hcCc
Confidence            7644

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=100.00  E-value=4.1e-44  Score=353.79  Aligned_cols=257  Identities=22%  Similarity=0.356  Sum_probs=212.3

Q ss_pred             cccccceeecccccccCceEEEEeEEccCC---CcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCG---ETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDA   82 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (521)
                      +...++|++.+.||+|+||.||+|.+...+   ....||+|++.....                           .....
T Consensus        42 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---------------------------~~~~~   94 (333)
T 2i1m_A           42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH---------------------------ADEKE   94 (333)
T ss_dssp             BCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCC---------------------------HHHHH
T ss_pred             cCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccC---------------------------hHHHH
Confidence            345678999999999999999999987622   224799999864221                           12235


Q ss_pred             HHHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc--------------CCCCHHHHHHHH
Q 009980           83 LLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ--------------ERYMEVGAAAVI  148 (521)
Q Consensus        83 ~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~--------------~~~~~~~~~~i~  148 (521)
                      .+.+|+.+++++    .+||||+++++++...+.+|+||||++||+|.+++...              ..+++..+..++
T Consensus        95 ~~~~E~~~l~~l----~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (333)
T 2i1m_A           95 ALMSELKIMSHL----GQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFS  170 (333)
T ss_dssp             HHHHHHHHHHHH----CCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHH
T ss_pred             HHHHHHHHHHhh----cCCCCeeeEEEEEecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHH
Confidence            588999999988    47999999999999999999999999999999998753              457999999999


Q ss_pred             HHHHHHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC---cccccCCcccccccccccCCCCchh
Q 009980          149 RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALLQDRITSKS  225 (521)
Q Consensus       149 ~qil~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~  225 (521)
                      .||+.||.|||++||+||||||+||++   +.++.+||+|||++........   .....||+.|+|||++.+..++.++
T Consensus       171 ~qi~~~l~~lH~~~ivH~Dlkp~NIl~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  247 (333)
T 2i1m_A          171 SQVAQGMAFLASKNCIHRDVAARNVLL---TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQS  247 (333)
T ss_dssp             HHHHHHHHHHHHTTEECSCCSGGGCEE---EGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHH
T ss_pred             HHHHHHHHHHhcCCcccCCcccceEEE---CCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHH
Confidence            999999999999999999999999999   5677899999999975432221   2234578899999999988999999


Q ss_pred             hhHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          226 DMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       226 DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      |||||||++|+|++ |.+||.+.........+.........  ...+|+.+.++|.+||..||.+|||+.++++
T Consensus       248 Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  319 (333)
T 2i1m_A          248 DVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQ--PAFAPKNIYSIMQACWALEPTHRPTFQQICS  319 (333)
T ss_dssp             HHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHHHHTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCCCCcccchhHHHHHHHhcCCCCCC--CCCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence            99999999999998 99999887765555554444333222  2457899999999999999999999999987

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=100.00  E-value=2e-44  Score=357.60  Aligned_cols=266  Identities=16%  Similarity=0.171  Sum_probs=197.7

Q ss_pred             cccceeecccccccCceEEEEeEEccC-CCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccc-cccccHHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTC-GETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRK-QVSVSDALLT   85 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~   85 (521)
                      ..++|++.+.||+|+||.||+|+++.. .++..||||++.......                  ..+.. ........+.
T Consensus        35 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~------------------~~e~~~~~~~~~~~~~   96 (345)
T 2v62_A           35 EGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPL------------------FSELKFYQRVAKKDCI   96 (345)
T ss_dssp             TSCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHH------------------HHHHHHHHHHCCHHHH
T ss_pred             cCceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcch------------------HHHHHHHHHHhhhHHH
Confidence            457999999999999999999999741 246789999987532100                  00000 0001122355


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEe----CCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYED----QNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQA  161 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~----~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~  161 (521)
                      +|+..++.+     +||||+++++++..    ....|+||||+ |++|.+++...+.+++..+..++.||+.||.|||++
T Consensus        97 ~e~~~~~~l-----~h~ni~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~  170 (345)
T 2v62_A           97 KKWIERKQL-----DYLGIPLFYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHEN  170 (345)
T ss_dssp             HHHHHHHTC-----SCCCCCCEEEEEEEESSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHhhccc-----cccCcceeecccccccCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            666667666     99999999999988    78899999999 999999998878899999999999999999999999


Q ss_pred             CCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC--------CcccccCCcccccccccccCCCCchhhhHHHHHH
Q 009980          162 NIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD--------PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVI  233 (521)
Q Consensus       162 ~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i  233 (521)
                      ||+||||||+|||+..+ ..+.+||+|||+|+......        ......||+.|+|||++.+..++.++|||||||+
T Consensus       171 ~ivH~Dlkp~NIll~~~-~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~i  249 (345)
T 2v62_A          171 EYVHGDIKAANLLLGYK-NPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYC  249 (345)
T ss_dssp             TEECSCCSGGGEEEESS-STTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHH
T ss_pred             CeeCCCcCHHHEEEccC-CCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHH
Confidence            99999999999999432 22389999999997543221        1244579999999999999899999999999999


Q ss_pred             HHHHHhCCCCCCCCC--cHHHHHHHHcCCCCCchhh---h--hccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          234 LYILLSGYPPFIAQS--NRQKQQMIMAGEFSFYEQT---W--KNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       234 l~~ll~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~---~--~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      +|+|++|..||.+..  ...............+...   .  ..+|++++++|.+||..||.+|||+.++++
T Consensus       250 l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  321 (345)
T 2v62_A          250 MLRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKK  321 (345)
T ss_dssp             HHHHHHSSCTTGGGTTCHHHHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             HHHHHhCCCCccccccccHHHHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence            999999999996532  2222211111111111111   1  168999999999999999999999999987

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=100.00  E-value=3.8e-45  Score=383.94  Aligned_cols=263  Identities=26%  Similarity=0.406  Sum_probs=209.7

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      ...++|++.+.||+|+||.||+|.++.  +++.||||++.....                           ......+.+
T Consensus        11 ~~~grY~i~~~LG~G~fG~Vyla~~~~--tg~~VAVKvi~~~~~---------------------------~~~~~~~~~   61 (676)
T 3qa8_A           11 QTCGPWEMKERLGTGGFGYVLRWIHQD--TGEQVAIKQCRQELS---------------------------PKNRERWCL   61 (676)
T ss_dssp             ------CCCCCCCBCSSSBCCCCCCTT--TTCCEEECCCCSCCC---------------------------HHHHHHHHH
T ss_pred             CCCCCeEEEEEEeeCCCeEEEEEEECC--CCcEEEEEEecccCC---------------------------HHHHHHHHH
Confidence            445899999999999999999999987  788999999854211                           122455888


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEe------CCeEEEEEeccCCCchHHHHHhcC---CCCHHHHHHHHHHHHHHHHH
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYED------QNGVHLILELCSGGELFDRIVAQE---RYMEVGAAAVIRQIAEGLAA  157 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~------~~~~~lv~e~~~gg~L~~~l~~~~---~~~~~~~~~i~~qil~al~~  157 (521)
                      |+.+++++     +||||+++++++..      .+..|+|||||+||+|.+++....   .+++..++.++.|++.||.|
T Consensus        62 Ei~iL~~L-----~HpnIV~l~~v~~~~~~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~y  136 (676)
T 3qa8_A           62 EIQIMKKL-----NHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRY  136 (676)
T ss_dssp             HHHHHHHC-----CBTTBCCEEECCTTTCCCCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhC-----CCCCCCceeeeecccccccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHH
Confidence            99999999     99999999999765      678899999999999999998654   58999999999999999999


Q ss_pred             HHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHH
Q 009980          158 LHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYIL  237 (521)
Q Consensus       158 lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l  237 (521)
                      ||++||+||||||+||++..++....+||+|||++.............||+.|+|||++.+..++.++||||+||++|+|
T Consensus       137 LHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeL  216 (676)
T 3qa8_A          137 LHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFEC  216 (676)
T ss_dssp             HHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHH
T ss_pred             HHHCCCccCCCCHHHeEeecCCCceeEEEcccccccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHH
Confidence            99999999999999999955444455999999999877655555667899999999999999999999999999999999


Q ss_pred             HhCCCCCCCCCcHHHH---------HH-----HHcCCC------CCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHH
Q 009980          238 LSGYPPFIAQSNRQKQ---------QM-----IMAGEF------SFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELL  297 (521)
Q Consensus       238 l~g~~pf~~~~~~~~~---------~~-----i~~~~~------~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l  297 (521)
                      ++|..||.+.......         ..     ...+..      +.+......+++.+.+||.+||..||.+|||+.+++
T Consensus       217 ltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL  296 (676)
T 3qa8_A          217 ITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNP  296 (676)
T ss_dssp             HSSCSSCCSSCHHHHSSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCC
T ss_pred             HHCCCCCCcccchhhhhhhhhcccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHh
Confidence            9999999765322110         00     001111      112223345788999999999999999999999999


Q ss_pred             cCCccc
Q 009980          298 NHPWVI  303 (521)
Q Consensus       298 ~h~~~~  303 (521)
                      +||||.
T Consensus       297 ~hp~F~  302 (676)
T 3qa8_A          297 NVGCFQ  302 (676)
T ss_dssp             CCTTHH
T ss_pred             cCHHHH
Confidence            999986

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=100.00  E-value=4.6e-43  Score=360.63  Aligned_cols=256  Identities=20%  Similarity=0.252  Sum_probs=211.0

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      ..+.++|++++.||+|+||.||+|++..  +++.||||++......                              ..+.
T Consensus         3 ~~i~~~y~i~~~LG~G~fG~Vy~a~~~~--~~~~vAvK~~~~~~~~------------------------------~~~~   50 (483)
T 3sv0_A            3 PRVGNKFRLGRKIGSGSFGEIYLGTNIQ--TNEEVAIKLENVKTKH------------------------------PQLL   50 (483)
T ss_dssp             CEETTTEECCCCCEECSSCEEEEEEETT--TCCEEEEEEEETTCSS------------------------------CCHH
T ss_pred             CCcCCcEEEEEEEeeCCCEEEEEEEECC--CCcEEEEEEecccccc------------------------------HHHH
Confidence            3577899999999999999999999987  7889999998653221                              2377


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQANIV  164 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~al~~lH~~~i~  164 (521)
                      .|+.+++.+    ..|++|+.+..++...+..||||||+ |++|.+++.. ...+++..+..|+.||+.||.|||++||+
T Consensus        51 ~E~~il~~L----~~~~~i~~i~~~~~~~~~~~lvme~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIv  125 (483)
T 3sv0_A           51 YESKIYRIL----QGGTGIPNVRWFGVEGDYNVLVMDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFL  125 (483)
T ss_dssp             HHHHHHHHT----TTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHh----cCCCCCCeEEEEEeeCCEEEEEEECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence            899999988    24467777777788889999999999 9999999975 56799999999999999999999999999


Q ss_pred             eccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC--------cccccCCcccccccccccCCCCchhhhHHHHHHHHH
Q 009980          165 HRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP--------VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYI  236 (521)
Q Consensus       165 H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~--------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~  236 (521)
                      ||||||+|||+...+..+.+||+|||+|+.......        .....||+.|+|||++.+..++.++|||||||++|+
T Consensus       126 HrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~e  205 (483)
T 3sv0_A          126 HRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMY  205 (483)
T ss_dssp             CCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred             ecccCcceEEEecCCCCCeEEEEeCCcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHH
Confidence            999999999995545678899999999976443221        125679999999999999999999999999999999


Q ss_pred             HHhCCCCCCCCCcH---HHHHHHHcCCC-CCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          237 LLSGYPPFIAQSNR---QKQQMIMAGEF-SFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       237 ll~g~~pf~~~~~~---~~~~~i~~~~~-~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      |++|..||.+....   +.+..+..... .........++.++.+||.+||..+|.+||++.++++
T Consensus       206 lltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~  271 (483)
T 3sv0_A          206 FLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKR  271 (483)
T ss_dssp             HHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             HHhCCCCCccccchhHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            99999999875542   23333332222 1223344678999999999999999999999998775

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=100.00  E-value=5.4e-44  Score=350.39  Aligned_cols=253  Identities=26%  Similarity=0.354  Sum_probs=203.6

Q ss_pred             cccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      -.++|++.+.||+|+||.||+|+++.  +++.||||++.....                            .....+.+|
T Consensus        27 ~~~~y~~~~~lg~G~~g~V~~~~~~~--~~~~vavK~~~~~~~----------------------------~~~~~~~~E   76 (317)
T 2buj_A           27 DNKHYLFIQKLGEGGFSYVDLVEGLH--DGHFYALKRILCHEQ----------------------------QDREEAQRE   76 (317)
T ss_dssp             TTEEEEEEEEEEC--CEEEEEEEETT--TCCEEEEEEEEESSH----------------------------HHHHHHHHH
T ss_pred             CCeEEEEEEEecCCCCeEEEEEEecC--CCcEEEEEEEecCCH----------------------------HHHHHHHHH
Confidence            35789999999999999999999987  789999999864211                            234557889


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEe----CCeEEEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYED----QNGVHLILELCSGGELFDRIVA----QERYMEVGAAAVIRQIAEGLAALH  159 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~----~~~~~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qil~al~~lH  159 (521)
                      +.+++++     +||||+++++++..    ....|+||||+.+|+|.+++..    ...+++..+..++.||+.||.|||
T Consensus        77 ~~~l~~l-----~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH  151 (317)
T 2buj_A           77 ADMHRLF-----NHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH  151 (317)
T ss_dssp             HHHHHTC-----CCTTBCCCCEEEEEEETTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhhc-----CCCCeeeEEEEEEeccCCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            9999988     99999999999873    3478999999999999998875    467999999999999999999999


Q ss_pred             HCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC----------cccccCCcccccccccccCC---CCchhh
Q 009980          160 QANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP----------VVGLFGSIDYVSPEALLQDR---ITSKSD  226 (521)
Q Consensus       160 ~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~----------~~~~~gt~~y~aPE~~~~~~---~~~~~D  226 (521)
                      ++||+||||||+||++   +.++.+||+|||++........          .....||+.|+|||++.+..   ++.++|
T Consensus       152 ~~~ivH~dlkp~NIl~---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~D  228 (317)
T 2buj_A          152 AKGYAHRDLKPTNILL---GDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTD  228 (317)
T ss_dssp             HTTEECCCCCGGGEEE---CTTSCEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHH
T ss_pred             hCCcccCCCCHHHEEE---cCCCCEEEEecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhh
Confidence            9999999999999999   7788999999999875432111          12235799999999987554   688999


Q ss_pred             hHHHHHHHHHHHhCCCCCCCCC--cHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCc
Q 009980          227 MWSLGVILYILLSGYPPFIAQS--NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPW  301 (521)
Q Consensus       227 iwslG~il~~ll~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~  301 (521)
                      |||||+++|+|++|..||....  .......+.. ....+  ....+|+.+.++|.+||..||.+|||+.+++++-.
T Consensus       229 i~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~  302 (317)
T 2buj_A          229 VWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQN-QLSIP--QSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLE  302 (317)
T ss_dssp             HHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHC-C--CC--CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCChhhhhcccchhhHHhhc-cCCCC--ccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhh
Confidence            9999999999999999995421  1112222222 22222  22568999999999999999999999999998654

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=100.00  E-value=1e-43  Score=341.64  Aligned_cols=245  Identities=25%  Similarity=0.376  Sum_probs=203.1

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      .-.++|++.+.||+|+||.||+|.+    +++.||||++....                              ....+.+
T Consensus        18 ~~~~~y~~~~~lg~G~~g~V~~~~~----~~~~vavK~~~~~~------------------------------~~~~~~~   63 (278)
T 1byg_A           18 LNMKELKLLQTIGKGEFGDVMLGDY----RGNKVAVKCIKNDA------------------------------TAQAFLA   63 (278)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEE----TTEEEEEEECCCCC--------------------------------HHHHH
T ss_pred             CChhhceEEeEEecCCCceEEEEEE----cCCEEEEEEecchh------------------------------HHHHHHH
Confidence            3457999999999999999999987    46789999985321                              1345788


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeC-CeEEEEEeccCCCchHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCC
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQ-NGVHLILELCSGGELFDRIVAQER--YMEVGAAAVIRQIAEGLAALHQANI  163 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~-~~~~lv~e~~~gg~L~~~l~~~~~--~~~~~~~~i~~qil~al~~lH~~~i  163 (521)
                      |+.+++++     +||||+++++++... +..|+||||++|++|.+++...+.  +++..+..++.|++.||.|||++||
T Consensus        64 E~~~l~~l-----~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i  138 (278)
T 1byg_A           64 EASVMTQL-----RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF  138 (278)
T ss_dssp             THHHHTTC-----CCTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHhC-----CCCCEeeEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            99999988     999999999997544 579999999999999999976543  8999999999999999999999999


Q ss_pred             eeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CCC
Q 009980          164 VHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYP  242 (521)
Q Consensus       164 ~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~  242 (521)
                      +||||||+||++   +.++.+||+|||++......  .....+++.|+|||++.+..++.++||||||+++|+|++ |.+
T Consensus       139 ~H~dlkp~Nil~---~~~~~~~l~Dfg~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~  213 (278)
T 1byg_A          139 VHRDLAARNVLV---SEDNVAKVSDFGLTKEASST--QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRV  213 (278)
T ss_dssp             CCSCCSGGGEEE---CTTSCEEECCCCC--------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             cccCCCcceEEE---eCCCcEEEeecccccccccc--ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCC
Confidence            999999999999   77889999999999765432  223457899999999998899999999999999999998 999


Q ss_pred             CCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          243 PFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       243 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      ||...+..+....+..+...   .....+|+.+.++|.+||..||.+|||+.++++
T Consensus       214 p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  266 (278)
T 1byg_A          214 PYPRIPLKDVVPRVEKGYKM---DAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLRE  266 (278)
T ss_dssp             SCTTSCGGGHHHHHTTTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCCCHHHHHHHHhcCCCC---CCcccCCHHHHHHHHHHhcCChhhCCCHHHHHH
Confidence            99988887777776655322   223568999999999999999999999999986

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=100.00  E-value=6.2e-44  Score=345.46  Aligned_cols=256  Identities=25%  Similarity=0.364  Sum_probs=206.3

Q ss_pred             ccccceeecccccccCceEEEEeEEcc-CCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKT-CGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~-~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      ...++|++.+.||+|+||.||+|++.. .+.+..||||+++......                         ......+.
T Consensus        15 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-------------------------~~~~~~~~   69 (291)
T 1u46_A           15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQ-------------------------PEAMDDFI   69 (291)
T ss_dssp             CCGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC---------------------------------CHHHHHHH
T ss_pred             cchhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCC-------------------------HHHHHHHH
Confidence            346799999999999999999998653 2234479999986532211                         12345688


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQANIV  164 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~~~i~  164 (521)
                      +|+.+++++     +||||+++++++.++. .++||||+.+++|.+++... +.+++..+..++.||+.||.|||++||+
T Consensus        70 ~e~~~l~~l-----~h~~i~~~~~~~~~~~-~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~  143 (291)
T 1u46_A           70 REVNAMHSL-----DHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFI  143 (291)
T ss_dssp             HHHHHHHHC-----CCTTBCCEEEEECSSS-CEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHhC-----CCCCcccEEEEEccCC-ceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence            999999998     9999999999998765 88999999999999998764 5699999999999999999999999999


Q ss_pred             eccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC----cccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-
Q 009980          165 HRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP----VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-  239 (521)
Q Consensus       165 H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-  239 (521)
                      ||||||+||++   +.++.+||+|||++........    .....+|+.|+|||++.+..++.++||||||+++|+|++ 
T Consensus       144 H~dikp~Nili---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~  220 (291)
T 1u46_A          144 HRDLAARNLLL---ATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTY  220 (291)
T ss_dssp             CSCCCGGGEEE---EETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTT
T ss_pred             cCCCchheEEE---cCCCCEEEccccccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhC
Confidence            99999999999   5667899999999976543322    123457888999999998889999999999999999999 


Q ss_pred             CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          240 GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       240 g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      |.+||.+.+..+....+......++.  ...+|+.+.++|.+||..||.+|||+.++++
T Consensus       221 g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  277 (291)
T 1u46_A          221 GQEPWIGLNGSQILHKIDKEGERLPR--PEDCPQDIYNVMVQCWAHKPEDRPTFVALRD  277 (291)
T ss_dssp             SCCTTTTCCHHHHHHHHHTSCCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCcccCCHHHHHHHHHccCCCCCC--CcCcCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence            99999999888888887766544332  3568999999999999999999999999997

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=100.00  E-value=5.7e-44  Score=351.81  Aligned_cols=252  Identities=23%  Similarity=0.309  Sum_probs=206.3

Q ss_pred             ccceeecccccccCceEEEEeEEc--cCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKK--TCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      .++|++.+.||+|+||.||+|+..  ...+++.||||++.....                            .....+.+
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~----------------------------~~~~~~~~   73 (327)
T 3lxl_A           22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGP----------------------------DQQRDFQR   73 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCH----------------------------HHHHHHHH
T ss_pred             hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCH----------------------------HHHHHHHH
Confidence            479999999999999999999842  112788999999864211                            22345889


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEE--eCCeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYE--DQNGVHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQANI  163 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~--~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~al~~lH~~~i  163 (521)
                      |+.+++++     +||||+++++++.  +...+|+||||++|++|.+++.. ...+++..+..++.||+.||.|||++||
T Consensus        74 E~~~l~~l-----~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i  148 (327)
T 3lxl_A           74 EIQILKAL-----HSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRC  148 (327)
T ss_dssp             HHHHHHTC-----CCTTBCCEEEEEECSSSCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHhc-----CCCceeEEEEEEecCCCceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            99999998     9999999999987  45679999999999999999976 4569999999999999999999999999


Q ss_pred             eeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC----cccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh
Q 009980          164 VHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP----VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS  239 (521)
Q Consensus       164 ~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~  239 (521)
                      +||||||+||++   +.++.+||+|||++........    .....||+.|+|||++.+..++.++||||||+++|+|++
T Consensus       149 vH~Dikp~NIl~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~  225 (327)
T 3lxl_A          149 VHRDLAARNILV---ESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT  225 (327)
T ss_dssp             ECSCCSGGGEEE---EETTEEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHT
T ss_pred             cCCCCChhhEEE---CCCCCEEEcccccceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHh
Confidence            999999999999   5677899999999986543321    223458889999999998889999999999999999999


Q ss_pred             CCCCCCCCCcH---------------HHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          240 GYPPFIAQSNR---------------QKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       240 g~~pf~~~~~~---------------~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      |..||......               .....+..+...   .....+|+.+.+||.+||..||.+|||+.+++++
T Consensus       226 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  297 (327)
T 3lxl_A          226 YCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRL---PAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQ  297 (327)
T ss_dssp             TTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCCccccchhhhhcccccccccHHHHHHHhhcccCC---CCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            99998654332               122222222211   1235689999999999999999999999999764

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=100.00  E-value=1.4e-43  Score=344.22  Aligned_cols=254  Identities=24%  Similarity=0.395  Sum_probs=210.0

Q ss_pred             ccccceeecccccccCceEEEEeEEccC-CCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTC-GETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      ....+|++.+.||+|+||.||+|++... +....||+|.+.....                           ......+.
T Consensus        22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~---------------------------~~~~~~~~   74 (298)
T 3f66_A           22 PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD---------------------------IGEVSQFL   74 (298)
T ss_dssp             GGGEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCS---------------------------HHHHHHHH
T ss_pred             ccceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCC---------------------------HHHHHHHH
Confidence            3456899999999999999999997642 2334689999864211                           12234578


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEE-EeCCeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVY-EDQNGVHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQANI  163 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~-~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~al~~lH~~~i  163 (521)
                      +|+.+++++     +||||+++++++ ..++..|+||||+.||+|.+++.. ...+++..+..++.|++.||.|||++||
T Consensus        75 ~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i  149 (298)
T 3f66_A           75 TEGIIMKDF-----SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKF  149 (298)
T ss_dssp             HHHHHHHTC-----CCTTBCCCCEEECCSSSCCEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHhC-----CCCCEeeeeeEEEcCCCceEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            899999998     999999999985 556688999999999999999975 4568999999999999999999999999


Q ss_pred             eeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC-----CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHH
Q 009980          164 VHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD-----PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILL  238 (521)
Q Consensus       164 ~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll  238 (521)
                      +||||||+||++   +.++.+||+|||+++......     ......||+.|+|||.+.+..++.++||||||+++|+|+
T Consensus       150 ~H~dikp~Nil~---~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~  226 (298)
T 3f66_A          150 VHRDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM  226 (298)
T ss_dssp             CCSCCSGGGEEE---CTTCCEEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred             cCCCCchheEEE---CCCCCEEECcccccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHH
Confidence            999999999999   778899999999997653322     223346788999999999999999999999999999999


Q ss_pred             h-CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          239 S-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       239 ~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      + |.+||.+.+..+....+..+......   ..+|+.+.+++.+||..||.+|||+.++++
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~li~~~l~~~p~~Rps~~ell~  284 (298)
T 3f66_A          227 TRGAPPYPDVNTFDITVYLLQGRRLLQP---EYCPDPLYEVMLKCWHPKAEMRPSFSELVS  284 (298)
T ss_dssp             TTSCCSSTTSCTTTHHHHHHTTCCCCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hCCCCCCccCCHHHHHHHHhcCCCCCCC---ccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            9 77888888777777777776654432   457999999999999999999999999986

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=100.00  E-value=2.1e-43  Score=362.67  Aligned_cols=253  Identities=29%  Similarity=0.397  Sum_probs=211.1

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      ...++|++.+.||+|+||.||+|.++.   +..||||+++...                             .....+.+
T Consensus       181 i~~~~~~~~~~lG~G~fg~Vy~~~~~~---~~~vavK~~~~~~-----------------------------~~~~~~~~  228 (452)
T 1fmk_A          181 IPRESLRLEVKLGQGCFGEVWMGTWNG---TTRVAIKTLKPGT-----------------------------MSPEAFLQ  228 (452)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETT---TEEEEEEECCTTS-----------------------------SCHHHHHH
T ss_pred             cChhHceeeeeecCCCCeEEEEEEECC---CceEEEEEeccCC-----------------------------CCHHHHHH
Confidence            445789999999999999999999874   4579999986422                             12345889


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA--QERYMEVGAAAVIRQIAEGLAALHQANIV  164 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~--~~~~~~~~~~~i~~qil~al~~lH~~~i~  164 (521)
                      |+.+++++     +||||+++++++.+ +..|+||||+.||+|.+++..  ...+++..+..++.||+.||.|||++||+
T Consensus       229 E~~~l~~l-----~hp~iv~~~~~~~~-~~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iv  302 (452)
T 1fmk_A          229 EAQVMKKL-----RHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYV  302 (452)
T ss_dssp             HHHHHHHC-----CCTTBCCEEEEECS-SSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHhC-----CCCCEeeEEEEEcC-CceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            99999999     99999999999866 678999999999999999974  35699999999999999999999999999


Q ss_pred             eccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC--CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CC
Q 009980          165 HRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD--PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GY  241 (521)
Q Consensus       165 H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~  241 (521)
                      ||||||+|||+   +.++.+||+|||+++......  ......+|+.|+|||++.+..++.++|||||||++|+|++ |.
T Consensus       303 HrDlkp~Nill---~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~  379 (452)
T 1fmk_A          303 HRDLRAANILV---GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR  379 (452)
T ss_dssp             CSCCSGGGEEE---CGGGCEEECCCCTTC--------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTC
T ss_pred             CCCCChhhEEE---CCCCCEEECCCccceecCCCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCC
Confidence            99999999999   677899999999998654322  1223457788999999998899999999999999999999 99


Q ss_pred             CCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc--CCccc
Q 009980          242 PPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN--HPWVI  303 (521)
Q Consensus       242 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~--h~~~~  303 (521)
                      +||.+.+..+....+..+....   ....+|+.+.++|.+||..||.+|||+.++++  ..++.
T Consensus       380 ~P~~~~~~~~~~~~i~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~  440 (452)
T 1fmk_A          380 VPYPGMVNREVLDQVERGYRMP---CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT  440 (452)
T ss_dssp             CSSTTCCHHHHHHHHHTTCCCC---CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTS
T ss_pred             CCCCCCCHHHHHHHHHcCCCCC---CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhc
Confidence            9999998888888887664322   12568999999999999999999999999987  35554

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.9e-43  Score=341.11  Aligned_cols=251  Identities=28%  Similarity=0.398  Sum_probs=208.1

Q ss_pred             cceeecccccccCceEEEEeEEccCC-CcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCG-ETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEI   88 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   88 (521)
                      -.|++.+.||+|+||+||+|.+...+ .+..||+|++.....                           ......+.+|+
T Consensus        21 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~---------------------------~~~~~~~~~E~   73 (298)
T 3pls_A           21 VVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITE---------------------------MQQVEAFLREG   73 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCS---------------------------HHHHHHHHHHH
T ss_pred             eEEccCceeccCCCceEEEEEEecCCCceeeeeeeecccccc---------------------------HHHHHHHHHHH
Confidence            35777899999999999999976522 334799999864211                           12234578899


Q ss_pred             HHHHHHhhccCCCCCccceeEEEEeCCeE-EEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 009980           89 LVMRKIVENVSPHPNVIDLYDVYEDQNGV-HLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQANIVHR  166 (521)
Q Consensus        89 ~~l~~l~~~~~~hpniv~~~~~~~~~~~~-~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~al~~lH~~~i~H~  166 (521)
                      .+++++     +||||+++++++.+.+.. ++||||+.+|+|.+++.. ...+++..+..++.|++.||.|||++||+||
T Consensus        74 ~~l~~l-----~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~  148 (298)
T 3pls_A           74 LLMRGL-----NHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHR  148 (298)
T ss_dssp             HHHHTC-----CCTTBCCCCEEECCSSSCCEEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred             HHHHhC-----CCCCeeeEEEEEecCCCCcEEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence            999998     999999999999877655 999999999999999976 4568999999999999999999999999999


Q ss_pred             cCCCCcEEEeeCCCCCCEEEeecCCCccCCCC-----CCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-C
Q 009980          167 DLKPENCLFLNDREDSPLKIMDFGLSSVEGYT-----DPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-G  240 (521)
Q Consensus       167 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g  240 (521)
                      ||||+||++   +.++.+||+|||+++.....     .......||+.|+|||.+.+..++.++||||||+++|+|++ |
T Consensus       149 dikp~Nili---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~  225 (298)
T 3pls_A          149 DLAARNCML---DESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRG  225 (298)
T ss_dssp             CCSGGGEEE---CTTCCEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTS
T ss_pred             CCCcceEEE---cCCCcEEeCcCCCcccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCC
Confidence            999999999   77889999999999754322     12234468899999999999999999999999999999999 5


Q ss_pred             CCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          241 YPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       241 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      .+||...+..+....+..+.....   ...+|+.+.+++.+||..||.+|||+.++++
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~  280 (298)
T 3pls_A          226 APPYRHIDPFDLTHFLAQGRRLPQ---PEYCPDSLYQVMQQCWEADPAVRPTFRVLVG  280 (298)
T ss_dssp             CCTTTTSCGGGHHHHHHTTCCCCC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCccCCHHHHHHHhhcCCCCCC---CccchHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            666777777777776666653322   2458999999999999999999999999986

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=100.00  E-value=1.3e-43  Score=350.56  Aligned_cols=255  Identities=25%  Similarity=0.384  Sum_probs=190.3

Q ss_pred             ccccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHH
Q 009980            3 QETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDA   82 (521)
Q Consensus         3 ~~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (521)
                      +..+.-..+|++.+.||+|+||.||+|+++.  +++.||||++.....                            ....
T Consensus        21 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~--~~~~vavK~~~~~~~----------------------------~~~~   70 (337)
T 3ll6_A           21 QTVELGELRLRVRRVLAEGGFAFVYEAQDVG--SGREYALKRLLSNEE----------------------------EKNR   70 (337)
T ss_dssp             CEEEETTEEEEEEEEEECCSSEEEEEEEETT--TCCEEEEEEEEESSH----------------------------HHHH
T ss_pred             ceeeccCceEEEEEEEccCCceEEEEEEECC--CCcEEEEEEecCCch----------------------------HHHH
Confidence            3444556799999999999999999999987  788999999854211                            2234


Q ss_pred             HHHHHHHHHHHHhhccCCCCCccceeEEEE--------eCCeEEEEEeccCCCchHHHHHh---cCCCCHHHHHHHHHHH
Q 009980           83 LLTNEILVMRKIVENVSPHPNVIDLYDVYE--------DQNGVHLILELCSGGELFDRIVA---QERYMEVGAAAVIRQI  151 (521)
Q Consensus        83 ~~~~E~~~l~~l~~~~~~hpniv~~~~~~~--------~~~~~~lv~e~~~gg~L~~~l~~---~~~~~~~~~~~i~~qi  151 (521)
                      .+.+|+.+++++    .+||||+++++++.        ....+++||||+. |+|.+++..   .+.+++..+..++.||
T Consensus        71 ~~~~e~~~l~~l----~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi  145 (337)
T 3ll6_A           71 AIIQEVCFMKKL----SGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQT  145 (337)
T ss_dssp             HHHHHHHHHHHH----TTSTTBCCEEEEEEECTTTSTTSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHh----ccCCChhhccccccccccccccCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHH
Confidence            578899999998    24999999999994        3445899999996 589888764   5679999999999999


Q ss_pred             HHHHHHHHHCC--CeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC-------------cccccCCccccccccc
Q 009980          152 AEGLAALHQAN--IVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP-------------VVGLFGSIDYVSPEAL  216 (521)
Q Consensus       152 l~al~~lH~~~--i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~-------------~~~~~gt~~y~aPE~~  216 (521)
                      +.||.|||++|  |+||||||+|||+   +.++.+||+|||++........             .....||+.|+|||++
T Consensus       146 ~~~l~~LH~~~~~ivH~Dikp~NIl~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~  222 (337)
T 3ll6_A          146 CRAVQHMHRQKPPIIHRDLKVENLLL---SNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEII  222 (337)
T ss_dssp             HHHHHHHHTSSSCCBCCCCCGGGCEE---CTTSCEEBCCCTTCBCCSSCC------------------------------
T ss_pred             HHHHHHHHhCCCCEEEccCCcccEEE---CCCCCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhh
Confidence            99999999999  9999999999999   7778999999999986543221             1134689999999998


Q ss_pred             ---ccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCH
Q 009980          217 ---LQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSA  293 (521)
Q Consensus       217 ---~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~  293 (521)
                         .+..++.++|||||||++|+|++|..||.........    ......+  .....++.+.+||.+||..||.+|||+
T Consensus       223 ~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~----~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~  296 (337)
T 3ll6_A          223 DLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIV----NGKYSIP--PHDTQYTVFHSLIRAMLQVNPEERLSI  296 (337)
T ss_dssp             -CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC----------------CCCC--TTCCSSGGGHHHHHHHSCSSGGGSCCH
T ss_pred             hccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHhh----cCcccCC--cccccchHHHHHHHHHccCChhhCcCH
Confidence               5667899999999999999999999999765543322    2222222  224567889999999999999999999


Q ss_pred             HHHHcCCc
Q 009980          294 QELLNHPW  301 (521)
Q Consensus       294 ~~~l~h~~  301 (521)
                      .++++|.+
T Consensus       297 ~e~l~~l~  304 (337)
T 3ll6_A          297 AEVVHQLQ  304 (337)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99998754

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=100.00  E-value=1.7e-43  Score=346.85  Aligned_cols=255  Identities=24%  Similarity=0.334  Sum_probs=206.9

Q ss_pred             ccccccce-eecccccccCceEEEEeEEc--cCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccH
Q 009980            5 TRKLTDEY-EVTDILGRGGFSVVRRGIKK--TCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSD   81 (521)
Q Consensus         5 ~~~~~~~Y-~~~~~lG~G~~g~V~~a~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (521)
                      ...+.++| ++++.||+|+||.||+|..+  ...+++.||||++.....                           ....
T Consensus        25 ~~~~~~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~---------------------------~~~~   77 (318)
T 3lxp_A           25 PTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAG---------------------------PQHR   77 (318)
T ss_dssp             CCBCCGGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCC---------------------------HHHH
T ss_pred             CceecHHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccC---------------------------hHHH
Confidence            45577777 99999999999999887643  223788999999964311                           1224


Q ss_pred             HHHHHHHHHHHHHhhccCCCCCccceeEEEEeC--CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 009980           82 ALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQ--NGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALH  159 (521)
Q Consensus        82 ~~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~--~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH  159 (521)
                      ..+.+|+.+++++     +||||+++++++.+.  ..+|+||||+++|+|.+++... .+++..+..++.||+.||.|||
T Consensus        78 ~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~i~~~l~~~l~~LH  151 (318)
T 3lxp_A           78 SGWKQEIDILRTL-----YHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRH-SIGLAQLLLFAQQICEGMAYLH  151 (318)
T ss_dssp             HHHHHHHHHHHHC-----CCTTBCCEEEEEEETTTTEEEEEECCCTTCBHHHHGGGS-CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhC-----CCcchhhEEEEEecCCCceEEEEEecccCCcHHHHHhhC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            5588999999999     899999999999884  6899999999999999988764 5999999999999999999999


Q ss_pred             HCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC----cccccCCcccccccccccCCCCchhhhHHHHHHHH
Q 009980          160 QANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP----VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILY  235 (521)
Q Consensus       160 ~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~  235 (521)
                      ++||+||||||+||++   +.++.+||+|||++........    .....||+.|+|||++.+..++.++||||||+++|
T Consensus       152 ~~~ivH~Dikp~Nil~---~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~  228 (318)
T 3lxp_A          152 AQHYIHRDLAARNVLL---DNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLY  228 (318)
T ss_dssp             HTTEECSCCSGGGEEE---CTTCCEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHH
T ss_pred             hCCccCCCCchheEEE---cCCCCEEECCccccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHH
Confidence            9999999999999999   7788999999999986544322    23345888999999999889999999999999999


Q ss_pred             HHHhCCCCCCCCCcH---------------HHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          236 ILLSGYPPFIAQSNR---------------QKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       236 ~ll~g~~pf~~~~~~---------------~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      +|++|..||......               .....+..+...   .....+|+++.+||.+||..||.+|||+.++++
T Consensus       229 ~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~  303 (318)
T 3lxp_A          229 ELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERL---PRPDKCPAEVYHLMKNCWETEASFRPTFENLIP  303 (318)
T ss_dssp             HHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcccCC---CCCccccHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            999999999654321               112222222211   123568999999999999999999999999985

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=9.1e-44  Score=355.72  Aligned_cols=252  Identities=25%  Similarity=0.398  Sum_probs=202.2

Q ss_pred             cceeecccccccCceEEEEeEEccC-CCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTC-GETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEI   88 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   88 (521)
                      ..|++.+.||+|+||.||+|..... +....||||.++....                           ......+.+|+
T Consensus        89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~---------------------------~~~~~~~~~E~  141 (373)
T 3c1x_A           89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD---------------------------IGEVSQFLTEG  141 (373)
T ss_dssp             EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSC---------------------------SHHHHHHHHHH
T ss_pred             ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCC---------------------------HHHHHHHHHHH
Confidence            4688999999999999999998642 2345689999854211                           12235578899


Q ss_pred             HHHHHHhhccCCCCCccceeEEEE-eCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 009980           89 LVMRKIVENVSPHPNVIDLYDVYE-DQNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQANIVHR  166 (521)
Q Consensus        89 ~~l~~l~~~~~~hpniv~~~~~~~-~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~~~i~H~  166 (521)
                      .+++++     +||||+++++++. .++..|+||||+.||+|.+++... ..+++..+..++.||+.||.|||++||+||
T Consensus       142 ~il~~l-----~hpnIv~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHr  216 (373)
T 3c1x_A          142 IIMKDF-----SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR  216 (373)
T ss_dssp             TTSTTC-----CCTTBCCCCEEECCCSSCCEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred             HHHHhC-----CCCCcceEEEEEEcCCCCeEEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecC
Confidence            998888     9999999999864 456889999999999999999764 458899999999999999999999999999


Q ss_pred             cCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC-----CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-C
Q 009980          167 DLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD-----PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-G  240 (521)
Q Consensus       167 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g  240 (521)
                      ||||+|||+   +.++.+||+|||+++......     ......+|+.|+|||++.+..++.++|||||||++|+|++ |
T Consensus       217 Dlkp~NIll---~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~  293 (373)
T 3c1x_A          217 DLAARNCML---DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG  293 (373)
T ss_dssp             CCCGGGEEE---CTTCCEEECCC---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred             ccchheEEE---CCCCCEEEeeccccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCc
Confidence            999999999   778899999999997543221     1233457889999999999999999999999999999999 7


Q ss_pred             CCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          241 YPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       241 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      .+||.+.+..+....+..+......   ..+|+.+.+++.+||..||.+|||+.+++++
T Consensus       294 ~~p~~~~~~~~~~~~~~~~~~~~~p---~~~~~~l~~li~~cl~~dp~~RPs~~ell~~  349 (373)
T 3c1x_A          294 APPYPDVNTFDITVYLLQGRRLLQP---EYCPDPLYEVMLKCWHPKAEMRPSFSELVSR  349 (373)
T ss_dssp             CCSCTTSCSSCHHHHHHTTCCCCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHcCCCCCCC---CCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            8899888777777777776543322   4589999999999999999999999999873

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=100.00  E-value=4.3e-44  Score=358.15  Aligned_cols=250  Identities=18%  Similarity=0.212  Sum_probs=198.0

Q ss_pred             cccccceeecccccccCceEEEEeE-----EccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCcccccccccccccc
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGI-----KKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVS   80 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~-----~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (521)
                      ..-.++|++.+.||+|+||+||+|+     +..  +++.||||++...                               .
T Consensus        61 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~--~~~~vavK~~~~~-------------------------------~  107 (365)
T 3e7e_A           61 QLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAK--NKQKFVLKVQKPA-------------------------------N  107 (365)
T ss_dssp             ECSSSEEEEEEEEEECSSEEEEEEEC---------CCCCEEEEEESSC-------------------------------C
T ss_pred             EECCEEEEEEEEeeccCCEEEEEEEecCCcccc--cCcEEEEEEeCCC-------------------------------C
Confidence            3446789999999999999999995     444  7889999998542                               1


Q ss_pred             HHHHHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh-----cCCCCHHHHHHHHHHHHHHH
Q 009980           81 DALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA-----QERYMEVGAAAVIRQIAEGL  155 (521)
Q Consensus        81 ~~~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-----~~~~~~~~~~~i~~qil~al  155 (521)
                      ...+..|+.+++++..  ..||||+++++++...+..|+|||||+||+|.+++..     ...+++..+..++.||+.||
T Consensus       108 ~~~~~~e~~~~~~l~~--~~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L  185 (365)
T 3e7e_A          108 PWEFYIGTQLMERLKP--SMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMI  185 (365)
T ss_dssp             HHHHHHHHHHHHHSCG--GGGGGBCCEEEEEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHhhh--hhhhhhhhhheeeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHH
Confidence            3347788888888721  2499999999999999999999999999999999974     46799999999999999999


Q ss_pred             HHHHHCCCeeccCCCCcEEEee--------CCCCCCEEEeecCCCccCC---CCCCcccccCCcccccccccccCCCCch
Q 009980          156 AALHQANIVHRDLKPENCLFLN--------DREDSPLKIMDFGLSSVEG---YTDPVVGLFGSIDYVSPEALLQDRITSK  224 (521)
Q Consensus       156 ~~lH~~~i~H~dlkp~Nil~~~--------~~~~~~~kl~Dfg~a~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~  224 (521)
                      .|||++||+||||||+|||+..        +...+.+||+|||+|+...   ........+||+.|+|||++.+..|+.+
T Consensus       186 ~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  265 (365)
T 3e7e_A          186 EQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQ  265 (365)
T ss_dssp             HHHHTTTEECCCCSGGGEEECGGGTCC------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTH
T ss_pred             HHHhhCCeecCCCCHHHEEecccccCccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCcc
Confidence            9999999999999999999933        1227899999999996432   2233455679999999999999999999


Q ss_pred             hhhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          225 SDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       225 ~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      +|||||||++|+|++|+.||.........   ....  + ..  ...++.+.+++.+||+.+|.+|++..+.+.
T Consensus       266 ~DiwslG~il~elltg~~pf~~~~~~~~~---~~~~--~-~~--~~~~~~~~~~~~~~l~~~p~~r~~~~~~l~  331 (365)
T 3e7e_A          266 IDYFGVAATVYCMLFGTYMKVKNEGGECK---PEGL--F-RR--LPHLDMWNEFFHVMLNIPDCHHLPSLDLLR  331 (365)
T ss_dssp             HHHHHHHHHHHHHHHSSCCCEEEETTEEE---ECSC--C-TT--CSSHHHHHHHHHHHHCCCCTTCCCCHHHHH
T ss_pred             ccHHHHHHHHHHHHhCCCccccCCCCcee---echh--c-cc--cCcHHHHHHHHHHHcCCCCCCcchHHHHHH
Confidence            99999999999999999999654321100   0000  0 01  124667899999999999999965544444

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=100.00  E-value=4.4e-43  Score=373.33  Aligned_cols=245  Identities=24%  Similarity=0.361  Sum_probs=207.3

Q ss_pred             ccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHHh
Q 009980           16 DILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIV   95 (521)
Q Consensus        16 ~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~   95 (521)
                      +.||+|+||.||+|.++...+++.||||+++.....                          ......+.+|+.+++++ 
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~--------------------------~~~~~~~~~E~~il~~l-  427 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAND--------------------------PALKDELLAEANVMQQL-  427 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGC--------------------------GGGHHHHHHHHHHHHHC-
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCC--------------------------HHHHHHHHHHHHHHHhC-
Confidence            479999999999997654447789999998653211                          12245688999999999 


Q ss_pred             hccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q 009980           96 ENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLF  175 (521)
Q Consensus        96 ~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~  175 (521)
                          +||||+++++++.. +.+++|||||.||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+
T Consensus       428 ----~hpnIv~l~~~~~~-~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl  502 (635)
T 4fl3_A          428 ----DNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL  502 (635)
T ss_dssp             ----CCTTBCCEEEEEES-SSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE
T ss_pred             ----CCCCEeeEEEEEec-CCEEEEEEccCCCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEE
Confidence                99999999999965 5589999999999999999998899999999999999999999999999999999999999


Q ss_pred             eeCCCCCCEEEeecCCCccCCCCC----CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCCcH
Q 009980          176 LNDREDSPLKIMDFGLSSVEGYTD----PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNR  250 (521)
Q Consensus       176 ~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~  250 (521)
                         +.++.+||+|||+|+......    ......||+.|+|||++.+..++.++|||||||++|+|++ |..||.+.+..
T Consensus       503 ---~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~  579 (635)
T 4fl3_A          503 ---VTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS  579 (635)
T ss_dssp             ---EETTEEEECCTTHHHHTTC-------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH
T ss_pred             ---eCCCCEEEEEcCCccccccCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence               566789999999997654322    1223356788999999999999999999999999999998 99999999988


Q ss_pred             HHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          251 QKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       251 ~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      +....+..+.....   ...+|+++.+||.+||..||.+|||+.++++
T Consensus       580 ~~~~~i~~~~~~~~---p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~  624 (635)
T 4fl3_A          580 EVTAMLEKGERMGC---PAGCPREMYDLMNLCWTYDVENRPGFAAVEL  624 (635)
T ss_dssp             HHHHHHHTTCCCCC---CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHcCCCCCC---CCCCCHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence            88888887754322   2568999999999999999999999999985

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=100.00  E-value=3.2e-43  Score=343.16  Aligned_cols=241  Identities=29%  Similarity=0.489  Sum_probs=195.5

Q ss_pred             ccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEI   88 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   88 (521)
                      .++|++.+.||+|+||.||+|++.    ++.||||++...                              .....+.+|+
T Consensus         7 ~~~~~~~~~lg~G~~g~V~~~~~~----~~~vavK~~~~~------------------------------~~~~~~~~E~   52 (307)
T 2eva_A            7 YKEIEVEEVVGRGAFGVVCKAKWR----AKDVAIKQIESE------------------------------SERKAFIVEL   52 (307)
T ss_dssp             GGGEEEEEEEECCSSSEEEEEEET----TEEEEEEECSST------------------------------THHHHHHHHH
T ss_pred             HhHeeeeeEeecCCCceEEEEEEC----CeeEEEEEecCh------------------------------hHHHHHHHHH
Confidence            468999999999999999999874    567999998531                              1235588999


Q ss_pred             HHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CC
Q 009980           89 LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE---RYMEVGAAAVIRQIAEGLAALHQ---AN  162 (521)
Q Consensus        89 ~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~---~~~~~~~~~i~~qil~al~~lH~---~~  162 (521)
                      .+++++     +||||+++++++.  +..|+||||++||+|.+++....   .+++..+..++.|++.||.|||+   +|
T Consensus        53 ~~l~~l-----~hp~iv~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~  125 (307)
T 2eva_A           53 RQLSRV-----NHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA  125 (307)
T ss_dssp             HHHHHC-----CCTTBCCEEEBCT--TTTEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSC
T ss_pred             HHHhcC-----CCCCcCeEEEEEc--CCcEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence            999998     9999999999876  34799999999999999998655   37899999999999999999999   89


Q ss_pred             CeeccCCCCcEEEeeCCCCCC-EEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCC
Q 009980          163 IVHRDLKPENCLFLNDREDSP-LKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGY  241 (521)
Q Consensus       163 i~H~dlkp~Nil~~~~~~~~~-~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~  241 (521)
                      |+||||||+||++   +.++. +||+|||++......  .....||+.|+|||++.+..++.++||||||+++|+|++|+
T Consensus       126 ivH~dlkp~NIll---~~~~~~~kl~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~  200 (307)
T 2eva_A          126 LIHRDLKPPNLLL---VAGGTVLKICDFGTACDIQTH--MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRR  200 (307)
T ss_dssp             CCCCCCSGGGEEE---ETTTTEEEECCCCC--------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTC
T ss_pred             eecCCCChhHEEE---eCCCCEEEEcccccccccccc--cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCC
Confidence            9999999999999   45555 799999999764322  23446999999999999989999999999999999999999


Q ss_pred             CCCCCCCcH--HHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          242 PPFIAQSNR--QKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       242 ~pf~~~~~~--~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      .||......  .....+..+...   .....+|+.+.+++.+||..||.+|||+.++++
T Consensus       201 ~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  256 (307)
T 2eva_A          201 KPFDEIGGPAFRIMWAVHNGTRP---PLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVK  256 (307)
T ss_dssp             CTTTTTCSSHHHHHHHHHTTCCC---CCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCchhhCccHHHHHHHHhcCCCC---CcccccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            999765433  233333333322   223568999999999999999999999999987

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=100.00  E-value=1.2e-42  Score=369.05  Aligned_cols=250  Identities=26%  Similarity=0.399  Sum_probs=208.3

Q ss_pred             cceeecc-cccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHH
Q 009980           10 DEYEVTD-ILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEI   88 (521)
Q Consensus        10 ~~Y~~~~-~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   88 (521)
                      ++|.+.+ .||+|+||.||+|.++..+++..||||+++.....                           .....+.+|+
T Consensus       335 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~---------------------------~~~~~~~~E~  387 (613)
T 2ozo_A          335 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEK---------------------------ADTEEMMREA  387 (613)
T ss_dssp             TSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSS---------------------------TTHHHHHHHH
T ss_pred             cceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCCh---------------------------HHHHHHHHHH
Confidence            4555555 89999999999998875446778999998653211                           1245688999


Q ss_pred             HHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecc
Q 009980           89 LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQANIVHRD  167 (521)
Q Consensus        89 ~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~~~i~H~d  167 (521)
                      .+++++     +||||+++++++.. +.+|+|||||.||+|.+++... ..+++..+..++.||+.||.|||++||+|||
T Consensus       388 ~il~~l-----~hpniv~l~~~~~~-~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrD  461 (613)
T 2ozo_A          388 QIMHQL-----DNPYIVRLIGVCQA-EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRN  461 (613)
T ss_dssp             HHHTTC-----CCTTBCCEEEEEES-SSEEEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             HHHHhC-----CCCCEeeEEEEecc-CCeEEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCc
Confidence            999988     99999999999976 5699999999999999998754 4599999999999999999999999999999


Q ss_pred             CCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC----cccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CCC
Q 009980          168 LKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP----VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYP  242 (521)
Q Consensus       168 lkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~  242 (521)
                      |||+|||+   +.++.+||+|||+|+.......    .....+|+.|+|||++.+..++.++|||||||++|+|++ |..
T Consensus       462 lkp~NILl---~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~  538 (613)
T 2ozo_A          462 LAARNVLL---VNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQK  538 (613)
T ss_dssp             CSGGGEEE---EETTEEEECCCSTTTTCC--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             CCHHHEEE---cCCCcEEEeeccCcccccCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence            99999999   5677899999999986543221    122345688999999998999999999999999999998 999


Q ss_pred             CCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          243 PFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       243 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      ||.+.+..+....+..+....   ....+|+++.++|.+||..||.+|||+.++++
T Consensus       539 Pf~~~~~~~~~~~i~~~~~~~---~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~  591 (613)
T 2ozo_A          539 PYKKMKGPEVMAFIEQGKRME---CPPECPPELYALMSDCWIYKWEDRPDFLTVEQ  591 (613)
T ss_dssp             TTTTCCSHHHHHHHHTTCCCC---CCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHH
T ss_pred             CCCCCCHHHHHHHHHcCCCCC---CCCcCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            999999988888888775322   22568999999999999999999999999864

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=100.00  E-value=1.4e-44  Score=357.56  Aligned_cols=260  Identities=18%  Similarity=0.206  Sum_probs=197.4

Q ss_pred             ccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEI   88 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   88 (521)
                      .++|++.+.||+|+||+||+|++    +++.||||++.+.......                    .........+.+|+
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~----~~~~vAvK~~~~~~~~~~~--------------------~~~~~~~~~~~~E~   74 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQTIA----DHTPVAIKIIAIEGPDLVN--------------------GSHQKTFEEILPEI   74 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEEEEE----TTEEEEEEEEEESCSSCBT--------------------TBCCBCHHHHHHHH
T ss_pred             cccchheeeecccCceEEEEEEe----CCceEEEEEEecCCccccc--------------------cccchhHHHHHHHH
Confidence            47899999999999999999987    4689999999875432100                    00112235688999


Q ss_pred             HHHHHHhhc----cCCCCCccceeEEE-----------------Ee-------------CCeEEEEEeccCCCchHHHHH
Q 009980           89 LVMRKIVEN----VSPHPNVIDLYDVY-----------------ED-------------QNGVHLILELCSGGELFDRIV  134 (521)
Q Consensus        89 ~~l~~l~~~----~~~hpniv~~~~~~-----------------~~-------------~~~~~lv~e~~~gg~L~~~l~  134 (521)
                      .+++.+...    ...||||+++.+++                 .+             .+.+|||||||.||++.+.+.
T Consensus        75 ~~l~~l~~l~~~~~~~h~niv~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~  154 (336)
T 2vuw_A           75 IISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMR  154 (336)
T ss_dssp             HHHHHHHHGGGCSSSBCCCBCCEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGT
T ss_pred             HHHHHHHHhhccccccCCchhhhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHH
Confidence            999988311    01366666666554                 32             788999999999998877775


Q ss_pred             hcCCCCHHHHHHHHHHHHHHHHHHH-HCCCeeccCCCCcEEEeeCCC-----------------CCCEEEeecCCCccCC
Q 009980          135 AQERYMEVGAAAVIRQIAEGLAALH-QANIVHRDLKPENCLFLNDRE-----------------DSPLKIMDFGLSSVEG  196 (521)
Q Consensus       135 ~~~~~~~~~~~~i~~qil~al~~lH-~~~i~H~dlkp~Nil~~~~~~-----------------~~~~kl~Dfg~a~~~~  196 (521)
                      . +.+++..++.++.||+.||.||| ++||+||||||+|||+..++.                 ...+||+|||+|+...
T Consensus       155 ~-~~~~~~~~~~i~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~  233 (336)
T 2vuw_A          155 T-KLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLER  233 (336)
T ss_dssp             T-TCCCHHHHHHHHHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEE
T ss_pred             h-cCCCHHHHHHHHHHHHHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecC
Confidence            4 67899999999999999999999 999999999999999954321                 1279999999998654


Q ss_pred             CCCCcccccCCcccccccccccCCCCchhhhHHHHHH-HHHHHhCCCCCCCCCc-HHHHHHHHc---CCCCCchhhhhcc
Q 009980          197 YTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVI-LYILLSGYPPFIAQSN-RQKQQMIMA---GEFSFYEQTWKNI  271 (521)
Q Consensus       197 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i-l~~ll~g~~pf~~~~~-~~~~~~i~~---~~~~~~~~~~~~~  271 (521)
                      .    ...+||+.|+|||++.+.. +.++||||+|++ .+++++|..||.+... ......+..   .........+..+
T Consensus       234 ~----~~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (336)
T 2vuw_A          234 D----GIVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQI  308 (336)
T ss_dssp             T----TEEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHH
T ss_pred             C----CcEEEeecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhc
Confidence            2    2347999999999998765 899999998777 7788999999954211 112223331   1222333456779


Q ss_pred             CHHHHHHHHHhccCCCCCCCCHHHHH-cCCccc
Q 009980          272 SSSAKQLISSLLTVDPNRRPSAQELL-NHPWVI  303 (521)
Q Consensus       272 s~~~~~li~~~l~~dp~~R~t~~~~l-~h~~~~  303 (521)
                      |+++++||.+||+.|     |+.++| +||||+
T Consensus       309 s~~~~dli~~~L~~d-----sa~e~l~~Hp~f~  336 (336)
T 2vuw_A          309 KRKIQEFHRTMLNFS-----SATDLLCQHSLFK  336 (336)
T ss_dssp             HHHHHHHHHHGGGSS-----SHHHHHHHCGGGC
T ss_pred             CHHHHHHHHHHhccC-----CHHHHHhcCCCcC
Confidence            999999999999976     999999 999984

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=100.00  E-value=1.3e-42  Score=363.63  Aligned_cols=253  Identities=29%  Similarity=0.396  Sum_probs=215.2

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      ...++|++.+.||+|+||.||+|.++.   +..||||+++...                             .....+.+
T Consensus       264 i~~~~~~~~~~lG~G~fg~Vy~~~~~~---~~~vavK~~~~~~-----------------------------~~~~~~~~  311 (535)
T 2h8h_A          264 IPRESLRLEVKLGQGCFGEVWMGTWNG---TTRVAIKTLKPGT-----------------------------MSPEAFLQ  311 (535)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETT---TEEEEEEEECTTS-----------------------------SCHHHHHH
T ss_pred             cchhhhhhheecccCCCeEEEEEEECC---CceEEEEEeCCCC-----------------------------CCHHHHHH
Confidence            446789999999999999999999874   4579999986422                             12345889


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA--QERYMEVGAAAVIRQIAEGLAALHQANIV  164 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~--~~~~~~~~~~~i~~qil~al~~lH~~~i~  164 (521)
                      |+.+|+++     +||||+++++++.+ +.+||||||+.||+|.+++..  ...+++..+..++.||+.||.|||++||+
T Consensus       312 E~~~l~~l-----~hpniv~~~~~~~~-~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iv  385 (535)
T 2h8h_A          312 EAQVMKKL-----RHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYV  385 (535)
T ss_dssp             HHHHHHHC-----CCTTBCCEEEEECS-SSCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHhC-----CCCCEeeEEEEEee-ccceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            99999999     99999999999866 678999999999999999974  35699999999999999999999999999


Q ss_pred             eccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC--CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CC
Q 009980          165 HRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD--PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GY  241 (521)
Q Consensus       165 H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~  241 (521)
                      ||||||+|||+   +.++.+||+|||+++......  ......+|+.|+|||++.+..++.++|||||||++|+|++ |.
T Consensus       386 HrDlkp~NIll---~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~  462 (535)
T 2h8h_A          386 HRDLRAANILV---GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR  462 (535)
T ss_dssp             CSCCSGGGEEE---CGGGCEEECCTTSTTTCCCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTC
T ss_pred             CCCCCHhhEEE---cCCCcEEEcccccceecCCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCC
Confidence            99999999999   677889999999998654221  1223356788999999998899999999999999999999 99


Q ss_pred             CCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC--Cccc
Q 009980          242 PPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH--PWVI  303 (521)
Q Consensus       242 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h--~~~~  303 (521)
                      .||.+....+....+..+....   ....++..+.+||.+||..||++|||+.+++..  .++.
T Consensus       463 ~P~~~~~~~~~~~~i~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~  523 (535)
T 2h8h_A          463 VPYPGMVNREVLDQVERGYRMP---CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT  523 (535)
T ss_dssp             CSSTTCCHHHHHHHHHTTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSC
T ss_pred             CCCCCCCHHHHHHHHHcCCCCC---CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhh
Confidence            9999998888888877664321   225689999999999999999999999999873  4554

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.8e-42  Score=342.49  Aligned_cols=253  Identities=20%  Similarity=0.311  Sum_probs=196.8

Q ss_pred             ccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHH
Q 009980            5 TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALL   84 (521)
Q Consensus         5 ~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (521)
                      ...+.++|++.+.||+|+||.||+|+++    ++.||||++...                               .....
T Consensus        32 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~----~~~vavK~~~~~-------------------------------~~~~~   76 (337)
T 3mdy_A           32 QRTIAKQIQMVKQIGKGRYGEVWMGKWR----GEKVAVKVFFTT-------------------------------EEASW   76 (337)
T ss_dssp             HTTHHHHCEEEEEEEEETTEEEEEEEET----TEEEEEEEEEGG-------------------------------GHHHH
T ss_pred             ccccccceEEEeEeecCCCeEEEEEEEC----CceEEEEEEecc-------------------------------ccchh
Confidence            3456789999999999999999999874    678999998532                               12223


Q ss_pred             HHHHHHHHHHhhccCCCCCccceeEEEEeC----CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Q 009980           85 TNEILVMRKIVENVSPHPNVIDLYDVYEDQ----NGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ  160 (521)
Q Consensus        85 ~~E~~~l~~l~~~~~~hpniv~~~~~~~~~----~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~  160 (521)
                      ..|..++..+   ..+||||+++++++...    ..+|+||||+.||+|.+++.. ..+++..+..++.|++.||.|||+
T Consensus        77 ~~e~~~~~~~---~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~~i~~~l~~lH~  152 (337)
T 3mdy_A           77 FRETEIYQTV---LMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKS-TTLDAKSMLKLAYSSVSGLCHLHT  152 (337)
T ss_dssp             HHHHHHHTST---TCCCTTBCCEEEEEEESCGGGCEEEEEECCCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHHS
T ss_pred             hhHHHHHHHH---hhcCCCeeeEEEEEccCCCCCCceEEEEeccCCCcHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHH
Confidence            4444444332   23899999999999887    789999999999999999966 469999999999999999999999


Q ss_pred             C--------CCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC-----cccccCCcccccccccccCCCCch---
Q 009980          161 A--------NIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP-----VVGLFGSIDYVSPEALLQDRITSK---  224 (521)
Q Consensus       161 ~--------~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~---  224 (521)
                      +        ||+||||||+|||+   +.++.+||+|||+|........     ....+||+.|+|||++.+..+...   
T Consensus       153 ~~~~~~~~~~ivH~Dikp~Nill---~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~  229 (337)
T 3mdy_A          153 EIFSTQGKPAIAHRDLKSKNILV---KKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQS  229 (337)
T ss_dssp             CBCSTTCBCCEECSCCCGGGEEE---CTTSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHH
T ss_pred             hhhhhccCCCEEecccchHHEEE---CCCCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccC
Confidence            9        99999999999999   7788999999999975433221     124579999999999987766554   


Q ss_pred             ---hhhHHHHHHHHHHHhC----------CCCCCCCCc----HHHHHHHH-cCCCC--Cchh-hhhccCHHHHHHHHHhc
Q 009980          225 ---SDMWSLGVILYILLSG----------YPPFIAQSN----RQKQQMIM-AGEFS--FYEQ-TWKNISSSAKQLISSLL  283 (521)
Q Consensus       225 ---~DiwslG~il~~ll~g----------~~pf~~~~~----~~~~~~i~-~~~~~--~~~~-~~~~~s~~~~~li~~~l  283 (521)
                         +|||||||++|+|++|          ..||.....    ........ .....  ++.. ....+++.+.+||.+||
T Consensus       230 ~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  309 (337)
T 3mdy_A          230 YIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECW  309 (337)
T ss_dssp             HHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHS
T ss_pred             ccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhh
Confidence               9999999999999999          777754321    12222222 22211  1111 11357788999999999


Q ss_pred             cCCCCCCCCHHHHHcC
Q 009980          284 TVDPNRRPSAQELLNH  299 (521)
Q Consensus       284 ~~dp~~R~t~~~~l~h  299 (521)
                      ..||.+|||+.++++|
T Consensus       310 ~~dP~~Rps~~ell~~  325 (337)
T 3mdy_A          310 AHNPASRLTALRVKKT  325 (337)
T ss_dssp             CSSGGGSCCHHHHHHH
T ss_pred             hhChhhCCCHHHHHHH
Confidence            9999999999999974

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=100.00  E-value=5.5e-43  Score=343.52  Aligned_cols=254  Identities=22%  Similarity=0.348  Sum_probs=208.4

Q ss_pred             ccccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHH
Q 009980            3 QETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDA   82 (521)
Q Consensus         3 ~~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (521)
                      ++.+...++|++.+.||+|+||.||+|.++.     .||+|++........                          ...
T Consensus        26 ~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~-----~~avk~~~~~~~~~~--------------------------~~~   74 (319)
T 2y4i_B           26 QEWDIPFEQLEIGELIGKGRFGQVYHGRWHG-----EVAIRLIDIERDNED--------------------------QLK   74 (319)
T ss_dssp             GGSSSCCSCEECCCBCCCSSSSEEEEEEESS-----SEEEEECCCCSCCCC--------------------------CCC
T ss_pred             ccccCCHHHeEEeeEeccCCceEEEEEEEcC-----eEEEEEeecCCCCHH--------------------------HHH
Confidence            3445566899999999999999999998853     399999875432110                          012


Q ss_pred             HHHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC
Q 009980           83 LLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE-RYMEVGAAAVIRQIAEGLAALHQA  161 (521)
Q Consensus        83 ~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qil~al~~lH~~  161 (521)
                      .+.+|+.+++++     +||||+++++++.+.+.+++||||+.|++|.+++...+ .+++..+..++.||+.||.|||++
T Consensus        75 ~~~~e~~~l~~l-----~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~  149 (319)
T 2y4i_B           75 AFKREVMAYRQT-----RHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAK  149 (319)
T ss_dssp             CCCTTGGGGTTC-----CCTTBCCCCEEEECSSCEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHhcC-----CCCCEeEEEEEEecCCceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            245677888877     99999999999999999999999999999999997654 699999999999999999999999


Q ss_pred             CCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCC------CCCcccccCCccccccccccc---------CCCCchhh
Q 009980          162 NIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGY------TDPVVGLFGSIDYVSPEALLQ---------DRITSKSD  226 (521)
Q Consensus       162 ~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~------~~~~~~~~gt~~y~aPE~~~~---------~~~~~~~D  226 (521)
                      ||+||||||+||++   + ++.+||+|||++.....      ........||+.|+|||++.+         ..++.++|
T Consensus       150 ~i~H~dlkp~NIl~---~-~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~D  225 (319)
T 2y4i_B          150 GILHKDLKSKNVFY---D-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSD  225 (319)
T ss_dssp             TCCCCCCCSTTEEE---C---CCEECCCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHH
T ss_pred             CccccCCChhhEEE---e-CCCEEEeecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhh
Confidence            99999999999999   3 56899999999875421      112233468999999999874         35789999


Q ss_pred             hHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          227 MWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       227 iwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      |||||+++|+|++|..||.+.+.......+..+......  ...++.++.+++.+||..||.+|||+.++++
T Consensus       226 i~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~  295 (319)
T 2y4i_B          226 VFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNLS--QIGMGKEISDILLFCWAFEQEERPTFTKLMD  295 (319)
T ss_dssp             HHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTTCCCCCC--CSSCCTTHHHHHHHHHCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccCCCCCCC--cCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            999999999999999999998888887777766543322  2358899999999999999999999999997

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=100.00  E-value=1.3e-42  Score=338.89  Aligned_cols=251  Identities=27%  Similarity=0.401  Sum_probs=200.9

Q ss_pred             eeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHH
Q 009980           12 YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVM   91 (521)
Q Consensus        12 Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l   91 (521)
                      |..++.||+|+||.||+|..    +++.||||++.......                        .......+.+|+.++
T Consensus        33 ~~~~~~lg~G~~g~Vy~~~~----~~~~vavK~~~~~~~~~------------------------~~~~~~~~~~E~~~l   84 (307)
T 2nru_A           33 SVGGNKMGEGGFGVVYKGYV----NNTTVAVKKLAAMVDIT------------------------TEELKQQFDQEIKVM   84 (307)
T ss_dssp             TTTCCEEEECSSEEEEEEES----SSCEEEEEEECCCTTSC------------------------TTTHHHHHHHHHHHH
T ss_pred             cccCCccccCCCeEEEEEEE----CCceEEEEEEecccCcc------------------------hHHHHHHHHHHHHHH
Confidence            44558999999999999986    46789999986532111                        012245688999999


Q ss_pred             HHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 009980           92 RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA---QERYMEVGAAAVIRQIAEGLAALHQANIVHRDL  168 (521)
Q Consensus        92 ~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~---~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dl  168 (521)
                      +++     +||||+++++++.+.+..|+||||++|++|.+++..   ...+++..+..++.||+.||.|||++||+||||
T Consensus        85 ~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl  159 (307)
T 2nru_A           85 AKC-----QHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDI  159 (307)
T ss_dssp             HHC-----CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             Hhc-----CCCCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCC
Confidence            998     999999999999999999999999999999999874   356999999999999999999999999999999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCccCCCCCC---cccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCC
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFI  245 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~  245 (521)
                      ||+||++   +.++.+||+|||++........   .....||+.|+|||++.+ .++.++||||||+++|+|++|.+||.
T Consensus       160 kp~Nili---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~  235 (307)
T 2nru_A          160 KSANILL---DEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVD  235 (307)
T ss_dssp             CGGGEEE---CTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBC
T ss_pred             CHHHEEE---cCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcc
Confidence            9999999   7788999999999976543221   233469999999998864 58999999999999999999999997


Q ss_pred             CCCcHH----HHHHHHcCCCCCc-------hhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          246 AQSNRQ----KQQMIMAGEFSFY-------EQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       246 ~~~~~~----~~~~i~~~~~~~~-------~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      ......    ....+......+.       .......+..+.+++.+||..||.+|||+.+++++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~  300 (307)
T 2nru_A          236 EHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQL  300 (307)
T ss_dssp             TTBSSSBTTHHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             cCcchHHHHHHHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            755432    2222222211110       01123356789999999999999999999999863

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=100.00  E-value=1.7e-42  Score=341.03  Aligned_cols=254  Identities=22%  Similarity=0.306  Sum_probs=204.4

Q ss_pred             cccccceeecccccccCceEEEEeEEc--cCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKK--TCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDAL   83 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (521)
                      ....++|++.+.||+|+||.||+|+..  ...+++.||||++.....                            .....
T Consensus        37 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~----------------------------~~~~~   88 (326)
T 2w1i_A           37 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE----------------------------EHLRD   88 (326)
T ss_dssp             CCCGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCS----------------------------HHHHH
T ss_pred             ccCHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCH----------------------------HHHHH
Confidence            345678999999999999999999842  122788999999864211                            22345


Q ss_pred             HHHHHHHHHHHhhccCCCCCccceeEEEEeCC--eEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH
Q 009980           84 LTNEILVMRKIVENVSPHPNVIDLYDVYEDQN--GVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQ  160 (521)
Q Consensus        84 ~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~--~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~  160 (521)
                      +.+|+.+++++     +||||+++++++...+  .+++||||++|++|.+++... ..+++..+..++.||+.||.|||+
T Consensus        89 ~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~  163 (326)
T 2w1i_A           89 FEREIEILKSL-----QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT  163 (326)
T ss_dssp             HHHHHHHHHTC-----CCTTBCCEEEEECC----CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhC-----CCCCeeeEEEEEEecCCCceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh
Confidence            88999999998     9999999999986544  789999999999999999875 459999999999999999999999


Q ss_pred             CCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC----cccccCCcccccccccccCCCCchhhhHHHHHHHHH
Q 009980          161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP----VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYI  236 (521)
Q Consensus       161 ~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~  236 (521)
                      +||+||||||+||++   +.++.+||+|||++........    .....+|+.|+|||++.+..++.++||||||+++|+
T Consensus       164 ~~ivH~dikp~NIli---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e  240 (326)
T 2w1i_A          164 KRYIHRDLATRNILV---ENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE  240 (326)
T ss_dssp             TTEECSCCCGGGEEE---EETTEEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHH
T ss_pred             CCEeccCCCcceEEE---cCCCcEEEecCcchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHH
Confidence            999999999999999   5667899999999986543322    123457788999999998889999999999999999


Q ss_pred             HHhCCCCCCCCCcH----------------HHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          237 LLSGYPPFIAQSNR----------------QKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       237 ll~g~~pf~~~~~~----------------~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      |++|..||......                .....+..+.. .  +....+|+++.++|.+||..||.+|||+.++++
T Consensus       241 l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~  315 (326)
T 2w1i_A          241 LFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR-L--PRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL  315 (326)
T ss_dssp             HHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCC-C--CCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcCCC-C--CCCCcccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            99999998643111                11122222221 1  123568999999999999999999999999986

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=100.00  E-value=1.4e-42  Score=344.05  Aligned_cols=252  Identities=19%  Similarity=0.335  Sum_probs=202.6

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      ..+.++|++.+.||+|+||.||+|++    +++.||||++...                               ....+.
T Consensus        38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~----~~~~vavK~~~~~-------------------------------~~~~~~   82 (342)
T 1b6c_B           38 RTIARTIVLQESIGKGRFGEVWRGKW----RGEEVAVKIFSSR-------------------------------EERSWF   82 (342)
T ss_dssp             HHHHHHCEEEEEEEEETTEEEEEEEE----TTEEEEEEEECGG-------------------------------GHHHHH
T ss_pred             ccccccEEEEeeecCCCCcEEEEEEE----cCccEEEEEeCch-------------------------------hHHHHH
Confidence            34568999999999999999999987    4678999998531                               234467


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCC----eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH--
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQN----GVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALH--  159 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~----~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH--  159 (521)
                      +|..++..+.   .+||||+++++++....    ..|+||||+.||+|.+++.. ..+++..+..++.|++.||.|||  
T Consensus        83 ~e~~~~~~~~---l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~~i~~~l~~lH~~  158 (342)
T 1b6c_B           83 REAEIYQTVM---LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR-YTVTVEGMIKLALSTASGLAHLHME  158 (342)
T ss_dssp             HHHHHHHHSC---CCCTTBCCEEEEEECCCSSCCCEEEEECCCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHhh---cCCCcEEEEEeeecccCCccceeEEEEeecCCCcHHHHHhc-cCccHHHHHHHHHHHHHHHHHHHHH
Confidence            7888887721   28999999999998876    89999999999999999976 46999999999999999999999  


Q ss_pred             ------HCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC-----CcccccCCcccccccccccC------CCC
Q 009980          160 ------QANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD-----PVVGLFGSIDYVSPEALLQD------RIT  222 (521)
Q Consensus       160 ------~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~------~~~  222 (521)
                            ++||+||||||+||++   +.++.+||+|||++.......     ......||+.|+|||++.+.      .++
T Consensus       159 ~~~~~~~~~ivH~Dlkp~NIll---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~  235 (342)
T 1b6c_B          159 IVGTQGKPAIAHRDLKSKNILV---KKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESF  235 (342)
T ss_dssp             BCSTTCBCEEECSCCSGGGEEE---CTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHH
T ss_pred             HhhhcccCCeeeCCCCHHHEEE---CCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccC
Confidence                  8999999999999999   778899999999997654332     12345799999999999765      234


Q ss_pred             chhhhHHHHHHHHHHHhC----------CCCCCCCC-----cHHHHHHHHcCCCCCc-hhhh--hccCHHHHHHHHHhcc
Q 009980          223 SKSDMWSLGVILYILLSG----------YPPFIAQS-----NRQKQQMIMAGEFSFY-EQTW--KNISSSAKQLISSLLT  284 (521)
Q Consensus       223 ~~~DiwslG~il~~ll~g----------~~pf~~~~-----~~~~~~~i~~~~~~~~-~~~~--~~~s~~~~~li~~~l~  284 (521)
                      .++|||||||++|+|++|          ..||....     .......+........ ...|  ..++..+.+++.+||.
T Consensus       236 ~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  315 (342)
T 1b6c_B          236 KRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWY  315 (342)
T ss_dssp             HHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCC
T ss_pred             CcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhc
Confidence            789999999999999999          78986643     2333344433332221 1111  2356789999999999


Q ss_pred             CCCCCCCCHHHHHcC
Q 009980          285 VDPNRRPSAQELLNH  299 (521)
Q Consensus       285 ~dp~~R~t~~~~l~h  299 (521)
                      .||.+|||+.++++|
T Consensus       316 ~dp~~Rps~~~i~~~  330 (342)
T 1b6c_B          316 ANGAARLTALRIKKT  330 (342)
T ss_dssp             SSGGGSCCHHHHHHH
T ss_pred             cChhhCCCHHHHHHH
Confidence            999999999999974

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=100.00  E-value=3.7e-43  Score=347.38  Aligned_cols=260  Identities=24%  Similarity=0.340  Sum_probs=191.5

Q ss_pred             ccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHH
Q 009980            5 TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALL   84 (521)
Q Consensus         5 ~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (521)
                      ...-.++|++.+.||+|+||.||+|+.    +++.||||++....                               ...+
T Consensus         8 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~----~~~~vavK~~~~~~-------------------------------~~~~   52 (336)
T 3g2f_A            8 PSLDLDNLKLLELIGRGRYGAVYKGSL----DERPVAVKVFSFAN-------------------------------RQNF   52 (336)
T ss_dssp             -CCCTTSEEEEEEEEECSSEEEEEEEE----TTEEEEEEEEEGGG-------------------------------HHHH
T ss_pred             CCcChHHhheeeecccCCCeEEEEEEE----CCeEEEEEEeeccc-------------------------------hhhH
Confidence            445568999999999999999999976    56889999986421                               1223


Q ss_pred             HHHHHHHHHHhhccCCCCCccceeEEEEe-----CCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 009980           85 TNEILVMRKIVENVSPHPNVIDLYDVYED-----QNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALH  159 (521)
Q Consensus        85 ~~E~~~l~~l~~~~~~hpniv~~~~~~~~-----~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH  159 (521)
                      ..|..++..   ....||||+++++.+..     ...+|+|||||+||+|.+++... ..++..+..++.||+.||.|||
T Consensus        53 ~~e~~~~~~---~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~qi~~~L~~LH  128 (336)
T 3g2f_A           53 INEKNIYRV---PLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLH-TSDWVSSCRLAHSVTRGLAYLH  128 (336)
T ss_dssp             HHHHHHHTS---TTCCCTTBCCEEEEEEEECTTSCEEEEEEECCCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHH---HhccCcchhhheecccccccCCCceEEEEEecCCCCcHHHHHhhc-ccchhHHHHHHHHHHHHHHHHH
Confidence            333333221   12399999999986543     33678999999999999999764 4699999999999999999999


Q ss_pred             HC---------CCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCC---------CCcccccCCccccccccccc---
Q 009980          160 QA---------NIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYT---------DPVVGLFGSIDYVSPEALLQ---  218 (521)
Q Consensus       160 ~~---------~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~---------~~~~~~~gt~~y~aPE~~~~---  218 (521)
                      ++         ||+||||||+|||+   +.++.+||+|||+|+.....         ......+||+.|+|||++.+   
T Consensus       129 ~~~~~~~~~~~~ivH~Dikp~Nill---~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  205 (336)
T 3g2f_A          129 TELPRGDHYKPAISHRDLNSRNVLV---KNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVN  205 (336)
T ss_dssp             CCBCCGGGCBCCEECSSCSGGGEEE---CTTSCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCC
T ss_pred             hhhccccccccceeecccccceEEE---cCCCcEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcc
Confidence            99         99999999999999   77789999999999764321         11234579999999999976   


Q ss_pred             ----CCCCchhhhHHHHHHHHHHHhCCCCCCCCCc-H----------------HHHHHHHc-CC--CCCch--hhhhccC
Q 009980          219 ----DRITSKSDMWSLGVILYILLSGYPPFIAQSN-R----------------QKQQMIMA-GE--FSFYE--QTWKNIS  272 (521)
Q Consensus       219 ----~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-~----------------~~~~~i~~-~~--~~~~~--~~~~~~s  272 (521)
                          ..++.++|||||||++|+|++|..||..... .                ........ ..  ..++.  .....++
T Consensus       206 ~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (336)
T 3g2f_A          206 LRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAV  285 (336)
T ss_dssp             GGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHH
T ss_pred             cccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchH
Confidence                4567789999999999999999776633221 1                11111111 11  11111  1112356


Q ss_pred             HHHHHHHHHhccCCCCCCCCHHHHH------cCCcccCCC
Q 009980          273 SSAKQLISSLLTVDPNRRPSAQELL------NHPWVIGDS  306 (521)
Q Consensus       273 ~~~~~li~~~l~~dp~~R~t~~~~l------~h~~~~~~~  306 (521)
                      +.+.+||.+||..||.+|||+.+++      -++|-++..
T Consensus       286 ~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~~~~  325 (336)
T 3g2f_A          286 RSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWERNKS  325 (336)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC---
T ss_pred             HHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHhccc
Confidence            6899999999999999999999995      467765443

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=100.00  E-value=6.5e-42  Score=365.67  Aligned_cols=254  Identities=29%  Similarity=0.394  Sum_probs=211.5

Q ss_pred             cccccceeecccccccCceEEEEeEEccCC-CcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCG-ETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALL   84 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (521)
                      +...++|++.+.||+|+||.||+|+++..+ .+..||||.+.....                           ......+
T Consensus       386 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~---------------------------~~~~~~~  438 (656)
T 2j0j_A          386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTS---------------------------DSVREKF  438 (656)
T ss_dssp             BCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTC---------------------------HHHHHHH
T ss_pred             ccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCC---------------------------HHHHHHH
Confidence            344678999999999999999999987532 356799999753211                           1223568


Q ss_pred             HHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCC
Q 009980           85 TNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE-RYMEVGAAAVIRQIAEGLAALHQANI  163 (521)
Q Consensus        85 ~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qil~al~~lH~~~i  163 (521)
                      .+|+.+++++     +||||+++++++. ++..|+||||+.||+|.+++...+ .+++..+..++.||+.||.|||++||
T Consensus       439 ~~E~~~l~~l-----~HpnIv~l~~~~~-~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi  512 (656)
T 2j0j_A          439 LQEALTMRQF-----DHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRF  512 (656)
T ss_dssp             HHHHHHHHHC-----CCTTBCCEEEEEC-SSSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHhC-----CCCCCCeEEEEEe-cCceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            8999999998     9999999999984 567899999999999999998654 68999999999999999999999999


Q ss_pred             eeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC--cccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-C
Q 009980          164 VHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP--VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-G  240 (521)
Q Consensus       164 ~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g  240 (521)
                      +||||||+|||+   +.++.+||+|||+|+.......  .....||+.|+|||++.+..++.++||||+||++|+|++ |
T Consensus       513 vHrDikp~NILl---~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g  589 (656)
T 2j0j_A          513 VHRDIAARNVLV---SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHG  589 (656)
T ss_dssp             CCSCCSGGGEEE---EETTEEEECCCCCCCSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred             cccccchHhEEE---eCCCCEEEEecCCCeecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcC
Confidence            999999999999   5677899999999986543322  123457789999999998899999999999999999997 9


Q ss_pred             CCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          241 YPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       241 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      .+||.+.+..+....+..+.....   ...+|+.+.++|.+||..||.+|||+.++++
T Consensus       590 ~~Pf~~~~~~~~~~~i~~~~~~~~---~~~~~~~l~~li~~~l~~dP~~RPs~~el~~  644 (656)
T 2j0j_A          590 VKPFQGVKNNDVIGRIENGERLPM---PPNCPPTLYSLMTKCWAYDPSRRPRFTELKA  644 (656)
T ss_dssp             CCTTTTCCHHHHHHHHHHTCCCCC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHcCCCCCC---CccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            999999888888888777653322   2568999999999999999999999999986

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=100.00  E-value=1.2e-41  Score=327.98  Aligned_cols=228  Identities=19%  Similarity=0.179  Sum_probs=188.7

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      .+.++|++.+.||+|+||.||+|++..  +++.||||++.......                         ......+.+
T Consensus        28 ~~~~~y~i~~~lg~G~~g~Vy~a~~~~--~~~~vavK~~~~~~~~~-------------------------~~~~~~~~~   80 (286)
T 3uqc_A           28 IANGRYRLLIFHGGVPPLQFWQALDTA--LDRQVALTFVDPQGVLP-------------------------DDVLQETLS   80 (286)
T ss_dssp             ETTTTEEEEEEEEBSTTCEEEEEEETT--TTEEEEEEESCTTCCSC-------------------------HHHHHHHHH
T ss_pred             EecCcEEEEEEEcccCCeEEEEEEecC--CCceEEEEEECcccccC-------------------------HHHHHHHHH
Confidence            677899999999999999999999987  78999999986532211                         112345788


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHR  166 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~  166 (521)
                      |+.++.++     +||||+++++++.+++..|+||||+.|++|.+++.. + ....++..++.||+.||.|||++||+||
T Consensus        81 e~~~l~~l-----~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~-~-~~~~~~~~i~~ql~~aL~~lH~~givH~  153 (286)
T 3uqc_A           81 RTLRLSRI-----DKPGVARVLDVVHTRAGGLVVAEWIRGGSLQEVADT-S-PSPVGAIRAMQSLAAAADAAHRAGVALS  153 (286)
T ss_dssp             HHHHHHTC-----CCTTBCCEEEEEEETTEEEEEEECCCEEEHHHHHTT-C-CCHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred             HHHHHhcC-----CCCCcceeeEEEEECCcEEEEEEecCCCCHHHHHhc-C-CChHHHHHHHHHHHHHHHHHHHCCCccC
Confidence            99998888     999999999999999999999999999999999854 3 4667899999999999999999999999


Q ss_pred             cCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCC
Q 009980          167 DLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIA  246 (521)
Q Consensus       167 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~  246 (521)
                      ||||+|||+   +.++.+||+++|                   |++       +++.++|||||||++|+|++|+.||.+
T Consensus       154 Dikp~NIll---~~~g~~kl~~~~-------------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~  204 (286)
T 3uqc_A          154 IDHPSRVRV---SIDGDVVLAYPA-------------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPE  204 (286)
T ss_dssp             CCSGGGEEE---ETTSCEEECSCC-------------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCC
T ss_pred             CCCcccEEE---cCCCCEEEEecc-------------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCc
Confidence            999999999   667889987433                   444       378999999999999999999999987


Q ss_pred             CCcHHHH---HHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          247 QSNRQKQ---QMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       247 ~~~~~~~---~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      .+.....   .....+....+......+|++++++|.+||..||.+| |+.++++
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~  258 (286)
T 3uqc_A          205 AGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLN  258 (286)
T ss_dssp             CSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHH
T ss_pred             CCcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHH
Confidence            6653311   1112233333344556799999999999999999999 9999997

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=100.00  E-value=2e-42  Score=351.13  Aligned_cols=247  Identities=16%  Similarity=0.196  Sum_probs=190.1

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ..|.+.+.||+|+||+||+|++..  +++.||||++.......                         ......+.+|+.
T Consensus        78 ~~~~~~~~LG~G~fG~Vy~a~~~~--~g~~vAvK~~~~~~~~~-------------------------~~~~~~~~~E~~  130 (413)
T 3dzo_A           78 RTLVRGTVLGQEDPYAYLEATDQE--TGESFEVHVPYFTERPP-------------------------SNAIKQMKEEVL  130 (413)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETT--TCCEEEEEEECCSCC-----------------------------CCHHHHHHHH
T ss_pred             eeEEEecccccCCCEEEEEEEecC--CCCceEEEEEecCCCcc-------------------------HHHHHHHHHHHH
Confidence            458889999999999999999988  78899999986332211                         112345788888


Q ss_pred             HHHHHhhccCCC-CC---------------------ccceeEEEEe-----CCeEEEEEeccCCCchHHHHHh-------
Q 009980           90 VMRKIVENVSPH-PN---------------------VIDLYDVYED-----QNGVHLILELCSGGELFDRIVA-------  135 (521)
Q Consensus        90 ~l~~l~~~~~~h-pn---------------------iv~~~~~~~~-----~~~~~lv~e~~~gg~L~~~l~~-------  135 (521)
                      +++.+     .| +|                     ...+..++..     ...++++|+++ +++|.+++..       
T Consensus       131 ~~~~l-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~  204 (413)
T 3dzo_A          131 RLRLL-----RGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSST  204 (413)
T ss_dssp             GGGGS-----TTCCSHHHHHHHTCBCCCCEEEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTT
T ss_pred             HHHhh-----ccCCCHHHHHHhcccccchhhcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhccccc
Confidence            88776     44 21                     1112222222     23467888877 5699888842       


Q ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccc
Q 009980          136 QERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEA  215 (521)
Q Consensus       136 ~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~  215 (521)
                      ...+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+++.....  ....+| +.|+|||+
T Consensus       205 ~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDiKp~NILl---~~~~~~kL~DFG~a~~~~~~--~~~~~g-~~y~aPE~  278 (413)
T 3dzo_A          205 HKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVL---DQRGGVFLTGFEHLVRDGAS--AVSPIG-RGFAPPET  278 (413)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE---CTTCCEEECCGGGCEETTEE--ECCCCC-TTTCCHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcccceEEE---ecCCeEEEEeccceeecCCc--cccCCC-CceeCchh
Confidence            2347788899999999999999999999999999999999   77888999999999865432  445578 99999999


Q ss_pred             c----------ccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccC
Q 009980          216 L----------LQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTV  285 (521)
Q Consensus       216 ~----------~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~  285 (521)
                      +          .+..|+.++|||||||++|+|++|+.||.+.+..+....+        ...+..+|+.+++||.+||..
T Consensus       279 ~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~--------~~~~~~~~~~~~~li~~~l~~  350 (413)
T 3dzo_A          279 TAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWI--------FRSCKNIPQPVRALLEGFLRY  350 (413)
T ss_dssp             HHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSCSGGG--------GSSCCCCCHHHHHHHHHHTCS
T ss_pred             hhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhhHHHH--------HhhcccCCHHHHHHHHHHccC
Confidence            9          5556888999999999999999999999876554332222        122346899999999999999


Q ss_pred             CCCCCCCHHHHHcCCccc
Q 009980          286 DPNRRPSAQELLNHPWVI  303 (521)
Q Consensus       286 dp~~R~t~~~~l~h~~~~  303 (521)
                      ||.+|||+.++++||||.
T Consensus       351 dP~~Rpt~~~~l~~~~~~  368 (413)
T 3dzo_A          351 PKEDRLLPLQAMETPEYE  368 (413)
T ss_dssp             SGGGSCCHHHHTTSHHHH
T ss_pred             ChhhCcCHHHHHhCHHHH
Confidence            999999999999999995

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=100.00  E-value=2.6e-41  Score=364.40  Aligned_cols=245  Identities=21%  Similarity=0.334  Sum_probs=199.6

Q ss_pred             ccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHH
Q 009980            5 TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALL   84 (521)
Q Consensus         5 ~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (521)
                      +..+.++|++.+.||+|+||.||+|+++.. +++.||||++.....                           ......+
T Consensus        75 g~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~-~~~~vaiK~~~~~~~---------------------------~~~~~~~  126 (681)
T 2pzi_A           75 GDIVAGQYEVKGCIAHGGLGWIYLALDRNV-NGRPVVLKGLVHSGD---------------------------AEAQAMA  126 (681)
T ss_dssp             TCEETTTEEEEEEEEEETTEEEEEEEEGGG-TTEEEEEEESCSSCC---------------------------HHHHHHH
T ss_pred             CCEeCCceEEEEEEeeCCCeEEEEEEEcCC-CCcEEEEEEeCccCC---------------------------HHHHHHH
Confidence            456779999999999999999999999742 468899999853211                           1223457


Q ss_pred             HHHHHHHHHHhhccCCCCCccceeEEEEeCCe-----EEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 009980           85 TNEILVMRKIVENVSPHPNVIDLYDVYEDQNG-----VHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALH  159 (521)
Q Consensus        85 ~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~-----~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH  159 (521)
                      .+|+.+++++     +||||+++++++...+.     .||||||++|++|.+.+..  .+++.++..++.||+.||.|||
T Consensus       127 ~~E~~~l~~l-----~hp~iv~~~~~~~~~~~~~~~~~~lv~E~~~g~~L~~~~~~--~l~~~~~~~~~~qi~~aL~~lH  199 (681)
T 2pzi_A          127 MAERQFLAEV-----VHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQ--KLPVAEAIAYLLEILPALSYLH  199 (681)
T ss_dssp             HHHHGGGGGC-----CCTTBCCEEEEEEEECTTSCEEEEEEEECCCCEECC----C--CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhc-----CCCCcCeEeeeEeecCCCCCceeEEEEEeCCCCcHHHHHhC--CCCHHHHHHHHHHHHHHHHHHH
Confidence            7899998888     99999999999987765     7999999999999987654  7999999999999999999999


Q ss_pred             HCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh
Q 009980          160 QANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS  239 (521)
Q Consensus       160 ~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~  239 (521)
                      ++||+||||||+|||+   +. +.+||+|||+++.....   ...+||+.|+|||++.+. ++.++|||||||++|+|++
T Consensus       200 ~~giiHrDlkp~NIll---~~-~~~kl~DFG~a~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~  271 (681)
T 2pzi_A          200 SIGLVYNDLKPENIML---TE-EQLKLIDLGAVSRINSF---GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTL  271 (681)
T ss_dssp             HTTEECCCCSGGGEEE---CS-SCEEECCCTTCEETTCC---SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHS
T ss_pred             HCCCeecccChHHeEE---eC-CcEEEEecccchhcccC---CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHh
Confidence            9999999999999999   33 38999999999865432   445799999999998765 5899999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcc
Q 009980          240 GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV  302 (521)
Q Consensus       240 g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~  302 (521)
                      |.+||.+.....         .. .......+++.+.++|.+||..||.+||+..+.+.|+|.
T Consensus       272 g~~~~~~~~~~~---------~~-~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~  324 (681)
T 2pzi_A          272 DLPTRNGRYVDG---------LP-EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLT  324 (681)
T ss_dssp             CCCEETTEECSS---------CC-TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred             CCCCCccccccc---------cc-ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHH
Confidence            999986532111         11 111223467899999999999999999999988888875

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=100.00  E-value=5.7e-34  Score=298.88  Aligned_cols=238  Identities=15%  Similarity=0.084  Sum_probs=158.1

Q ss_pred             cccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHHhh
Q 009980           17 ILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVE   96 (521)
Q Consensus        17 ~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~   96 (521)
                      ..+.|+.|.+..++...  .|+.||+|++.+......                  ....+.......+.+|+.+|+++  
T Consensus       241 ~~~~~~~~~h~~~rr~~--fg~~~~~K~~~~~~~~~~------------------~~~~~~~~~~~~~~~E~~~l~~~--  298 (569)
T 4azs_A          241 QPYAGAGLAHKRSRRYF--FGEDYVCKFFYYDMPHGI------------------LTAEESQRNKYELHNEIKFLTQP--  298 (569)
T ss_dssp             C-C--------CCEEEE--ECSSEEEEEEESSCSTTC------------------SCHHHHHHHHHHHHHHHHHHHSC--
T ss_pred             ccccCCccccccccccc--ccceeEEEEEeccccccc------------------chhhhhHHHHHHHHHHHHHHHhc--
Confidence            46678888888887777  778899999987543221                  11122223345688899999887  


Q ss_pred             ccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEe
Q 009980           97 NVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFL  176 (521)
Q Consensus        97 ~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~~  176 (521)
                        ..||||+++++++++++.+|||||||+|++|.++|...+++++.   .|+.||+.||.|||++||+||||||+|||+ 
T Consensus       299 --~~~~~i~~~~~~~ed~~~~yLVMEyv~G~~L~d~i~~~~~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL-  372 (569)
T 4azs_A          299 --PAGFDAPAVLAHGENAQSGWLVMEKLPGRLLSDMLAAGEEIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMV-  372 (569)
T ss_dssp             --CTTCCCCCEEEEEECSSEEEEEEECCCSEEHHHHHHTTCCCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEE-
T ss_pred             --CCCCCeeEEEEEEEECCEEEEEEecCCCCcHHHHHHhCCCCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEE-
Confidence              58999999999999999999999999999999999999888875   478999999999999999999999999999 


Q ss_pred             eCCCCCCEEEeecCCCccCCCC-CCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCcHHHHHH
Q 009980          177 NDREDSPLKIMDFGLSSVEGYT-DPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQM  255 (521)
Q Consensus       177 ~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~  255 (521)
                        +.++.+||+|||+|+..... ....+.+||+.|||||++.+ .+..++|+||+|+++|.+.++..|+.        ..
T Consensus       373 --~~dg~vKL~DFGlAr~~~~~~~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~~~--------~~  441 (569)
T 4azs_A          373 --DARQHARLIDFGSIVTTPQDCSWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSNWL--------YA  441 (569)
T ss_dssp             --CTTSCEEECCCTTEESCC---CCSHHHHHHHHHHHHHHC------------------CCCCTTHHHHH--------HH
T ss_pred             --CCCCCEEEeecccCeeCCCCCccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccchhH--------HH
Confidence              77889999999999865433 23455689999999999975 46778999999999888766554431        11


Q ss_pred             HHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcc
Q 009980          256 IMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV  302 (521)
Q Consensus       256 i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~  302 (521)
                      +..    .+...     ..+..+...+...+|..||.......|+|.
T Consensus       442 l~~----~~~~~-----~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~  479 (569)
T 4azs_A          442 VWQ----EPVER-----WNFVLLLALFEKKAKLPSAEQQRGATEQWI  479 (569)
T ss_dssp             HHT----SCGGG-----CSHHHHHHHHHTGGGSCCGGGSSCCHHHHH
T ss_pred             hhc----CCCCC-----CcHHHHHHHHhCCCCCCCCChhhhccchhH
Confidence            111    01111     123455566666777777766665556654

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.95  E-value=1e-28  Score=257.68  Aligned_cols=189  Identities=18%  Similarity=0.254  Sum_probs=144.4

Q ss_pred             ecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHH
Q 009980           14 VTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRK   93 (521)
Q Consensus        14 ~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~   93 (521)
                      ..+.||+|+||.||+|..    .++.+|+|..........                    ..........+.+|+.++++
T Consensus       340 ~~~~LG~G~fg~Vy~~~~----~~~~~~~k~~~~~~~~~~--------------------~~~~~~~~~~~~~E~~il~~  395 (540)
T 3en9_A          340 PEHLIGKGAEADIKRDSY----LDFDVIIKERVKKGYRDE--------------------RLDENIRKSRTAREARYLAL  395 (540)
T ss_dssp             --------CCEEEEEEEC----SSCEEEEEEECCCTTSCH--------------------HHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCEEeeCCCEEEEEEEE----CCCeEEEEEEecccccch--------------------hhhhHHHHHHHHHHHHHHHh
Confidence            356899999999999943    567899998754221110                    00111123457899999999


Q ss_pred             HhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q 009980           94 IVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENC  173 (521)
Q Consensus        94 l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Ni  173 (521)
                      +     +||||+++..++...+..|||||||+|++|.+++..        +..++.|++.||.|||++||+||||||+||
T Consensus       396 l-----~h~nIv~~~~~~~~~~~~~lVmE~~~ggsL~~~l~~--------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NI  462 (540)
T 3en9_A          396 V-----KDFGIPAPYIFDVDLDNKRIMMSYINGKLAKDVIED--------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNF  462 (540)
T ss_dssp             G-----GGGTCCCCCEEEEETTTTEEEEECCCSEEHHHHSTT--------CTHHHHHHHHHHHHHHHTTEECTTCCTTSE
T ss_pred             c-----CCCCcCceEEEEEeCCccEEEEECCCCCCHHHHHHH--------HHHHHHHHHHHHHHHHHCcCccCCCCHHHE
Confidence            9     999999666666677788999999999999998865        668999999999999999999999999999


Q ss_pred             EEeeCCCCCCEEEeecCCCccCCCCCC--------cccccCCccccccccccc--CCCCchhhhHHHHHHHHHHHhCCCC
Q 009980          174 LFLNDREDSPLKIMDFGLSSVEGYTDP--------VVGLFGSIDYVSPEALLQ--DRITSKSDMWSLGVILYILLSGYPP  243 (521)
Q Consensus       174 l~~~~~~~~~~kl~Dfg~a~~~~~~~~--------~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~~ll~g~~p  243 (521)
                      |+   +.  .+||+|||+|+.......        ....+||+.|||||++..  ..|+..+|+||..+-..+-..++.+
T Consensus       463 Ll---~~--~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~r  537 (540)
T 3en9_A          463 IF---DK--DLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRAR  537 (540)
T ss_dssp             EE---SS--SEEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSC
T ss_pred             EE---CC--eEEEEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccc
Confidence            99   44  899999999987654322        135679999999999986  6788899999999888887777766


Q ss_pred             C
Q 009980          244 F  244 (521)
Q Consensus       244 f  244 (521)
                      |
T Consensus       538 Y  538 (540)
T 3en9_A          538 Y  538 (540)
T ss_dssp             C
T ss_pred             c
Confidence            6

>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}

Probab=99.94  E-value=8.4e-27  Score=211.35  Aligned_cols=186  Identities=20%  Similarity=0.320  Sum_probs=144.8

Q ss_pred             cCCcccCCCCcchhchHHHHHHHHhHHHHhHHHHHHHHhhhhhHHHHhhHHHHHhhhccCCCCHHHHHHHHHHHHhhhcC
Q 009980          298 NHPWVIGDSAKEEEMDAEIVSRLQSFNARRKLRAAAIASVLSSTIFLRRTKKLKNLLGSHDLNEEEIQNLRIHFRTICAN  377 (521)
Q Consensus       298 ~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~l~~l~~~~~~~~~~~~~l~~~F~~~D~~  377 (521)
                      .|||.++.......+...++.++++|...++++.+++..+.                  ..++++++..++.+|..+|.|
T Consensus         8 ~~~~~~~~~~~~~~l~~~~~~~l~~f~~~~~lk~~~l~~i~------------------~~l~~~e~~~l~~~F~~~D~d   69 (197)
T 3pm8_A            8 SSGRENLYFQGHVELSSTLLKNLKNFKKENELKKIALTIIA------------------KHLCDVEINNLRNIFIALDVD   69 (197)
T ss_dssp             ---------CCSCCCCTTHHHHHHHTTTSCHHHHHHHHHHH------------------HHCCHHHHHHHHHHHHHHCTT
T ss_pred             cchHhhhccCCCCCCCHHHHHHHHHHHHccHHHHHHHHHHH------------------HHCCHHHHHHHHHHHHHHCCC
Confidence            48999998887778888899999999988888877664332                  126889999999999999999


Q ss_pred             CCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHH
Q 009980          378 GDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKE  456 (521)
Q Consensus       378 ~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~  456 (521)
                      ++| |+.+||..+++.+|...+..++..+|+.+|.|++|.|+|+||+.++........++.++.+|+.+|.|++|+|+.+
T Consensus        70 ~~G~Is~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~~g~I~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~  149 (197)
T 3pm8_A           70 NSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATIDKQTYLKKEVCLIPFKFFDIDGNGKISVE  149 (197)
T ss_dssp             CSSEECHHHHHHHHHHHC----CHHHHHHHHC-------CEEHHHHHHTTCCHHHHCSHHHHHHHHHHHCTTCSSEECHH
T ss_pred             CCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHhhhhHHHHHHHHHHHCCCCCCCCCHH
Confidence            999 9999999999999998888999999999999999999999999988776655677899999999999999999999


Q ss_pred             HHHHHHHhC--CCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhcC
Q 009980          457 EVASMLRAL--PDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRD  507 (521)
Q Consensus       457 e~~~~l~~~--~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~~  507 (521)
                      ||..++...  +..      .+++++..+|+.+|.|+||.|+|+||..+|+++
T Consensus       150 El~~~l~~~~~~~~------~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~  196 (197)
T 3pm8_A          150 ELKRIFGRDDIENP------LIDKAIDSLLQEVDLNGDGEIDFHEFMLMMSKK  196 (197)
T ss_dssp             HHHHHHC----CCH------HHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHCC
T ss_pred             HHHHHHHhcccCCC------CCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHcC
Confidence            999999876  322      566789999999999999999999999999864

>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A

Probab=99.93  E-value=6.2e-25  Score=198.02  Aligned_cols=184  Identities=18%  Similarity=0.307  Sum_probs=149.5

Q ss_pred             cCCcccCCCCcchhchHHHHHHHHhHHHHhHHHHHHHHhhhhhHHHHhhHHHHHhhhccCCCCHHHHHHHHHHHHhhhcC
Q 009980          298 NHPWVIGDSAKEEEMDAEIVSRLQSFNARRKLRAAAIASVLSSTIFLRRTKKLKNLLGSHDLNEEEIQNLRIHFRTICAN  377 (521)
Q Consensus       298 ~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~l~~l~~~~~~~~~~~~~l~~~F~~~D~~  377 (521)
                      .|||+.........++..+++++++|....+++.+++..+.                  ..++++++.+++++|..+|.|
T Consensus         3 ~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~l~~~~l~~~~------------------~~l~~~~~~~l~~~F~~~D~d   64 (191)
T 3k21_A            3 HHHHHSSGRENLYFQGIHVLENFKNYGLLLKFQKLAMTIIA------------------QQSNDYDVEKLKSTFLVLDED   64 (191)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------HHCCCHHHHHHHHHHHHHCTT
T ss_pred             CCccccCCccccccccHHHHHHHHHHHhhHHHHHHHHHHHH------------------HHCCHHHHHHHHHHHHHHCCC
Confidence            58888777777788889999999999999888887665332                  126889999999999999999


Q ss_pred             CCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHH
Q 009980          378 GDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKE  456 (521)
Q Consensus       378 ~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~  456 (521)
                      ++| |+.+||..+++.+|...+ .++..+|+.+|.|++|.|+|+||+.++.... ...++.++.+|+.+|.|++|+|+.+
T Consensus        65 ~~G~i~~~El~~~l~~~g~~~~-~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~-~~~~~~l~~~F~~~D~d~~G~Is~~  142 (191)
T 3k21_A           65 GKGYITKEQLKKGLEKDGLKLP-YNFDLLLDQIDSDGSGKIDYTEFIAAALDRK-QLSKKLIYCAFRVFDVDNDGEITTA  142 (191)
T ss_dssp             CSSEECHHHHHHHHHHTTCCCC-TTHHHHHHHHCTTCSSSEEHHHHHHHHSCGG-GCCHHHHHHHHHHHSTTCSSCBCHH
T ss_pred             CCCCCcHHHHHHHHHHcCCCcH-HHHHHHHHHhCCCCCCeEeHHHHHHHHHhhh-hccHHHHHHHHHHhCCCCCCcCCHH
Confidence            999 999999999999998887 8999999999999999999999999886544 3567889999999999999999999


Q ss_pred             HHHHHHHhCCCCCCCCCCCCh---hHHHHHHHHhcCCCCcceeHHHHHHHHh
Q 009980          457 EVASMLRALPDDCLPVDITEP---GKLDEIFDLMDANNDGKVTFDEFRAAMQ  505 (521)
Q Consensus       457 e~~~~l~~~~~~~~~~~~~~~---~~~~~~f~~~D~~~dG~I~~~Ef~~~~~  505 (521)
                      ||..++...+...    ..++   +++..+|+.+|.|+||.|+|+||..+|+
T Consensus       143 El~~~l~~~~~~~----~l~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~  190 (191)
T 3k21_A          143 ELAHILYNGNKKG----NITQRDVNRVKRMIRDVDKNNDGKIDFHEFSEMMK  190 (191)
T ss_dssp             HHHHHHHHSSSCS----CCCHHHHHHHHHHHHHHCSSSSSSBCHHHHHHHHC
T ss_pred             HHHHHHHhcCCCC----CCCHhHHHHHHHHHHHhcCCCCCeECHHHHHHHHc
Confidence            9999998742210    1333   3689999999999999999999999885

>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A

Probab=99.92  E-value=1.3e-24  Score=187.38  Aligned_cols=143  Identities=19%  Similarity=0.385  Sum_probs=132.8

Q ss_pred             CCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhc-cCCCcH
Q 009980          358 DLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSL-RKSQGD  435 (521)
Q Consensus       358 ~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~-~~~~~~  435 (521)
                      .+|++++++++++|..+|.|++| |+.+||..+++.++..++..++..++..+|.+++|.|++.||+..+... .....+
T Consensus         3 ~lt~eqi~el~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~   82 (148)
T 2lmt_A            3 ELTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCGIMAKQMRETDTE   82 (148)
T ss_dssp             SCCSHHHHHHHHHHHHHHCSSCCEEEGGGHHHHHHHHTCCCCHHHHHHHHHHHHTTSTTEEEHHHHHHHHHHTTTTTTTH
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCCeECHHHHHHHHHhcCCCchHHHHHHHHHhcccCCCCcccHHHHHHHHHHHhcccCcH
Confidence            47899999999999999999999 9999999999999999999999999999999999999999999988763 445567


Q ss_pred             HHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          436 DALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       436 ~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      +.++.+|+.||.|++|+|+.+||+.++..++..      .++++++.+|+.+|.|+||.|+|+||+++|++
T Consensus        83 ~~l~~aF~~~D~d~~G~I~~~El~~~l~~~g~~------~~~~e~~~l~~~~D~d~dG~I~~~EF~~~m~~  147 (148)
T 2lmt_A           83 EEMREAFKIFDRDGDGFISPAELRFVMINLGEK------VTDEEIDEMIREADFDGDGMINYEEFVWMISQ  147 (148)
T ss_dssp             HHHHHHHHHHHSSCSSEECHHHHHHHHHHHTCC------CCHHHHHHHHHHHCCSCCSSEEHHHHHHHHTT
T ss_pred             HHHHHHHHHHCCCCcCcCcHHHHHHHHHHcCcc------ccHHHHHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence            889999999999999999999999999988765      67889999999999999999999999999864

>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}

Probab=99.92  E-value=6.4e-25  Score=194.78  Aligned_cols=146  Identities=19%  Similarity=0.401  Sum_probs=134.2

Q ss_pred             ccCCCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCC-
Q 009980          355 GSHDLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKS-  432 (521)
Q Consensus       355 ~~~~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~-  432 (521)
                      ++.++|++++.+++++|..+|.|++| |+.+||..+|+.+|..++..++..++..+|.|++|.|+|.||+.++...... 
T Consensus         1 ga~~Lt~eqi~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~~~~d~d~~~~i~~~ef~~~~~~~~~~~   80 (176)
T 2lhi_A            1 GSSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSN   80 (176)
T ss_dssp             CCCCCCTTGGGHHHHHHHTTCSSCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTTCSSCSSSBCTTHHHHHHTSSCCSS
T ss_pred             CCCcCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCChhHHHHHHHHHHhCcCCCccchHHHHHHHHHHhcccC
Confidence            35678999999999999999999999 9999999999999999999999999999999999999999999988764433 


Q ss_pred             CcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhcC
Q 009980          433 QGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRD  507 (521)
Q Consensus       433 ~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~~  507 (521)
                      ..+++++.+|+.||.|++|+|+.+||+.++..++..      .++++++.+|+.+| |+||.|+|+||+++|+.+
T Consensus        81 ~~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~------~~~~ei~~l~~~~d-d~dG~I~~~EF~~~m~k~  148 (176)
T 2lhi_A           81 DSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEK------LTDAEVDDMLREVS-DGSGEINIQQFAALLSKG  148 (176)
T ss_dssp             HHHHHHHHHHHHHCSSCSSSBCHHHHHHHHHTTTCC------CCHHHHHHHHHHHH-TTSSCBCTTHHHHHHTCC
T ss_pred             CcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCcc------cchHHHHHHHHhhc-CCCCeEeHHHHHHHHHhc
Confidence            356789999999999999999999999999988765      77889999999999 999999999999999873

>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}

Probab=99.91  E-value=5.7e-24  Score=206.13  Aligned_cols=146  Identities=23%  Similarity=0.448  Sum_probs=132.4

Q ss_pred             hccCCCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhc-cC
Q 009980          354 LGSHDLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSL-RK  431 (521)
Q Consensus       354 ~~~~~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~-~~  431 (521)
                      .+...++++|+++++++|+.+|.|++| |+.+||..+|+.+|..++.+++.++|+.+|.|++|.|+|+||+.++... ..
T Consensus       291 Ps~E~Lt~EEI~ELREaF~~fDkDgdG~IS~eELk~aLrsLG~~~TeeEI~~Lf~~~D~DgDG~IdFeEFl~lms~~lk~  370 (440)
T 3u0k_A          291 PTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLIMMARKMKD  370 (440)
T ss_dssp             CBCBCCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCSSSEEHHHHHHHHHTC---
T ss_pred             hhHhhhhHHHHHHHHHHHHHHcCCCCCEECHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcC
Confidence            345778999999999999999999999 9999999999999999999999999999999999999999999988764 33


Q ss_pred             CCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHh
Q 009980          432 SQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQ  505 (521)
Q Consensus       432 ~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~  505 (521)
                      ...+++++.+|+.||.|++|+|+.+||+.++..++..      +++++++.+|+.+|.|+||.|+|+||+++|.
T Consensus       371 ~d~eeeLreAFk~fDkDgdG~IS~eELr~vL~~lGe~------LSdeEIdeLfke~D~DgDGkIsyeEFvkmMt  438 (440)
T 3u0k_A          371 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK------LTDEEVDEMIREADIDGDGQVNYEEFVQMMT  438 (440)
T ss_dssp             ---CHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCC------CCHHHHHHHHHHHCTTCSSSEEHHHHHHHHC
T ss_pred             CChHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCCC------CCHHHHHHHHHHhCCCCCCcEeHHHHHHHhC
Confidence            4456789999999999999999999999999988765      7788999999999999999999999999985

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.91  E-value=4.1e-25  Score=211.47  Aligned_cols=162  Identities=20%  Similarity=0.201  Sum_probs=114.9

Q ss_pred             eeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHH
Q 009980           12 YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVM   91 (521)
Q Consensus        12 Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l   91 (521)
                      |.+++.||+|+||.||+|.+ .  +++.||||+++.........         .....++ ...........+.+|+.++
T Consensus        92 ~~~~~~iG~G~~g~Vy~~~~-~--~g~~valK~~~~~~~~~~~~---------~~~~~~~-~~~w~~~~~~~~~~E~~~l  158 (282)
T 1zar_A           92 DAIGKLMGEGKESAVFNCYS-E--KFGECVVKFHKVGHTSFKKV---------KEKRDYG-DLHFSVLAIRSARNEFRAL  158 (282)
T ss_dssp             SEEEEEEEECSSEEEEEEEE-T--TTEEEEEEEECC------CC---------CC--------CHHHHHHHHHHHHHHHH
T ss_pred             EEecCEeccCCCceEEEEEe-C--CCCEEEEEEEECCCCchhhh---------hhhhhhc-chhhHHHHHHHHHHHHHHH
Confidence            44449999999999999999 5  78899999996532211000         0000000 0000001345688999999


Q ss_pred             HHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCC
Q 009980           92 RKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPE  171 (521)
Q Consensus        92 ~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~  171 (521)
                      +++     .  | +++.+++.. +..|+||||++|++|.+ +.      ......++.|++.||.|||++||+||||||+
T Consensus       159 ~~l-----~--~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~------~~~~~~i~~qi~~~l~~lH~~giiHrDlkp~  222 (282)
T 1zar_A          159 QKL-----Q--G-LAVPKVYAW-EGNAVLMELIDAKELYR-VR------VENPDEVLDMILEEVAKFYHRGIVHGDLSQY  222 (282)
T ss_dssp             HHT-----T--T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CC------CSCHHHHHHHHHHHHHHHHHTTEECSCCSTT
T ss_pred             Hhc-----c--C-CCcCeEEec-cceEEEEEecCCCcHHH-cc------hhhHHHHHHHHHHHHHHHHHCCCEeCCCCHH
Confidence            998     5  4 555555544 45699999999999987 31      2345679999999999999999999999999


Q ss_pred             cEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCccccccccccc
Q 009980          172 NCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQ  218 (521)
Q Consensus       172 Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~  218 (521)
                      |||+   + ++.+||+|||+|+.            +..++|||.+.+
T Consensus       223 NILl---~-~~~vkl~DFG~a~~------------~~~~~a~e~l~r  253 (282)
T 1zar_A          223 NVLV---S-EEGIWIIDFPQSVE------------VGEEGWREILER  253 (282)
T ss_dssp             SEEE---E-TTEEEECCCTTCEE------------TTSTTHHHHHHH
T ss_pred             HEEE---E-CCcEEEEECCCCeE------------CCCCCHHHHHHH
Confidence            9999   4 78899999999963            334789998753

>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A

Probab=99.91  E-value=7.8e-24  Score=181.41  Aligned_cols=140  Identities=20%  Similarity=0.377  Sum_probs=126.8

Q ss_pred             CHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhcc-CCCcHHH
Q 009980          360 NEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLR-KSQGDDA  437 (521)
Q Consensus       360 ~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~-~~~~~~~  437 (521)
                      +++++.+++.+|..+|.|++| |+.+||..+|+.+|..++.+++..+++.+|.|++|.|+|+||+.++.... ...+.+.
T Consensus         1 ~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~   80 (143)
T 2obh_A            1 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEE   80 (143)
T ss_dssp             CHHHHHHHHHHHHTTCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeeeHHHHHHHHHHHhccccHHHH
Confidence            457788999999999999999 99999999999999999999999999999999999999999999876532 2234567


Q ss_pred             HHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHh
Q 009980          438 LRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQ  505 (521)
Q Consensus       438 l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~  505 (521)
                      ++.+|+.||.|++|+|+.+||+.++..++..      .+++++..+|+.+|.|+||.|+|+||..+|.
T Consensus        81 l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~------~~~~~~~~~~~~~D~d~dG~I~~~eF~~~~~  142 (143)
T 2obh_A           81 ILKAFKLFDDDETGKISFKNLKRVAKELGEN------LTDEELQEMIDEADRDGDGEVSEQEFLRIMK  142 (143)
T ss_dssp             HHHHHHHHCTTCSSSBCHHHHHHHHHHTTCC------CCHHHHHHHHHHHCTTSSSSBCHHHHHHHHC
T ss_pred             HHHHHHHhCCCCCCcCcHHHHHHHHHHhCCC------CCHHHHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence            9999999999999999999999999988765      6788999999999999999999999999875

>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C

Probab=99.90  E-value=9.2e-24  Score=183.90  Aligned_cols=144  Identities=17%  Similarity=0.337  Sum_probs=128.5

Q ss_pred             CCCHHHHHHHHHHHHhhhc--CCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccC---
Q 009980          358 DLNEEEIQNLRIHFRTICA--NGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRK---  431 (521)
Q Consensus       358 ~~~~~~~~~l~~~F~~~D~--~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~---  431 (521)
                      .+|++++++++++|..||.  |++| |+..||..+|+.+|..++..++.+++. .|.+++|.|+|+||+.++.....   
T Consensus         2 qLt~eqi~elre~F~~fD~~~d~dG~I~~~El~~~lr~lG~~~t~~el~~~~~-~d~~~~g~i~f~eFl~~~~~~~~~~~   80 (159)
T 3i5g_C            2 QLTKDEIEEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTEAQVHQHGG-TKKMGEKAYKLEEILPIYEEMSSKDT   80 (159)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHTTSSSCEEGGGHHHHHHHTTCCCCHHHHHTTTC-CSSTTSCEECHHHHHHHHHHHTTCCT
T ss_pred             CCCHHHHHHHHHHHHHHCcCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHc-ccccCCCcccHHHHHHHHHHhhcccc
Confidence            4789999999999999996  8899 999999999999999999988888764 47889999999999998876432   


Q ss_pred             CCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcC--CCCcceeHHHHHHHHhcCc
Q 009980          432 SQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDA--NNDGKVTFDEFRAAMQRDS  508 (521)
Q Consensus       432 ~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~--~~dG~I~~~Ef~~~~~~~~  508 (521)
                      ....++++.+|+.||+|++|+|+.+||++++..+|..      +++++++.+++.+|.  |+||.|+|+||+++|..+|
T Consensus        81 ~~~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~------ls~~e~~~l~~~~D~~~d~dG~I~~~EF~~~m~~~p  153 (159)
T 3i5g_C           81 GTAADEFMEAFKTFDREGQGLISSAEIRNVLKMLGER------ITEDQCNDIFTFCDIREDIDGNIKYEDLMKKVMAGP  153 (159)
T ss_dssp             TCCHHHHHHHHHHHCTTSSSEECHHHHHHHHHHSSSC------CCHHHHHHHHHHTTCCCCSSCCEEHHHHHHHHHHCS
T ss_pred             cchHHHHHHHHHHHhcCCCCcCcHHHHHHHHHHhCCC------CCHHHHHHHHHHhCcCCCCCCeEeHHHHHHHHHCCC
Confidence            3456789999999999999999999999999998876      788899999999995  8899999999999988754

>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...

Probab=99.89  E-value=8.1e-23  Score=176.13  Aligned_cols=143  Identities=22%  Similarity=0.435  Sum_probs=129.7

Q ss_pred             CCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhc-cCCCcH
Q 009980          358 DLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSL-RKSQGD  435 (521)
Q Consensus       358 ~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~-~~~~~~  435 (521)
                      .++++++.+++.+|..+|.|++| |+.+||..+++.+|..++..++..+|+.+|.|++|.|+|+||+.++... ......
T Consensus         3 ~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~   82 (148)
T 1exr_A            3 QLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSE   82 (148)
T ss_dssp             CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHhcccCCCcH
Confidence            47888999999999999999999 9999999999999999998999999999999999999999999988653 223345


Q ss_pred             HHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          436 DALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       436 ~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      +.+..+|+.+|.|++|+|+.+||..++..++..      ++++++..+|+.+|.|+||.|+|+||..+|..
T Consensus        83 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~------~~~~~~~~~~~~~d~d~dg~i~~~eF~~~~~~  147 (148)
T 1exr_A           83 EELIEAFKVFDRDGNGLISAAELRHVMTNLGEK------LTDDEVDEMIREADIDGDGHINYEEFVRMMVS  147 (148)
T ss_dssp             HHHHHHHHHHSTTCSSCBCHHHHHHHHHHTTCC------CCHHHHHHHHHHHCSSSSSSBCHHHHHHHHHC
T ss_pred             HHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCC------CCHHHHHHHHHHhCCCCCCcEeHHHHHHHHcc
Confidence            679999999999999999999999999988764      67889999999999999999999999998863

>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B

Probab=99.89  E-value=6.3e-23  Score=177.36  Aligned_cols=142  Identities=15%  Similarity=0.312  Sum_probs=126.7

Q ss_pred             cCCCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhcc-CCC
Q 009980          356 SHDLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLR-KSQ  433 (521)
Q Consensus       356 ~~~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~-~~~  433 (521)
                      ...+|++++++++++|..+|.|++| |+.+||..+|+.+|..++..++..++    .+++|.|+|.+|+.++.... ...
T Consensus         7 ~~~Lt~~qi~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~----~~~~~~i~f~ef~~~~~~~~~~~~   82 (153)
T 3i5g_B            7 RVKLSQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAML----KECPGQLNFTAFLTLFGEKVSGTD   82 (153)
T ss_dssp             CTTCCHHHHHHHHHHHHHHCCSTTSCCCHHHHHHHHHHTTSCCCHHHHHHHH----HTSSSCCCSHHHHHTTTTTTTTCC
T ss_pred             ccCCCHHHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCccHHHHHHHH----HhccCCccHHHHHHHHHhhhcccc
Confidence            4568999999999999999999999 99999999999999999887776665    46778899999999887643 344


Q ss_pred             cHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhcCc
Q 009980          434 GDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDS  508 (521)
Q Consensus       434 ~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~~~  508 (521)
                      +++.++.+|+.||+|++|+|+.+||+.++..+|.+      +++++++.+++.+|.| ||.|+|+||+++|....
T Consensus        83 ~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~------ls~~ei~~~~~~~D~~-dG~I~y~EF~~~m~~~~  150 (153)
T 3i5g_B           83 PEDALRNAFSMFDEDGQGFIPEDYLKDLLENMGDN------FSKEEIKNVWKDAPLK-NKQFNYNKMVDIKGKAE  150 (153)
T ss_dssp             CHHHHHHHHHTTCSSCSSCCCHHHHHHHHHSSSSC------CCHHHHHHHHTTCCEE-TTEECHHHHHHHHHCSC
T ss_pred             cHHHHHHHHhccccCCCCeEeHHHHHHHHHHcCCc------CCHHHHHHHHHHhCCC-cCEEcHHHHHHHhcCCC
Confidence            67889999999999999999999999999998865      7888999999999988 99999999999998743

>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A

Probab=99.89  E-value=2.2e-22  Score=177.51  Aligned_cols=147  Identities=22%  Similarity=0.393  Sum_probs=131.6

Q ss_pred             cCCCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhcc-CCC
Q 009980          356 SHDLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLR-KSQ  433 (521)
Q Consensus       356 ~~~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~-~~~  433 (521)
                      ...++++++.+++.+|..+|.|++| |+.+||..+++.+|...+.+++..+|..+|.|++|.|+|+||+.++.... ...
T Consensus        19 ~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~   98 (169)
T 3qrx_A           19 RVGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERD   98 (169)
T ss_dssp             -CCCCHHHHHHHHHHHHHHCTTCCSEECHHHHHHHHHHTSCCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHhcccC
Confidence            4668999999999999999999999 99999999999999999999999999999999999999999999987632 223


Q ss_pred             cHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhcCc
Q 009980          434 GDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDS  508 (521)
Q Consensus       434 ~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~~~  508 (521)
                      ..+.+..+|+.+|.|++|+|+.+||..++..++..      .+++++..+|+.+|.|+||.|+|+||..+|+..+
T Consensus        99 ~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~------~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~  167 (169)
T 3qrx_A           99 SREEILKAFRLFDDDNSGTITIKDLRRVAKELGEN------LTEEELQEMIAEADRNDDNEIDEDEFIRIMKKTS  167 (169)
T ss_dssp             HHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCC------CCHHHHHHHHHHHCCSSSSCBCHHHHHHHHC---
T ss_pred             cHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCC------CCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHhcc
Confidence            45679999999999999999999999999988754      6788999999999999999999999999998754

>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A

Probab=99.89  E-value=4e-22  Score=174.21  Aligned_cols=146  Identities=19%  Similarity=0.292  Sum_probs=134.2

Q ss_pred             ccCCCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhh-ccCC
Q 009980          355 GSHDLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSS-LRKS  432 (521)
Q Consensus       355 ~~~~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~-~~~~  432 (521)
                      ....++++++.+++.+|..+|.+++| |+.+||..+++.+|...+.+++..+|+.+|.+++|.|+|+||+.++.. ....
T Consensus        13 ~~~~l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~   92 (161)
T 3fwb_A           13 LNSELLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFYIVMGEKILKR   92 (161)
T ss_dssp             TTTTSCHHHHHHHHHHHHHHCTTSSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSCEEHHHHHHHHHHHHHTC
T ss_pred             CCCCCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCCCCeEeHHHHHHHHHHHHhcC
Confidence            34668999999999999999999999 999999999999999999999999999999999999999999999876 3444


Q ss_pred             CcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          433 QGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       433 ~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      ...+.++.+|+.+|.|++|+|+.+||..++..++..      .+++++..+|+.+|.|+||.|+|+||..+|+.
T Consensus        93 ~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~------~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  160 (161)
T 3fwb_A           93 DPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGET------LTDEELRAMIEEFDLDGDGEINENEFIAICTD  160 (161)
T ss_dssp             CHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCC------CCHHHHHHHHHTTCSSSSSSEEHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhCCC------CCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence            567889999999999999999999999999988765      67889999999999999999999999999864

>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A

Probab=99.88  E-value=2.2e-22  Score=175.32  Aligned_cols=146  Identities=22%  Similarity=0.403  Sum_probs=132.7

Q ss_pred             CCCCHHHHHHHHHHHHhhh-cCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCC--
Q 009980          357 HDLNEEEIQNLRIHFRTIC-ANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKS--  432 (521)
Q Consensus       357 ~~~~~~~~~~l~~~F~~~D-~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~--  432 (521)
                      ..++++++.+++.+|..+| .|++| |+.+||..+++.+|..++..++..+|+.+|.|++|.|+|+||+.++......  
T Consensus         5 ~~l~~~~~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~~~~~~   84 (158)
T 2jnf_A            5 SKLSSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGARFLGEEV   84 (158)
T ss_dssp             TTSCHHHHHHHHHHHHHSBCSSSCSSEEHHHHHHHHHHTTCSCSHHHHHHHHHHHCTTCCSEECHHHHHHHHHHHCCCCC
T ss_pred             hhCCHHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcccc
Confidence            4578999999999999999 99999 9999999999999999988999999999999999999999999998764432  


Q ss_pred             ---CcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhcCc
Q 009980          433 ---QGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDS  508 (521)
Q Consensus       433 ---~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~~~  508 (521)
                         .....++.+|+.+|.|++|+|+.+||..++..++..      .+++++..+|+.+|.|+||.|+|+||..+|...+
T Consensus        85 ~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~------~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~  157 (158)
T 2jnf_A           85 NPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDET------LSSEDLDAMIDEIDADGSGTVDFEEFMGVMTGGD  157 (158)
T ss_dssp             CTTTTSSTHHHHHHHHCSSSSSSEEHHHHHHHHHHHCTT------CCHHHHHHHHHHHCSSCCSEECSHHHHHHTSSCC
T ss_pred             chhhHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCCc------CCHHHHHHHHHHhCCCCCCcEeHHHHHHHHhccC
Confidence               445679999999999999999999999999987754      6778999999999999999999999999998754

>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=99.88  E-value=3.2e-22  Score=170.95  Aligned_cols=139  Identities=19%  Similarity=0.413  Sum_probs=127.5

Q ss_pred             CHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhh-ccCCCcHHH
Q 009980          360 NEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSS-LRKSQGDDA  437 (521)
Q Consensus       360 ~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~-~~~~~~~~~  437 (521)
                      +++++.+++.+|..+|.|++| |+.+||..+++.+|..++..++..+|+.+|.|++|.|+|+||+.++.. .......+.
T Consensus         1 ~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~   80 (142)
T 2bl0_C            1 GDDQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFLSMMGRRMKQTTSEDI   80 (142)
T ss_dssp             CCHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHTTCCCHHH
T ss_pred             CHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCcCCCCeeeHHHHHHHHHHHhcCCChHHH
Confidence            457889999999999999999 999999999999999999899999999999999999999999999886 344556788


Q ss_pred             HHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHh
Q 009980          438 LRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQ  505 (521)
Q Consensus       438 l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~  505 (521)
                      ++.+|+.+|.|++|+|+.+||..++..++..      .+++++..+|+.+| |+||.|+|+||..+|.
T Consensus        81 ~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~------~~~~~~~~~~~~~d-~~dg~i~~~eF~~~~~  141 (142)
T 2bl0_C           81 LRQAFRTFDPEGTGYIPKAALQDALLNLGDR------LKPHEFAEFLGITE-TEKGQIRYDNFINTMF  141 (142)
T ss_dssp             HHHHHHHTCCSSCSCEEHHHHHHHHHHSSSC------CCHHHHHHHHHHHC-CSSSEECSHHHHTTTC
T ss_pred             HHHHHHHHCCCCCCcCcHHHHHHHHHHcCCC------CCHHHHHHHHHHhC-CCCCcEeHHHHHHHHc
Confidence            9999999999999999999999999988754      67789999999999 9999999999998764

>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A

Probab=99.88  E-value=5.3e-22  Score=171.67  Aligned_cols=144  Identities=25%  Similarity=0.374  Sum_probs=130.3

Q ss_pred             CCCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCc-
Q 009980          357 HDLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQG-  434 (521)
Q Consensus       357 ~~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~-  434 (521)
                      ..++++++.++..+|..+|.|++| |+.+||..+++.+|...+..++..+|+.+|.|++|.|+|+||+.++........ 
T Consensus         3 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~   82 (153)
T 3ox6_A            3 RSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETA   82 (153)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHCSSSCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSTTCCCHHHHHHHHHHHHTTCCH
T ss_pred             ccCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCccCcHHHHHHHHHHHhhcccc
Confidence            458899999999999999999999 999999999999999999999999999999999999999999999876443332 


Q ss_pred             ----HHHHHHHhHhhccCCCcceeHHHHHHHHHh-CCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          435 ----DDALRLCFQMYDIDRSGCITKEEVASMLRA-LPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       435 ----~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~-~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                          .+.++.+|+.+|.|++|+|+.+||..++.. .+..      .+++++..+|+.+|.|+||.|+|+||..+|++
T Consensus        83 ~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~------~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~k  153 (153)
T 3ox6_A           83 DMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQ------VGHRDIEEIIRDVDLNGDGRVDFEEFVRMMSR  153 (153)
T ss_dssp             HHHCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHSSC------CCHHHHHHHHHHHCSSSSSSBCHHHHHHHTCC
T ss_pred             ccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCC------CCHHHHHHHHHHhCCCCCCeEeHHHHHHHHhC
Confidence                467999999999999999999999999988 6654      67789999999999999999999999998763

>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A

Probab=99.88  E-value=7.1e-22  Score=169.71  Aligned_cols=143  Identities=17%  Similarity=0.390  Sum_probs=130.0

Q ss_pred             CCCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhc-cCCCc
Q 009980          357 HDLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSL-RKSQG  434 (521)
Q Consensus       357 ~~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~-~~~~~  434 (521)
                      ..++++++.+++.+|..+|.|++| |+.+||..+++.++...+..++..+|+.+|.+++|.|+|+||+.++... .....
T Consensus         3 ~~l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~   82 (147)
T 4ds7_A            3 QNLTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALMSRQLKCNDS   82 (147)
T ss_dssp             -CCCHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHHHHHTHHH
T ss_pred             CcCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHhccCCCc
Confidence            458899999999999999999999 9999999999999999999999999999999999999999999998764 33345


Q ss_pred             HHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          435 DDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       435 ~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      .+.+..+|+.+|.|++|.|+.+||..++..++..      .+++++..+|+.+| |+||.|+|+||..+|++
T Consensus        83 ~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~------~~~~~~~~~~~~~d-~~dg~i~~~eF~~~l~k  147 (147)
T 4ds7_A           83 EQELLEAFKVFDKNGDGLISAAELKHVLTSIGEK------LTDAEVDEMLREVS-DGSGEINIKQFAALLSK  147 (147)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCC------CCHHHHHHHHHHHS-SSCSSEEHHHHHHHTTC
T ss_pred             HHHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCC------CCHHHHHHHHHHhc-CCCCcCcHHHHHHHHhC
Confidence            6789999999999999999999999999988754      67889999999999 99999999999998863

>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...

Probab=99.87  E-value=7.3e-22  Score=172.56  Aligned_cols=144  Identities=26%  Similarity=0.432  Sum_probs=129.5

Q ss_pred             CCCCHHHHHHHHHHHHhhhcCC-CC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhcc----
Q 009980          357 HDLNEEEIQNLRIHFRTICANG-DN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLR----  430 (521)
Q Consensus       357 ~~~~~~~~~~l~~~F~~~D~~~-~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~----  430 (521)
                      ..++++++.+++.+|..+|.|+ +| |+.+||..+++.+|...+..++..+|+.+|.|++|.|+++||+.++....    
T Consensus        10 ~~l~~~~~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~   89 (161)
T 1dtl_A           10 EQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDS   89 (161)
T ss_dssp             GGSCHHHHHHHHHHHHHHTTTCGGGSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC---
T ss_pred             hhCCHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhcccc
Confidence            3478899999999999999999 99 99999999999999998899999999999999999999999999987754    


Q ss_pred             CCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          431 KSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       431 ~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      .....+.++.+|+.+|.|++|+|+.+||..++..++..      .+++++..+|+.+|.|+||.|+|+||..+|..
T Consensus        90 ~~~~~~~~~~~F~~~D~d~~G~i~~~El~~~l~~~g~~------~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  159 (161)
T 1dtl_A           90 KGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGET------ITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG  159 (161)
T ss_dssp             --CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC--C------CCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHC
T ss_pred             cchHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCC------CCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHc
Confidence            34566789999999999999999999999999877654      67789999999999999999999999999864

>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...

Probab=99.87  E-value=6e-22  Score=172.20  Aligned_cols=144  Identities=17%  Similarity=0.293  Sum_probs=131.7

Q ss_pred             CCCHHHHHHHHHHHHhhhc--CCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccC--C
Q 009980          358 DLNEEEIQNLRIHFRTICA--NGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRK--S  432 (521)
Q Consensus       358 ~~~~~~~~~l~~~F~~~D~--~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~--~  432 (521)
                      .++++++.+++.+|..+|.  |++| |+.+||..+|+.+|..++..++..+ +.+|.|++|.|+|+||+.++.....  .
T Consensus         2 ~ls~~~~~~l~~~F~~~D~~~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l-~~~D~~~~g~i~~~eF~~~~~~~~~~~~   80 (156)
T 1wdc_C            2 KLSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAV-GGTHKMGEKSLPFEEFLPAYEGLMDCEQ   80 (156)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHTCSSSCEEGGGHHHHHHHTTCCCCHHHHHHT-TCCSSTTSCEECHHHHHHHHHHHTTSCC
T ss_pred             CCCHHHHHHHHHHHHHHccCCCCCCCCcHHHHHHHHHHcCCCCCHHHHHHH-HhhCCCCCCeeeHHHHHHHHHHHhhccC
Confidence            3688999999999999999  9999 9999999999999999888899999 9999999999999999999887543  4


Q ss_pred             CcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHH--hcCCCCcceeHHHHHHHHhcCc
Q 009980          433 QGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDL--MDANNDGKVTFDEFRAAMQRDS  508 (521)
Q Consensus       433 ~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~--~D~~~dG~I~~~Ef~~~~~~~~  508 (521)
                      ...+.++.+|+.+|.|++|+|+.+||..++..++..      .+++++..+|+.  +|.|+||.|+|+||+.+|...+
T Consensus        81 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~------~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~  152 (156)
T 1wdc_C           81 GTFADYMEAFKTFDREGQGFISGAELRHVLTALGER------LSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMAGP  152 (156)
T ss_dssp             CCHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSSSC------CCHHHHHHHHHHHTCCCCTTSEEEHHHHHHHHHHCS
T ss_pred             ChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCC------CCHHHHHHHHHHhCCCCCCCCcEeHHHHHHHHhcCC
Confidence            567889999999999999999999999999988754      677899999999  9999999999999999998754

>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}

Probab=99.87  E-value=2.2e-22  Score=181.28  Aligned_cols=170  Identities=26%  Similarity=0.367  Sum_probs=144.4

Q ss_pred             chHHHHHHHHhHHHHhHHHHHHHHhhhhhHHHHhhHHHHHhhhccCCCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHH
Q 009980          312 MDAEIVSRLQSFNARRKLRAAAIASVLSSTIFLRRTKKLKNLLGSHDLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVL  390 (521)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~l~~l~~~~~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l  390 (521)
                      ....+++++++|.....++.+++..+..                 ...+++++.+++.+|..+|.|++| |+.+||..++
T Consensus         4 ~~~~~~~~l~~~~~~~~~~~~~l~~~~~-----------------~~~~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l   66 (191)
T 3khe_A            4 ALTGALGNMKKFQSSQKLAQAAMLFMGS-----------------KLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGY   66 (191)
T ss_dssp             HHHHHHHHHHHCCCCCHHHHHHHHHHHH-----------------HSSCTTTTHHHHHHHHHHCTTCSSEECHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------HHcCHHHHHHHHHHHHHHcCCCCCCCcHHHHHHHH
Confidence            3456677888887777777776643221                 114778889999999999999999 9999999999


Q ss_pred             Hhc-----------CCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHH
Q 009980          391 KAM-----------NMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVA  459 (521)
Q Consensus       391 ~~~-----------~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~  459 (521)
                      +.+           +...+..++..+|+.+|.|++|.|+++||+.++.........+.+..+|+.+|.|++|+|+.+||.
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~  146 (191)
T 3khe_A           67 RKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELG  146 (191)
T ss_dssp             HHHHC-----CCHHHHHHHHHHHHHHHHHTCTTCSSSEEHHHHHHHHSCHHHHCCHHHHHHHHHHHCTTCSSEECHHHHH
T ss_pred             HHHHhhcccccccccchhhHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhcccchHHHHHHHHHHHCCCCcCcCCHHHHH
Confidence            987           555566789999999999999999999999998776656677889999999999999999999999


Q ss_pred             HHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          460 SMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       460 ~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      .++.  +..      .+++++..+|+.+|.|+||.|+|+||..+|..
T Consensus       147 ~~l~--~~~------~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~  185 (191)
T 3khe_A          147 RLFG--VTE------VDDETWHQVLQECDKNNDGEVDFEEFVEMMQK  185 (191)
T ss_dssp             HHTT--SSC------CCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred             HHHc--cCC------CCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            9987  322      67789999999999999999999999999876

>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A

Probab=99.87  E-value=8.9e-22  Score=175.33  Aligned_cols=143  Identities=23%  Similarity=0.449  Sum_probs=127.8

Q ss_pred             CCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhcc-CCCcH
Q 009980          358 DLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLR-KSQGD  435 (521)
Q Consensus       358 ~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~-~~~~~  435 (521)
                      .++++++.+++.+|..+|.|++| |+.+||..+++.+|..++..++..+|+.+|.|++|.|+|+||+.++.... .....
T Consensus         4 ~l~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~EF~~~~~~~~~~~~~~   83 (179)
T 2f2o_A            4 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSE   83 (179)
T ss_dssp             --CCSHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHccCcccH
Confidence            36788999999999999999999 99999999999999999889999999999999999999999999887642 22345


Q ss_pred             HHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          436 DALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       436 ~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      +.+..+|+.+|.|++|+|+.+||..++..++..      .+++++..+|+.+|.|+||.|+|+||..+|..
T Consensus        84 ~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~g~~------~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~  148 (179)
T 2f2o_A           84 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEK------LTDEEVDEMIREADIDGDGQVNYEEFVQMMTA  148 (179)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHHHC--C------CCHHHHHHHHHHHCTTCSSSEEHHHHHHHSCC
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCC------CCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHH
Confidence            679999999999999999999999999988754      67789999999999999999999999999987

>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}

Probab=99.86  E-value=2.1e-21  Score=173.18  Aligned_cols=167  Identities=19%  Similarity=0.353  Sum_probs=137.7

Q ss_pred             hHHHHHHHHhHHHHhHHHHHHHHhhhhhHHHHhhHHHHHhhhccCCCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHH
Q 009980          313 DAEIVSRLQSFNARRKLRAAAIASVLSSTIFLRRTKKLKNLLGSHDLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLK  391 (521)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~l~~l~~~~~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~  391 (521)
                      ...++.++++|...++++.+.+..+...            +    ..+++++.+++++|..+|.|++| |+.+||..+++
T Consensus         3 ~~~~~~~l~~~~~~~~l~~~~l~~~~~~------------l----~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~   66 (180)
T 3mse_B            3 SPNVLNNMKSYMKHSNIRNIIINIMAHE------------L----SVINNHIKYINELFYKLDTNHNGSLSHREIYTVLA   66 (180)
T ss_dssp             CHHHHHHHHHHTTSCHHHHHHHHHHHHH------------H----HHHHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHhHHHHHHHHHHHHH------------c----cCCHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHH
Confidence            3567788888888888887766533211            0    02477889999999999999999 99999999999


Q ss_pred             hcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCC
Q 009980          392 AMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLP  471 (521)
Q Consensus       392 ~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~  471 (521)
                      .+|..  ..++..+|+.+|.|++|.|+|+||+.++..... ..++.++.+|+.+|.|++|+|+.+||..++..  .    
T Consensus        67 ~~g~~--~~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~~~-~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~--~----  137 (180)
T 3mse_B           67 SVGIK--KWDINRILQALDINDRGNITYTEFMAGCYRWKN-IESTFLKAAFNKIDKDEDGYISKSDIVSLVHD--K----  137 (180)
T ss_dssp             HTTCC--HHHHHHHHHHHCTTCCSEECHHHHHHHHSCCTT-C--CHHHHHHHHHCTTCSSCBCHHHHHHHTTT--S----
T ss_pred             HcCCC--HHHHHHHHHHhCCCCCCcCcHHHHHHHHHhccc-CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHcC--C----
Confidence            99865  478999999999999999999999998876443 33468999999999999999999999999873  2    


Q ss_pred             CCCCChhHHHHHHHHhcCCCC--------cceeHHHHHHHHhc
Q 009980          472 VDITEPGKLDEIFDLMDANND--------GKVTFDEFRAAMQR  506 (521)
Q Consensus       472 ~~~~~~~~~~~~f~~~D~~~d--------G~I~~~Ef~~~~~~  506 (521)
                        ..+++++..+|+.+|.|+|        |.|+|+||+.+|..
T Consensus       138 --~~~~~~~~~~~~~~d~~~d~~~~~~~~G~i~~~eF~~~l~~  178 (180)
T 3mse_B          138 --VLDNNDIDNFFLSVHSIKKGIPREHIINKISFQEFKDYMLS  178 (180)
T ss_dssp             --SCCHHHHHHHHHHHHTC---------CCCBCHHHHHHHHHT
T ss_pred             --CCCHHHHHHHHHHhhhccCcccccccCCeeeHHHHHHHHHh
Confidence              2677899999999999999        99999999999864

>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A

Probab=99.86  E-value=2.8e-22  Score=172.66  Aligned_cols=137  Identities=14%  Similarity=0.274  Sum_probs=122.2

Q ss_pred             HHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHH-cCCCCcceeHHHHHHHHhhc------cCCCcH
Q 009980          364 IQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLF-DNNRDGTVDMREILCGFSSL------RKSQGD  435 (521)
Q Consensus       364 ~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~-D~~~~g~I~~~ef~~~~~~~------~~~~~~  435 (521)
                      +.+++.+|..+|.|++| |+.+||..+|+.+|..++..++..+|+.+ |.|++|.|+|+||+.++...      ......
T Consensus         3 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~   82 (148)
T 1m45_A            3 TRANKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAKT   82 (148)
T ss_dssp             CCCCTTCHHHHCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGCCCT
T ss_pred             HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHhhCCCCCCeEcHHHHHHHHHHHHhhccccccccH
Confidence            34567889999999999 99999999999999999999999999999 99999999999999998776      445567


Q ss_pred             HHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          436 DALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       436 ~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      +.++.+|+.+|.|++|+|+.+||..++..++..      .+++++..+|+.+|.|+||.|+|+||..+|..
T Consensus        83 ~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~------~~~~~~~~~~~~~d~d~dg~i~~~eF~~~~~~  147 (148)
T 1m45_A           83 EDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEK------LTDAEVDELLKGVEVDSNGEIDYKKFIEDVLR  147 (148)
T ss_dssp             HHHHHHHHTTCSSSSSEEEHHHHHHHHHHSTTC------CCHHHHHHHHTTCCCCTTSEEEHHHHHHHHHC
T ss_pred             HHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCC------CCHHHHHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence            889999999999999999999999999988764      67789999999999999999999999999864

>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*

Probab=99.86  E-value=5.5e-21  Score=164.52  Aligned_cols=140  Identities=13%  Similarity=0.269  Sum_probs=128.1

Q ss_pred             CCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHH---cCCCCcceeHHHHHHHHhhc---cC
Q 009980          359 LNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLF---DNNRDGTVDMREILCGFSSL---RK  431 (521)
Q Consensus       359 ~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~---D~~~~g~I~~~ef~~~~~~~---~~  431 (521)
                      ++++++.+++.+|..+|.|++| |+.+||..+++.+|..++.+++..+|+.+   |.++ |.|+|+||+.++...   ..
T Consensus         2 l~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~~~~d~~~-g~i~~~eF~~~~~~~~~~~~   80 (149)
T 2mys_C            2 FSKAAADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNA-AAITFEEFLPMLQAAANNKD   80 (149)
T ss_pred             CCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhhhccccC-CcCcHHHHHHHHHHHhccCC
Confidence            6788999999999999999999 99999999999999999999999999999   9999 999999999998774   23


Q ss_pred             CCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          432 SQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       432 ~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      ......+..+|+.+|.|++|+|+.+||..++..++..      .+++++..+|+. |.|+||.|+|+||..+|..
T Consensus        81 ~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~------~~~~~~~~~~~~-d~~~dg~i~~~eF~~~~~~  148 (149)
T 2mys_C           81 QGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEK------MTEEEVEELMKG-QEDSNGCINYEAFVKHIMS  148 (149)
T ss_pred             cchHHHHHHHHHHhCCCCCceEcHHHHHHHHHHhCCC------CCHHHHHHHHhh-CCCCCCcEeHHHHHHHHhc
Confidence            3456789999999999999999999999999988654      677899999999 9999999999999999874

>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}

Probab=99.86  E-value=1e-21  Score=168.05  Aligned_cols=140  Identities=18%  Similarity=0.371  Sum_probs=126.0

Q ss_pred             CCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhc-cCCCcHH
Q 009980          359 LNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSL-RKSQGDD  436 (521)
Q Consensus       359 ~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~-~~~~~~~  436 (521)
                      ++++++.+++.+|..+|.|++| |+.+||..+++.+|..++..++..++..    ++|.|+|+||+.++... ......+
T Consensus         1 ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~----~~g~i~~~eF~~~~~~~~~~~~~~~   76 (143)
T 3j04_B            1 FDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSE----APGPINFTMFLTMFGEKLNGTDPED   76 (143)
T ss_dssp             CCHHHHHHHHHHHTTTCSSCTTCCCHHHHHHHHHHTSCCCCHHHHHTTTTT----SSSCCCHHHHHHHHHHTTTSSCCHH
T ss_pred             CCHHHHHHHHHHHHHhCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHh----CCCCcCHHHHHHHHHHHhccCCcHH
Confidence            4788999999999999999999 9999999999999998887777777655    89999999999998864 4445678


Q ss_pred             HHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhcCc
Q 009980          437 ALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDS  508 (521)
Q Consensus       437 ~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~~~  508 (521)
                      .+..+|+.+|.|++|+|+.+||..++..++..      .+++++..+|+.+|.|+||.|+|+||..+|..++
T Consensus        77 ~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~------~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~  142 (143)
T 3j04_B           77 VIRNAFACFDEEASGFIHEDHLRELLTTMGDR------FTDEEVDEMYREAPIDKKGNFNYVEFTRILKHGA  142 (143)
T ss_dssp             HHHHHHTTSCSSSCCCCCTTTHHHHHHTSSSC------CCHHHHHHHHHHTTCCSSSCCCSTHHHHHHHSSC
T ss_pred             HHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCC------CCHHHHHHHHHHcCCCCCCcCcHHHHHHHHhccC
Confidence            89999999999999999999999999988754      6788999999999999999999999999998754

>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...

Probab=99.86  E-value=3.4e-21  Score=168.45  Aligned_cols=143  Identities=27%  Similarity=0.472  Sum_probs=129.6

Q ss_pred             CCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCC-C--
Q 009980          358 DLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKS-Q--  433 (521)
Q Consensus       358 ~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~-~--  433 (521)
                      .++++++.+++.+|..+|.|++| |+..||..+++.+|..++.+++..+|+.+|.|++|.|+++||+.++...... .  
T Consensus        13 ~ls~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~   92 (162)
T 1top_A           13 FLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKG   92 (162)
T ss_dssp             HSCHHHHHHHHHHHHTTTCSCSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHHHHH
T ss_pred             hcCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCcEeHHHHHHHHHHHhcccccc
Confidence            37899999999999999999999 9999999999999999889999999999999999999999999988754321 1  


Q ss_pred             -cHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          434 -GDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       434 -~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                       ..+.++.+|+.+|.|++|+|+.+||..++..++..      .+++++..+|+.+|.|+||.|+|+||..+|..
T Consensus        93 ~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g~~------~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  160 (162)
T 1top_A           93 KSEEELANCFRIFDKNADGFIDIEELGEILRATGEH------VTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG  160 (162)
T ss_dssp             HHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTTTCC------CCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHS
T ss_pred             ccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCC------CCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhh
Confidence             45678999999999999999999999999987754      67789999999999999999999999999875

>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}

Probab=99.86  E-value=1.7e-21  Score=171.13  Aligned_cols=141  Identities=29%  Similarity=0.449  Sum_probs=121.5

Q ss_pred             CCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHH
Q 009980          359 LNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDA  437 (521)
Q Consensus       359 ~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~  437 (521)
                      ++++++.+++.+|..+|.|++| |+.+||..+++.++...+.+++..+|+.+|.|++|.|+++||+.++.........+.
T Consensus        21 l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~  100 (166)
T 2aao_A           21 LSEEEIAGLKEMFNMIDADKSGQITFEELKAGLKRVGANLKESEILDLMQAADVDNSGTIDYKEFIAATLHLNKIEREDH  100 (166)
T ss_dssp             SCHHHHHHHHHHHHHHCTTCCSSBCHHHHHHHGGGGTCCCCHHHHHHHHHHHCTTCCSSBCHHHHHHHHTTCHHHHTTHH
T ss_pred             CCHHHHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhhcccHHH
Confidence            7888999999999999999999 999999999999999888889999999999999999999999998876543344578


Q ss_pred             HHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhcC
Q 009980          438 LRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRD  507 (521)
Q Consensus       438 l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~~  507 (521)
                      +..+|+.+|.|++|+|+.+||..++..++        .+++++..+|+.+|.|+||.|+|+||..++...
T Consensus       101 ~~~~F~~~D~d~~G~i~~~e~~~~l~~~~--------~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~  162 (166)
T 2aao_A          101 LFAAFTYFDKDGSGYITPDELQQACEEFG--------VEDVRIEELMRDVDQDNDGRIDYNEFVAMMQKG  162 (166)
T ss_dssp             HHHHHHHHCTTCSSSBCHHHHHHHTCC----------------CCHHHHHCTTCSSSBCHHHHHHHHC--
T ss_pred             HHHHHHHhCCCCCCcCcHHHHHHHHHHcC--------CCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhc
Confidence            99999999999999999999999987653        234578899999999999999999999998763

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5

Probab=99.86  E-value=9.9e-21  Score=167.87  Aligned_cols=139  Identities=20%  Similarity=0.288  Sum_probs=125.2

Q ss_pred             CHHHHHHHHHHHHhhhcCCCC-CCHHHHHH----HHHhcCCCCCcchHH-----------HHHHHHcCCCCcceeHHHHH
Q 009980          360 NEEEIQNLRIHFRTICANGDN-ATLSEFEE----VLKAMNMSSLVPLAP-----------RIFDLFDNNRDGTVDMREIL  423 (521)
Q Consensus       360 ~~~~~~~l~~~F~~~D~~~~g-i~~~el~~----~l~~~~~~~~~~~~~-----------~~f~~~D~~~~g~I~~~ef~  423 (521)
                      +++++.+++.+|..+|.|++| |+.+||..    +++.+|..++.+++.           .+|+.+|.|++|.|+++||+
T Consensus         2 s~~~~~~l~~~F~~~D~d~~G~i~~~el~~~~~~~l~~~g~~~~~~~~~~l~~~~~~~~~~lf~~~D~d~dg~i~~~Ef~   81 (176)
T 1nya_A            2 TAIASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFI   81 (176)
T ss_dssp             CSHHHHHHHHHHHHCCSSCCSSBCSHHHHHHHHHHHHHTSSCSSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHHHHH
T ss_pred             cHHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHH
Confidence            678899999999999999999 99999999    688889998888776           89999999999999999999


Q ss_pred             HHHhhccCCCc--------HHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcce
Q 009980          424 CGFSSLRKSQG--------DDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKV  495 (521)
Q Consensus       424 ~~~~~~~~~~~--------~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I  495 (521)
                      .++........        ...++.+|+.+|.|++|+|+.+||..++..++        .+++++..+|+.+|.|+||.|
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g--------~~~~~~~~~~~~~D~d~dg~i  153 (176)
T 1nya_A           82 RVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALG--------MSKAEAAEAFNQVDTNGNGEL  153 (176)
T ss_dssp             HHHHHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTT--------CCHHHHHHHHHHHCTTCSSEE
T ss_pred             HHHHHHhcCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHhC--------CCHHHHHHHHHHhCCCCCCCC
Confidence            99887654443        36699999999999999999999999999875        456789999999999999999


Q ss_pred             eHHHHHHHHhc
Q 009980          496 TFDEFRAAMQR  506 (521)
Q Consensus       496 ~~~Ef~~~~~~  506 (521)
                      +|+||..++..
T Consensus       154 ~~~ef~~~~~~  164 (176)
T 1nya_A          154 SLDELLTAVRD  164 (176)
T ss_dssp             EHHHHHHHHSC
T ss_pred             cHHHHHHHHHH
Confidence            99999999986

>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}

Probab=99.85  E-value=2.2e-21  Score=176.61  Aligned_cols=161  Identities=21%  Similarity=0.299  Sum_probs=129.4

Q ss_pred             CHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHH
Q 009980          360 NEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDAL  438 (521)
Q Consensus       360 ~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l  438 (521)
                      ...++.+++++|+.+|.|++| |+.+||..+++.+|...+.+++..+|+.+|.|++|.|+|+||+.++.........+.+
T Consensus        32 ~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~~~~~~~~~~  111 (204)
T 3e3r_A           32 GASGIQGLARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAVI  111 (204)
T ss_dssp             --------CHHHHHHCTTCCSSBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHTSCCCCHHHHHHH
T ss_pred             CchhHHHHHHHHHHHccCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHhhcCchHHHHH
Confidence            356778899999999999999 9999999999999999999999999999999999999999999998775554566789


Q ss_pred             HHHhHhhccCCCcceeHHHHHHHHHhCCCCC-CCCCCCChhHHHHHHHHhcC-CCCcceeHHHHHHHHhc-C-ccHHHHH
Q 009980          439 RLCFQMYDIDRSGCITKEEVASMLRALPDDC-LPVDITEPGKLDEIFDLMDA-NNDGKVTFDEFRAAMQR-D-SSLQDVV  514 (521)
Q Consensus       439 ~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~-~~~~~~~~~~~~~~f~~~D~-~~dG~I~~~Ef~~~~~~-~-~~~~~~~  514 (521)
                      +.+|+.+|.|++|+|+.+||..++...+... ......+++++..+|+.+|. |+||.|+|+||..++.. . ...++++
T Consensus       112 ~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~dg~Is~~EF~~~~~~~~~~~~~d~~  191 (204)
T 3e3r_A          112 AAAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDEVLRRFLDNFDSSEKDGQVTLAEFQDYYSGVSASMNTDEE  191 (204)
T ss_dssp             HHHHHHHCTTCSSEECHHHHHHHCCCTTCHHHHTTSSCHHHHHHHHHHHHSCSSCCSCEEHHHHHHHHHHHHHHCSSHHH
T ss_pred             HHHHHHhCcCCCCeEeHHHHHHHHccccCCccccCCCChHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHcCccCCChHH
Confidence            9999999999999999999999987542110 00112556789999999998 99999999999999988 3 2235667


Q ss_pred             HHhhhh
Q 009980          515 LSSLRQ  520 (521)
Q Consensus       515 ~~~~~~  520 (521)
                      .+.+++
T Consensus       192 f~~~~~  197 (204)
T 3e3r_A          192 FVAMMT  197 (204)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            776654

>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}

Probab=99.85  E-value=4.7e-21  Score=174.28  Aligned_cols=146  Identities=23%  Similarity=0.446  Sum_probs=127.9

Q ss_pred             HhhhccCCCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhc
Q 009980          351 KNLLGSHDLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSL  429 (521)
Q Consensus       351 ~~l~~~~~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~  429 (521)
                      ..+.....++++++.+++.+|..+|.|++| |+.+||..+ ..+|..++   +..+|+.+|.|++|.|+|+||+.++...
T Consensus        15 ~~~~~~~~ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~-~~lg~~~~---~~~l~~~~D~d~dg~i~~~EF~~~~~~~   90 (202)
T 2bec_A           15 DSIRRETGFSQASLLRLHHRFRALDRNKKGYLSRMDLQQI-GALAVNPL---GDRIIESFFPDGSQRVDFPGFVRVLAHF   90 (202)
T ss_dssp             TTHHHHHCCCHHHHHHHHHHHHHHCSSCSSCCCHHHHHTC-HHHHHSTT---HHHHHHTTSCSSCCCCCHHHHHHHHGGG
T ss_pred             HHHHHccCCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHH-HhcCCCcc---HHHHHHHhCCCCCCcCcHHHHHHHHHHh
Confidence            334445568999999999999999999999 999999999 77776554   8999999999999999999999998875


Q ss_pred             c-----------------CCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhC-CCCCCCCCCCChhHHHHHHHH----h
Q 009980          430 R-----------------KSQGDDALRLCFQMYDIDRSGCITKEEVASMLRAL-PDDCLPVDITEPGKLDEIFDL----M  487 (521)
Q Consensus       430 ~-----------------~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~-~~~~~~~~~~~~~~~~~~f~~----~  487 (521)
                      .                 .....+.++.+|+.+|.|++|+|+.+||..++..+ +..      .+++++..+|+.    +
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~------~~~~~~~~~~~~~~~~~  164 (202)
T 2bec_A           91 RPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGVQ------VTEEQLENIADRTVQEA  164 (202)
T ss_dssp             SCCCHHHHC-----CCCCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHSCCSC------CCHHHHHHHHHHHHHHH
T ss_pred             cccchhcccccccccccccccHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhcCCC------CCHHHHHHHHHHHHHHc
Confidence            4                 34456789999999999999999999999999987 654      567788888888    9


Q ss_pred             cCCCCcceeHHHHHHHHhc
Q 009980          488 DANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       488 D~~~dG~I~~~Ef~~~~~~  506 (521)
                      |.|+||.|+|+||..+|..
T Consensus       165 D~d~dG~Is~~EF~~~~~~  183 (202)
T 2bec_A          165 DEDGDGAVSFVEFTKSLEK  183 (202)
T ss_dssp             CSSCSSSEEHHHHHHTTTT
T ss_pred             CCCCCCcCcHHHHHHHHHH
Confidence            9999999999999999876

>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A

Probab=99.85  E-value=6.4e-21  Score=175.52  Aligned_cols=138  Identities=13%  Similarity=0.130  Sum_probs=126.3

Q ss_pred             CCCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcH
Q 009980          357 HDLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGD  435 (521)
Q Consensus       357 ~~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~  435 (521)
                      ..++++++.+++++|..+|.|++| |+.+||..+++.+|...+..++..+|+.+|.|++|.|+|+||+.++...      
T Consensus        43 ~~l~~~e~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~I~~~EF~~~~~~~------  116 (220)
T 3sjs_A           43 NTIPLDQYTRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYEFMAMYKFM------  116 (220)
T ss_dssp             GGCCHHHHHHHHHHHHHHCTTCCSSBCHHHHHHCCBGGGBCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHH------
T ss_pred             hcCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH------
Confidence            348999999999999999999999 9999999999999999988999999999999999999999999988764      


Q ss_pred             HHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhcC
Q 009980          436 DALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRD  507 (521)
Q Consensus       436 ~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~~  507 (521)
                      +.++.+|+.+|.|++|+|+.+||..++..++..      .++++++.+|+.+| |+||.|+|+||.++|...
T Consensus       117 ~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~------~~~~~~~~l~~~~d-d~dg~I~~~eF~~~~~~l  181 (220)
T 3sjs_A          117 ELAYNLFVMNARARSGTLEPHEILPALQQLGFY------INQRTSLLLHRLFA-RGMAFCDLNCWIAICAFA  181 (220)
T ss_dssp             HHHHHHHHHHCCSSTTEECHHHHHHHHHHHTCC------CCHHHHHHHHHHHC---CCSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCCCcHHHHHHHHHHhCCC------CCHHHHHHHHHHhc-CCCCcCcHHHHHHHHHHH
Confidence            679999999999999999999999999988765      67789999999999 999999999999998763

>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E

Probab=99.85  E-value=1.7e-20  Score=167.68  Aligned_cols=162  Identities=27%  Similarity=0.453  Sum_probs=132.6

Q ss_pred             HHHhhhccCCCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCC-CCcchHHHHHHHHcCCCCcceeHHHHHHHH
Q 009980          349 KLKNLLGSHDLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMS-SLVPLAPRIFDLFDNNRDGTVDMREILCGF  426 (521)
Q Consensus       349 ~l~~l~~~~~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~-~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~  426 (521)
                      .+.++.....++++++.++...|..+  |++| |+.+||..+++.++.. .+..++..+|+.+|.|++|.|+++||+.++
T Consensus         5 el~~l~~~~~~s~~~i~~l~~~fd~~--d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~   82 (183)
T 1s6c_A            5 GLEQLEAQTNFTKRELQVLYRGFKNE--XPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTAL   82 (183)
T ss_dssp             -CHHHHHHSSCCHHHHHHHHHHHHHH--CTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHHH
T ss_pred             HHHHHHHhcCCCHHHHHHHHHHHHHh--CCCCcCCHHHHHHHHHHHcCCCChHHHHHHHHHHhCCCCCCcEeHHHHHHHH
Confidence            34445555678899888887777765  6788 9999999999998765 567789999999999999999999999999


Q ss_pred             hhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhC----CCCCCC--CCCCChhHHHHHHHHhcCCCCcceeHHHH
Q 009980          427 SSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRAL----PDDCLP--VDITEPGKLDEIFDLMDANNDGKVTFDEF  500 (521)
Q Consensus       427 ~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~----~~~~~~--~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef  500 (521)
                      .........+.++.+|+.+|.|++|+|+.+||..++..+    |....+  .....++++..+|+.+|.|+||.|+++||
T Consensus        83 ~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~i~~~Ef  162 (183)
T 1s6c_A           83 SILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEF  162 (183)
T ss_dssp             HHHHHCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHTC-----------CHHHHHHHHHHHCTTCSSEECHHHH
T ss_pred             HHHcCCCHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHHHhccccCcCccHHHHHHHHHHHHHHhCCCCCCcEeHHHH
Confidence            887777788899999999999999999999999999775    421100  01123478999999999999999999999


Q ss_pred             HHHHhcCccHHH
Q 009980          501 RAAMQRDSSLQD  512 (521)
Q Consensus       501 ~~~~~~~~~~~~  512 (521)
                      ..++...+.+.+
T Consensus       163 ~~~~~~~~~~~~  174 (183)
T 1s6c_A          163 LESXQEDDNIMR  174 (183)
T ss_dssp             HHHTTSCCHHHH
T ss_pred             HHHHhcChHHHH
Confidence            999999887653

>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C

Probab=99.85  E-value=6.6e-22  Score=170.91  Aligned_cols=142  Identities=13%  Similarity=0.305  Sum_probs=119.5

Q ss_pred             CCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCC--CCcceeHHHHHHHHhhccCC--
Q 009980          358 DLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNN--RDGTVDMREILCGFSSLRKS--  432 (521)
Q Consensus       358 ~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~--~~g~I~~~ef~~~~~~~~~~--  432 (521)
                      .++++++.+++.+|..+|.|++| |+.+||..+++.+|..++..++..+|+.+|.|  ++|.|+|+||+.++......  
T Consensus         3 ~ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~~~g~i~~~eF~~~~~~~~~~~~   82 (151)
T 1w7j_B            3 EFNKDQLEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRG   82 (151)
T ss_dssp             --------CHHHHHHHHCCSSSSEEESTTHHHHHHHTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC---
T ss_pred             CCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCcCCCCcCcHHHHHHHHHHHhccCC
Confidence            36788899999999999999999 99999999999999999999999999999999  99999999999998775422  


Q ss_pred             -CcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          433 -QGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       433 -~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                       ...+.+..+|+.+|.|++|+|+.+||..++..++..      .+++++..+|+.+| |+||.|+|+||..+|..
T Consensus        83 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~------~~~~~~~~~~~~~d-~~dg~i~~~eF~~~~~~  150 (151)
T 1w7j_B           83 QGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEK------MTEEEVETVLAGHE-DSNGCINYEAFLKHILS  150 (151)
T ss_dssp             -----CCHHHHHTTCTTSSSEEEHHHHHHHHHHSSSC------CCHHHHHHHHTTCC-CTTSEEEHHHHHHHTC-
T ss_pred             CCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCC------CCHHHHHHHHHhcc-CCCCeEeHHHHHHHHhc
Confidence             234568889999999999999999999999988754      67789999999999 99999999999998864

>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5

Probab=99.85  E-value=7.8e-22  Score=177.15  Aligned_cols=141  Identities=27%  Similarity=0.465  Sum_probs=127.5

Q ss_pred             CCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHH
Q 009980          358 DLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDD  436 (521)
Q Consensus       358 ~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~  436 (521)
                      .++++++.+++.+|..+|.|++| |+.+||..+|+.++...+..++..+|+.+|.|++|.|+|+||+.++..+......+
T Consensus         3 ~ls~~~~~~l~~~F~~~D~d~dG~I~~~E~~~~l~~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~~   82 (188)
T 1s6i_A            3 RLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLEREE   82 (188)
T ss_dssp             SSSCTTTCSHHHHHHTTSSSSSSCEEHHHHHHHHTTTTCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCCCC
T ss_pred             CCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHhccCHHH
Confidence            46778888999999999999999 99999999999999888889999999999999999999999999987765545556


Q ss_pred             HHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          437 ALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       437 ~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      .++.+|+.+|.|++|+|+.+||..++..++        .+++++..+|+.+|.|+||.|+|+||..+|..
T Consensus        83 ~l~~~F~~~D~d~dG~Is~~El~~~l~~~g--------~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~  144 (188)
T 1s6i_A           83 NLVSAFSYFDKDGSGYITLDEIQQACKDFG--------LDDIHIDDMIKEIDQDNDGQIDYGEFAAMMRK  144 (188)
T ss_dssp             STHHHHHHTTTTCSSEEEHHHHHHTTTTTT--------CCTTHHHHHHHHHCSSSSSEEETTHHHHTTSC
T ss_pred             HHHHHHHHHCCCCCCcCcHHHHHHHHHHcC--------CCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHH
Confidence            799999999999999999999999987654        34568999999999999999999999999976

>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}

Probab=99.84  E-value=2e-20  Score=168.37  Aligned_cols=143  Identities=19%  Similarity=0.203  Sum_probs=126.7

Q ss_pred             cCCCCHHHHHHHHHHHHhh-hcCCCC-CCHHHHHHHHHhc----CCCCCcchHHHHH-----------HHHcCCCCccee
Q 009980          356 SHDLNEEEIQNLRIHFRTI-CANGDN-ATLSEFEEVLKAM----NMSSLVPLAPRIF-----------DLFDNNRDGTVD  418 (521)
Q Consensus       356 ~~~~~~~~~~~l~~~F~~~-D~~~~g-i~~~el~~~l~~~----~~~~~~~~~~~~f-----------~~~D~~~~g~I~  418 (521)
                      ...+++.++.+++.+|..+ |.|++| |+.+||..+++.+    |...+.+.+..++           +.+|.|++|.|+
T Consensus         3 ~~~ls~~~~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~D~d~dG~i~   82 (191)
T 2ccm_A            3 AHQLSDFQRNKILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARATLKLIWDGLRKYADENEDEQVT   82 (191)
T ss_dssp             CCCCCHHHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTCSSCEE
T ss_pred             hhhccHHHHHHHHHhccccccCCCCCeeeHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCeEC
Confidence            3457889999999999999 999999 9999999999998    8888888888888           999999999999


Q ss_pred             HHHHHHHHhhccC---------CCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcC
Q 009980          419 MREILCGFSSLRK---------SQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDA  489 (521)
Q Consensus       419 ~~ef~~~~~~~~~---------~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~  489 (521)
                      ++||+.++.....         ......++.+|+.+|.|++|+|+.+||..++..++        .+++++..+|+.+|.
T Consensus        83 ~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~E~~~~l~~~g--------~~~~~~~~~~~~~D~  154 (191)
T 2ccm_A           83 KEEWLKMWAECVKSVEKGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYSTVYMSYG--------IPKSDCDAAFDTLSD  154 (191)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHCTTCSSBCCHHHHHHHHHTTT--------CCHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHhccccchhhchHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhC--------CCHHHHHHHHHHhCC
Confidence            9999998876421         22346789999999999999999999999998764        456789999999999


Q ss_pred             CCCcceeHHHHHHHHhc
Q 009980          490 NNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       490 ~~dG~I~~~Ef~~~~~~  506 (521)
                      |+||.|+++||..++..
T Consensus       155 d~dG~i~~~Ef~~~~~~  171 (191)
T 2ccm_A          155 GGKTMVTREIFARLWTE  171 (191)
T ss_dssp             TTTSCCBHHHHHHHHHH
T ss_pred             CCCCCcCHHHHHHHHHH
Confidence            99999999999999875

>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=99.84  E-value=7.1e-21  Score=163.07  Aligned_cols=138  Identities=13%  Similarity=0.266  Sum_probs=123.3

Q ss_pred             CCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhc--cCCCcH
Q 009980          359 LNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSL--RKSQGD  435 (521)
Q Consensus       359 ~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~--~~~~~~  435 (521)
                      +++++   ++.+|..+|.|++| |+.+||..+++.+|..++..++..+|..   |++|.|+|+||+.++...  ......
T Consensus         2 ls~~e---l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~---~~~g~i~~~eF~~~~~~~~~~~~~~~   75 (145)
T 2bl0_B            2 ASADQ---IQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQ---LNAKEFDLATFKTVYRKPIKTPTEQS   75 (145)
T ss_dssp             CCHHH---HHHHHHHHCTTCSSCEEGGGHHHHHHHTTCCCCHHHHHHHHHH---HTSSEECHHHHHHHHTSCCCCGGGGH
T ss_pred             CCHHH---HHHHHHHhCCCCcCccCHHHHHHHHHHhCCCCCHHHHHHHHHh---cCCCeEcHHHHHHHHHHHhhcCcccH
Confidence            45555   89999999999999 9999999999999999888899999987   889999999999998775  334456


Q ss_pred             HHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhcCc
Q 009980          436 DALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDS  508 (521)
Q Consensus       436 ~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~~~  508 (521)
                      ..++.+|+.+|.|++|+|+.+||..++..++..      .+++++..+|+.+|.|+||.|+|+||..++..+.
T Consensus        76 ~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~------~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~  142 (145)
T 2bl0_B           76 KEMLDAFRALDKEGNGTIQEAELRQLLLNLGDA------LTSSEVEELMKEVSVSGDGAINYESFVDMLVTGY  142 (145)
T ss_dssp             HHHHHHHHHHCSSSSSEEEHHHHHHHHHHSSSC------CCHHHHHHHHTTCCCCTTSEEEHHHHHHHHHHSS
T ss_pred             HHHHHHHHHhCCCCCCeEcHHHHHHHHHHcCCC------CCHHHHHHHHHHcCCCCCCcEeHHHHHHHHHhcC
Confidence            789999999999999999999999999988754      6778999999999999999999999999998743

>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B

Probab=99.84  E-value=2.9e-20  Score=163.29  Aligned_cols=140  Identities=17%  Similarity=0.295  Sum_probs=126.0

Q ss_pred             CCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCC-CCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhc-cCCCc
Q 009980          358 DLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNM-SSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSL-RKSQG  434 (521)
Q Consensus       358 ~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~-~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~-~~~~~  434 (521)
                      .++++++.+++.+|..+|.|++| |+.+||..+++.+|. .++..++..+|...    +|.|+|+||+.++... .....
T Consensus        18 ~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~l~~~~----dg~i~~~eF~~~~~~~~~~~~~   93 (166)
T 2mys_B           18 MFDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEA----SGPINFTVFLTMFGEKLKGADP   93 (166)
T ss_pred             hCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHC----CCCcCHHHHHHHHHHHhccCCc
Confidence            47888999999999999999999 999999999999998 88888888888763    7999999999998764 33446


Q ss_pred             HHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhcC
Q 009980          435 DDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRD  507 (521)
Q Consensus       435 ~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~~  507 (521)
                      .+.++.+|+.+|.|++|+|+.+||..++..++..      .+++++..+|+.+|.|+||.|+|+||..+|...
T Consensus        94 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~------~~~~~~~~~~~~~D~d~dg~I~~~eF~~~~~~~  160 (166)
T 2mys_B           94 EDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGR------FTPEEIKNMWAAFPPDVAGNVDYKNICYVITHG  160 (166)
T ss_pred             HHHHHHHHHHhCCCCCcceeHHHHHHHHHHcCCC------CCHHHHHHHHHhcCCCCCCeEeHHHHHHHHHhc
Confidence            7889999999999999999999999999987654      677899999999999999999999999999873

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.84  E-value=3.5e-21  Score=181.93  Aligned_cols=160  Identities=16%  Similarity=0.139  Sum_probs=108.0

Q ss_pred             ceeecccccccCceEEEEeEEccCCCcce--EEEEEeecCCCCCCCCCCCCCCCCCCCcccccccc--ccccccHHHHHH
Q 009980           11 EYEVTDILGRGGFSVVRRGIKKTCGETNQ--VAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTR--KQVSVSDALLTN   86 (521)
Q Consensus        11 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~--vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~   86 (521)
                      -|++.+.||+|+||.||+|.+..  +++.  ||||+++.........    .......  ..+...  .........+.+
T Consensus        48 ~~~i~~~ig~G~~g~Vy~a~~~~--~g~~~~vAvK~~~~~~~~~~~~----~~~~~~~--~~~~~~~~~~~~~~~~~~~~  119 (258)
T 1zth_A           48 ITAMGGVISTGKEANVFYADGVF--DGKPVAMAVKIYRIETSEFDKM----DEYLYGD--ERFDMRRISPKEKVFIWTEK  119 (258)
T ss_dssp             EEEEEEEEEECSSEEEEEEEEEE--TTEEEEEEEEEECCC-----------GGGTTTC--TTSCC----CHHHHHHHHHH
T ss_pred             chhhCCEEeecceEEEEEEEEcC--CCcEeeEEEEEEECCccchhhH----HHhhccc--chhhhhccChHHHHHHHHHH
Confidence            37889999999999999999865  6778  9999986432110000    0000000  000000  000122345788


Q ss_pred             HHHHHHHHhhccCCCCCc--cceeEEEEeCCeEEEEEeccCC-C----chHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 009980           87 EILVMRKIVENVSPHPNV--IDLYDVYEDQNGVHLILELCSG-G----ELFDRIVAQERYMEVGAAAVIRQIAEGLAALH  159 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpni--v~~~~~~~~~~~~~lv~e~~~g-g----~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH  159 (521)
                      |+.++.++     .|++|  +.+++.    +..+|||||+.+ |    +|.+....   .++..+..++.|++.||.|||
T Consensus       120 E~~~l~~l-----~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~---~~~~~~~~i~~qi~~~l~~lH  187 (258)
T 1zth_A          120 EFRNLERA-----KEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE---LKELDVEGIFNDVVENVKRLY  187 (258)
T ss_dssp             HHHHHHHH-----HHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG---GGGSCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHH-----HhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc---cChHHHHHHHHHHHHHHHHHH
Confidence            99999999     56643  344432    356899999942 3    66655432   345678899999999999999


Q ss_pred             -HCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccC
Q 009980          160 -QANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVE  195 (521)
Q Consensus       160 -~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~  195 (521)
                       +.||+||||||+|||+   +.  .++|+|||+|...
T Consensus       188 ~~~givHrDlkp~NILl---~~--~~~liDFG~a~~~  219 (258)
T 1zth_A          188 QEAELVHADLSEYNIMY---ID--KVYFIDMGQAVTL  219 (258)
T ss_dssp             HTSCEECSSCSTTSEEE---SS--SEEECCCTTCEET
T ss_pred             HHCCEEeCCCCHHHEEE---cC--cEEEEECcccccC
Confidence             9999999999999999   44  8999999999754

>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...

Probab=99.84  E-value=3.4e-20  Score=161.10  Aligned_cols=141  Identities=16%  Similarity=0.310  Sum_probs=125.2

Q ss_pred             CCCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhc-cCCCc
Q 009980          357 HDLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSL-RKSQG  434 (521)
Q Consensus       357 ~~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~-~~~~~  434 (521)
                      ..++++++.+++.+|..+|.|++| |+.+||..+|+.+|..++..++..++.    +++|.|+|+||+.++... .....
T Consensus        10 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~----~~~g~i~~~eF~~~~~~~~~~~~~   85 (156)
T 1wdc_B           10 TKLPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPLNFTMFLSIFSDKLSGTDS   85 (156)
T ss_dssp             --CCHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHHHHSSCCCHHHHHHHHT----TSSSCCCHHHHHHHHHHHTCSCCC
T ss_pred             ccCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHH----hCCCcCcHHHHHHHHHHHhcCCCh
Confidence            347889999999999999999999 999999999999999888888888774    579999999999998764 34456


Q ss_pred             HHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhcCc
Q 009980          435 DDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDS  508 (521)
Q Consensus       435 ~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~~~  508 (521)
                      .+.++.+|+.+|.|++|+|+.+||..++..++..      .+++++..+|+.+|.| ||.|+|+||..+|....
T Consensus        86 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~------~~~~~~~~~~~~~d~~-dg~i~~~eF~~~~~~~~  152 (156)
T 1wdc_B           86 EETIRNAFAMFDEQETKKLNIEYIKDLLENMGDN------FNKDEMRMTFKEAPVE-GGKFDYVKFTAMIKGSG  152 (156)
T ss_dssp             HHHHHHHHHTTCTTCCSCEEHHHHHHHHHHSSSC------CCHHHHHHHHHHCCEE-TTEECHHHHHHHHHTSC
T ss_pred             HHHHHHHHHHHCcCCCCccCHHHHHHHHHHhCCC------CCHHHHHHHHHhcCCC-CCEEeHHHHHHHHhcCc
Confidence            7889999999999999999999999999988754      6788999999999999 99999999999998743

>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5

Probab=99.84  E-value=3.4e-20  Score=168.87  Aligned_cols=152  Identities=23%  Similarity=0.451  Sum_probs=129.8

Q ss_pred             HHHHHHHHHHHHhhhcC-CCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHH
Q 009980          361 EEEIQNLRIHFRTICAN-GDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDAL  438 (521)
Q Consensus       361 ~~~~~~l~~~F~~~D~~-~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l  438 (521)
                      .-...+++.+|..+|.+ ++| |+.+||..+++.++...+.+.+..+|+.+|.|++|.|+++||+.++.........+.+
T Consensus        18 ~~~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~~~~~   97 (204)
T 1jba_A           18 AADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKL   97 (204)
T ss_dssp             HHHHHHHHHHHHHHHSSSTTCCEEHHHHHHHHHCCSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCCTHHH
T ss_pred             CCCHHHHHHHHHHHHhhCCCCCcCHHHHHHHHHHhcCCCcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHHccCCHHHHH
Confidence            34556678889999999 899 9999999999999987777899999999999999999999999999887777788899


Q ss_pred             HHHhHhhccCCCcceeHHHHHHHHHhC----CCCCC-------CCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhcC
Q 009980          439 RLCFQMYDIDRSGCITKEEVASMLRAL----PDDCL-------PVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRD  507 (521)
Q Consensus       439 ~~~f~~~D~d~~G~I~~~e~~~~l~~~----~~~~~-------~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~~  507 (521)
                      +.+|+.+|.|++|+|+.+||..++..+    +....       ......++++..+|+.+|.|+||.|+++||..++...
T Consensus        98 ~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~~~  177 (204)
T 1jba_A           98 KWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGARRD  177 (204)
T ss_dssp             HHHHHHHCSSCSSCBCHHHHHHHHHHHHHHHHHSSCCTTSSTTTCCCCHHHHHHHHHHHHCCSCCSCBCHHHHHHHHTTT
T ss_pred             HHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCccccccccCchhhHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHcC
Confidence            999999999999999999999999765    21000       0111345689999999999999999999999999988


Q ss_pred             ccHHH
Q 009980          508 SSLQD  512 (521)
Q Consensus       508 ~~~~~  512 (521)
                      +.+..
T Consensus       178 ~~~~~  182 (204)
T 1jba_A          178 KWVMK  182 (204)
T ss_dssp             TTHHH
T ss_pred             hHHHH
Confidence            77654

>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A

Probab=99.84  E-value=1.2e-20  Score=169.67  Aligned_cols=144  Identities=18%  Similarity=0.207  Sum_probs=124.4

Q ss_pred             CCCCHHHHHHHHHHHHhhhcCCCC-CCHHHHH-----HHHHhcCCCCCcc-----hHHHHHHHHcCCCCcceeHHHHHHH
Q 009980          357 HDLNEEEIQNLRIHFRTICANGDN-ATLSEFE-----EVLKAMNMSSLVP-----LAPRIFDLFDNNRDGTVDMREILCG  425 (521)
Q Consensus       357 ~~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~-----~~l~~~~~~~~~~-----~~~~~f~~~D~~~~g~I~~~ef~~~  425 (521)
                      ...+++++.+++.+|..+|.|++| |+.+||.     .+++.+|..++..     .+..+|+.+|.|++|.|+|+||+.+
T Consensus         8 ~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~   87 (191)
T 1uhk_A            8 DFDNPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEG   87 (191)
T ss_dssp             CTTCHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHH
T ss_pred             ccCCHHHHHHHHHHHhhccCCCCCcCcHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHhCcCCCCcCcHHHHHHH
Confidence            345788999999999999999999 9999999     8899898887766     6889999999999999999999998


Q ss_pred             HhhccC-------CCcHHHHH----HHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcc
Q 009980          426 FSSLRK-------SQGDDALR----LCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGK  494 (521)
Q Consensus       426 ~~~~~~-------~~~~~~l~----~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~  494 (521)
                      +.....       ....+.++    .+|+.+|.|++|+|+.+||..++..++..      .+++++..+|+.+|.|+||.
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~------~~~~~~~~~~~~~D~d~dG~  161 (191)
T 1uhk_A           88 WKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGII------QSSEDCEETFRVCDIDESGQ  161 (191)
T ss_dssp             HHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTSC------CSHHHHHHHHHHSCCCTTSC
T ss_pred             HHHHhcchhhhhhhhhHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhCCC------CCHHHHHHHHHHhCCCCCCc
Confidence            765321       11112343    89999999999999999999999987654      67789999999999999999


Q ss_pred             eeHHHHHHHHhc
Q 009980          495 VTFDEFRAAMQR  506 (521)
Q Consensus       495 I~~~Ef~~~~~~  506 (521)
                      |+|+||..++..
T Consensus       162 i~~~eF~~~~~~  173 (191)
T 1uhk_A          162 LDVDEMTRQHLG  173 (191)
T ss_dssp             EEHHHHHHHHHH
T ss_pred             CcHHHHHHHHHH
Confidence            999999999875

>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A

Probab=99.84  E-value=5.4e-20  Score=170.31  Aligned_cols=154  Identities=27%  Similarity=0.442  Sum_probs=128.3

Q ss_pred             HHhhhccCCCCHHHHHHHHHHHHhhhcC--CCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHH
Q 009980          350 LKNLLGSHDLNEEEIQNLRIHFRTICAN--GDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGF  426 (521)
Q Consensus       350 l~~l~~~~~~~~~~~~~l~~~F~~~D~~--~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~  426 (521)
                      +..+.....++++++.+++.+|..+|.|  ++| |+.+||..+|.. +.......+.++|+.+|.|++|.|+++||+.++
T Consensus        33 ~~~l~~~~~ls~~ei~~l~~~F~~~D~d~~~~G~I~~~El~~~l~~-~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~  111 (226)
T 2zfd_A           33 PELLARDTVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK-TNKKESLFADRVFDLFDTKHNGILGFEEFARAL  111 (226)
T ss_dssp             THHHHHHSSCCHHHHHHHHHHHHHHHTSSSCSSSBCHHHHHHHHHS-CSSCCCHHHHHHHHHHCSSCSSSBCHHHHHHHH
T ss_pred             HHHHHHhCCCCHHHHHHHHHHHHHhCcccCCCCeEcHHHHHHHHhc-cCcccHHHHHHHHHHHcCCCCCcCcHHHHHHHH
Confidence            3445555678999999999999999999  999 999999999987 333334467889999999999999999999999


Q ss_pred             hhcc-CCCcHHHHHHHhHhhccCCCcceeHHHHHHHHH----hCCCCCCCCCCCChhHH----HHHHHHhcCCCCcceeH
Q 009980          427 SSLR-KSQGDDALRLCFQMYDIDRSGCITKEEVASMLR----ALPDDCLPVDITEPGKL----DEIFDLMDANNDGKVTF  497 (521)
Q Consensus       427 ~~~~-~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~----~~~~~~~~~~~~~~~~~----~~~f~~~D~~~dG~I~~  497 (521)
                      .... .....+.++.+|+.+|.|++|+|+.+||..++.    ..+..      .+++++    ..+|+.+|.|+||.|+|
T Consensus       112 ~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~g~~------~~~~~~~~~~~~~f~~~D~d~dG~I~~  185 (226)
T 2zfd_A          112 SVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMN------LKDTVIEDIIDKTFEEADTKHDGKIDK  185 (226)
T ss_dssp             HHTSTTSCHHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTCC------CCHHHHHHHHHHHHHHHCSSCSSEECH
T ss_pred             HHHccCCCHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHcCCC------CCHHHHHHHHHHHHHHhCCCCCCcCcH
Confidence            8765 345677899999999999999999999999985    34433      444444    55667999999999999


Q ss_pred             HHHHHHHhcCccH
Q 009980          498 DEFRAAMQRDSSL  510 (521)
Q Consensus       498 ~Ef~~~~~~~~~~  510 (521)
                      +||..++...+.+
T Consensus       186 ~EF~~~~~~~~~~  198 (226)
T 2zfd_A          186 EEWRSLVLRHPSL  198 (226)
T ss_dssp             HHHHHHHHHSGGG
T ss_pred             HHHHHHHHhChHH
Confidence            9999999987754

>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A

Probab=99.84  E-value=1.5e-20  Score=174.31  Aligned_cols=161  Identities=27%  Similarity=0.463  Sum_probs=130.2

Q ss_pred             HHhhhccCCCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhc-CCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHh
Q 009980          350 LKNLLGSHDLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAM-NMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFS  427 (521)
Q Consensus       350 l~~l~~~~~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~-~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~  427 (521)
                      ++.+.....++++++..+++.|..  .+++| |+.+||..++..+ +.......+.++|+.+|.|++|.|+|+||+.++.
T Consensus        52 l~~l~~~~~~s~~ei~~l~~~F~~--~d~~G~Is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~d~~G~I~~~Ef~~~l~  129 (229)
T 3dd4_A           52 LELLEAQSKFTKKELQILYRGFKN--ECPSGVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLS  129 (229)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHT--TCCSCCCCHHHHHHHHHHHSCSSSHHHHHHHHHHTTCSSCCSSCCHHHHHHHHH
T ss_pred             HHHHHHhcCCCHHHHHHHHHHHHh--hCCCCCcCHHHHHHHHHHHCCCCCcHHHHHHHHHHcCCCCCCeEeHHHHHHHHH
Confidence            334444455778888888888876  45678 9999999999985 4455566889999999999999999999999998


Q ss_pred             hccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCC----CC--CCCCCCChhHHHHHHHHhcCCCCcceeHHHHH
Q 009980          428 SLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPD----DC--LPVDITEPGKLDEIFDLMDANNDGKVTFDEFR  501 (521)
Q Consensus       428 ~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~----~~--~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~  501 (521)
                      .......++.++.+|+.+|.|++|+|+.+||..++..++.    ..  ......++++++.+|+.+|.|+||.|+|+||.
T Consensus       130 ~~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~EF~  209 (229)
T 3dd4_A          130 ILLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFI  209 (229)
T ss_dssp             HHHHSCHHHHHHHHHHHHCTTCSSCCBHHHHHHHHHHHHHHCC-----------CCTHHHHHHHHHCSSCSSBCCHHHHH
T ss_pred             HHcCCChHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHHHHhccccCCCcchhhHHHHHHHHHHHhcCCCCCcEeHHHHH
Confidence            8776777889999999999999999999999999986520    00  00112456689999999999999999999999


Q ss_pred             HHHhcCccHHH
Q 009980          502 AAMQRDSSLQD  512 (521)
Q Consensus       502 ~~~~~~~~~~~  512 (521)
                      +++...|.+..
T Consensus       210 ~~~~~~~~~~~  220 (229)
T 3dd4_A          210 ESCQKDENIMR  220 (229)
T ss_dssp             HHHHTCHHHHH
T ss_pred             HHHHhCHHHHH
Confidence            99999887653

>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*

Probab=99.84  E-value=1e-20  Score=170.93  Aligned_cols=143  Identities=19%  Similarity=0.237  Sum_probs=119.5

Q ss_pred             CCCHHHHHHHHHHHHhhhcCCCC-CCHHHHH-----HHHHhcCCCCCcc-----hHHHHHHHHcCCCCcceeHHHHHHHH
Q 009980          358 DLNEEEIQNLRIHFRTICANGDN-ATLSEFE-----EVLKAMNMSSLVP-----LAPRIFDLFDNNRDGTVDMREILCGF  426 (521)
Q Consensus       358 ~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~-----~~l~~~~~~~~~~-----~~~~~f~~~D~~~~g~I~~~ef~~~~  426 (521)
                      .++++++.+++.+|..+|.|++| |+.+||.     .+++.+|..++..     .+..+|+.+|.|++|.|+|+||+.++
T Consensus        13 ~~s~~~~~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~~   92 (195)
T 1qv0_A           13 FDNPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFLDGW   92 (195)
T ss_dssp             TTCHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTHHHHTTCCHHHHHHHHHHHHHHHHHTTCCTTCCBCHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHhHcCCCCCCcCcHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHcCCCCCceEcHHHHHHHH
Confidence            35899999999999999999999 9999999     6888888877665     58899999999999999999999987


Q ss_pred             hhccC-------CCcHHHHH----HHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcce
Q 009980          427 SSLRK-------SQGDDALR----LCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKV  495 (521)
Q Consensus       427 ~~~~~-------~~~~~~l~----~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I  495 (521)
                      .....       ....+.++    .+|+.+|.|++|+|+.+||..++..++..      .+++++..+|+.+|.|+||.|
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~g~~------~~~~~~~~~~~~~D~d~dg~i  166 (195)
T 1qv0_A           93 KQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGIS------PSQEDCEATFRHCDLDNAGDL  166 (195)
T ss_dssp             HHHHHHHHHHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHHHHHHHSSC------CCHHHHHHHHHHSCCCTTSCE
T ss_pred             HHHHhhhhhcccccHHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhCCC------CCHHHHHHHHHHhCCCCCCcC
Confidence            65321       11112344    89999999999999999999999987654      677899999999999999999


Q ss_pred             eHHHHHHHHhc
Q 009980          496 TFDEFRAAMQR  506 (521)
Q Consensus       496 ~~~Ef~~~~~~  506 (521)
                      +|+||..++..
T Consensus       167 ~~~eF~~~~~~  177 (195)
T 1qv0_A          167 DVDEMTRQHLG  177 (195)
T ss_dssp             EHHHHHHHHHH
T ss_pred             CHHHHHHHHHH
Confidence            99999998875

>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*

Probab=99.84  E-value=2.7e-20  Score=161.40  Aligned_cols=137  Identities=28%  Similarity=0.617  Sum_probs=120.1

Q ss_pred             CHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccC-CCcHHH
Q 009980          360 NEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRK-SQGDDA  437 (521)
Q Consensus       360 ~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~-~~~~~~  437 (521)
                      +++++.+++.+|..+|.|++| |+.+|| ..+..++..   +.+..+|+.+|.|++|.|+|+||+.++..... ....+.
T Consensus         1 s~~~~~~l~~~F~~~D~d~~G~i~~~el-~~l~~~~~~---~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~   76 (155)
T 3ll8_B            1 DADEIKRLGKRFKKLDLDNSGSLSVEEF-MSLPELQQN---PLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQK   76 (155)
T ss_dssp             CCHHHHHHHHHHHHHCTTCSSSBCHHHH-TTSGGGTTC---TTHHHHHHHHCTTCSSSBCHHHHHHHHGGGCSSCCHHHH
T ss_pred             CHHHHHHHHHHHHHhCcCCCCeEcHHHH-HHhhccccc---hHHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCHHHH
Confidence            467889999999999999999 999999 566666644   48999999999999999999999999987543 356688


Q ss_pred             HHHHhHhhccCCCcceeHHHHHHHHHh-CCCCCCCCCCCChhHHHHHHHH----hcCCCCcceeHHHHHHHHhc
Q 009980          438 LRLCFQMYDIDRSGCITKEEVASMLRA-LPDDCLPVDITEPGKLDEIFDL----MDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       438 l~~~f~~~D~d~~G~I~~~e~~~~l~~-~~~~~~~~~~~~~~~~~~~f~~----~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      ++.+|+.+|.|++|+|+.+||..++.. .+..      .+++++..+|+.    +|.|+||.|+|+||..++..
T Consensus        77 ~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~------~~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~  144 (155)
T 3ll8_B           77 LRFAFRIYDMDKDGYISNGELFQVLKMMVGNN------LKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGG  144 (155)
T ss_dssp             HHHHHHHHCTTCSSCBCHHHHHHHHHHHHGGG------SCHHHHHHHHHHHHHHHCTTSSSSBCHHHHHHHHGG
T ss_pred             HHHHHHHhCCCCCCcCcHHHHHHHHHHHhccC------CCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence            999999999999999999999999987 4543      566788888888    99999999999999999987

>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}

Probab=99.84  E-value=1.4e-20  Score=170.24  Aligned_cols=141  Identities=11%  Similarity=0.239  Sum_probs=127.7

Q ss_pred             CCCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhc-cCCCc
Q 009980          357 HDLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSL-RKSQG  434 (521)
Q Consensus       357 ~~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~-~~~~~  434 (521)
                      ..++++++.+++.+|..+|.|++| |+..||..+|+.+|..++..++..++..+    +|.|+|+||+.++... .....
T Consensus        49 ~~ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~l~~~~----~g~i~~~eF~~~~~~~~~~~~~  124 (196)
T 3dtp_E           49 AMFTQHQVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEA----PGPINFTMFLTIFGDRIAGTDE  124 (196)
T ss_dssp             CSSCTTTHHHHHHHHHHHCCSCSSBCCHHHHHHHHHTTSCCCCHHHHHHHHTTS----SSCCBHHHHHHHHHHCCCSSCC
T ss_pred             hhCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHc----cCCCcHHHHHHHHHHHhcCCCc
Confidence            457889999999999999999999 99999999999999999888888888766    8999999999998763 44456


Q ss_pred             HHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhcCc
Q 009980          435 DDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDS  508 (521)
Q Consensus       435 ~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~~~  508 (521)
                      .+.+..+|+.||.|++|+|+.+||..++ .++..      ++++++..+|..+|.|+||.|+|+||+.+|..++
T Consensus       125 ~~~l~~~F~~~D~d~~G~Is~~El~~~l-~~g~~------~~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~  191 (196)
T 3dtp_E          125 EDVIVNAFNLFDEGDGKCKEETLKRSLT-TWGEK------FSQDEVDQALSEAPIDGNGLIDIKKFAQILTKGA  191 (196)
T ss_dssp             HHHHHHHHHTTCSSSSCCBHHHHHHHHH-HSSSC------CCHHHHHHHHHSSCEETTEECHHHHHHHHHSSCC
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHH-HcCCC------CCHHHHHHHHHHcCCCCCCEEeHHHHHHHHHcCC
Confidence            7889999999999999999999999999 88765      6788999999999999999999999999998854

>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5

Probab=99.83  E-value=6.6e-20  Score=169.29  Aligned_cols=161  Identities=27%  Similarity=0.458  Sum_probs=132.0

Q ss_pred             HHhhhccCCCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCC-CCcchHHHHHHHHcCCCCcceeHHHHHHHHh
Q 009980          350 LKNLLGSHDLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMS-SLVPLAPRIFDLFDNNRDGTVDMREILCGFS  427 (521)
Q Consensus       350 l~~l~~~~~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~-~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~  427 (521)
                      +..+.....++++++.++...|+..  +++| |+.+||..+++.++.. .+..++..+|+.+|.|++|.|+++||+.++.
T Consensus        39 l~~l~~~~~~s~~ei~~l~~~Fd~~--d~~G~I~~~E~~~~l~~l~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~l~  116 (224)
T 1s1e_A           39 LEQLEAQTNFTKRELQVLYRGFKNE--CPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALS  116 (224)
T ss_dssp             HHHHHHHSSCCHHHHHHHHHHHHHH--CTTSCBCHHHHHHHHHTTCTTSCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHH
T ss_pred             HHHHHHHcCCCHHHHHHHHHHHHhh--CCCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHhcCCCCCcEeHHHHHHHHH
Confidence            3444445568888888877777654  4778 9999999999998754 5677899999999999999999999999998


Q ss_pred             hccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhC----CCCCCC--CCCCChhHHHHHHHHhcCCCCcceeHHHHH
Q 009980          428 SLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRAL----PDDCLP--VDITEPGKLDEIFDLMDANNDGKVTFDEFR  501 (521)
Q Consensus       428 ~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~----~~~~~~--~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~  501 (521)
                      .......+++++.+|+.+|.|++|+|+.+||..++..+    +....+  .+...++++..+|+.+|.|+||.|+|+||.
T Consensus       117 ~~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~EF~  196 (224)
T 1s1e_A          117 ILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFL  196 (224)
T ss_dssp             HHHHCCHHHHHHHHHHHHCTTCCSEECHHHHHHHHHHHHHHHTTCCCGGGCSSSHHHHHHHHHHHHCTTCSSCEEHHHHH
T ss_pred             HHccCCHHHHHHHHHHHHcCCCCCeECHHHHHHHHHHHHHHhcccCCCCCCHhHHHHHHHHHHHHhCCCCCCcEeHHHHH
Confidence            87767788899999999999999999999999999765    322110  011234689999999999999999999999


Q ss_pred             HHHhcCccHHH
Q 009980          502 AAMQRDSSLQD  512 (521)
Q Consensus       502 ~~~~~~~~~~~  512 (521)
                      .++...+.+.+
T Consensus       197 ~~~~~~~~l~~  207 (224)
T 1s1e_A          197 ESCQEDDNIMR  207 (224)
T ss_dssp             HHHHTCHHHHH
T ss_pred             HHHHhCHHHHH
Confidence            99999887653

>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A

Probab=99.83  E-value=1e-19  Score=166.06  Aligned_cols=155  Identities=25%  Similarity=0.429  Sum_probs=128.4

Q ss_pred             HHhhhccCCCCHHHHHHHHHHHHhhhcC--CCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHH
Q 009980          350 LKNLLGSHDLNEEEIQNLRIHFRTICAN--GDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGF  426 (521)
Q Consensus       350 l~~l~~~~~~~~~~~~~l~~~F~~~D~~--~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~  426 (521)
                      +..+.....++++++.+++.+|..+|.|  ++| |+.+||..+|.. ........+.++|+.+|.|++|.|+++||+.++
T Consensus        22 l~~l~~~~~~s~~~~~~l~~~F~~~D~d~~~~G~i~~~e~~~~l~~-~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~  100 (207)
T 2ehb_A           22 PELLASVTPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFR-NRNRRNLFADRIFDVFDVKRNGVIEFGEFVRSL  100 (207)
T ss_dssp             HHHHHHHSSCCHHHHHHHHHHHHHHTTSSSCSSCEEHHHHHHHHHS-CTTCCCHHHHHHHHHHCTTCSSEECHHHHHHHH
T ss_pred             HHHHHHhCCCCHHHHHHHHHHHHHhccccCCCCccCHHHHHHHHhc-cccccHHHHHHHHHHhcCCCCCeEeHHHHHHHH
Confidence            3444555678999999999999999999  999 999999999987 333334467889999999999999999999999


Q ss_pred             hhccC-CCcHHHHHHHhHhhccCCCcceeHHHHHHHHH----hCCCCCCCCCCCChhHH----HHHHHHhcCCCCcceeH
Q 009980          427 SSLRK-SQGDDALRLCFQMYDIDRSGCITKEEVASMLR----ALPDDCLPVDITEPGKL----DEIFDLMDANNDGKVTF  497 (521)
Q Consensus       427 ~~~~~-~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~----~~~~~~~~~~~~~~~~~----~~~f~~~D~~~dG~I~~  497 (521)
                      ..... ....+.++.+|+.+|.|++|+|+.+||..++.    ..+..      .+++++    ..+|+.+|.|+||.|+|
T Consensus       101 ~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~------~~~~~~~~~~~~~f~~~D~d~dG~I~~  174 (207)
T 2ehb_A          101 GVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESELV------LSEDMIEVMVDKAFVQADRKNDGKIDI  174 (207)
T ss_dssp             GGGSTTSCHHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHHHHHHTCC------CCHHHHHHHHHHHHHHHCTTCSSEECH
T ss_pred             HHHccCCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHcccc------cCHHHHHHHHHHHHHHhCCCCCCcCcH
Confidence            87653 35677899999999999999999999999985    33433      444444    55677999999999999


Q ss_pred             HHHHHHHhcCccHH
Q 009980          498 DEFRAAMQRDSSLQ  511 (521)
Q Consensus       498 ~Ef~~~~~~~~~~~  511 (521)
                      +||..++...+.+.
T Consensus       175 ~Ef~~~~~~~~~~~  188 (207)
T 2ehb_A          175 DEWKDFVSLNPSLI  188 (207)
T ss_dssp             HHHHHHHHHCGGGG
T ss_pred             HHHHHHHHhChHHH
Confidence            99999999877653

>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}

Probab=99.83  E-value=8.4e-20  Score=164.15  Aligned_cols=151  Identities=26%  Similarity=0.526  Sum_probs=125.8

Q ss_pred             CCCHHHHHHHHHHHHhhhcC-CCC-CCHHHHHHHHHhcCCC-CCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCc
Q 009980          358 DLNEEEIQNLRIHFRTICAN-GDN-ATLSEFEEVLKAMNMS-SLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQG  434 (521)
Q Consensus       358 ~~~~~~~~~l~~~F~~~D~~-~~g-i~~~el~~~l~~~~~~-~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~  434 (521)
                      .++.++   +..+|..+|.+ ++| |+.+||..+++.++.. .+.+.+..+|+.+|.|++|.|+++||..++...+...+
T Consensus        21 ~~~~~e---l~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~~   97 (190)
T 2l2e_A           21 RFDKKE---LQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDFKEFICALSVTSRGEL   97 (190)
T ss_dssp             CSCSHH---HHHHHHHHHHHSCCCEECHHHHHHHHHHHCCCSCHHHHHHHHHHHHCSSSTTCEEHHHHHHHHTTSSCSCS
T ss_pred             CCCHHH---HHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCCccHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHcCCCH
Confidence            345554   45568889999 799 9999999999998543 44568899999999999999999999999998887788


Q ss_pred             HHHHHHHhHhhccCCCcceeHHHHHHHHHhC----CCC--CCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhcCc
Q 009980          435 DDALRLCFQMYDIDRSGCITKEEVASMLRAL----PDD--CLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDS  508 (521)
Q Consensus       435 ~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~----~~~--~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~~~  508 (521)
                      .+.++.+|+.+|.|++|+|+.+||..++..+    +..  .......+++++..+|+.+|.|+||.|+++||..++...+
T Consensus        98 ~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~  177 (190)
T 2l2e_A           98 NDKLIWAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEGSKRDP  177 (190)
T ss_dssp             HHHHHHHHHHHCTTSCSCBCHHHHHHHHHHHHHHHHHHSCCCSSCCCTHHHHHHHHHHHTCCSSCCBCHHHHHHHHHTCT
T ss_pred             HHHHHHHHhHccCCCCCcCcHHHHHHHHHHHHHHhccccCcccccccHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhCc
Confidence            8999999999999999999999999998762    110  0011125667899999999999999999999999999987


Q ss_pred             cHH
Q 009980          509 SLQ  511 (521)
Q Consensus       509 ~~~  511 (521)
                      .+.
T Consensus       178 ~~~  180 (190)
T 2l2e_A          178 TIV  180 (190)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            664

>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A

Probab=99.83  E-value=2.1e-20  Score=171.24  Aligned_cols=161  Identities=16%  Similarity=0.310  Sum_probs=132.7

Q ss_pred             HHHHHhhhccCCCCHHHHHHHHHHHHhhhc-----CC-C--C-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcc-
Q 009980          347 TKKLKNLLGSHDLNEEEIQNLRIHFRTICA-----NG-D--N-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGT-  416 (521)
Q Consensus       347 ~~~l~~l~~~~~~~~~~~~~l~~~F~~~D~-----~~-~--g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~-  416 (521)
                      ..++.++.....++++++.++.+.|..+|.     |+ +  | |+.+||.. +..++..+.   ..++|+.+|.|++|. 
T Consensus        33 ~e~l~~l~~~t~~s~~ei~~l~~~F~~~D~~~~~~d~~~~dG~I~~~E~~~-l~~lg~~~~---~~~lf~~~D~d~dG~~  108 (214)
T 2l4h_A           33 KELLAEYQDLTFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS-LPELKANPF---KERICRVFSTSPAKDS  108 (214)
T ss_dssp             HHHHHHHHSCCSCCHHHHHHHHHHHHHHSCGGGCCHHHHTTSEECHHHHTT-CHHHHTSTT---HHHHHHHHCCSSSCCS
T ss_pred             HHHHHHHHHhCCCCHHHHHHHHHHHHHhCcccccccccccCCcCCHHHHHH-hhccCCChH---HHHHHHHhCcCCCCCE
Confidence            456677878888999999999999999998     55 5  9 99999999 888887654   567899999999999 


Q ss_pred             eeHHHHHHHHhhccCC-CcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHH----HHHHHhcCCC
Q 009980          417 VDMREILCGFSSLRKS-QGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLD----EIFDLMDANN  491 (521)
Q Consensus       417 I~~~ef~~~~~~~~~~-~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~----~~f~~~D~~~  491 (521)
                      |+|+||+.++...... ..++.++.+|+.||.|++|+|+.+||..++..++.... ....++++++    .+|+.+|.|+
T Consensus       109 I~f~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~-~~~~s~~e~~~~~~~~~~~~D~d~  187 (214)
T 2l4h_A          109 LSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGE-DTRLSASEMKQLIDNILEESDIDR  187 (214)
T ss_dssp             EEHHHHHHHHHHTSSCSCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHSSS-CTTCSCTHHHHHHHHHHHHHCCSC
T ss_pred             ecHHHHHHHHHHHcCCCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhcccc-CCCCCHHHHHHHHHHHHHHhCCCC
Confidence            9999999999875543 44678999999999999999999999999987653100 0013444555    4999999999


Q ss_pred             CcceeHHHHHHHHhcCccHHH
Q 009980          492 DGKVTFDEFRAAMQRDSSLQD  512 (521)
Q Consensus       492 dG~I~~~Ef~~~~~~~~~~~~  512 (521)
                      ||.|+|+||+.++...|.+..
T Consensus       188 dG~Is~~EF~~~~~~~p~~~~  208 (214)
T 2l4h_A          188 DGTINLSEFQHVISRSPDFAS  208 (214)
T ss_dssp             CSSBCSHHHHHHHHTCHHHHH
T ss_pred             CCcCCHHHHHHHHHhChHHHH
Confidence            999999999999998876653

>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A

Probab=99.83  E-value=5.5e-20  Score=167.85  Aligned_cols=158  Identities=22%  Similarity=0.372  Sum_probs=127.9

Q ss_pred             HhhhccCCCCHHHHHHHHHHHHhhhcC-CCC-CCHHHHHHHHHhcCCC-CCcchHHHHHHHHcCCCCcceeHHHHHHHHh
Q 009980          351 KNLLGSHDLNEEEIQNLRIHFRTICAN-GDN-ATLSEFEEVLKAMNMS-SLVPLAPRIFDLFDNNRDGTVDMREILCGFS  427 (521)
Q Consensus       351 ~~l~~~~~~~~~~~~~l~~~F~~~D~~-~~g-i~~~el~~~l~~~~~~-~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~  427 (521)
                      ..+.....++.+++.   .+|..+|.+ ++| |+.+||..++..++.. .+.+.+..+|+.+|.|++|.|+++||+.++.
T Consensus        22 ~~~~~~~~~~~~~i~---~~f~~~d~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~   98 (207)
T 2d8n_A           22 EELQLNTKFSEEELC---SWYQSFLKDCPTGRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLDGTLDFKEYVIALH   98 (207)
T ss_dssp             HHHHHHSSCCHHHHH---HHHHHHHHHCTTSEEEHHHHHHHHHHTCTTSCCHHHHHHHHHHHCTTCCSEEEHHHHHHHHH
T ss_pred             HHHHHHcCCCHHHHH---HHHHHHHhhCCCCCCCHHHHHHHHHHhccCCCcHHHHHHHHHHhcCCCCCeEeHHHHHHHHH
Confidence            334434446666554   457777777 689 9999999999998764 5667899999999999999999999999998


Q ss_pred             hccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhC----C----CCCCCCCCCChhHHHHHHHHhcCCCCcceeHHH
Q 009980          428 SLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRAL----P----DDCLPVDITEPGKLDEIFDLMDANNDGKVTFDE  499 (521)
Q Consensus       428 ~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~----~----~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~E  499 (521)
                      .......+++++.+|+.+|.|++|+|+.+||..++..+    +    ......+...++++..+|+.+|.|+||.|+|+|
T Consensus        99 ~~~~~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~f~~~D~d~dG~I~~~E  178 (207)
T 2d8n_A           99 MTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVMAIFKMITPEDVKLLPDDENTPEKRAEKIWKYFGKNDDDKLTEKE  178 (207)
T ss_dssp             HHSCSSSSTTHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHSCHHHHHTSCTTTSSHHHHHHHHHHHTTCCTTCCEEHHH
T ss_pred             HHcCCCHHHHHHHHHHHhcCCCCCeEcHHHHHHHHHHHHHHhccccCCCcccccccHHHHHHHHHHHcCCCCCCcCcHHH
Confidence            87766777889999999999999999999999999875    4    221111112346799999999999999999999


Q ss_pred             HHHHHhcCccHH
Q 009980          500 FRAAMQRDSSLQ  511 (521)
Q Consensus       500 f~~~~~~~~~~~  511 (521)
                      |+.++...+.+.
T Consensus       179 f~~~~~~~~~~~  190 (207)
T 2d8n_A          179 FIEGTLANKEIL  190 (207)
T ss_dssp             HHHHHHHCHHHH
T ss_pred             HHHHHHhChHHH
Confidence            999999877654

>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A

Probab=99.83  E-value=4.1e-20  Score=168.84  Aligned_cols=148  Identities=19%  Similarity=0.440  Sum_probs=125.6

Q ss_pred             HHHhhhccCCCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHh
Q 009980          349 KLKNLLGSHDLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFS  427 (521)
Q Consensus       349 ~l~~l~~~~~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~  427 (521)
                      .+..+.....++++++.+++.+|..+|.|++| |+.+||..++ .++..+.   ..++|+.+|.|++|.|+|+||+.++.
T Consensus        13 ~~~~l~~~~~ls~~~~~~l~~~F~~~D~d~dG~Is~~El~~~~-~lg~~~~---~~~l~~~~d~~~~g~i~~~EF~~~~~   88 (208)
T 2ct9_A           13 ELEEIKKETGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIP-ELAINPL---GDRIINAFFSEGEDQVNFRGFMRTLA   88 (208)
T ss_dssp             HHHHHHHHHCCCHHHHHHHHHHHHHHCTTCSSEECTGGGGGCH-HHHTSTT---HHHHHHTTSCTTCSCEEHHHHHHHHH
T ss_pred             HHHHHHHcCCCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHH-HcCCCCc---HHHHHHHHcCCCCCcCcHHHHHHHHH
Confidence            34455555678999999999999999999999 9999999864 5666543   46789999999999999999999987


Q ss_pred             hccCC----------------CcHHHHHHHhHhhccCCCcceeHHHHHHHHHhC-CCCCCCCCCCChhHHHHH----HHH
Q 009980          428 SLRKS----------------QGDDALRLCFQMYDIDRSGCITKEEVASMLRAL-PDDCLPVDITEPGKLDEI----FDL  486 (521)
Q Consensus       428 ~~~~~----------------~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~-~~~~~~~~~~~~~~~~~~----f~~  486 (521)
                      .....                ...+.++.+|+.+|.|++|+|+.+||..++..+ +..      .+++++..+    |+.
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~------~s~~~~~~l~~~~~~~  162 (208)
T 2ct9_A           89 HFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQVLRMMVGVN------ISDEQLGSIADRTIQE  162 (208)
T ss_dssp             TTSCCC-----------CCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHSCTT------CCHHHHHHHHHHHHHH
T ss_pred             hhccccchhhhcccccccccccHHHHHHHHHHHHCCCCCCEEcHHHHHHHHHHHhCCC------CCHHHHHHHHHHHHHH
Confidence            65321                256789999999999999999999999999875 654      566777777    999


Q ss_pred             hcCCCCcceeHHHHHHHHhc
Q 009980          487 MDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       487 ~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      +|.|+||.|+|+||..++..
T Consensus       163 ~D~d~dG~Is~~EF~~~~~~  182 (208)
T 2ct9_A          163 ADQDGDSAISFTEFVKVLEK  182 (208)
T ss_dssp             HCSSSSSSEEHHHHHHTTTT
T ss_pred             hCCCCCCcCcHHHHHHHHhc
Confidence            99999999999999999987

>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}

Probab=99.83  E-value=3e-20  Score=169.77  Aligned_cols=142  Identities=14%  Similarity=0.146  Sum_probs=119.1

Q ss_pred             CCCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCC--CCCcchHHHHH-------HHHcCCCCcceeHHHHHHHH
Q 009980          357 HDLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNM--SSLVPLAPRIF-------DLFDNNRDGTVDMREILCGF  426 (521)
Q Consensus       357 ~~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~--~~~~~~~~~~f-------~~~D~~~~g~I~~~ef~~~~  426 (521)
                      ..++++++.+++.+|..+|.|++| |+.+||..+++.++.  .++.+++..++       +.+|.|++|.|+++||+.++
T Consensus        28 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~l~~~~~~lf~~~D~d~dg~i~~~EF~~~~  107 (208)
T 2hpk_A           28 EDLHPKMLSRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNATDEQVEKMRDAVRVFFLHKGVEPVNGLLREDWVEAN  107 (208)
T ss_dssp             --------CHHHHHHHHHCTTCSSEECHHHHTHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCBTTTBEEGGGHHHHH
T ss_pred             HHcCHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHH
Confidence            456788899999999999999999 999999999999987  78888999999       99999999999999999987


Q ss_pred             h---------hcc-CCCcHHH-HHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcce
Q 009980          427 S---------SLR-KSQGDDA-LRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKV  495 (521)
Q Consensus       427 ~---------~~~-~~~~~~~-l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I  495 (521)
                      .         .+. .....++ ++.+|+.+|.|++|+|+.+||..++..++        .+++++..+|..+|.|+||.|
T Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g--------~~~~~~~~~~~~~D~d~dG~I  179 (208)
T 2hpk_A          108 RVFAEAERERERRGEPSLIALLSNSYYDVLDDDGDGTVDVDELKTMMKAFD--------VPQEAAYTFFEKADTDKSGKL  179 (208)
T ss_dssp             HHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTT--------SCTTHHHHHHHHHCTTCCSSB
T ss_pred             HHHhhhhhhhhccCChHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhC--------cCHHHHHHHHHHhCCCCCCcC
Confidence            6         332 2223334 89999999999999999999999998875        345589999999999999999


Q ss_pred             eHHHHHHHHhc
Q 009980          496 TFDEFRAAMQR  506 (521)
Q Consensus       496 ~~~Ef~~~~~~  506 (521)
                      +|+||..++..
T Consensus       180 ~~~EF~~~~~~  190 (208)
T 2hpk_A          180 ERTELVHLFRK  190 (208)
T ss_dssp             CHHHHHHHHHH
T ss_pred             cHHHHHHHHHH
Confidence            99999999876

>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*

Probab=99.82  E-value=3.5e-20  Score=165.67  Aligned_cols=156  Identities=15%  Similarity=0.314  Sum_probs=129.3

Q ss_pred             HhhhccCCCCHHHHHHHHHHHHhhhc-----CC-C--C-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcc-eeHH
Q 009980          351 KNLLGSHDLNEEEIQNLRIHFRTICA-----NG-D--N-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGT-VDMR  420 (521)
Q Consensus       351 ~~l~~~~~~~~~~~~~l~~~F~~~D~-----~~-~--g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~-I~~~  420 (521)
                      .++.....++++++.+++..|..+|.     |+ +  | |+.+||.. ++.+|..++   ..++|+.+|.|++|. |+|+
T Consensus         6 ~~l~~~~~ls~~~~~~l~~~F~~~D~~~~~~~~~~~~G~i~~~el~~-l~~~g~~~~---~~~l~~~~D~d~~G~~I~~~   81 (183)
T 1dgu_A            6 AEYQDLTFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS-LPELKANPF---KERICRVFSTSPAKDSLSFE   81 (183)
T ss_dssp             SCCCCCCSCCHHHHHHHHHHHHHHSCSTTCSSCCCTTTCSCHHHHHT-STTSSSCTT---HHHHHHHHSCSSSSCCCCHH
T ss_pred             HHHHHHcCCCHHHHHHHHHHHHHhCccccccccccccCcCcHHHHHH-HHhhhcCcH---HHHHHHHhCCCCCCCEecHH
Confidence            34556677999999999999999999     68 8  9 99999999 888887654   457899999999999 9999


Q ss_pred             HHHHHHhhccCC-CcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHH----HHHHhcCCCCcce
Q 009980          421 EILCGFSSLRKS-QGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDE----IFDLMDANNDGKV  495 (521)
Q Consensus       421 ef~~~~~~~~~~-~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~----~f~~~D~~~dG~I  495 (521)
                      ||+.++...... ..++.++.+|+.||.|++|+|+.+||..++..++.... ....+++++..    +|+.+|.|+||.|
T Consensus        82 EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~d~dG~I  160 (183)
T 1dgu_A           82 DFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGE-DTRLSASEMKQLIDNILEESDIDRDGTI  160 (183)
T ss_dssp             HHHHHHHHHSTTCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHSSSC-CCHHHHHHHHHHHHHHHHHHCTTSSSEE
T ss_pred             HHHHHHHHhcCCCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhcccc-cCCCCHHHHHHHHHHHHHHhCCCCCCeE
Confidence            999998875443 44568999999999999999999999999987654100 00144556664    9999999999999


Q ss_pred             eHHHHHHHHhcCccHH
Q 009980          496 TFDEFRAAMQRDSSLQ  511 (521)
Q Consensus       496 ~~~Ef~~~~~~~~~~~  511 (521)
                      +|+||..++...+.+.
T Consensus       161 ~~~EF~~~~~~~~~~~  176 (183)
T 1dgu_A          161 NLSEFQHVISRSPDFA  176 (183)
T ss_dssp             EHHHHHHHHCSSCHHH
T ss_pred             cHHHHHHHHHhChHHH
Confidence            9999999999877654

>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5

Probab=99.82  E-value=4.7e-20  Score=164.83  Aligned_cols=140  Identities=15%  Similarity=0.236  Sum_probs=121.9

Q ss_pred             CCHHHHHHHHHHHHhh-hcCCCC-CCHHHHHHHHHhcC----CCCCcchHHHH-----------HHHHcCCCCcceeHHH
Q 009980          359 LNEEEIQNLRIHFRTI-CANGDN-ATLSEFEEVLKAMN----MSSLVPLAPRI-----------FDLFDNNRDGTVDMRE  421 (521)
Q Consensus       359 ~~~~~~~~l~~~F~~~-D~~~~g-i~~~el~~~l~~~~----~~~~~~~~~~~-----------f~~~D~~~~g~I~~~e  421 (521)
                      +++.++.+++.+|..+ |.|++| |+.+||..++..++    ..++...+..+           |+.+|.|++|.|+++|
T Consensus         2 ls~~~~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~dG~I~~~E   81 (185)
T 2sas_A            2 LNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEE   81 (185)
T ss_dssp             CCHHHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHH
T ss_pred             cCHHHHHHHHHHHHHheeCCCCCeEcHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEcHHH
Confidence            5678889999999999 999999 99999999999887    77777667654           9999999999999999


Q ss_pred             HHHHHhhccC---------CCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCC
Q 009980          422 ILCGFSSLRK---------SQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANND  492 (521)
Q Consensus       422 f~~~~~~~~~---------~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~d  492 (521)
                      |+.++.....         ......++.+|+.+|.|++|+|+.+||..++..++        .+++++..+|+.+|.|+|
T Consensus        82 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~g--------~~~~~~~~~~~~~D~d~d  153 (185)
T 2sas_A           82 YLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQ--------LQCADVPAVYNVITDGGK  153 (185)
T ss_dssp             HHHHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSC--------CCCSSHHHHHHHHHTTTT
T ss_pred             HHHHHHHHhccccchhhhhHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhC--------CCHHHHHHHHHHhcCCCC
Confidence            9998876422         23457899999999999999999999999987654        234589999999999999


Q ss_pred             cceeHHHHHHHHhc
Q 009980          493 GKVTFDEFRAAMQR  506 (521)
Q Consensus       493 G~I~~~Ef~~~~~~  506 (521)
                      |.|+++||..++..
T Consensus       154 G~i~~~ef~~~~~~  167 (185)
T 2sas_A          154 VTFDLNRYKELYYR  167 (185)
T ss_dssp             SCCSHHHHHHHHHH
T ss_pred             CcCcHHHHHHHHHH
Confidence            99999999999875

>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A

Probab=99.82  E-value=3e-19  Score=160.53  Aligned_cols=162  Identities=25%  Similarity=0.413  Sum_probs=130.9

Q ss_pred             HHHhhhccCCCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCC-CCCcchHHHHHHHHcCCCCcceeHHHHHHHH
Q 009980          349 KLKNLLGSHDLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNM-SSLVPLAPRIFDLFDNNRDGTVDMREILCGF  426 (521)
Q Consensus       349 ~l~~l~~~~~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~-~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~  426 (521)
                      .+..+.....++++++.++...|...  +++| |+.+||..+++.++. ....+.+..+|+.+|.|++|.|+++||..++
T Consensus        12 ~l~~l~~~~~~~~~~i~~~~~~fd~~--~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~   89 (190)
T 1fpw_A           12 DLTCLKQSTYFDRREIQQWHKGFLRD--CPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVL   89 (190)
T ss_dssp             HHHHHTTTCCSTHHHHHHHHHHHHHH--CTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEECHHHHHHHH
T ss_pred             HHHHHHHhcCCCHHHHHHHHHHHHHH--CCCCcCcHHHHHHHHHHHcCCCCcHHHHHHHHHHHCCCCCCcEeHHHHHHHH
Confidence            44556656678888876665544433  3788 999999999998853 3445678999999999999999999999999


Q ss_pred             hhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhC----CCCC--CCCCCCChhHHHHHHHHhcCCCCcceeHHHH
Q 009980          427 SSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRAL----PDDC--LPVDITEPGKLDEIFDLMDANNDGKVTFDEF  500 (521)
Q Consensus       427 ~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~----~~~~--~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef  500 (521)
                      ...+...+.++++.+|+.+|.|++|+|+.+||..++..+    +...  ......+++++..+|+.+|.|+||.|+++||
T Consensus        90 ~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef  169 (190)
T 1fpw_A           90 STTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEF  169 (190)
T ss_dssp             HHHSCCCSTHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCCCCHHHHHHHHHHHHTTTCSSEEEHHHH
T ss_pred             HHHccCCcHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHHHhccccCcccccchHHHHHHHHHHHhCCCCCCcCcHHHH
Confidence            888777788899999999999999999999999999872    3210  0111245678999999999999999999999


Q ss_pred             HHHHhcCccHHH
Q 009980          501 RAAMQRDSSLQD  512 (521)
Q Consensus       501 ~~~~~~~~~~~~  512 (521)
                      ..++...+.+.+
T Consensus       170 ~~~~~~~~~~~~  181 (190)
T 1fpw_A          170 REGSKVDPSIIG  181 (190)
T ss_dssp             HHHHHSSTTHHH
T ss_pred             HHHHHhChHHHH
Confidence            999999887653

>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}

Probab=99.82  E-value=5.9e-20  Score=166.41  Aligned_cols=146  Identities=27%  Similarity=0.493  Sum_probs=123.2

Q ss_pred             HHHHHHHhhhcC-CCC-CCHHHHHHHHHhcCCCCCc-chHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHh
Q 009980          366 NLRIHFRTICAN-GDN-ATLSEFEEVLKAMNMSSLV-PLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCF  442 (521)
Q Consensus       366 ~l~~~F~~~D~~-~~g-i~~~el~~~l~~~~~~~~~-~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f  442 (521)
                      +++.+|..+|.+ ++| |+.+||..+++.++..+.. +.+..+|+.+|.|++|.|+++||+.++..+......+.++.+|
T Consensus        15 el~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~~F   94 (198)
T 2r2i_A           15 ECHQWYKKFMTECPSGQLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKLRWYF   94 (198)
T ss_dssp             CHHHHHHHHHHHCTTSEECHHHHHHHHTCCSCCHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHSSCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCcchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHccCchHHHHHHHH
Confidence            457789999988 899 9999999999998876554 4589999999999999999999999999887778888999999


Q ss_pred             HhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCC-hhHHHHHHHHhcCCCCcceeHHHHHHHHhcCccHH
Q 009980          443 QMYDIDRSGCITKEEVASMLRALPDDCLPVDITE-PGKLDEIFDLMDANNDGKVTFDEFRAAMQRDSSLQ  511 (521)
Q Consensus       443 ~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~-~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~~~~~~  511 (521)
                      +.+|.|++|+|+.+||..++..++.........+ ++.+..+|+.+|.|+||.|+++||+.++...+.+.
T Consensus        95 ~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~  164 (198)
T 2r2i_A           95 KLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGELSLEEFMEGVQKDEVLL  164 (198)
T ss_dssp             HHHCTTCSSCEEHHHHHHHHHHTTGGGGSSSCCCHHHHHHHHHHHHCTTCSSEECHHHHHHHHTTCHHHH
T ss_pred             HHhcCCCCCcCcHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHcCHHHH
Confidence            9999999999999999999987652100000123 34589999999999999999999999999766554

>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A

Probab=99.82  E-value=9.3e-20  Score=177.23  Aligned_cols=145  Identities=17%  Similarity=0.200  Sum_probs=84.0

Q ss_pred             hhhhccCHHHHHHHHHhc---cCCCCCCCCHHHHHcC------CcccCCCCcchhchHHHHHHHHhH----HHHhHHHHH
Q 009980          266 QTWKNISSSAKQLISSLL---TVDPNRRPSAQELLNH------PWVIGDSAKEEEMDAEIVSRLQSF----NARRKLRAA  332 (521)
Q Consensus       266 ~~~~~~s~~~~~li~~~l---~~dp~~R~t~~~~l~h------~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~  332 (521)
                      ..|+.++.++.+|.+++.   ..+|..|.+.++.+.|      +|+....           +++++-    .+..+.+.+
T Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~r~~~~~~~   80 (323)
T 1ij5_A           12 ANVKKVHENLEELQKKLDHTSFAHKEDRDRLEAQIAQKEQEQKAKLAEYD-----------QKVQNEFDARERAEREREA   80 (323)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCC-----CCHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHcChhhhhHHHHHHHHh
Confidence            456778899999999998   8999999999998887      6764321           111111    000111111


Q ss_pred             HH----------HhhhhhHH-HHhhHHHHHhhhccCCCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcc
Q 009980          333 AI----------ASVLSSTI-FLRRTKKLKNLLGSHDLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVP  400 (521)
Q Consensus       333 ~~----------~~~~~~~~-~~~r~~~l~~l~~~~~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~  400 (521)
                      +.          ..++.... .......++..  ...++++++..+..+|..+|.|++| |+.+||..+|..+|..++..
T Consensus        81 a~g~~~~e~q~~~~vl~~l~~~f~~~~~lkk~--~~~Ls~~e~~~l~~~F~~~D~d~dG~Is~~El~~~L~~lg~~~~~~  158 (323)
T 1ij5_A           81 ARGDAAAEKQRLASLLKDLEDDASGYNRLRPS--KPMLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAKYADTIPEG  158 (323)
T ss_dssp             TTSCHHHHHHHHHHHHHHC---------------CCCCCHHHHHHHHHHHTSSSSTTSSCCCHHHHHHHHHHHHTTSCSS
T ss_pred             hcCCCCCcchhhHHHHHHHHHHHHHhhhHHHH--HHhCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHcCCCCCHH
Confidence            11          11110000 00011111111  2468999999999999999999999 99999999999998877776


Q ss_pred             hHHHHHHHHcCCCCcceeHHHHH
Q 009980          401 LAPRIFDLFDNNRDGTVDMREIL  423 (521)
Q Consensus       401 ~~~~~f~~~D~~~~g~I~~~ef~  423 (521)
                      ++..+|..+|.|++|.|+|.+|.
T Consensus       159 ~i~~l~~~~D~d~~G~I~f~ef~  181 (323)
T 1ij5_A          159 PLKKLFVMVENDTKGRMSYITLV  181 (323)
T ss_dssp             HHHHHHHHHHHCCSSTHHHHHHT
T ss_pred             HHHHHHHHhcCCCCCcCcHHHHH
Confidence            66666655555444444444443

>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A

Probab=99.82  E-value=1.4e-19  Score=180.35  Aligned_cols=144  Identities=23%  Similarity=0.457  Sum_probs=128.8

Q ss_pred             CCCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhc-cCCCc
Q 009980          357 HDLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSL-RKSQG  434 (521)
Q Consensus       357 ~~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~-~~~~~  434 (521)
                      ..++++++.+++++|+.+|.|++| |+.+||..+|+.++...+.+++..+|+.+|.|++|.|+|+||+.++... .....
T Consensus       304 ~~ls~eei~el~~~F~~fD~D~dG~Is~~EL~~~L~~lg~~~s~eel~~Lf~~~D~DgdG~IsfeEFl~ll~~~~~~~~~  383 (450)
T 3sg6_A          304 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS  383 (450)
T ss_dssp             -CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTSSSSEEHHHHHHHHHC------C
T ss_pred             ccCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcccHHHHHHHHHhhccccch
Confidence            357888999999999999999999 9999999999999999999999999999999999999999999998764 33445


Q ss_pred             HHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          435 DDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       435 ~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      .+.++.+|+.+|.|++|+|+.+||+.++..++..      +++++++.+|..+|.|+||.|+|+||+.+|..
T Consensus       384 ~e~l~~aFk~fD~D~dG~Is~eELr~~L~~lG~~------ls~eei~~Lf~~~D~D~DG~IsfdEFv~~L~~  449 (450)
T 3sg6_A          384 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK------LTDEEVDEMIREADIDGDGQVNYEEFVQMMTA  449 (450)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCC------CCHHHHHHHHHHHCTTSSSSEEHHHHHHHHC-
T ss_pred             hhHHHHHHHHhCCCCCCeEeHHHHHHHHHHhCCC------CCHHHHHHHHHHhCCCCCCcEeHHHHHHHHhc
Confidence            6789999999999999999999999999988764      67889999999999999999999999999863

>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8

Probab=99.82  E-value=1.4e-19  Score=162.79  Aligned_cols=131  Identities=17%  Similarity=0.291  Sum_probs=119.9

Q ss_pred             HHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHh
Q 009980          364 IQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCF  442 (521)
Q Consensus       364 ~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f  442 (521)
                      .++++++|..+|.|++| |+.+||..++..++...+.+++..+|+.+|.|++|.|+|+||+.++...      ..++.+|
T Consensus        26 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~------~~~~~~F   99 (191)
T 1y1x_A           26 NQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKDLHHFI------LSMREGF   99 (191)
T ss_dssp             TSCHHHHHHHHCTTCSSSBCHHHHHHHHCBTTBCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH------HHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHH------HHHHHHH
Confidence            35688999999999999 9999999999877888888899999999999999999999999988643      5789999


Q ss_pred             HhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          443 QMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       443 ~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      +.+|.|++|+|+.+||..++..++..      .+++++..+|+.+|.|+||.|+|+||..++..
T Consensus       100 ~~~D~d~~G~i~~~e~~~~l~~~g~~------~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  157 (191)
T 1y1x_A          100 RKRDSSGDGRLDSNEVRAALLSSGYQ------VSEQTFQALMRKFDRQRRGSLGFDDYVELSIF  157 (191)
T ss_dssp             HHHCTTSSSCBCHHHHHHHHHTTSCC------CCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             HHhCCCCCCeEcHHHHHHHHHHhCCC------CCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            99999999999999999999987654      67789999999999999999999999999875

>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A

Probab=99.82  E-value=2.5e-19  Score=161.07  Aligned_cols=161  Identities=26%  Similarity=0.519  Sum_probs=128.4

Q ss_pred             HHHhhhccCCCCHHHHHHHHHHHHhhhcC-CCC-CCHHHHHHHHHhc-CCCCCcchHHHHHHHHcCCCCcceeHHHHHHH
Q 009980          349 KLKNLLGSHDLNEEEIQNLRIHFRTICAN-GDN-ATLSEFEEVLKAM-NMSSLVPLAPRIFDLFDNNRDGTVDMREILCG  425 (521)
Q Consensus       349 ~l~~l~~~~~~~~~~~~~l~~~F~~~D~~-~~g-i~~~el~~~l~~~-~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~  425 (521)
                      .+..+.....++.+++.+   +|+.+|.+ ++| |+.+||..+++.+ +.....+.+..+|+.+|.|++|.|+++||..+
T Consensus        12 ~l~~l~~~~~~~~~~i~~---~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~   88 (190)
T 1g8i_A           12 VVEELTRKTYFTEKEVQQ---WYKGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFIQA   88 (190)
T ss_dssp             HHHHHHHTSSSCHHHHHH---HHHHHHHHCTTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTCSSEEEHHHHHHH
T ss_pred             HHHHHHHccCCCHHHHHH---HHHHHHHhCCCCcCCHHHHHHHHHHhCCCCChHHHHHHHHHHHhcCCCCeEeHHHHHHH
Confidence            344455556677776655   46666666 789 9999999999987 22344568999999999999999999999999


Q ss_pred             HhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhC----CCCC--CCCCCCChhHHHHHHHHhcCCCCcceeHHH
Q 009980          426 FSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRAL----PDDC--LPVDITEPGKLDEIFDLMDANNDGKVTFDE  499 (521)
Q Consensus       426 ~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~----~~~~--~~~~~~~~~~~~~~f~~~D~~~dG~I~~~E  499 (521)
                      +.........+.++.+|+.+|.|++|+|+.+||..++..+    +...  ......+++++..+|+.+|.|+||.|+++|
T Consensus        89 ~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~i~~~e  168 (190)
T 1g8i_A           89 LSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQE  168 (190)
T ss_dssp             HHHHHHCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHHC-----CCGGGSSHHHHHHHHHHHHCSSCSSEEEHHH
T ss_pred             HHHhcCCCHHHHHHHHHHhhcCCCCCeECHHHHHHHHHHHHHHhCCccCCccccccHHHHHHHHHHHhcCCCCCcEeHHH
Confidence            9887777788899999999999999999999999998772    3210  001124567899999999999999999999


Q ss_pred             HHHHHhcCccHHH
Q 009980          500 FRAAMQRDSSLQD  512 (521)
Q Consensus       500 f~~~~~~~~~~~~  512 (521)
                      |..++...+.+..
T Consensus       169 f~~~~~~~~~~~~  181 (190)
T 1g8i_A          169 FQEGSKADPSIVQ  181 (190)
T ss_dssp             HHHHHHHCHHHHH
T ss_pred             HHHHHHhChHHHH
Confidence            9999998876543

>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A

Probab=99.82  E-value=1.5e-19  Score=158.44  Aligned_cols=136  Identities=18%  Similarity=0.252  Sum_probs=116.8

Q ss_pred             HHHHHHHHHHhhhcCCCC-CCHHHHHHHH----HhcCCCCCcchHHH-----------HHHHHcCCCCcceeHHHHHHHH
Q 009980          363 EIQNLRIHFRTICANGDN-ATLSEFEEVL----KAMNMSSLVPLAPR-----------IFDLFDNNRDGTVDMREILCGF  426 (521)
Q Consensus       363 ~~~~l~~~F~~~D~~~~g-i~~~el~~~l----~~~~~~~~~~~~~~-----------~f~~~D~~~~g~I~~~ef~~~~  426 (521)
                      ++++++.+|..+|.|++| |+.+||..++    +.+|..++.+++..           +|+.+|.|++|.|+++||+.++
T Consensus         2 ~~~~l~~~F~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~   81 (166)
T 3akb_A            2 YERRIAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIADRDGDQRITREEFVTGA   81 (166)
T ss_dssp             HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSSSCEEHHHHHHTH
T ss_pred             HHHHHHHHHhHHcCCCCCCcCHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            457889999999999999 9999999975    45688888777764           4799999999999999999988


Q ss_pred             hhccCCCc-------HHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHH
Q 009980          427 SSLRKSQG-------DDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDE  499 (521)
Q Consensus       427 ~~~~~~~~-------~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~E  499 (521)
                      ........       .+.++.+|+.+|.|++|+|+.+||..++..++        .+++++..+|+.+|.|+||.|+++|
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~E~~~~l~~~~--------~~~~~~~~~~~~~D~d~dg~i~~~e  153 (166)
T 3akb_A           82 VKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTARALTAFG--------VPEDLARQAAAALDTDGDGKVGETE  153 (166)
T ss_dssp             HHHHHHSHHHHHHHHHHHHHHHHHHHCSSSSSCCBHHHHHHHHHHTT--------CCHHHHHHHHHHHCTTCSSBCCHHH
T ss_pred             HHHhccCccchHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhC--------CCHHHHHHHHHHhCCCCCCcCcHHH
Confidence            76533221       23489999999999999999999999998865        4567899999999999999999999


Q ss_pred             HHHHHhc
Q 009980          500 FRAAMQR  506 (521)
Q Consensus       500 f~~~~~~  506 (521)
                      |..+|..
T Consensus       154 f~~~~~~  160 (166)
T 3akb_A          154 IVPAFAR  160 (166)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999875

>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A

Probab=99.82  E-value=1.3e-19  Score=160.25  Aligned_cols=132  Identities=19%  Similarity=0.263  Sum_probs=119.3

Q ss_pred             HHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcC-CCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHH
Q 009980          363 EIQNLRIHFRTICANGDN-ATLSEFEEVLKAMN-MSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRL  440 (521)
Q Consensus       363 ~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~-~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~  440 (521)
                      +..+++++|..+|.|++| |+.+||..+++.++ ...+..++..+|+.+|.|++|.|+++||+.++...      ..++.
T Consensus         5 ~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~ef~~~~~~~------~~~~~   78 (172)
T 2znd_A            5 DQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYI------TDWQN   78 (172)
T ss_dssp             -CHHHHHHHHHHCTTCSSCEEHHHHHHHCCCSSSSCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHHHH------HHHHH
T ss_pred             chhHHHHHHHHhCCCCCCcCcHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH------HHHHH
Confidence            446789999999999999 99999999999988 66778899999999999999999999999987643      57999


Q ss_pred             HhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          441 CFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       441 ~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      +|+.+|.|++|+|+.+||..++..++..      .+++++..+|+.+|.|+||.|+|+||..++..
T Consensus        79 ~F~~~D~d~~G~i~~~el~~~l~~~g~~------~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  138 (172)
T 2znd_A           79 VFRTYDRDNSGMIDKNELKQALSGFGYR------LSDQFHDILIRKFDRQGRGQIAFDDFIQGCIV  138 (172)
T ss_dssp             HHHHHCTTCSSEECHHHHHHHHHHTTCC------CCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred             HHHHHCCCCCCccCHHHHHHHHHHcCCC------CCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            9999999999999999999999988654      67789999999999999999999999998864

>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5

Probab=99.81  E-value=2.5e-19  Score=161.48  Aligned_cols=157  Identities=30%  Similarity=0.540  Sum_probs=125.5

Q ss_pred             HhhhccCCCCHHHHHHHHHHHHhhhcC-CCC-CCHHHHHHHHHhcCCCCC-cchHHHHHHHHcCCCCcceeHHHHHHHHh
Q 009980          351 KNLLGSHDLNEEEIQNLRIHFRTICAN-GDN-ATLSEFEEVLKAMNMSSL-VPLAPRIFDLFDNNRDGTVDMREILCGFS  427 (521)
Q Consensus       351 ~~l~~~~~~~~~~~~~l~~~F~~~D~~-~~g-i~~~el~~~l~~~~~~~~-~~~~~~~f~~~D~~~~g~I~~~ef~~~~~  427 (521)
                      ..+.....++++++.   .+|..+|.+ ++| |+.+||..+++.++.... .+.+..+|+.+|.|++|.|+++||..++.
T Consensus        14 ~~l~~~~~~~~~~i~---~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~   90 (193)
T 1bjf_A           14 QDLLESTDFTEHEIQ---EWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALS   90 (193)
T ss_dssp             HHHHHHSSCCHHHHH---HHHHHHHHHSTTSEEEHHHHHHHHTTTSSSSCCHHHHHHHHHHHCSSCSSEEEHHHHHHHHH
T ss_pred             HHHHHHcCCCHHHHH---HHHHHHHHHCCCCCcCHHHHHHHHHHhcCcCChHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            334444557777665   557778877 889 999999999999876543 45689999999999999999999999998


Q ss_pred             hccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhC----CC-CCCCC-CCCChhHHHHHHHHhcCCCCcceeHHHHH
Q 009980          428 SLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRAL----PD-DCLPV-DITEPGKLDEIFDLMDANNDGKVTFDEFR  501 (521)
Q Consensus       428 ~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~----~~-~~~~~-~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~  501 (521)
                      ..+...+.+.++.+|+.+|.|++|+|+.+||..++..+    +. ...+. ....++.+..+|+.+|.|+||.|+++||.
T Consensus        91 ~~~~~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~  170 (193)
T 1bjf_A           91 VTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFI  170 (193)
T ss_dssp             HHTSSCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGGSSHHHHHHHHHHHSCTTCSSEECHHHHH
T ss_pred             HHcCCCHHHHHHHHHhhcCCCCCCeECHHHHHHHHHHHHHHhccccCCCcccccHHHHHHHHHHHhCCCCCCeEeHHHHH
Confidence            88777888899999999999999999999999998763    21 00110 01223469999999999999999999999


Q ss_pred             HHHhcCccH
Q 009980          502 AAMQRDSSL  510 (521)
Q Consensus       502 ~~~~~~~~~  510 (521)
                      .++...+.+
T Consensus       171 ~~~~~~~~~  179 (193)
T 1bjf_A          171 RGAKSDPSI  179 (193)
T ss_dssp             HHHHHCTHH
T ss_pred             HHHhcCHHH
Confidence            999865543

>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A

Probab=99.81  E-value=8.4e-20  Score=153.85  Aligned_cols=128  Identities=27%  Similarity=0.380  Sum_probs=113.8

Q ss_pred             HHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhh---ccCCCcHHHHHHHh
Q 009980          367 LRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSS---LRKSQGDDALRLCF  442 (521)
Q Consensus       367 l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~---~~~~~~~~~l~~~f  442 (521)
                      ++++|..+|.|++| |+.+||..++..++...+.+++..+|+.+|.|++|.|+++||..++..   .....+.++++.+|
T Consensus         2 l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~f   81 (134)
T 1jfj_A            2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLY   81 (134)
T ss_dssp             HHHHHHHHCTTCSSEEEHHHHHHHHHTTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHHHHHHHH
T ss_pred             HHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhcccccCCCHHHHHHHH
Confidence            57889999999999 999999999999998888889999999999999999999999999862   22333456799999


Q ss_pred             HhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHH
Q 009980          443 QMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAM  504 (521)
Q Consensus       443 ~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~  504 (521)
                      +.+|.|++|+|+.+||..++..++..          .+..+|+.+|.|+||.|+|+||..+|
T Consensus        82 ~~~D~d~~G~i~~~e~~~~l~~~~~~----------~~~~~~~~~D~~~dg~i~~~ef~~~l  133 (134)
T 1jfj_A           82 KLMDVDGDGKLTKEEVTSFFKKHGIE----------KVAEQVMKADANGDGYITLEEFLEFS  133 (134)
T ss_dssp             HHHCCSSSSEEEHHHHHHHHTTTTCH----------HHHHHHHHHHCSSSSEEEHHHHHHHH
T ss_pred             HHHCCCCCCccCHHHHHHHHHHhCHH----------HHHHHHHHhCCCCCCcEeHHHHHHHh
Confidence            99999999999999999999875432          28899999999999999999999876

>2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei}

Probab=99.81  E-value=2.7e-20  Score=172.24  Aligned_cols=142  Identities=23%  Similarity=0.215  Sum_probs=121.2

Q ss_pred             CCCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHH-HHHhcCCCCCcchHHHHHHHH---------cCCCCcceeHHHHHHH
Q 009980          357 HDLNEEEIQNLRIHFRTICANGDN-ATLSEFEE-VLKAMNMSSLVPLAPRIFDLF---------DNNRDGTVDMREILCG  425 (521)
Q Consensus       357 ~~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~-~l~~~~~~~~~~~~~~~f~~~---------D~~~~g~I~~~ef~~~  425 (521)
                      ..++++++.+++.+|..+|.|++| |+.+||.. +++.++..++..++..++..+         |.|++|.|+|+||+.+
T Consensus        43 ~~ls~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~lg~~~~~~~~~~~~~~~f~~~~~~~~D~d~~G~I~~~EF~~~  122 (226)
T 2lvv_A           43 RDKDAESKSRRIELFKQFDTNGTGKLGFREVLDGCYGILKLDEFTTHLPDIVQRAFDKAKDLGNKVKGVGEEDLVEFLEF  122 (226)
T ss_dssp             SSCCHHHHHHHHHHHHHHGGGSCSCBCSHHHHHHHHHTTCCTTTSSSCHHHHHHHHHHHHHHHHHHSCCCCCSCBCHHHH
T ss_pred             hhCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhcccCCCCCCCCcCCHHHHHHH
Confidence            357899999999999999999999 99999998 666778887777777777776         9999999999999996


Q ss_pred             HhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhC---CCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHH
Q 009980          426 FSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRAL---PDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRA  502 (521)
Q Consensus       426 ~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~---~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~  502 (521)
                      +........++.++.+|+.||.|++|+|+.+||..++..+   +..        ..++..+|..+|.|+||.|+|+||..
T Consensus       123 ~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~g~~--------~~e~~~~~~~~D~d~dG~Is~~EF~~  194 (226)
T 2lvv_A          123 RLMLCYIYDIFELTVMFDTMDKDGSLLLELQEFKEALPKLKEWGVD--------ITDATTVFNEIDTNGSGVVTFDEFSC  194 (226)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSCSSCCEECHHHHHHHHHHHHHHTCC--------CCSCHHHHHHHCCSCSSCEEHHHHHH
T ss_pred             HHHHHhccCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHHhhcCCC--------HHHHHHHHHHhCCCCCCcEeHHHHHH
Confidence            5443333345689999999999999999999999999875   322        22588999999999999999999999


Q ss_pred             HHhc
Q 009980          503 AMQR  506 (521)
Q Consensus       503 ~~~~  506 (521)
                      +|..
T Consensus       195 ~~~~  198 (226)
T 2lvv_A          195 WAVT  198 (226)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            9976

>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A

Probab=99.81  E-value=8.7e-20  Score=161.46  Aligned_cols=137  Identities=20%  Similarity=0.293  Sum_probs=118.8

Q ss_pred             CHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcC----CCCCcch-H--------HHHHHHHcCCCCcceeHHHHHHH
Q 009980          360 NEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMN----MSSLVPL-A--------PRIFDLFDNNRDGTVDMREILCG  425 (521)
Q Consensus       360 ~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~----~~~~~~~-~--------~~~f~~~D~~~~g~I~~~ef~~~  425 (521)
                      +++++.+++.+|..+|.|++| |+.+||..+++.++    ..++..+ +        ..+|+.+|  ++|.|+++||+.+
T Consensus         1 s~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~D--~~g~i~~~EF~~~   78 (174)
T 1q80_A            1 SDLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVA--GGKGIDETTFINS   78 (174)
T ss_dssp             CHHHHHHHHHHHHHHCTTCSSEESHHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHTGGGTT--TTSCEEHHHHHHH
T ss_pred             CHHHHHHHHHHHHhcCCCCCCcEeHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHhcC--CCCeEcHHHHHHH
Confidence            467889999999999999999 99999999999987    7777666 5        35788888  8999999999998


Q ss_pred             HhhccCC-----CcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHH
Q 009980          426 FSSLRKS-----QGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEF  500 (521)
Q Consensus       426 ~~~~~~~-----~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef  500 (521)
                      +......     ...+.++.+|+.+|.|++|+|+.+||..++..++        .+++++..+|+.+|.|+||.|+|+||
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g--------~~~~~~~~~~~~~D~d~dg~i~~~ef  150 (174)
T 1q80_A           79 MKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLG--------LDKTMAPASFDAIDTNNDGLLSLEEF  150 (174)
T ss_dssp             HHHHTTSTTCHHHHHTHHHHHHHHHCTTSSSSBCHHHHHHHHHHHT--------CCGGGHHHHHHHHCTTCSSSBCHHHH
T ss_pred             HHHHcCcccHHHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHcC--------CCHHHHHHHHHHhCCCCCceEeHHHH
Confidence            8775431     1246799999999999999999999999998763        35668999999999999999999999


Q ss_pred             HHHHhc
Q 009980          501 RAAMQR  506 (521)
Q Consensus       501 ~~~~~~  506 (521)
                      ..+|..
T Consensus       151 ~~~~~~  156 (174)
T 1q80_A          151 VIAGSD  156 (174)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999864

>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5

Probab=99.81  E-value=4.3e-20  Score=157.28  Aligned_cols=131  Identities=18%  Similarity=0.284  Sum_probs=116.3

Q ss_pred             HHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCC---CcHHHHHH
Q 009980          365 QNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKS---QGDDALRL  440 (521)
Q Consensus       365 ~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~---~~~~~l~~  440 (521)
                      .+++.+|..+|.|++| |+.+||..+++.+|..++..++..++.    +++|.|+|+||+.++......   ...+.++.
T Consensus         5 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~----~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~   80 (140)
T 1ggw_A            5 SPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIES----TLPAEVDMEQFLQVLNRPNGFDMPGDPEEFVK   80 (140)
T ss_dssp             TTTHHHHHHTCSSSSSEECHHHHHHHHHHTSCCCCHHHHHHHHT----TSCSSEEHHHHHHHHCTTSSSSSSCCHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHh----CCCCcCcHHHHHHHHHHHhcccCcccHHHHHH
Confidence            4678899999999999 999999999999999888878888776    889999999999998775432   23478999


Q ss_pred             HhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          441 CFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       441 ~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      +|+.+|.|++|+|+.+||..++..++..      .+++++..+|+.+|. +||.|+|+||..+|..
T Consensus        81 ~F~~~D~d~~G~i~~~el~~~l~~~g~~------~~~~~~~~~~~~~d~-~dg~i~~~eF~~~~~~  139 (140)
T 1ggw_A           81 GFQVFDKDATGMIGVGELRYVLTSLGEK------LSNEEMDELLKGVPV-KDGMVNYHDFVQMILA  139 (140)
T ss_dssp             HHHTTCSSCSSCCCHHHHHHHHHHHHSC------SCHHHHHHHHHHTTC-SSCCSTTTHHHHHHHC
T ss_pred             HHHHhCCCCCCcEeHHHHHHHHHHcCCC------CCHHHHHHHHHhccC-CCCcEeHHHHHHHHhc
Confidence            9999999999999999999999987654      677899999999999 9999999999999875

>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}

Probab=99.80  E-value=6.6e-20  Score=167.83  Aligned_cols=146  Identities=26%  Similarity=0.475  Sum_probs=120.3

Q ss_pred             HHHHHHHhhhcC-CCC-CCHHHHHHHHHhcCCCCCc-chHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHh
Q 009980          366 NLRIHFRTICAN-GDN-ATLSEFEEVLKAMNMSSLV-PLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCF  442 (521)
Q Consensus       366 ~l~~~F~~~D~~-~~g-i~~~el~~~l~~~~~~~~~-~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f  442 (521)
                      +++.+|+.+|.+ ++| |+.+||..+++.++..+.. +.+.++|+.+|.|++|.|+++||+.++..+......+.++.+|
T Consensus        20 ei~~~f~~fD~~~~~G~is~~El~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~l~~~F   99 (211)
T 2ggz_A           20 ETHVWYRTFMMEYPSGLQTLHEFKTLLGLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYF   99 (211)
T ss_dssp             ----CCCSHHHHCTTSEEEHHHHHHHTTCCSCCHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHSCSSHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCcchHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhccCchHHHHHHHH
Confidence            457779999988 899 9999999999988876543 4589999999999999999999999998877777888999999


Q ss_pred             HhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhcCccHH
Q 009980          443 QMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDSSLQ  511 (521)
Q Consensus       443 ~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~~~~~~  511 (521)
                      +.+|.|++|+|+.+||..++..++..........++.+..+|+.+|.|+||.|+|+||+.++...+.+.
T Consensus       100 ~~~D~d~~G~I~~~E~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~  168 (211)
T 2ggz_A          100 KLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGELTLEEFINGMAKDQDLL  168 (211)
T ss_dssp             HHHCTTCSSSBCHHHHHHHHHHHTTSSCCCSCTHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHTTTTTH
T ss_pred             HHhcCCCCCcCcHHHHHHHHHHHHhhcCCccccHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHhCHHHH
Confidence            999999999999999999998764211001112334689999999999999999999999999876654

>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi}

Probab=99.80  E-value=4.2e-20  Score=170.10  Aligned_cols=144  Identities=19%  Similarity=0.156  Sum_probs=121.9

Q ss_pred             CCCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHh-cCCCCCcchHHHHHHHH---------cCCCCcceeHHHHHHH
Q 009980          357 HDLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKA-MNMSSLVPLAPRIFDLF---------DNNRDGTVDMREILCG  425 (521)
Q Consensus       357 ~~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~-~~~~~~~~~~~~~f~~~---------D~~~~g~I~~~ef~~~  425 (521)
                      ..++++++.+++.+|..+|.|++| |+.+||..+|.. +|..++..++..++..+         |.|++|.|+|.||+.+
T Consensus        40 ~~ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~I~~~EF~~~  119 (219)
T 3cs1_A           40 REKTAEAKQRRIELFKKFDKNETGKLCYDEVYSGCLEVLKLDEFTSRVRDITKRAFDKSRTLGSKLENKGSEDFVEFLEF  119 (219)
T ss_dssp             CSSSHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCGGGTCSCHHHHHHHHHHHHHHHHHHHHTSCCCSSBCHHHH
T ss_pred             ccCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHhhhhccCCCCcCCHHHHHHH
Confidence            457899999999999999999999 999999999987 78877777776655432         3488999999999988


Q ss_pred             HhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCC-CCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHH
Q 009980          426 FSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPD-DCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAM  504 (521)
Q Consensus       426 ~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~-~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~  504 (521)
                      +.........+.++.+|+.||.|++|+|+.+||..++..++. .      .++++++.+|+.+|.|+||.|+|+||..+|
T Consensus       120 ~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~------~~~~e~~~l~~~~D~d~dG~I~~~EF~~~~  193 (219)
T 3cs1_A          120 RLMLCYIYDFFELTVMFDEIDASGNMLVDEEEFKRAVPKLEAWG------AKVEDPAALFKELDKNGTGSVTFDEFAAWA  193 (219)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHHHHHT------CCCSCHHHHHHHHCTTSSSEEEHHHHHHHH
T ss_pred             HHHHhccchHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhcccC------CCHHHHHHHHHHhCCCCCCcEeHHHHHHHH
Confidence            755433334678999999999999999999999999987654 2      345579999999999999999999999998


Q ss_pred             hc
Q 009980          505 QR  506 (521)
Q Consensus       505 ~~  506 (521)
                      ..
T Consensus       194 ~~  195 (219)
T 3cs1_A          194 SA  195 (219)
T ss_dssp             HH
T ss_pred             HH
Confidence            76

>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}

Probab=99.80  E-value=4.7e-19  Score=167.19  Aligned_cols=161  Identities=25%  Similarity=0.506  Sum_probs=132.2

Q ss_pred             HHhhhccCCCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcC-CCCCcchHHHHHHHHcCCCCcceeHHHHHHHHh
Q 009980          350 LKNLLGSHDLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMN-MSSLVPLAPRIFDLFDNNRDGTVDMREILCGFS  427 (521)
Q Consensus       350 l~~l~~~~~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~-~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~  427 (521)
                      +.++.....++.+++..+...|..  .+++| |+.+||..++..++ .......+..+|+.+|.|++|.|+++||+.++.
T Consensus        79 l~~l~~~~~~s~~ei~~l~~~fd~--~~~~G~I~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~l~  156 (256)
T 2jul_A           79 LDQLQAQTKFTKKELQSLYRGFKN--ECPTGLVDEDTFKLIYSQFFPQGDATTYAHFLFNAFDADGNGAIHFEDFVVGLS  156 (256)
T ss_dssp             HHHHHHHTTSCHHHHHHHHHHHHH--HCTTSSEEHHHHHHHHHHHCCSSCCHHHHHHHHHHSSCSCCSEECSHHHHHHHH
T ss_pred             HHHHHHHhCCCHHHHHHHHHHHHh--hCCCCcCCHHHHHHHHHHHcccCCcHHHHHHHHHHhccCCCCcCcHHHHHHHHH
Confidence            344444556888888877666653  24788 99999999999985 445566899999999999999999999999998


Q ss_pred             hccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhC----CCCCCC--CCCCChhHHHHHHHHhcCCCCcceeHHHHH
Q 009980          428 SLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRAL----PDDCLP--VDITEPGKLDEIFDLMDANNDGKVTFDEFR  501 (521)
Q Consensus       428 ~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~----~~~~~~--~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~  501 (521)
                      .+.....+++++.+|+.+|.|++|+|+.+||..++..+    +....+  .....++++..+|+.+|.|+||.|+++||.
T Consensus       157 ~~~~~~~~~~l~~~F~~~D~d~dG~I~~~Ef~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~  236 (256)
T 2jul_A          157 ILLRGTVHEKLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEFL  236 (256)
T ss_dssp             HHHSCCHHHHHHHHHHHTCCSSSSCBCHHHHHHHHHHHHHHCCCCCSCCSCCCCHHHHHHHHHHHSCCSTTCSBCHHHHH
T ss_pred             HHhccChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCCcccchhhHHHHHHHHHHHHCCCCCCcEeHHHHH
Confidence            88777888999999999999999999999999999765    321110  112456789999999999999999999999


Q ss_pred             HHHhcCccHHH
Q 009980          502 AAMQRDSSLQD  512 (521)
Q Consensus       502 ~~~~~~~~~~~  512 (521)
                      .++...+.+.+
T Consensus       237 ~~~~~~~~l~~  247 (256)
T 2jul_A          237 ETCQKDENIMN  247 (256)
T ss_dssp             HHHHHCSSHHH
T ss_pred             HHHHhCHHHHH
Confidence            99999887763

>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A

Probab=99.80  E-value=2.5e-19  Score=158.49  Aligned_cols=130  Identities=18%  Similarity=0.332  Sum_probs=118.2

Q ss_pred             HHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhc-C-------CCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCC
Q 009980          363 EIQNLRIHFRTICANGDN-ATLSEFEEVLKAM-N-------MSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQ  433 (521)
Q Consensus       363 ~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~-~-------~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~  433 (521)
                      ++.+++.+|..+| |++| |+.+||..+++.+ |       ...+..++..+|+.+|.|++|.|+|+||+.++..     
T Consensus         2 ~~~~l~~~F~~~D-d~~G~i~~~el~~~l~~~~g~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~-----   75 (173)
T 1alv_A            2 EVRQFRRLFAQLA-GDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNN-----   75 (173)
T ss_dssp             HHHHHHHHHHHHH-GGGTSBCHHHHHHHHHHHHHTCSTTCCSCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH-----
T ss_pred             chhHHHHHHHHHh-CCCCCcCHHHHHHHHHHhhhcccccccCCCCHHHHHHHHHHHcCCCCCccCHHHHHHHHHH-----
Confidence            5778999999999 9999 9999999999997 6       5667789999999999999999999999998874     


Q ss_pred             cHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          434 GDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       434 ~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                       .+.++.+|+.+|.|++|+|+.+||..++..++..      .+++++..+|+.+| |+||.|+|+||..++..
T Consensus        76 -~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~------~~~~~~~~~~~~~d-d~dg~i~~~eF~~~~~~  140 (173)
T 1alv_A           76 -IKKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFH------LNEHLYSMIIRRYS-DEGGNMDFDNFISCLVR  140 (173)
T ss_dssp             -HHHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCC------CCHHHHHHHHHHHT-CSSSCBCHHHHHHHHHH
T ss_pred             -HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCC------CCHHHHHHHHHHhc-CCCCcCcHHHHHHHHHH
Confidence             3679999999999999999999999999987654      56789999999999 99999999999999875

>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A

Probab=99.80  E-value=4.9e-19  Score=151.85  Aligned_cols=132  Identities=12%  Similarity=0.173  Sum_probs=119.5

Q ss_pred             HHHHHHHHHHHhhhcCC-CC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhc-cCCCcHHHH
Q 009980          362 EEIQNLRIHFRTICANG-DN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSL-RKSQGDDAL  438 (521)
Q Consensus       362 ~~~~~l~~~F~~~D~~~-~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~-~~~~~~~~l  438 (521)
                      +++.+++.+|..+|.|+ +| |+.+||..+++.+|..++..++..+|+.+|.+    |+|+||+.++... ......+.+
T Consensus        11 ~~~~~l~~~F~~~D~d~~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~----i~~~eF~~~~~~~~~~~~~~~~l   86 (146)
T 2qac_A           11 EEKVDESDVRIYFNEKSSGGKISIDNASYNARKLGLAPSSIDEKKIKELYGDN----LTYEQYLEYLSICVHDKDNVEEL   86 (146)
T ss_dssp             HHHSCHHHHHHHHHHHCBTTBEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSE----ECHHHHHHHHHHTCCTTCCHHHH
T ss_pred             HHHHHHHHHHHHhCccCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCC----CCHHHHHHHHHHHhcCcchHHHH
Confidence            45567899999999999 99 99999999999999999999999999999987    9999999998753 344567889


Q ss_pred             HHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHh
Q 009980          439 RLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQ  505 (521)
Q Consensus       439 ~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~  505 (521)
                      +.+|+.+|.|++|+|+.+||..++..++..      .+++++..+|+.+  |+||.|+|+||..+|.
T Consensus        87 ~~~F~~~D~d~~G~I~~~el~~~l~~~g~~------~~~~~~~~~~~~~--d~dg~i~~~eF~~~l~  145 (146)
T 2qac_A           87 IKMFAHFDNNCTGYLTKSQMKNILTTWGDA------LTDQEAIDALNAF--SSEDNIDYKLFCEDIL  145 (146)
T ss_dssp             HHHHHTTCTTCSSEEEHHHHHHHHHHSSSC------CCHHHHHHHHHHH--CSSSEEEHHHHHHHHT
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHHhCCC------CCHHHHHHHHHHc--CCCCcCcHHHHHHHHh
Confidence            999999999999999999999999988754      6788999999999  9999999999999886

>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A

Probab=99.78  E-value=6.8e-19  Score=159.36  Aligned_cols=134  Identities=20%  Similarity=0.319  Sum_probs=120.3

Q ss_pred             CCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCC-----CCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCC
Q 009980          359 LNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNM-----SSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKS  432 (521)
Q Consensus       359 ~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~-----~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~  432 (521)
                      .++.+++++++ |..+|.|++| |+.+||..+++.+|.     ..+..++..+|+.+|.|++|.|+|+||+.++...   
T Consensus        27 ~~~~~~~~l~~-F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~eF~~~~~~~---  102 (198)
T 1juo_A           27 FPGQTQDPLYG-YFAAVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVL---  102 (198)
T ss_dssp             CTTCCCCTTHH-HHHHHHTTTTEECHHHHHHHHHHHTTTCSSCCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH---
T ss_pred             CCccccHHHHH-HHHHhCCCCCcCCHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhCCCCCCeECHHHHHHHHHHH---
Confidence            45667788899 9999999999 999999999999986     4567789999999999999999999999988753   


Q ss_pred             CcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhcC
Q 009980          433 QGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRD  507 (521)
Q Consensus       433 ~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~~  507 (521)
                         +.++.+|+.+|.|++|+|+.+||..++..++..      .++++++.+|+.+  |+||.|+|+||..++...
T Consensus       103 ---~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~------~~~~~~~~l~~~~--d~dg~i~~~eF~~~~~~~  166 (198)
T 1juo_A          103 ---NGWRQHFISFDTDRSGTVDPQELQKALTTMGFR------LSPQAVNSIAKRY--STNGKITFDDYIACCVKL  166 (198)
T ss_dssp             ---HHHHHHHHTTCTTCCSEECHHHHHHHHHHTTCC------CCHHHHHHHHHHT--CSSSSEEHHHHHHHHHHH
T ss_pred             ---HHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCC------CCHHHHHHHHHHh--CCCCeEcHHHHHHHHHHH
Confidence               579999999999999999999999999988754      6778999999999  899999999999988753

>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8

Probab=99.77  E-value=4.9e-18  Score=149.20  Aligned_cols=124  Identities=21%  Similarity=0.349  Sum_probs=112.1

Q ss_pred             HHHHhhhcCCCC-CCHHHHHHHHHhcCC-----CCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHh
Q 009980          369 IHFRTICANGDN-ATLSEFEEVLKAMNM-----SSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCF  442 (521)
Q Consensus       369 ~~F~~~D~~~~g-i~~~el~~~l~~~~~-----~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f  442 (521)
                      +.|..+|.|++| |+.+||..+++.+|.     ..+..++..+|+.+|.|++|.|+|+||+.++...      +.++.+|
T Consensus         5 ~~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~------~~~~~~F   78 (167)
T 1gjy_A            5 YGYFASVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVL------NGWRQHF   78 (167)
T ss_dssp             HHHHHHHCCTTSCBCHHHHHHHHHHHTCSTTSCCCCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHH------HHHHHHH
T ss_pred             HHHHHHHcCCCCcCCHHHHHHHHHhhcccCCCCCcCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH------HHHHHHH
Confidence            358899999999 999999999999987     4567789999999999999999999999988653      6799999


Q ss_pred             HhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          443 QMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       443 ~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      +.+|.|++|+|+.+||..++..++..      .+++++..+|+.+  |+||.|+|+||..++..
T Consensus        79 ~~~D~d~~G~i~~~el~~~l~~~g~~------~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~  134 (167)
T 1gjy_A           79 ISFDSDRSGTVDPQELQKALTTMGFR------LNPQTVNSIAKRY--STSGKITFDDYIACCVK  134 (167)
T ss_dssp             HHHCTTCCSEECHHHHHHHHHTTTCC------CCHHHHHHHHHHT--CBTTBEEHHHHHHHHHH
T ss_pred             HHhCCCCCCcCCHHHHHHHHHHcCCC------CCHHHHHHHHHHh--CcCCcCcHHHHHHHHHH
Confidence            99999999999999999999987654      6778999999999  89999999999998865

>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A

Probab=99.77  E-value=4e-18  Score=149.44  Aligned_cols=125  Identities=17%  Similarity=0.299  Sum_probs=112.9

Q ss_pred             HHHHhhhcCCCC-CCHHHHHHHHHhcCC-----CCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHh
Q 009980          369 IHFRTICANGDN-ATLSEFEEVLKAMNM-----SSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCF  442 (521)
Q Consensus       369 ~~F~~~D~~~~g-i~~~el~~~l~~~~~-----~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f  442 (521)
                      ..|..+|.|++| |+.+||..+++.+|.     .++..++..+|+.+|.|++|.|+|+||+.++...      +.++.+|
T Consensus         3 ~~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~------~~~~~~F   76 (165)
T 1k94_A            3 YTYFSAVAGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAAL------NAWKENF   76 (165)
T ss_dssp             HHHHHHHHGGGTSBCHHHHHHHHHHHTTTTTSCCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHH------HHHHHHH
T ss_pred             HHHHHHhCCCCCcCCHHHHHHHHHHhccccCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH------HHHHHHH
Confidence            459999999999 999999999999987     5567899999999999999999999999987653      6799999


Q ss_pred             HhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhcC
Q 009980          443 QMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRD  507 (521)
Q Consensus       443 ~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~~  507 (521)
                      +.+|.|++|+|+.+||..++..++..      .+++++..+++.+  |+||.|+|+||..++...
T Consensus        77 ~~~D~d~~G~i~~~el~~~l~~~g~~------~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~~  133 (165)
T 1k94_A           77 MTVDQDGSGTVEHHELRQAIGLMGYR------LSPQTLTTIVKRY--SKNGRIFFDDYVACCVKL  133 (165)
T ss_dssp             HHHCTTCCSBCCHHHHHHHHHHTTCC------CCHHHHHHHHHHH--CBTTBCBHHHHHHHHHHH
T ss_pred             HHhCCCCCceECHHHHHHHHHHhCCC------CCHHHHHHHHHHh--CCCCeEcHHHHHHHHHHH
Confidence            99999999999999999999988754      6778999999999  899999999999998753

>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}

Probab=99.76  E-value=2.9e-18  Score=151.15  Aligned_cols=118  Identities=12%  Similarity=0.124  Sum_probs=100.8

Q ss_pred             hcCCCC-CCHHHHHHHHHhc------CCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhcc
Q 009980          375 CANGDN-ATLSEFEEVLKAM------NMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDI  447 (521)
Q Consensus       375 D~~~~g-i~~~el~~~l~~~------~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~  447 (521)
                      +.|++| |+.+||+.+|+.+      +..++.+++..+|+.+|.|++|.|+|+||+.++...      .+++.+|+.|| 
T Consensus        14 ~~~~dG~I~~~EL~~~l~~l~~~~~~g~~~~~~~~~~l~~~~D~d~~G~I~f~EF~~~~~~~------~~l~~aF~~fD-   86 (174)
T 2i7a_A           14 LVPRGSDIDATQLQGLLNQELLTGPPGDMFSLDECRSLVALMELKVNGRLDQEEFARLWKRL------VHYQHVFQKVQ-   86 (174)
T ss_dssp             SCC-CCCEEHHHHHHHHHHHHC-----CCCCHHHHHHHHHHHCSSCSSEECHHHHHHHHHHH------HHHHHHHHHHC-
T ss_pred             cCCCCCcCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH------HHHHHHHHHhc-
Confidence            567888 9999999999988      556677789999999999999999999999887643      57889999999 


Q ss_pred             CCCcceeHHHHHHHHHhC----CCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          448 DRSGCITKEEVASMLRAL----PDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       448 d~~G~I~~~e~~~~l~~~----~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      |++|+|+.+||+.++..+    +..      .++++++.+++.+| |+||.|+|+||..+|..
T Consensus        87 d~~G~I~~~El~~~l~~l~~~~G~~------~~~~~~~~l~~~~d-d~dG~I~~~EF~~~~~~  142 (174)
T 2i7a_A           87 TSPGVLLSSDLWKAIENTDFLRGIF------ISRELLHLVTLRYS-DSVGRVSFPSLVCFLMR  142 (174)
T ss_dssp             SBTTBEEGGGHHHHHHTCGGGTTCC------CCHHHHHHHHHHHS-CTTSEECHHHHHHHHHH
T ss_pred             CCCCcCCHHHHHHHHHHhHhccCCC------CCHHHHHHHHHHHc-CCCCeEcHHHHHHHHHH
Confidence            999999999999999887    654      56778999999999 99999999999998865

>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A

Probab=99.76  E-value=7.7e-19  Score=166.40  Aligned_cols=143  Identities=20%  Similarity=0.341  Sum_probs=122.2

Q ss_pred             CCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCC------cchHHHHHHHHcCCCCcceeHHHHHHHHhhc-
Q 009980          358 DLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSL------VPLAPRIFDLFDNNRDGTVDMREILCGFSSL-  429 (521)
Q Consensus       358 ~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~------~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~-  429 (521)
                      .+++.+..+++.+|..+|.|++| |+.+||..+++.+|..++      ...+..+|+.+|.|++|.|+|+||+.++... 
T Consensus         9 ~l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~l~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~Ef~~~~~~~~   88 (263)
T 2f33_A            9 QSSLITASQFFEIWLHFDADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQYGQRDDGKIGIVELAHVLPTEE   88 (263)
T ss_dssp             TTSCCCHHHHHHHHHHHCTTCSSSBCSHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHTTGGGCCBCHHHHHHHTTSCT
T ss_pred             hcCcccHHHHHHHHHHhCCCCCCCcCHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHhCCCCCCcCcHHHHHHHHhhhh
Confidence            35667778899999999999999 999999999998865433      3678899999999999999999999988643 


Q ss_pred             --------cCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhC----CCCCCCCCCCChhHHHH----HHHHhcCCCCc
Q 009980          430 --------RKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRAL----PDDCLPVDITEPGKLDE----IFDLMDANNDG  493 (521)
Q Consensus       430 --------~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~----~~~~~~~~~~~~~~~~~----~f~~~D~~~dG  493 (521)
                              ......++++.+|+.+|.|++|+|+.+||..++..+    +..      .+++++..    +|+.+|.|++|
T Consensus        89 ~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~g~~------~~~~~~~~~~~~~~~~~d~~~dg  162 (263)
T 2f33_A           89 NFLLLFRCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKT------VDDTKLAEYTDLMLKLFDSNNDG  162 (263)
T ss_dssp             THHHHHGGGTSSCHHHHHHHHTTSSTTTCSSBCHHHHHHHHHHHHHHHTSC------CCHHHHHHHHHHHHHHTCSSSSS
T ss_pred             hHHHHHHHhhccHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHhhcCCC------CCHHHHHHHHHHHHHhcCCCCCC
Confidence                    345567889999999999999999999999999876    443      45556665    99999999999


Q ss_pred             ceeHHHHHHHHhc
Q 009980          494 KVTFDEFRAAMQR  506 (521)
Q Consensus       494 ~I~~~Ef~~~~~~  506 (521)
                      .|+|+||..++..
T Consensus       163 ~i~~~ef~~~~~~  175 (263)
T 2f33_A          163 KLELTEMARLLPV  175 (263)
T ss_dssp             CBCHHHHHHHSCT
T ss_pred             eEcHHHHHHHHHH
Confidence            9999999998864

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.76  E-value=1e-18  Score=171.34  Aligned_cols=158  Identities=13%  Similarity=0.132  Sum_probs=101.8

Q ss_pred             eeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCcccccccccc---ccccHHHHHHHH
Q 009980           12 YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQ---VSVSDALLTNEI   88 (521)
Q Consensus        12 Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~E~   88 (521)
                      |++++.||+|++|.||+|.+.   +|+.||||+++........ .        .....+......   ..........|.
T Consensus        97 Y~I~~~IG~Gk~a~VY~a~d~---~G~~vAvKi~r~~~~sfr~-v--------~~~r~~~~~~~~~~~~~~~rl~A~kE~  164 (397)
T 4gyi_A           97 YSVGSRIGVGKESDIMIVADE---KGKQKVLKIHRLGRISFRT-V--------KANRDYLRNRSTGSWMYLSRLAAIKEF  164 (397)
T ss_dssp             SEEEEEEEECSSEEEEEEECT---TCCEEEEEEECTTEECCCC-C--------C--CEECTTSCHHHHHHHHHHHHHHHH
T ss_pred             EEecCEeeeCCceEEEEEECC---CCCEEEEEEEecccccHHH-H--------HHHHHHHHhhccccHHHHHHHHHHHHH
Confidence            899999999999999999985   5889999998643221100 0        000000000000   001111234678


Q ss_pred             HHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 009980           89 LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDL  168 (521)
Q Consensus        89 ~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dl  168 (521)
                      ..|.++     .++++.-. ..+.... .+|||||+.|++|.+..      ....+..++.||+.+|.|||+.|||||||
T Consensus       165 ~nL~rL-----~~~gv~vp-~p~~~~~-~~LVME~i~G~~L~~l~------~~~~~~~l~~qll~~l~~lH~~gIVHrDL  231 (397)
T 4gyi_A          165 AFMKAL-----YEEGFPVP-EPIAQSR-HTIVMSLVDALPMRQVS------SVPDPASLYADLIALILRLAKHGLIHGDF  231 (397)
T ss_dssp             HHHHHH-----HHTTCSCC-CEEEEET-TEEEEECCSCEEGGGCC------CCSCHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             HHHHHH-----HhcCCCCC-eeeeccC-ceEEEEecCCccHhhhc------ccHHHHHHHHHHHHHHHHHHHCCCcCCCC
Confidence            888887     33333221 1121122 37999999999885432      22346678999999999999999999999


Q ss_pred             CCCcEEEeeCCCC-------CCEEEeecCCCcc
Q 009980          169 KPENCLFLNDRED-------SPLKIMDFGLSSV  194 (521)
Q Consensus       169 kp~Nil~~~~~~~-------~~~kl~Dfg~a~~  194 (521)
                      ||.|||+..+...       ..+.|+||+.+..
T Consensus       232 Kp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~  264 (397)
T 4gyi_A          232 NEFNILIREEKDAEDPSSITLTPIIIXFPQMVS  264 (397)
T ss_dssp             STTSEEEEEEECSSCTTSEEEEEEECCCTTCEE
T ss_pred             CHHHEEEeCCCCcccccccccceEEEEeCCccc
Confidence            9999999553211       1388999997764

>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group}

Probab=99.76  E-value=2.5e-18  Score=152.69  Aligned_cols=143  Identities=20%  Similarity=0.274  Sum_probs=114.7

Q ss_pred             HHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHc---CCCCcceeHHHHHHHHhhccCCCcHHH
Q 009980          362 EEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFD---NNRDGTVDMREILCGFSSLRKSQGDDA  437 (521)
Q Consensus       362 ~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D---~~~~g~I~~~ef~~~~~~~~~~~~~~~  437 (521)
                      .++.+++..|..+|  ++| |+.+||..++   |..++.+.+.++|+.+|   .+++|.|++.||..++..+......++
T Consensus        25 ~~~~~~~~~F~~~D--~dG~I~~~el~~~l---g~~~~~~~~~~i~~~~d~~~~~~~~~i~~~ef~~~~~~~~~~~~~~~   99 (179)
T 3a8r_A           25 DGWAAVEKRFNQLQ--VDGVLLRSRFGKCI---GMDGSDEFAVQMFDSLARKRGIVKQVLTKDELKDFYEQLTDQGFDNR   99 (179)
T ss_dssp             CCHHHHHHHHHHHC--BTTBEEGGGHHHHH---TCCSCHHHHHHHHHHHHHHHTCCSSEECHHHHHHHHHHHHCCCHHHH
T ss_pred             hhHHHHHHHHhccC--CCCCCcHHHHHHHH---CCCCcHHHHHHHHHHHHHhccCCCCCcCHHHHHHHHHHHcCCCHHHH
Confidence            55778899999999  788 9999999865   66777778889999888   577899999999998876655566788


Q ss_pred             HHHHhHhhccCCCcceeHHHHHHHHH-hCCCCCC-CCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhcCcc
Q 009980          438 LRLCFQMYDIDRSGCITKEEVASMLR-ALPDDCL-PVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDSS  509 (521)
Q Consensus       438 l~~~f~~~D~d~~G~I~~~e~~~~l~-~~~~~~~-~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~~~~  509 (521)
                      ++.+|+.||.|++|+|+.+||..++. .++.... .....+++++..+|+.+|.|+||.|+|+||..+|...|.
T Consensus       100 l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~p~  173 (179)
T 3a8r_A          100 LRTFFDMVDKNADGRLTAEEVKEIIALSASANKLSKIKERADEYTALIMEELDPTNLGYIEMEDLEALLLQSPS  173 (179)
T ss_dssp             HHHHHHHHCTTCSSCBCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHSTTCCSEECHHHHHHHHC----
T ss_pred             HHHHHHHHCCCCCCcCCHHHHHHHHHHHhccccccccccchHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhCcc
Confidence            99999999999999999999999997 5542100 000015568999999999999999999999999987554

>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A

Probab=99.76  E-value=1.5e-18  Score=165.33  Aligned_cols=142  Identities=17%  Similarity=0.341  Sum_probs=120.3

Q ss_pred             CCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHH----hcCC--CCCcchHHH----HHHHHcCCCCcceeHHHHHHH--
Q 009980          359 LNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLK----AMNM--SSLVPLAPR----IFDLFDNNRDGTVDMREILCG--  425 (521)
Q Consensus       359 ~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~----~~~~--~~~~~~~~~----~f~~~D~~~~g~I~~~ef~~~--  425 (521)
                      +++.+..+++.+|..+|.|++| |+.+||..+|+    .+|.  .++..++..    +|..+|.|++|.|+|+||+.+  
T Consensus         5 ~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~lg~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~   84 (272)
T 2be4_A            5 FANLDAAGFLQIWQHFDADDNGYIEGKELDDFFRHMLKKLQPKDKITDERVQQIKKSFMSAYDATFDGRLQIEELANMIL   84 (272)
T ss_dssp             CCCCCHHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHHSTTSCCCHHHHHHHHHHHSCHHHHTCCSEEEHHHHHHHHS
T ss_pred             HHhcCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEeHHHHHHHHh
Confidence            4555667899999999999999 99999999999    8888  777776655    558899999999999999998  


Q ss_pred             ---------HhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhC----CCCCCCCCCCChhHH----HHHHHHhc
Q 009980          426 ---------FSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRAL----PDDCLPVDITEPGKL----DEIFDLMD  488 (521)
Q Consensus       426 ---------~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~----~~~~~~~~~~~~~~~----~~~f~~~D  488 (521)
                               +.......+.++++.+|+.+|.|++|.|+.+||..++..+    +..      .+++++    ..+|+.+|
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~------~~~~~~~~~~~~~~~~~D  158 (272)
T 2be4_A           85 PQEENFLLIFRREAPLDNSVEFMKIWRKYDADSSGYISAAELKNFLKDLFLQHKKK------IPPNKLDEYTDAMMKIFD  158 (272)
T ss_dssp             CHHHHHHHHHHHHSCCCCHHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHTTCC------CCHHHHHHHHHHHHHHHC
T ss_pred             hhhHHHHHHHhhccCcccHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHHhcCCC------CCHHHHHHHHHHHHHHhc
Confidence                     3444456678889999999999999999999999999876    443      444454    45999999


Q ss_pred             CCCCcceeHHHHHHHHhc
Q 009980          489 ANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       489 ~~~dG~I~~~Ef~~~~~~  506 (521)
                      .|+||.|+++||..++..
T Consensus       159 ~~~dg~i~~~ef~~~~~~  176 (272)
T 2be4_A          159 KNKDGRLDLNDLARILAL  176 (272)
T ss_dssp             SSCSSEEEHHHHGGGSCC
T ss_pred             cCCCCcCcHHHHHHHHhh
Confidence            999999999999999865

>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A

Probab=99.75  E-value=2.4e-19  Score=160.56  Aligned_cols=140  Identities=13%  Similarity=0.220  Sum_probs=118.0

Q ss_pred             CCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhc------CCCCCcchHHHH---------HHHHcCCCCcceeHHHH
Q 009980          359 LNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAM------NMSSLVPLAPRI---------FDLFDNNRDGTVDMREI  422 (521)
Q Consensus       359 ~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~------~~~~~~~~~~~~---------f~~~D~~~~g~I~~~ef  422 (521)
                      ++++++.+++.+|..+|.|++| |+.+||..+++.+      |..++.+++..+         |+.+|.|++|.|+++| 
T Consensus         8 l~~~~~~~l~~~F~~~D~d~dG~i~~~El~~~l~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~f~~~D~d~dg~I~~~E-   86 (186)
T 2hps_A            8 ERAYHLRKMKTRMQRVDVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQEFLRVADQLGLAPGVRISVEEAAVNAT-   86 (186)
T ss_dssp             HHHHHHHHHHHHHHTTCTTCSSEEEHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHTCCTTCEEEHHHHHHHHH-
T ss_pred             ccHHHHHHHHHHhhhcCCCCCCccCHHHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHhcCCCCCCcccHHH-
Confidence            4678889999999999999999 9999999999876      777777778877         5999999999999999 


Q ss_pred             HHHHhhccCC-CcHHHHHHHh--HhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHH
Q 009980          423 LCGFSSLRKS-QGDDALRLCF--QMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDE  499 (521)
Q Consensus       423 ~~~~~~~~~~-~~~~~l~~~f--~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~E  499 (521)
                       .++...... ...+++..+|  +.||.|++|+|+.+||..++..++..      .+++++..+|+.+|.|+||+|+|+|
T Consensus        87 -~~~~~~~~~~~~~~~~~~~f~~~~fD~d~~G~I~~~E~~~~l~~~g~~------~~~~~~~~~~~~~D~d~dG~i~~~e  159 (186)
T 2hps_A           87 -DSLLKMKGEEKAMAVIQSLIMYDCIDTDKDGYVSLPEFKAFLQAVGPD------LTDDKAITCFNTLDFNKNGQISRDE  159 (186)
T ss_dssp             -HHHHHCCTHHHHHTTHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHCTT------CCHHHHHHHHHHHCTTCSSEEEHHH
T ss_pred             -HHHHHhcCChHHHHHHHHHHHHHHccCCCCCcCCHHHHHHHHHHhCCC------CCHHHHHHHHHHHcCCCCCcCcHHH
Confidence             455443322 1223555666  88899999999999999999987654      6778999999999999999999999


Q ss_pred             HHHHHhc
Q 009980          500 FRAAMQR  506 (521)
Q Consensus       500 f~~~~~~  506 (521)
                      |..++..
T Consensus       160 f~~~~~~  166 (186)
T 2hps_A          160 FLVTVND  166 (186)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999875

>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A

Probab=99.74  E-value=5.5e-18  Score=160.48  Aligned_cols=143  Identities=17%  Similarity=0.281  Sum_probs=119.9

Q ss_pred             HHHHHHHHHhhhcCCCC-CCHHHHHHHHHhc----CCCCCcchHHH----HHHHHcCCCCcceeHHHHHHHHhhc-----
Q 009980          364 IQNLRIHFRTICANGDN-ATLSEFEEVLKAM----NMSSLVPLAPR----IFDLFDNNRDGTVDMREILCGFSSL-----  429 (521)
Q Consensus       364 ~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~----~~~~~~~~~~~----~f~~~D~~~~g~I~~~ef~~~~~~~-----  429 (521)
                      ..+++.+|..+|.|++| |+.+||..++..+    |...+.+++..    +|+.+|.|++|.|+|+||+.++...     
T Consensus       102 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~~~~~  181 (263)
T 2f33_A          102 CEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLPVQENFLL  181 (263)
T ss_dssp             HHHHHHHHTTSSTTTCSSBCHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHTCSSSSSCBCHHHHHHHSCTTTCSHH
T ss_pred             HHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhcCCCCCCeEcHHHHHHHHHHHHHHHH
Confidence            34688999999999999 9999999999988    78877777766    9999999999999999999987641     


Q ss_pred             ---cCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHH-hcCCCCcceeHHHHHHHHh
Q 009980          430 ---RKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDL-MDANNDGKVTFDEFRAAMQ  505 (521)
Q Consensus       430 ---~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~-~D~~~dG~I~~~Ef~~~~~  505 (521)
                         ......+.++.+|+.+|.|++|+|+.+||..++..++....  ...+++++..+++. +|.|+||.|+|+||..+|.
T Consensus       182 ~~~~~~~~~~~~~~~F~~~D~d~~G~is~~El~~~l~~~~~~~~--~~~~~~e~~~~~~~~~D~d~dG~i~~~EF~~~~~  259 (263)
T 2f33_A          182 KFQGIKMCGKEFNKAFELYDQDGNGYIDENELDALLKDLCEKNK--QELDINNISTYKKNIMALSDGGKLYRTDLALILS  259 (263)
T ss_dssp             HHHHTCCCHHHHHHHHHHHCCSSSSCEEHHHHHHHHHHHHHHCT--TTCCTTTHHHHHHHHHTTSBTTEECGGGTHHHHC
T ss_pred             HhcCcchHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHhcC--CCCCHHHHHHHHHHhhccCCCCeEcHHHHHHHHh
Confidence               23456788999999999999999999999999987653100  01556688889987 7999999999999999998


Q ss_pred             cCc
Q 009980          506 RDS  508 (521)
Q Consensus       506 ~~~  508 (521)
                      ..+
T Consensus       260 ~~~  262 (263)
T 2f33_A          260 AGD  262 (263)
T ss_dssp             CSC
T ss_pred             ccC
Confidence            743

>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A

Probab=99.73  E-value=3.7e-18  Score=162.55  Aligned_cols=142  Identities=19%  Similarity=0.340  Sum_probs=116.3

Q ss_pred             HHHHHHHHhhhcCCCC-CCHHHHHHHHHhc----CCCCCcchHH----HHHHHHcCCCCcceeHHHHHHHHhhc------
Q 009980          365 QNLRIHFRTICANGDN-ATLSEFEEVLKAM----NMSSLVPLAP----RIFDLFDNNRDGTVDMREILCGFSSL------  429 (521)
Q Consensus       365 ~~l~~~F~~~D~~~~g-i~~~el~~~l~~~----~~~~~~~~~~----~~f~~~D~~~~g~I~~~ef~~~~~~~------  429 (521)
                      .+++.+|..+|.|++| |+.+||..++..+    |...+.+++.    .+|+.+|.|++|.|+++||+.++...      
T Consensus       104 ~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~~~~~~~~  183 (272)
T 2be4_A          104 VEFMKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKDGRLDLNDLARILALQENFLLQ  183 (272)
T ss_dssp             HHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEEEHHHHGGGSCCSSCSSTT
T ss_pred             HHHHHHHHHhCCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhccCCCCcCcHHHHHHHHhhhHHHHhh
Confidence            4578899999999999 9999999999987    7777666654    49999999999999999999887541      


Q ss_pred             ------cCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHH----HHHHhcCCCCcceeHHH
Q 009980          430 ------RKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDE----IFDLMDANNDGKVTFDE  499 (521)
Q Consensus       430 ------~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~----~f~~~D~~~dG~I~~~E  499 (521)
                            +.....+.+..+|+.+|.|++|+|+.+||..++..++....  ...+++++..    +|+.+|.|+||.|+|+|
T Consensus       184 ~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~D~d~dG~is~~E  261 (272)
T 2be4_A          184 FKMDASSQVERKRDFEKIFAHYDVSRTGALEGPEVDGFVKDMMELVR--PSISGGDLDKFRECLLTHCDMNKDGKIQKSE  261 (272)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHCTTCCSEEETHHHHHHHHHHHHHHS--SSCCHHHHHHHHHHHHHHHCCSTTCEEEHHH
T ss_pred             hhhhhccccccHHHHHHHHHHhCCCCCCeecHHHHHHHHHHHHHHcC--CCCCHHHHHHHHHHHHHHhCCCCCCcCcHHH
Confidence                  11134567999999999999999999999999976543000  0155667666    99999999999999999


Q ss_pred             HHHHHhcCc
Q 009980          500 FRAAMQRDS  508 (521)
Q Consensus       500 f~~~~~~~~  508 (521)
                      |..+|...|
T Consensus       262 F~~~~~~~p  270 (272)
T 2be4_A          262 LALCLGLKH  270 (272)
T ss_dssp             HHHHTTCCC
T ss_pred             HHHHHccCC
Confidence            999998765

>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A

Probab=99.73  E-value=9.7e-18  Score=162.99  Aligned_cols=131  Identities=23%  Similarity=0.369  Sum_probs=118.1

Q ss_pred             HHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHH-HHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHH
Q 009980          362 EEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPR-IFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALR  439 (521)
Q Consensus       362 ~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~-~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~  439 (521)
                      .....+..+|..+|.|++| |+.+||..++  +|...+..++.. +|..+|.|++|.|+|+||+.++....      .+.
T Consensus       185 ~~~~~l~~~F~~~D~d~dG~Is~~El~~~l--~g~~~~~~ei~~~l~~~~D~d~dG~Is~~EF~~~l~~~~------~l~  256 (323)
T 1ij5_A          185 NDLAALVADFRKIDTNSNGTLSRKEFREHF--VRLGFDKKSVQDALFRYADEDESDDVGFSEYVHLGLCLL------VLR  256 (323)
T ss_dssp             HHHHTSCCCHHHHCTTCCSEECHHHHHHHH--HHTTCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHH------HHH
T ss_pred             hHHHHHHHHHHHHCCCCCCcCcHHHHHHHH--cCCCCCHHHHHHHHHHHhcCCCCCEEeHHHHHHHHHHHH------HHH
Confidence            4456678889999999999 9999999999  788888889999 99999999999999999999987654      789


Q ss_pred             HHhHhhccCCCcceeHHHHHHHH-HhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          440 LCFQMYDIDRSGCITKEEVASML-RALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       440 ~~f~~~D~d~~G~I~~~e~~~~l-~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      .+|+.||.|++|+||.+||..++ ..++..      ++++++..+|..+|.|+||.|+|+||..+|..
T Consensus       257 ~~F~~~D~d~dG~Is~~El~~~l~~~~g~~------ls~~e~~~l~~~~D~d~dG~Is~~EF~~~~~~  318 (323)
T 1ij5_A          257 ILYAFADFDKSGQLSKEEVQKVLEDAHIPE------SARKKFEHQFSVVDVDDSKSLSYQEFVMLVLL  318 (323)
T ss_dssp             HHHHHTCSSSCSSEEHHHHHHHHHHTTCCG------GGCSTHHHHHHHHTTTTCSEECHHHHHHHHHH
T ss_pred             HHHHHhCCCCCCCccHHHHHHHHHHHcCCC------CCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHH
Confidence            99999999999999999999999 877654      55668999999999999999999999999875

>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L

Probab=99.69  E-value=9.3e-17  Score=172.17  Aligned_cols=135  Identities=18%  Similarity=0.310  Sum_probs=123.7

Q ss_pred             CCCHHH-HHHHHHHHHhhhcCCCC-CCHHHHHHHHHhc--------CCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHh
Q 009980          358 DLNEEE-IQNLRIHFRTICANGDN-ATLSEFEEVLKAM--------NMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFS  427 (521)
Q Consensus       358 ~~~~~~-~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~--------~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~  427 (521)
                      .+++++ +++++++|+.+| |++| |+.+||..+|+.+        +...+.+++..+|+.+|.|++|.|+|+||..++.
T Consensus       524 ~ls~~e~~~~l~~~F~~~D-d~dG~Is~~El~~~L~~l~~~~~~~~g~~~s~~~~~~l~~~~D~d~~G~I~f~EF~~l~~  602 (714)
T 3bow_A          524 EANEEDIGDGFRRLFAQLA-GEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYILWT  602 (714)
T ss_dssp             CCSGGGCCHHHHHHHHHHH-GGGTSBCHHHHHHHHHHHHTTCTTSCCSCCCHHHHHHHHHHHCCSSCSSBCHHHHHHHHH
T ss_pred             CCChhhHHHHHHHHHHHHc-CCCCcCCHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            367788 899999999999 9999 9999999999997        6777888999999999999999999999999887


Q ss_pred             hccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          428 SLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       428 ~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      .+      +.++.+|+.||.|++|+|+.+||..++..++..      .++++++.+|..+| |+||.|+|+||..+|..
T Consensus       603 ~~------~~l~~~F~~~D~d~dG~Is~~El~~~L~~~G~~------ls~~~~~~l~~~~D-d~dG~Isf~EF~~~l~~  668 (714)
T 3bow_A          603 KI------QKYQKIYREIDVDRSGTMNSYEMRKALEEAGFK------LPCQLHQVIVARFA-DDELIIDFDNFVRCLVR  668 (714)
T ss_dssp             HH------HHHHHHHHHHCTTCCSSEEHHHHHHHHHHTTEE------CCHHHHHHHHHHHS-CTTCEECHHHHHHHHHH
T ss_pred             HH------HHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCC------CCHHHHHHHHHHhC-CCCCeEcHHHHHHHHHH
Confidence            54      679999999999999999999999999988754      67789999999999 99999999999999875

>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A

Probab=99.69  E-value=1.2e-16  Score=145.67  Aligned_cols=125  Identities=13%  Similarity=0.183  Sum_probs=112.1

Q ss_pred             hhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCC-CCcceeHHHHHHHHhhccCC-CcHHHHHHHhHhhccCCC
Q 009980          374 ICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNN-RDGTVDMREILCGFSSLRKS-QGDDALRLCFQMYDIDRS  450 (521)
Q Consensus       374 ~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~-~~g~I~~~ef~~~~~~~~~~-~~~~~l~~~f~~~D~d~~  450 (521)
                      ++.+++| |+.+|+..+++.++.  +.+++.++|+.+|.+ ++|.|+++||..++..++.. .+...+..+|+.+|.|++
T Consensus         8 mg~~~~g~l~~~el~~~~~~~~~--~~~~i~~~f~~~d~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~~   85 (207)
T 2d8n_A            8 MGNSKSGALSKEILEELQLNTKF--SEEELCSWYQSFLKDCPTGRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLD   85 (207)
T ss_dssp             CTTCCTTCCCHHHHHHHHHHSSC--CHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHTCTTSCCHHHHHHHHHHHCTTCC
T ss_pred             hccccCCCCCHHHHHHHHHHcCC--CHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHhccCCCcHHHHHHHHHHhcCCCC
Confidence            7789999 999999999999874  678999999999999 79999999999999887654 677889999999999999


Q ss_pred             cceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          451 GCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       451 G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      |.|+++||..++..++..      ..++++..+|+.+|.|++|+|+++||..++..
T Consensus        86 G~i~~~Ef~~~~~~~~~~------~~~~~~~~~f~~~D~d~~G~I~~~E~~~~l~~  135 (207)
T 2d8n_A           86 GTLDFKEYVIALHMTTAG------KTNQKLEWAFSLYDVDGNGTISKNEVLEIVMA  135 (207)
T ss_dssp             SEEEHHHHHHHHHHHSCS------SSSTTHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred             CeEeHHHHHHHHHHHcCC------CHHHHHHHHHHHhcCCCCCeEcHHHHHHHHHH
Confidence            999999999999876543      34568999999999999999999999999876

>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A

Probab=99.67  E-value=1.2e-15  Score=134.52  Aligned_cols=127  Identities=19%  Similarity=0.321  Sum_probs=111.9

Q ss_pred             CCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHH
Q 009980          359 LNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDA  437 (521)
Q Consensus       359 ~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~  437 (521)
                      +++.+   +..+|..+|.|++| |+.+||..++...      ..+..+|+.+|.|++|.|+.+||..++...+...++++
T Consensus        41 ~~~~~---~~~l~~~~D~~~~g~i~~~ef~~~~~~~------~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~  111 (172)
T 2znd_A           41 FNPVT---VRSIISMFDRENKAGVNFSEFTGVWKYI------TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQF  111 (172)
T ss_dssp             CCHHH---HHHHHHHHCSSSSSEECHHHHHHHHHHH------HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHH
T ss_pred             CCHHH---HHHHHHHhCCCCCCcCCHHHHHHHHHHH------HHHHHHHHHHCCCCCCccCHHHHHHHHHHcCCCCCHHH
Confidence            45544   45668899999999 9999999988764      57899999999999999999999999998888888999


Q ss_pred             HHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCccee--HHHHHHHHhc
Q 009980          438 LRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVT--FDEFRAAMQR  506 (521)
Q Consensus       438 l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~--~~Ef~~~~~~  506 (521)
                      +..+|+.+|.|++|.|+++||..++...            +.+..+|+.+|.|+||.|+  ++||..++..
T Consensus       112 ~~~~~~~~d~~~dg~i~~~eF~~~~~~~------------~~~~~~F~~~D~d~dG~i~~~~~ef~~~~~~  170 (172)
T 2znd_A          112 HDILIRKFDRQGRGQIAFDDFIQGCIVL------------QRLTDIFRRYDTDQDGWIQVSYEQYLSMVFS  170 (172)
T ss_dssp             HHHHHHHHCTTCSSSEEHHHHHHHHHHH------------HHHHHHHHHHCTTSSSCCCCCHHHHHHHHHT
T ss_pred             HHHHHHHhCCCCCCcCcHHHHHHHHHHH------------HHHHHHHHHhCCCCCCeEeeeHHHHHHHHHh
Confidence            9999999999999999999999998753            3789999999999999996  7888887753

>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8

Probab=99.66  E-value=9.8e-16  Score=137.59  Aligned_cols=122  Identities=17%  Similarity=0.282  Sum_probs=110.5

Q ss_pred             HHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHh
Q 009980          366 NLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQM  444 (521)
Q Consensus       366 ~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~  444 (521)
                      .+..+|..+|.|++| |+.+||..++...      ..+..+|+.+|.|++|.|+.+||..++...+...+++++..+|+.
T Consensus        64 ~~~~l~~~~D~d~dG~I~~~EF~~~~~~~------~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~  137 (191)
T 1y1x_A           64 TTEKLLHMYDKNHSGEITFDEFKDLHHFI------LSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRK  137 (191)
T ss_dssp             HHHHHHHHHCTTCSSSBCHHHHHHHHHHH------HHHHHHHHHHCTTSSSCBCHHHHHHHHHTTSCCCCHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCeEcHHHHHHHHHHH------HHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence            456668999999999 9999999998764      578999999999999999999999999998888889999999999


Q ss_pred             hccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcc--eeHHHHHHHHh
Q 009980          445 YDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGK--VTFDEFRAAMQ  505 (521)
Q Consensus       445 ~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~--I~~~Ef~~~~~  505 (521)
                      +|.|++|.|+++||..++...            ..+..+|+.+|.|+||.  ++++||..++.
T Consensus       138 ~D~d~dg~i~~~eF~~~~~~~------------~~~~~~F~~~D~d~dG~i~~~~~eF~~~~~  188 (191)
T 1y1x_A          138 FDRQRRGSLGFDDYVELSIFV------------CRVRNVFAFYDRERTGQVTFTFDTFIGGSV  188 (191)
T ss_dssp             HCTTCSSSBCHHHHHHHHHHH------------HHHHHHHHHHCTTCCSEEEEEHHHHHHHHH
T ss_pred             hCCCCCCeEeHHHHHHHHHHH------------HHHHHHHHHhCcCCCceEEeeHHHHHHHHH
Confidence            999999999999999998752            37889999999999999  78999999875

>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A

Probab=99.66  E-value=3.4e-16  Score=126.76  Aligned_cols=103  Identities=17%  Similarity=0.291  Sum_probs=91.0

Q ss_pred             cCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhC---CCCC
Q 009980          393 MNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRAL---PDDC  469 (521)
Q Consensus       393 ~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~---~~~~  469 (521)
                      ++..++.+++.++|+.+|  ++|.|+|+||+.++..  .....+.++.+|+.||.|++|+|+.+||..++..+   +.. 
T Consensus         3 l~~~~~~~ei~~~~~~~D--~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~-   77 (109)
T 3fs7_A            3 ITDILSAKDIESALSSCQ--AADSFNYKSFFSTVGL--SSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARV-   77 (109)
T ss_dssp             GGGTSCHHHHHHHHHHTC--STTCCCHHHHHHHHTC--TTCCHHHHHHHHHHHSTTCSSSBCHHHHHTTGGGTCTTSCC-
T ss_pred             ccCcCCHHHHHHHHHhcC--CCCcCcHHHHHHHHhc--CCCcHHHHHHHHHHHCCCCCCeEeHHHHHHHHHHHhccccc-
Confidence            466677889999999998  7999999999998865  33567889999999999999999999999999887   333 


Q ss_pred             CCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHh
Q 009980          470 LPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQ  505 (521)
Q Consensus       470 ~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~  505 (521)
                           .++++++.+|+.+|.|+||.|+|+||..+|+
T Consensus        78 -----~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~  108 (109)
T 3fs7_A           78 -----LTSAETKAFLAAGDTDGDGKIGVEEFQSLVK  108 (109)
T ss_dssp             -----CCHHHHHHHHHHHCTTCSSSBCHHHHHHHHT
T ss_pred             -----CCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence                 6778999999999999999999999999886

>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4

Probab=99.65  E-value=8e-16  Score=124.59  Aligned_cols=104  Identities=15%  Similarity=0.276  Sum_probs=91.7

Q ss_pred             hcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhC---CCC
Q 009980          392 AMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRAL---PDD  468 (521)
Q Consensus       392 ~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~---~~~  468 (521)
                      ++|..++.+++.++|+.+|  ++|.|+|+||+.++...  ....+.++.+|+.||.|++|+|+.+||..++..+   +..
T Consensus         2 slg~~~~~~e~~~~~~~~d--~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~   77 (109)
T 1bu3_A            2 AFSGILADADVAAALKACE--AADSFNYKAFFAKVGLT--AKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARA   77 (109)
T ss_dssp             CCSCSSCHHHHHHHHHHTC--STTCCCHHHHHHHHTGG--GSCHHHHHHHHHHHCTTCSSSEEHHHHHTHHHHHSTTCCC
T ss_pred             cccccCCHHHHHHHHHHhC--CCCcCcHHHHHHHHHcC--hhhHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCC
Confidence            4678888899999999998  89999999999987532  3456789999999999999999999999999987   333


Q ss_pred             CCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHh
Q 009980          469 CLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQ  505 (521)
Q Consensus       469 ~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~  505 (521)
                            .+++++..+|+.+|.|+||.|+|+||..++.
T Consensus        78 ------~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~  108 (109)
T 1bu3_A           78 ------LTDAETKAFLKAGDSDGDGAIGVDEWAALVK  108 (109)
T ss_dssp             ------CCHHHHHHHHHHHCTTCSSEECHHHHHHHHT
T ss_pred             ------CCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence                  6778999999999999999999999999875

>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4

Probab=99.64  E-value=8.5e-16  Score=124.42  Aligned_cols=104  Identities=23%  Similarity=0.383  Sum_probs=90.5

Q ss_pred             cCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhC---CCCC
Q 009980          393 MNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRAL---PDDC  469 (521)
Q Consensus       393 ~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~---~~~~  469 (521)
                      ++..++.+++.++|+.+|.  +|.|+|+||+.++..  .....++++.+|+.||.|++|+|+.+||..++..+   +.. 
T Consensus         2 l~~~~s~~ei~~~~~~~d~--~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~g~~-   76 (109)
T 5pal_A            2 MTKVLKADDINKAISAFKD--PGTFDYKRFFHLVGL--KGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRD-   76 (109)
T ss_dssp             GGGTSCHHHHHHHHHHTCS--TTCCCHHHHHHHHTC--TTCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCC-
T ss_pred             CCCcCCHHHHHHHHHHhCC--CCcCcHHHHHHHHhh--ccCcHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHHHcCCC-
Confidence            3455677889999999987  899999999998864  23467889999999999999999999999999987   443 


Q ss_pred             CCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          470 LPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       470 ~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                           .+++++..+|+.+|.|+||.|+|+||..+|+.
T Consensus        77 -----~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~  108 (109)
T 5pal_A           77 -----LNDTETKALLAAGDSDHDGKIGADEFAKMVAQ  108 (109)
T ss_dssp             -----CCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred             -----CCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence                 67789999999999999999999999999864

>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A

Probab=99.64  E-value=7.2e-16  Score=124.64  Aligned_cols=103  Identities=17%  Similarity=0.252  Sum_probs=90.6

Q ss_pred             hcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhC---CCC
Q 009980          392 AMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRAL---PDD  468 (521)
Q Consensus       392 ~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~---~~~  468 (521)
                      ++|. ++.+++..+|+.+|  ++|.|+|+||+.++...  ....+.++.+|+.||.|++|+|+.+||..++..+   +..
T Consensus         2 slG~-~~~~e~~~l~~~~d--~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~   76 (108)
T 2pvb_A            2 SFAG-LKDADVAAALAACS--AADSFKHKEFFAKVGLA--SKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARA   76 (108)
T ss_dssp             CCTT-SCHHHHHHHHHHTC--STTCCCHHHHHHHHTGG--GSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCC
T ss_pred             CcCC-CCHHHHHHHHHHhC--CCCcCcHHHHHHHHhCC--hhHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccCCC
Confidence            4677 88889999999998  78999999999987532  3456789999999999999999999999999887   332


Q ss_pred             CCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHh
Q 009980          469 CLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQ  505 (521)
Q Consensus       469 ~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~  505 (521)
                            .+++++..+|+.+|.|+||.|+|+||..++.
T Consensus        77 ------~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~  107 (108)
T 2pvb_A           77 ------LTDAETKAFLADGDKDGDGMIGVDEFAAMIK  107 (108)
T ss_dssp             ------CCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             ------CCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence                  6778999999999999999999999999875

>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}

Probab=99.64  E-value=2e-15  Score=135.40  Aligned_cols=135  Identities=15%  Similarity=0.252  Sum_probs=114.6

Q ss_pred             CCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCC-CCcceeHHHHHHHHhhccCC-CcHHHHHHHhHhhccCCCccee
Q 009980          378 GDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNN-RDGTVDMREILCGFSSLRKS-QGDDALRLCFQMYDIDRSGCIT  454 (521)
Q Consensus       378 ~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~-~~g~I~~~ef~~~~~~~~~~-~~~~~l~~~f~~~D~d~~G~I~  454 (521)
                      ..| ++.+++..+.+.++.  +..++.++|+.+|.| ++|.|+++||..++..++.. .+...+..+|+.+|.|++|.|+
T Consensus         4 ~~~~l~~~el~~~~~~~~~--~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~   81 (190)
T 2l2e_A            4 SQSKLSQDQLQDLVRSTRF--DKKELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYID   81 (190)
T ss_dssp             SSCCSCHHHHHHHHHHHCS--CSHHHHHHHHHHHHHSCCCEECHHHHHHHHHHHCCCSCHHHHHHHHHHHHCSSSTTCEE
T ss_pred             ccccCCHHHHHHHHHhcCC--CHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCCccHHHHHHHHHhcCCCCCeEe
Confidence            446 999999999888754  578999999999999 89999999999999887543 5677899999999999999999


Q ss_pred             HHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc-------------CccHHHHHHHhhhh
Q 009980          455 KEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR-------------DSSLQDVVLSSLRQ  520 (521)
Q Consensus       455 ~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~-------------~~~~~~~~~~~~~~  520 (521)
                      .+||..++...+..      .+++++..+|+.+|.|++|+|+++||..++..             .+..++++++.+++
T Consensus        82 ~~ef~~~~~~~~~~------~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~  154 (190)
T 2l2e_A           82 FKEFICALSVTSRG------ELNDKLIWAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFN  154 (190)
T ss_dssp             HHHHHHHHTTSSCS------CSHHHHHHHHHHHCTTSCSCBCHHHHHHHHHHHHHHHHHHSCCCSSCCCTHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCC------CHHHHHHHHHhHccCCCCCcCcHHHHHHHHHHHHHHhccccCcccccccHHHHHHHHHH
Confidence            99999999876543      45678999999999999999999999999875             23456677777664

>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}

Probab=99.64  E-value=1.8e-15  Score=133.25  Aligned_cols=125  Identities=14%  Similarity=0.175  Sum_probs=108.7

Q ss_pred             CCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhc----cCC
Q 009980          358 DLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSL----RKS  432 (521)
Q Consensus       358 ~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~----~~~  432 (521)
                      .++++   ++..+|..+|.|++| |+.+||..++...      ..+..+|+.+| |++|.|+.+||..++..+    +..
T Consensus        42 ~~~~~---~~~~l~~~~D~d~~G~I~f~EF~~~~~~~------~~l~~aF~~fD-d~~G~I~~~El~~~l~~l~~~~G~~  111 (174)
T 2i7a_A           42 MFSLD---ECRSLVALMELKVNGRLDQEEFARLWKRL------VHYQHVFQKVQ-TSPGVLLSSDLWKAIENTDFLRGIF  111 (174)
T ss_dssp             CCCHH---HHHHHHHHHCSSCSSEECHHHHHHHHHHH------HHHHHHHHHHC-SBTTBEEGGGHHHHHHTCGGGTTCC
T ss_pred             CCCHH---HHHHHHHHHCCCCCCcCCHHHHHHHHHHH------HHHHHHHHHhc-CCCCcCCHHHHHHHHHHhHhccCCC
Confidence            34544   456678899999999 9999999888754      57899999999 999999999999999988    777


Q ss_pred             CcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCc-ceeHHHHHHHHh
Q 009980          433 QGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDG-KVTFDEFRAAMQ  505 (521)
Q Consensus       433 ~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG-~I~~~Ef~~~~~  505 (521)
                      .+++++..+++.+| |++|.|+++||..++...            +.+..+|+.+|+|++| .++++||..++.
T Consensus       112 ~~~~~~~~l~~~~d-d~dG~I~~~EF~~~~~~~------------~~~~~~F~~~D~d~~GI~~~~~Ef~~~~~  172 (174)
T 2i7a_A          112 ISRELLHLVTLRYS-DSVGRVSFPSLVCFLMRL------------EAMAKTFRNLSKDGKGLYLTEMEWMSLVM  172 (174)
T ss_dssp             CCHHHHHHHHHHHS-CTTSEECHHHHHHHHHHH------------HHHHHHHHHHCSSSSCCCCCHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHc-CCCCeEcHHHHHHHHHHH------------HHHHHHHHHhCCCCCCceecHHHHHHHHH
Confidence            88999999999999 999999999999988752            3688999999999999 449999998754

>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A

Probab=99.62  E-value=9.9e-16  Score=124.02  Aligned_cols=103  Identities=18%  Similarity=0.328  Sum_probs=89.1

Q ss_pred             CCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhC---CCCCC
Q 009980          394 NMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRAL---PDDCL  470 (521)
Q Consensus       394 ~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~---~~~~~  470 (521)
                      |..++.+++.++|+.+|  ++|.|+|+||+.++...  ....+.++.+|+.+|.|++|+|+.+||..++..+   +..  
T Consensus         3 g~~~t~~e~~~~~~~~d--~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~--   76 (109)
T 1rwy_A            3 TDLLSAEDIKKAIGAFT--AADSFDHKKFFQMVGLK--KKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARD--   76 (109)
T ss_dssp             HHHSCHHHHHHHHHTTC--STTCCCHHHHHHHHTGG--GSCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCC--
T ss_pred             CCcCCHHHHHHHHHHcC--CCCcEeHHHHHHHHhcC--cchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHhccCCC--
Confidence            44567788899999998  89999999999987532  3456789999999999999999999999999987   332  


Q ss_pred             CCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          471 PVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       471 ~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                          .++++++.+|+.+|.|+||.|+|+||..++..
T Consensus        77 ----~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~  108 (109)
T 1rwy_A           77 ----LSAKETKTLMAAGDKDGDGKIGVEEFSTLVAE  108 (109)
T ss_dssp             ----CCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHT
T ss_pred             ----CCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHc
Confidence                56789999999999999999999999998864

>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A

Probab=99.62  E-value=2.2e-15  Score=129.32  Aligned_cols=115  Identities=17%  Similarity=0.264  Sum_probs=104.3

Q ss_pred             hHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHH
Q 009980          401 LAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKL  480 (521)
Q Consensus       401 ~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~  480 (521)
                      +++++|+.+|.|++|.|+++||..++...+..+++.++..+|..+|.+++|.|+..||...+......     ...++++
T Consensus        11 el~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~-----~~~~~~l   85 (148)
T 2lmt_A           11 EFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCGIMAKQMRE-----TDTEEEM   85 (148)
T ss_dssp             HHHHHHHHHHCSSCCEEEGGGHHHHHHHHTCCCCHHHHHHHHHHHHTTSTTEEEHHHHHHHHHHTTTT-----TTTHHHH
T ss_pred             HHHHHHHHHcCCCCCeECHHHHHHHHHhcCCCchHHHHHHHHHhcccCCCCcccHHHHHHHHHHHhcc-----cCcHHHH
Confidence            56789999999999999999999999999999999999999999999999999999999988765433     2456789


Q ss_pred             HHHHHHhcCCCCcceeHHHHHHHHhc-CccHHHHHHHhhhh
Q 009980          481 DEIFDLMDANNDGKVTFDEFRAAMQR-DSSLQDVVLSSLRQ  520 (521)
Q Consensus       481 ~~~f~~~D~~~dG~I~~~Ef~~~~~~-~~~~~~~~~~~~~~  520 (521)
                      ..+|+.+|.|++|+|+.+||..++.. +..+++.+++.|++
T Consensus        86 ~~aF~~~D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~  126 (148)
T 2lmt_A           86 REAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIR  126 (148)
T ss_dssp             HHHHHHHHSSCSSEECHHHHHHHHHHHTCCCCHHHHHHHHH
T ss_pred             HHHHHHHCCCCcCcCcHHHHHHHHHHcCccccHHHHHHHHH
Confidence            99999999999999999999999998 89999999998875

>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A

Probab=99.62  E-value=9.1e-16  Score=124.46  Aligned_cols=108  Identities=19%  Similarity=0.318  Sum_probs=91.1

Q ss_pred             hcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCC
Q 009980          392 AMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLP  471 (521)
Q Consensus       392 ~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~  471 (521)
                      ++|..++..++.++|+.+|  ++|.|+|+||+.++..  .....+.++.+|+.+|.|++|+|+.+||..++..++...  
T Consensus         2 alG~~~t~~e~~~~~~~~d--~~g~i~~~ef~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g--   75 (110)
T 1pva_A            2 AAKDLLKADDIKKALDAVK--AEGSFNHKKFFALVGL--KAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADG--   75 (110)
T ss_dssp             CHHHHSCHHHHHHHHHHTC--STTCCCHHHHHHHHTC--TTSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTC--
T ss_pred             cccccCCHHHHHHHHHhcC--CCCcCcHHHHHHHHcc--CcchHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhhcC--
Confidence            4566777889999999998  8899999999998743  234567899999999999999999999999998873100  


Q ss_pred             CCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          472 VDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       472 ~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                       ...+++++..+|+.+|.|+||.|+|+||..++..
T Consensus        76 -~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  109 (110)
T 1pva_A           76 -RDLTDAETKAFLKAADKDGDGKIGIDEFETLVHE  109 (110)
T ss_dssp             -CCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred             -CCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHh
Confidence             1256789999999999999999999999998864

>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A

Probab=99.62  E-value=3.1e-16  Score=164.27  Aligned_cols=132  Identities=17%  Similarity=0.240  Sum_probs=65.8

Q ss_pred             HHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHh
Q 009980          366 NLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQM  444 (521)
Q Consensus       366 ~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~  444 (521)
                      .++++|+.+|.|++| |+.+||..+|+.+|...+.+++.++|+.+|.|++|.|+|+||+.++..+..   +++++.+|+.
T Consensus        12 ~l~~~F~~fD~d~dG~Is~~El~~~l~~lg~~~s~~el~~lf~~~D~d~~G~I~f~EF~~~~~~l~~---~~el~~aF~~   88 (624)
T 1djx_A           12 WIHSCLRKADKNKDNKMNFKELKDFLKELNIQVDDGYARKIFRECDHSQTDSLEDEEIETFYKMLTQ---RAEIDRAFEE   88 (624)
T ss_dssp             --------------------------------------------------------CTTHHHHHHTC---CHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHhcc---HHHHHHHHHH
Confidence            578999999999999 999999999999999888899999999999999999999999999876543   4679999999


Q ss_pred             hccCCCcceeHHHHHHHHHhC-CCCCCCCCCCChhHHHHHHHHhcCC----CCcceeHHHHHHHHhc
Q 009980          445 YDIDRSGCITKEEVASMLRAL-PDDCLPVDITEPGKLDEIFDLMDAN----NDGKVTFDEFRAAMQR  506 (521)
Q Consensus       445 ~D~d~~G~I~~~e~~~~l~~~-~~~~~~~~~~~~~~~~~~f~~~D~~----~dG~I~~~Ef~~~~~~  506 (521)
                      ||.+ +|+|+.+||+.++... +..     ..++++++.+++.+|.|    ++|.|+|+||..+|..
T Consensus        89 fD~~-~G~Is~~EL~~fL~~~qge~-----~ls~ee~~~ii~~~d~d~~~~~dG~Is~deF~~~L~s  149 (624)
T 1djx_A           89 AAGS-AETLSVERLVTFLQHQQREE-----EAGPALALSLIERYEPSETAKAQRQMTKDGFLMYLLS  149 (624)
T ss_dssp             HHTT-SSSEEHHHHHHHHHHTSCCS-----SCSHHHHHHHHHHHCCCHHHHHTTEECHHHHHHHHHS
T ss_pred             hcCC-CCeecHHHHHHHHHHHhCCC-----CCCHHHHHHHHHHhCCChhhccCCCCCHHHHHHHhcC
Confidence            9986 9999999999999865 332     15678999999999998    7999999999999986

>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}

Probab=99.62  E-value=1.8e-15  Score=146.89  Aligned_cols=115  Identities=23%  Similarity=0.354  Sum_probs=102.2

Q ss_pred             hHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHH
Q 009980          401 LAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKL  480 (521)
Q Consensus       401 ~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~  480 (521)
                      +++++|+.+|.|++|.|+.+||..++..++...+++++..+|+.+|.|++|.|+++||..++......     ...++++
T Consensus       303 ELREaF~~fDkDgdG~IS~eELk~aLrsLG~~~TeeEI~~Lf~~~D~DgDG~IdFeEFl~lms~~lk~-----~d~eeeL  377 (440)
T 3u0k_A          303 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLIMMARKMKD-----TDSEEEI  377 (440)
T ss_dssp             HHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCSSSEEHHHHHHHHHTC-----------CHHH
T ss_pred             HHHHHHHHHcCCCCCEECHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcC-----CChHHHH
Confidence            56789999999999999999999999999999999999999999999999999999999988764322     1345689


Q ss_pred             HHHHHHhcCCCCcceeHHHHHHHHhc-CccHHHHHHHhhhh
Q 009980          481 DEIFDLMDANNDGKVTFDEFRAAMQR-DSSLQDVVLSSLRQ  520 (521)
Q Consensus       481 ~~~f~~~D~~~dG~I~~~Ef~~~~~~-~~~~~~~~~~~~~~  520 (521)
                      ..+|+.+|.|++|+|+.+||++++.. +..+++++++.|++
T Consensus       378 reAFk~fDkDgdG~IS~eELr~vL~~lGe~LSdeEIdeLfk  418 (440)
T 3u0k_A          378 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR  418 (440)
T ss_dssp             HHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHH
T ss_pred             HHHHHHHCCCCcCcCCHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence            99999999999999999999999998 88999999999885

>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}

Probab=99.61  E-value=3.5e-16  Score=131.90  Aligned_cols=101  Identities=15%  Similarity=0.079  Sum_probs=66.4

Q ss_pred             chHHHHHHHHcCCCCcceeHHHHHHHHhhcc-CCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCC-CCCCCCCCCh
Q 009980          400 PLAPRIFDLFDNNRDGTVDMREILCGFSSLR-KSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPD-DCLPVDITEP  477 (521)
Q Consensus       400 ~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~-~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~-~~~~~~~~~~  477 (521)
                      +..+++|+.+|.|++|.|+|+||+.++.... .....+.++.+|+.||+|++|+|+.+||..++..++. .      .++
T Consensus         3 p~~~~l~~~~D~d~~G~I~~~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~------~~~   76 (135)
T 3h4s_E            3 PTEKSMLLETTSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEG------MSK   76 (135)
T ss_dssp             ----------------CCCC-----------CHHHHHHHHHHHHHHHSBTTTTBBCHHHHHHHGGGGTCCC------CCH
T ss_pred             hhHHHHHHHHcCCCCCcEeHHHHHHHHHHHccccchHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCC------CCH
Confidence            4567899999999999999999999887532 2234578999999999999999999999999998873 4      677


Q ss_pred             hHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          478 GKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       478 ~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      ++++.+|+.+|.|+||.|+|+||+.+|..
T Consensus        77 ~e~~~~~~~~D~d~dG~I~~~EF~~~~~~  105 (135)
T 3h4s_E           77 EDAQGMVREGDLDGDGALNQTEFCVLMVR  105 (135)
T ss_dssp             HHHHHHHHHHCSSCSSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence            89999999999999999999999999987

>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}

Probab=99.61  E-value=1.1e-15  Score=135.23  Aligned_cols=116  Identities=20%  Similarity=0.309  Sum_probs=104.3

Q ss_pred             chHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhH
Q 009980          400 PLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGK  479 (521)
Q Consensus       400 ~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~  479 (521)
                      .+++++|..+|.|++|.|+++||..++..++..+++.++..++..+|.|++|.|+++||..++......     ..++++
T Consensus        11 ~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~~~~d~d~~~~i~~~ef~~~~~~~~~~-----~~~~~~   85 (176)
T 2lhi_A           11 AEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKS-----NDSEQE   85 (176)
T ss_dssp             GHHHHHHHTTCSSCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTTCSSCSSSBCTTHHHHHHTSSCCS-----SHHHHH
T ss_pred             HHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCChhHHHHHHHHHHhCcCCCccchHHHHHHHHHHhccc-----CCcHHH
Confidence            367889999999999999999999999999999999999999999999999999999999988654322     124567


Q ss_pred             HHHHHHHhcCCCCcceeHHHHHHHHhc-CccHHHHHHHhhhh
Q 009980          480 LDEIFDLMDANNDGKVTFDEFRAAMQR-DSSLQDVVLSSLRQ  520 (521)
Q Consensus       480 ~~~~f~~~D~~~dG~I~~~Ef~~~~~~-~~~~~~~~~~~~~~  520 (521)
                      +..+|+.+|+|++|+|+.+||..++.. +..+++++++.|++
T Consensus        86 l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~~~~~ei~~l~~  127 (176)
T 2lhi_A           86 LLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLR  127 (176)
T ss_dssp             HHHHHHHHCSSCSSSBCHHHHHHHHHTTTCCCCHHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCcCcHHHHHHHHHHcCcccchHHHHHHHH
Confidence            999999999999999999999999998 88999999999886

>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A

Probab=99.61  E-value=5.5e-16  Score=132.25  Aligned_cols=116  Identities=18%  Similarity=0.364  Sum_probs=101.5

Q ss_pred             chHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhH
Q 009980          400 PLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGK  479 (521)
Q Consensus       400 ~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~  479 (521)
                      .+++++|..+|.|++|.|+.+||..++..++..+++.++..+|+.+|.|++|.|+++||..++......     ..+.++
T Consensus         6 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~-----~~~~~~   80 (143)
T 2obh_A            6 QEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSE-----KDTKEE   80 (143)
T ss_dssp             HHHHHHHHTTCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHH-----HHHHHH
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeeeHHHHHHHHHHHhcc-----ccHHHH
Confidence            357889999999999999999999999999988899999999999999999999999999887642110     012357


Q ss_pred             HHHHHHHhcCCCCcceeHHHHHHHHhc-CccHHHHHHHhhhh
Q 009980          480 LDEIFDLMDANNDGKVTFDEFRAAMQR-DSSLQDVVLSSLRQ  520 (521)
Q Consensus       480 ~~~~f~~~D~~~dG~I~~~Ef~~~~~~-~~~~~~~~~~~~~~  520 (521)
                      +..+|+.+|+|++|+|+.+||..++.. +..+++++++.|++
T Consensus        81 l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~  122 (143)
T 2obh_A           81 ILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMID  122 (143)
T ss_dssp             HHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence            899999999999999999999999988 78899999998875

>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A

Probab=99.61  E-value=2e-15  Score=121.95  Aligned_cols=106  Identities=16%  Similarity=0.237  Sum_probs=89.4

Q ss_pred             cCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCC
Q 009980          393 MNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPV  472 (521)
Q Consensus       393 ~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~  472 (521)
                      ++..++.+++.++|+.+|  ++|.|+|+||+.++...  ....+.++.+|+.||.|++|+|+.+||..++..++..   .
T Consensus         2 l~~~~t~~e~~~~~~~~d--~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~---g   74 (108)
T 1rro_A            2 ITDILSAEDIAAALQECQ--DPDTFEPQKFFQTSGLS--KMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSD---A   74 (108)
T ss_dssp             GGGTSCHHHHHHHHHHTC--STTCCCHHHHHHHHSGG--GSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTT---S
T ss_pred             ccccCCHHHHHHHHHHcc--CCCCcCHHHHHHHHhcC--cccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhc---c
Confidence            455677788999999998  89999999999987532  3456789999999999999999999999999887410   0


Q ss_pred             CCCChhHHHHHHHHhcCCCCcceeHHHHHHHHh
Q 009980          473 DITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQ  505 (521)
Q Consensus       473 ~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~  505 (521)
                      ...+++++..+|+.+|.|+||.|+|+||..+|.
T Consensus        75 ~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~  107 (108)
T 1rro_A           75 RELTESETKSLMDAADNDGDGKIGADEFQEMVH  107 (108)
T ss_dssp             CCCCHHHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred             CCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHc
Confidence            125678999999999999999999999999875

>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1

Probab=99.60  E-value=1.1e-15  Score=169.10  Aligned_cols=139  Identities=19%  Similarity=0.292  Sum_probs=124.4

Q ss_pred             CCCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhcc-CCCc
Q 009980          357 HDLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLR-KSQG  434 (521)
Q Consensus       357 ~~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~-~~~~  434 (521)
                      ..+++.++..++.+|+.+|.|++| |+.+||..+|+.+|...+.+++..+|..+|.|+||.|+|+||+.++.... ....
T Consensus       717 ~~l~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~  796 (863)
T 1sjj_A          717 KGISQEQMNEFRASFNHFDRKKTGMMDCEDFRACLISMGYNMGEAEFARIMSIVDPNRMGVVTFQAFIDFMSRETADTDT  796 (863)
T ss_dssp             CCSSHHHHHHHHHHHTTTCSSSSSEEESTTHHHHHHHHTCCCCTHHHHHHHHHHCTTSCSEEETTHHHHTHHHHSTTCSS
T ss_pred             cCCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCCC
Confidence            456788899999999999999999 99999999999999998889999999999999999999999999887643 3445


Q ss_pred             HHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCC-----CCcceeHHHHHHHHhcCcc
Q 009980          435 DDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDAN-----NDGKVTFDEFRAAMQRDSS  509 (521)
Q Consensus       435 ~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~-----~dG~I~~~Ef~~~~~~~~~  509 (521)
                      .+.+..+|+.| .|++|+|+.+||..++.             +++++.+|..+|.+     +||.|+|+||..+|...+.
T Consensus       797 ~~~l~~aF~~~-~d~~G~Is~~El~~~l~-------------~~~~~~l~~~~d~~~~~~~~dg~I~~~eF~~~~~~~~~  862 (863)
T 1sjj_A          797 ADQVMASFKIL-AGDKNYITVDELRRELP-------------PDQAEYCIARMAPYNGRDAVPGALDYMSFSTALYGESD  862 (863)
T ss_dssp             SHHHHHHHHGG-GTSSSEEEHHHHHHHSC-------------HHHHHHHHHHSEECCSSCCCTTEEESHHHHHHHSCCSC
T ss_pred             HHHHHHHHHHH-hCCCCcCcHHHHHHHCC-------------HHHHHHHHHHcchhcCCCCCCCceeHHHHHHHHhcCCC
Confidence            67899999999 89999999999999862             45899999999987     7999999999999987664

>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=99.60  E-value=6.5e-15  Score=125.21  Aligned_cols=116  Identities=18%  Similarity=0.228  Sum_probs=103.0

Q ss_pred             chHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhH
Q 009980          400 PLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGK  479 (521)
Q Consensus       400 ~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~  479 (521)
                      ..+.++|..+|.|++|.|+.+||..++..++...+..++..+|+.+|.|++|.|+++||..++......     ....+.
T Consensus         6 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~-----~~~~~~   80 (142)
T 2bl0_C            6 SEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFLSMMGRRMKQ-----TTSEDI   80 (142)
T ss_dssp             HHHHHHHHHHCTTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHTT-----CCCHHH
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCcCCCCeeeHHHHHHHHHHHhcC-----CChHHH
Confidence            357889999999999999999999999998888889999999999999999999999999998752211     135568


Q ss_pred             HHHHHHHhcCCCCcceeHHHHHHHHhc-CccHHHHHHHhhhh
Q 009980          480 LDEIFDLMDANNDGKVTFDEFRAAMQR-DSSLQDVVLSSLRQ  520 (521)
Q Consensus       480 ~~~~f~~~D~~~dG~I~~~Ef~~~~~~-~~~~~~~~~~~~~~  520 (521)
                      +..+|+.+|.|++|.|+.+||..++.. +..+++++++.+++
T Consensus        81 ~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~  122 (142)
T 2bl0_C           81 LRQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAEFLG  122 (142)
T ss_dssp             HHHHHHHTCCSSCSCEEHHHHHHHHHHSSSCCCHHHHHHHHH
T ss_pred             HHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHH
Confidence            999999999999999999999999988 77899999988875

>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A

Probab=99.60  E-value=4.5e-15  Score=136.29  Aligned_cols=122  Identities=16%  Similarity=0.184  Sum_probs=108.3

Q ss_pred             HHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHh
Q 009980          366 NLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQM  444 (521)
Q Consensus       366 ~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~  444 (521)
                      .+..+|..+|.|++| |+.+||..++..+      ..+..+|+.+|.|++|.|+.+||..++..++...+++++..+|+.
T Consensus        88 ~~~~l~~~~D~d~dg~I~~~EF~~~~~~~------~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~  161 (220)
T 3sjs_A           88 TALRMMRIFDTDFNGHISFYEFMAMYKFM------ELAYNLFVMNARARSGTLEPHEILPALQQLGFYINQRTSLLLHRL  161 (220)
T ss_dssp             HHHHHHHHHCTTCSSCBCHHHHHHHHHHH------HHHHHHHHHHCCSSTTEECHHHHHHHHHHHTCCCCHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCcCCHHHHHHHHHHH------HHHHHHHHHHCCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence            356678899999999 9999999998875      578999999999999999999999999998888899999999999


Q ss_pred             hccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHh-cCCCCc------ceeHHHHHHHHhc
Q 009980          445 YDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLM-DANNDG------KVTFDEFRAAMQR  506 (521)
Q Consensus       445 ~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~-D~~~dG------~I~~~Ef~~~~~~  506 (521)
                      +| |++|.|+++||..++..+            ..+..+|+.+ |++++|      .|+++||..++..
T Consensus       162 ~d-d~dg~I~~~eF~~~~~~l------------~~~~~~F~~~~D~~~~G~i~~~~~i~~~ef~~~~~~  217 (220)
T 3sjs_A          162 FA-RGMAFCDLNCWIAICAFA------------AQTRSAYQMIFMNPYYGPMKPFNPMEFGKFLDVVTS  217 (220)
T ss_dssp             HC---CCSEEHHHHHHHHHHH------------HHHHHHHHHHHTSGGGCSCCCCCHHHHHHHHHHHHH
T ss_pred             hc-CCCCcCcHHHHHHHHHHH------------HHHHHHHHHhcccCCCCCcccccceeHHHHHHHHHH
Confidence            99 999999999999998763            1578999999 999999      8999999998764

>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A

Probab=99.58  E-value=6.4e-15  Score=129.96  Aligned_cols=120  Identities=18%  Similarity=0.306  Sum_probs=106.8

Q ss_pred             HHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHh
Q 009980          366 NLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQM  444 (521)
Q Consensus       366 ~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~  444 (521)
                      .+..+|..+|.|++| |+.+||..++...      ..+..+|+.+|.|++|.|+.+||..++..++...+++++..+|+.
T Consensus        48 ~~~~l~~~~D~~~~g~i~~~eF~~~~~~~------~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~  121 (173)
T 1alv_A           48 TCRSMVAVMDSDTTGKLGFEEFKYLWNNI------KKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIRR  121 (173)
T ss_dssp             HHHHHHHHHCTTCSSSBCHHHHHHHHHHH------HHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCCCccCHHHHHHHHHHH------HHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCCCCHHHHHHHHHH
Confidence            456678899999999 9999999988763      578999999999999999999999999998888889999999999


Q ss_pred             hccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHh
Q 009980          445 YDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQ  505 (521)
Q Consensus       445 ~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~  505 (521)
                      +| |++|.|+++||..++...            +.+..+|+.+|+|++|+|+.+ |.+++.
T Consensus       122 ~d-d~dg~i~~~eF~~~~~~~------------~~~~~~F~~~D~d~~G~i~~~-~~~~l~  168 (173)
T 1alv_A          122 YS-DEGGNMDFDNFISCLVRL------------DAMFRAFKSLDKDGTGQIQVN-IQEWLQ  168 (173)
T ss_dssp             HT-CSSSCBCHHHHHHHHHHH------------HHHHHHHHHHSSSCCSEEEEE-HHHHHH
T ss_pred             hc-CCCCcCcHHHHHHHHHHH------------HHHHHHHHHhCCCCCCeecHh-HHHHHH
Confidence            99 999999999999998752            378899999999999999977 666554

>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5

Probab=99.57  E-value=8e-15  Score=131.72  Aligned_cols=118  Identities=20%  Similarity=0.296  Sum_probs=94.5

Q ss_pred             HHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhc----cC--C-----
Q 009980          365 QNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSL----RK--S-----  432 (521)
Q Consensus       365 ~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~----~~--~-----  432 (521)
                      ..+..+|..+|.|++| |+..||..++..++.....+.+..+|+.+|.|++|.|+++||..++..+    +.  .     
T Consensus        63 ~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~~~~~~~~~g~~~~~~~~~  142 (193)
T 1bjf_A           63 KFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDE  142 (193)
T ss_dssp             HHHHHHHHHHCSSCSSEEEHHHHHHHHHHHTSSCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGG
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHHHHHcCCCHHHHHHHHHhhcCCCCCCeECHHHHHHHHHHHHHHhccccCCCccc
Confidence            3467889999999999 9999999999988777777889999999999999999999999988763    21  1     


Q ss_pred             -CcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcce
Q 009980          433 -QGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKV  495 (521)
Q Consensus       433 -~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I  495 (521)
                       ..++.+..+|+.+|.|++|.|+++||..++..            ..++..+| .+|.|+||.|
T Consensus       143 ~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~------------~~~~~~~~-~~D~~~dG~i  193 (193)
T 1bjf_A          143 STPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKS------------DPSIVRLL-QCDPSSAGQF  193 (193)
T ss_dssp             SSHHHHHHHHHHHSCTTCSSEECHHHHHHHHHH------------CTHHHHTT-CC--------
T ss_pred             ccHHHHHHHHHHHhCCCCCCeEeHHHHHHHHhc------------CHHHHHHh-ccCCCCCCCC
Confidence             22456999999999999999999999999864            12788999 9999999986

>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...

Probab=99.57  E-value=4.1e-15  Score=127.55  Aligned_cols=115  Identities=23%  Similarity=0.343  Sum_probs=100.6

Q ss_pred             hHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHH
Q 009980          401 LAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKL  480 (521)
Q Consensus       401 ~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~  480 (521)
                      .+.++|..+|.|++|.|+.+||..++..++..++..++..+|+.+|.|++|.|+++||..++......     ....+.+
T Consensus        11 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~-----~~~~~~l   85 (148)
T 1exr_A           11 EFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKE-----QDSEEEL   85 (148)
T ss_dssp             HHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHH-----HHHHHHH
T ss_pred             HHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHhcccC-----CCcHHHH
Confidence            46789999999999999999999999999888899999999999999999999999999887642110     0234578


Q ss_pred             HHHHHHhcCCCCcceeHHHHHHHHhc-CccHHHHHHHhhhh
Q 009980          481 DEIFDLMDANNDGKVTFDEFRAAMQR-DSSLQDVVLSSLRQ  520 (521)
Q Consensus       481 ~~~f~~~D~~~dG~I~~~Ef~~~~~~-~~~~~~~~~~~~~~  520 (521)
                      ..+|+.+|+|++|+|+.+||..++.. +..+++++++.|++
T Consensus        86 ~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~  126 (148)
T 1exr_A           86 IEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIR  126 (148)
T ss_dssp             HHHHHHHSTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred             HHHHHHhCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence            89999999999999999999999988 88899999998875

>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A

Probab=99.57  E-value=4.4e-15  Score=127.23  Aligned_cols=114  Identities=14%  Similarity=0.295  Sum_probs=99.7

Q ss_pred             hHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhh-ccCCCcceeHHHHHHHHHhC------CCCCCCCC
Q 009980          401 LAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMY-DIDRSGCITKEEVASMLRAL------PDDCLPVD  473 (521)
Q Consensus       401 ~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~-D~d~~G~I~~~e~~~~l~~~------~~~~~~~~  473 (521)
                      .+.++|..+|.|++|.|+.+||..++..++...+..++..+|+.+ |.|++|.|+++||..++...      ...     
T Consensus         5 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~-----   79 (148)
T 1m45_A            5 ANKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTK-----   79 (148)
T ss_dssp             CCTTCHHHHCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGC-----
T ss_pred             HHHHHHHHHCCCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHhhCCCCCCeEcHHHHHHHHHHHHhhcccccc-----
Confidence            567789999999999999999999999998888999999999999 99999999999999998865      221     


Q ss_pred             CCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc-CccHHHHHHHhhhh
Q 009980          474 ITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR-DSSLQDVVLSSLRQ  520 (521)
Q Consensus       474 ~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~-~~~~~~~~~~~~~~  520 (521)
                       ...+.+..+|+.+|.|++|.|+.+||..++.. +..+++++++.|++
T Consensus        80 -~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~  126 (148)
T 1m45_A           80 -AKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLK  126 (148)
T ss_dssp             -CCTHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSTTCCCHHHHHHHHT
T ss_pred             -ccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHH
Confidence             34568999999999999999999999999998 88899999998875

>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}

Probab=99.56  E-value=2.5e-14  Score=130.55  Aligned_cols=139  Identities=22%  Similarity=0.350  Sum_probs=114.1

Q ss_pred             HHHhhhccCCCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHh
Q 009980          349 KLKNLLGSHDLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFS  427 (521)
Q Consensus       349 ~l~~l~~~~~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~  427 (521)
                      ++..++.....++.....+..+|..+|.|++| |+..||..++..++.....+.+..+|+.+|.|++|.|+++||..++.
T Consensus        41 El~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~  120 (211)
T 2ggz_A           41 EFKTLLGLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFKLYDADGNGSIDKNELLDMFM  120 (211)
T ss_dssp             HHHHHTTCCSCCHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHSCSSHHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             HHHHHHHHhCCCcchHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhccCchHHHHHHHHHHhcCCCCCcCcHHHHHHHHH
Confidence            34444555556666667789999999999999 99999999999887776677899999999999999999999999998


Q ss_pred             hcc-----CCC-cHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHH
Q 009980          428 SLR-----KSQ-GDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFR  501 (521)
Q Consensus       428 ~~~-----~~~-~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~  501 (521)
                      ..+     ... .++.+..+|+.+|.|++|.|+++||..++...            .++..+|..       .++|+||+
T Consensus       121 ~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~------------~~~~~~~~~-------~~d~~~f~  181 (211)
T 2ggz_A          121 AVQALNGQQTLSPEEFINLVFHKIDINNDGELTLEEFINGMAKD------------QDLLEIVYK-------SFDFSNVL  181 (211)
T ss_dssp             HHTTSSCCCSCTHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHTT------------TTTHHHHHH-------HSCTTHHH
T ss_pred             HHHhhcCCccccHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHhC------------HHHHHHHhc-------cCCHHHHH
Confidence            764     333 34568999999999999999999999998742            245667763       35589999


Q ss_pred             HHHhc
Q 009980          502 AAMQR  506 (521)
Q Consensus       502 ~~~~~  506 (521)
                      .+|..
T Consensus       182 ~~~~~  186 (211)
T 2ggz_A          182 RVICN  186 (211)
T ss_dssp             HHHHH
T ss_pred             HHHhc
Confidence            99987

>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E

Probab=99.56  E-value=8.7e-15  Score=130.31  Aligned_cols=132  Identities=18%  Similarity=0.251  Sum_probs=103.7

Q ss_pred             CCHHHHHHHHHhcCCCCCcchHHHHHHHHcC-CCCcceeHHHHHHHHhhccCC-CcHHHHHHHhHhhccCCCcceeHHHH
Q 009980          381 ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDN-NRDGTVDMREILCGFSSLRKS-QGDDALRLCFQMYDIDRSGCITKEEV  458 (521)
Q Consensus       381 i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~-~~~g~I~~~ef~~~~~~~~~~-~~~~~l~~~f~~~D~d~~G~I~~~e~  458 (521)
                      ++.+++..+++..+.  +.+++.++++.||. |++|.|+++||..++..++.. .+...+..+|+.+|.|++|.|+++||
T Consensus         1 l~~~el~~l~~~~~~--s~~~i~~l~~~fd~~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef   78 (183)
T 1s6c_A            1 HRPEGLEQLEAQTNF--TKRELQVLYRGFKNEXPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDF   78 (183)
T ss_dssp             -----CHHHHHHSSC--CHHHHHHHHHHHHHHCTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHH
T ss_pred             CChHHHHHHHHhcCC--CHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHHcCCCChHHHHHHHHHHhCCCCCCcEeHHHH
Confidence            355677777776654  56788999999998 899999999999999987654 67889999999999999999999999


Q ss_pred             HHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc-----C----ccHHH----HHHHhhhh
Q 009980          459 ASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR-----D----SSLQD----VVLSSLRQ  520 (521)
Q Consensus       459 ~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~-----~----~~~~~----~~~~~~~~  520 (521)
                      ..++...+..      ..++.+..+|+.+|.|++|+|+++||..++..     +    +.+++    ++++.+++
T Consensus        79 ~~~~~~~~~~------~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~  147 (183)
T 1s6c_A           79 VTALSILLRG------TVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQ  147 (183)
T ss_dssp             HHHHHHHHHC------CHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHTC-----------CHHHHHHHHH
T ss_pred             HHHHHHHcCC------CHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHHHhccccCcCccHHHHHHHHHHHHH
Confidence            9998865432      35568999999999999999999999999875     2    22444    66666654

>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C

Probab=99.56  E-value=7.3e-15  Score=127.43  Aligned_cols=116  Identities=17%  Similarity=0.214  Sum_probs=100.3

Q ss_pred             hHHHHHHHHcC--CCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChh
Q 009980          401 LAPRIFDLFDN--NRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPG  478 (521)
Q Consensus       401 ~~~~~f~~~D~--~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~  478 (521)
                      +++++|..||.  |++|.|+..||..+++.++..+++.++..++. .|.+++|.|+++||..++........   ....+
T Consensus        10 elre~F~~fD~~~d~dG~I~~~El~~~lr~lG~~~t~~el~~~~~-~d~~~~g~i~f~eFl~~~~~~~~~~~---~~~~~   85 (159)
T 3i5g_C           10 EVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTEAQVHQHGG-TKKMGEKAYKLEEILPIYEEMSSKDT---GTAAD   85 (159)
T ss_dssp             HHHHHHHHHHHHTTSSSCEEGGGHHHHHHHTTCCCCHHHHHTTTC-CSSTTSCEECHHHHHHHHHHHTTCCT---TCCHH
T ss_pred             HHHHHHHHHCcCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHc-ccccCCCcccHHHHHHHHHHhhcccc---cchHH
Confidence            56789999995  89999999999999999999999999988765 47889999999999998876433211   13456


Q ss_pred             HHHHHHHHhcCCCCcceeHHHHHHHHhc-CccHHHHHHHhhhh
Q 009980          479 KLDEIFDLMDANNDGKVTFDEFRAAMQR-DSSLQDVVLSSLRQ  520 (521)
Q Consensus       479 ~~~~~f~~~D~~~dG~I~~~Ef~~~~~~-~~~~~~~~~~~~~~  520 (521)
                      ++..+|+.+|+|++|+|+.+||+++|.. +..+++++++.|++
T Consensus        86 ~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~ls~~e~~~l~~  128 (159)
T 3i5g_C           86 EFMEAFKTFDREGQGLISSAEIRNVLKMLGERITEDQCNDIFT  128 (159)
T ss_dssp             HHHHHHHHHCTTSSSEECHHHHHHHHHHSSSCCCHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence            8999999999999999999999999998 89999999999885

>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8

Probab=99.56  E-value=3.3e-14  Score=124.55  Aligned_cols=118  Identities=21%  Similarity=0.306  Sum_probs=104.0

Q ss_pred             HHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHh
Q 009980          366 NLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQM  444 (521)
Q Consensus       366 ~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~  444 (521)
                      ++..+|..+|.|++| |+.+||..++...      ..+..+|+.+|.|++|.|+.+||..++...+...+++++..+|+.
T Consensus        43 ~~~~l~~~~D~~~~g~i~~~eF~~~~~~~------~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~  116 (167)
T 1gjy_A           43 TCRLMVSMLDRDMSGTMGFNEFKELWAVL------NGWRQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKR  116 (167)
T ss_dssp             HHHHHHHHHCTTCCSCBCHHHHHHHHHHH------HHHHHHHHHHCTTCCSEECHHHHHHHHHTTTCCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCCCCcCCHHHHHHHHHHH------HHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHH
Confidence            456678899999999 9999999988764      578999999999999999999999999988888888999999999


Q ss_pred             hccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHH
Q 009980          445 YDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAM  504 (521)
Q Consensus       445 ~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~  504 (521)
                      +  |++|.|+++||..++...            ..+..+|+.+|.|++|.|+.+ |.+++
T Consensus       117 ~--d~dg~i~~~eF~~~~~~~------------~~~~~~F~~~D~d~~G~i~~~-~~~~l  161 (167)
T 1gjy_A          117 Y--STSGKITFDDYIACCVKL------------RALTDSFRRRDSAQQGMVNFS-YDDFI  161 (167)
T ss_dssp             T--CBTTBEEHHHHHHHHHHH------------HHHHHHHHHHCTTCCSEEEEE-HHHHH
T ss_pred             h--CcCCcCcHHHHHHHHHHH------------HHHHHHHHHhCCCCCeeEEee-HHHHH
Confidence            9  889999999999988753            378899999999999999975 54443

>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A

Probab=99.55  E-value=2.5e-14  Score=123.93  Aligned_cols=119  Identities=19%  Similarity=0.248  Sum_probs=102.1

Q ss_pred             hHHHHHHHHc-CCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhH
Q 009980          401 LAPRIFDLFD-NNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGK  479 (521)
Q Consensus       401 ~~~~~f~~~D-~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~  479 (521)
                      .+.++|..+| .|++|.|+.+||..++..++...+...+..+|+.+|.|++|.|+++||..++........... ...+.
T Consensus        14 ~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~-~~~~~   92 (158)
T 2jnf_A           14 LLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGARFLGEEVNPE-QMQQE   92 (158)
T ss_dssp             HHHHHHHHSBCSSSCSSEEHHHHHHHHHHTTCSCSHHHHHHHHHHHCTTCCSEECHHHHHHHHHHHCCCCCCTT-TTSST
T ss_pred             HHHHHHHHhCCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccccchh-hHHHH
Confidence            4677999999 999999999999999999888888999999999999999999999999999976433210000 23347


Q ss_pred             HHHHHHHhcCCCCcceeHHHHHHHHhc-CccHHHHHHHhhhh
Q 009980          480 LDEIFDLMDANNDGKVTFDEFRAAMQR-DSSLQDVVLSSLRQ  520 (521)
Q Consensus       480 ~~~~f~~~D~~~dG~I~~~Ef~~~~~~-~~~~~~~~~~~~~~  520 (521)
                      +..+|+.+|.|++|.|+.+||..++.. +..+++++++.+++
T Consensus        93 ~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~  134 (158)
T 2jnf_A           93 LREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMID  134 (158)
T ss_dssp             HHHHHHHHCSSSSSSEEHHHHHHHHHHHCTTCCHHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCeEcHHHHHHHHHHhCCcCCHHHHHHHHH
Confidence            999999999999999999999999998 88889999988875

>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A

Probab=99.55  E-value=2.8e-14  Score=124.77  Aligned_cols=119  Identities=18%  Similarity=0.260  Sum_probs=105.9

Q ss_pred             HHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHh
Q 009980          366 NLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQM  444 (521)
Q Consensus       366 ~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~  444 (521)
                      ++..+|..+|.|++| |+.+||..++...      ..+..+|+.+|.|++|.|+.+||..++..++...+++++..+|+.
T Consensus        41 ~~~~l~~~~D~~~~g~i~~~eF~~~~~~~------~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~  114 (165)
T 1k94_A           41 TCRIMIAMLDRDHTGKMGFNAFKELWAAL------NAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKR  114 (165)
T ss_dssp             HHHHHHHHHCTTCSSCBCHHHHHHHHHHH------HHHHHHHHHHCTTCCSBCCHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCcCCHHHHHHHHHHH------HHHHHHHHHhCCCCCceECHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence            456678899999999 9999999988764      678999999999999999999999999998888889999999999


Q ss_pred             hccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHh
Q 009980          445 YDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQ  505 (521)
Q Consensus       445 ~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~  505 (521)
                      +  |++|.|+++||..++...            +.+..+|+.+|+|++|.|+.+ |.+++.
T Consensus       115 ~--d~dg~i~~~eF~~~~~~~------------~~~~~~F~~~D~d~~G~i~~~-~~~~l~  160 (165)
T 1k94_A          115 Y--SKNGRIFFDDYVACCVKL------------RALTDFFRKRDHLQQGSANFI-YDDFLQ  160 (165)
T ss_dssp             H--CBTTBCBHHHHHHHHHHH------------HHHHHHHHTTCTTCCSEEEEE-HHHHHH
T ss_pred             h--CCCCeEcHHHHHHHHHHH------------HHHHHHHHHhCCCCCCeEeee-HHHHHH
Confidence            9  899999999999998753            378899999999999999877 777664

>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A

Probab=99.55  E-value=1.7e-14  Score=125.33  Aligned_cols=115  Identities=18%  Similarity=0.286  Sum_probs=102.0

Q ss_pred             hHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHH
Q 009980          401 LAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKL  480 (521)
Q Consensus       401 ~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~  480 (521)
                      .+.++|..+|.|++|.|+++||..++..++...+..++..+|+.+|.+++|.|+++||..++......     ....+.+
T Consensus        24 ~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~-----~~~~~~~   98 (161)
T 3fwb_A           24 EIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFYIVMGEKILK-----RDPLDEI   98 (161)
T ss_dssp             HHHHHHHHHCTTSSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSCEEHHHHHHHHHHHHHT-----CCHHHHH
T ss_pred             HHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCCCCeEeHHHHHHHHHHHHhc-----CCcHHHH
Confidence            56779999999999999999999999999888899999999999999999999999999988753211     1235689


Q ss_pred             HHHHHHhcCCCCcceeHHHHHHHHhc-CccHHHHHHHhhhh
Q 009980          481 DEIFDLMDANNDGKVTFDEFRAAMQR-DSSLQDVVLSSLRQ  520 (521)
Q Consensus       481 ~~~f~~~D~~~dG~I~~~Ef~~~~~~-~~~~~~~~~~~~~~  520 (521)
                      ..+|+.+|.|++|.|+.+||..++.. +..+++++++.+++
T Consensus        99 ~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~  139 (161)
T 3fwb_A           99 KRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIE  139 (161)
T ss_dssp             HHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred             HHHHHHHcCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence            99999999999999999999999998 88899999998875

>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A

Probab=99.55  E-value=2.9e-14  Score=127.71  Aligned_cols=135  Identities=18%  Similarity=0.239  Sum_probs=112.0

Q ss_pred             CCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCC-CCcceeHHHHHHHHhhccC-CCcHHHHHHHhHhhccCCCccee
Q 009980          378 GDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNN-RDGTVDMREILCGFSSLRK-SQGDDALRLCFQMYDIDRSGCIT  454 (521)
Q Consensus       378 ~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~-~~g~I~~~ef~~~~~~~~~-~~~~~~l~~~f~~~D~d~~G~I~  454 (521)
                      +.+ ++..++..+.+..+  .+.+++.++|+.||.+ ++|.|+++||..++..++. ..+.+.+..+|+.+|.|++|.|+
T Consensus         4 ~~~~l~~~~l~~l~~~~~--~~~~~i~~~~~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~   81 (190)
T 1fpw_A            4 KTSKLSKDDLTCLKQSTY--FDRREIQQWHKGFLRDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIH   81 (190)
T ss_dssp             CSCCSTTHHHHHHTTTCC--STHHHHHHHHHHHHHHCTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEEC
T ss_pred             ccCCCCHHHHHHHHHhcC--CCHHHHHHHHHHHHHHCCCCcCcHHHHHHHHHHHcCCCCcHHHHHHHHHHHCCCCCCcEe
Confidence            344 88888888877643  4577899999999987 8999999999999988643 34566799999999999999999


Q ss_pred             HHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc-----C--------ccHHHHHHHhhhh
Q 009980          455 KEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR-----D--------SSLQDVVLSSLRQ  520 (521)
Q Consensus       455 ~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~-----~--------~~~~~~~~~~~~~  520 (521)
                      .+||..++...+..      .+++++..+|+.+|.|++|.|+++||..++..     +        +..+++++..+++
T Consensus        82 ~~ef~~~~~~~~~~------~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~  154 (190)
T 1fpw_A           82 FEEFITVLSTTSRG------TLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFK  154 (190)
T ss_dssp             HHHHHHHHHHHSCC------CSTHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHccC------CcHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHHHhccccCcccccchHHHHHHHHHH
Confidence            99999999876643      45678999999999999999999999999875     2        3467777877764

>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A

Probab=99.54  E-value=1.3e-14  Score=123.87  Aligned_cols=115  Identities=20%  Similarity=0.302  Sum_probs=101.2

Q ss_pred             hHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHH
Q 009980          401 LAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKL  480 (521)
Q Consensus       401 ~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~  480 (521)
                      .+.++|..+|.|++|.|+.+||..++..++...+...+..+|+.+|.+++|.|+++||..++......     ....+.+
T Consensus        12 ~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~ef~~~~~~~~~~-----~~~~~~~   86 (147)
T 4ds7_A           12 EFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALMSRQLKC-----NDSEQEL   86 (147)
T ss_dssp             HHHHHHHHHCTTCSSEEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHHHHHT-----HHHHHHH
T ss_pred             HHHHHHHHHCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHhccC-----CCcHHHH
Confidence            56779999999999999999999999998888899999999999999999999999999988653211     0234578


Q ss_pred             HHHHHHhcCCCCcceeHHHHHHHHhc-CccHHHHHHHhhhh
Q 009980          481 DEIFDLMDANNDGKVTFDEFRAAMQR-DSSLQDVVLSSLRQ  520 (521)
Q Consensus       481 ~~~f~~~D~~~dG~I~~~Ef~~~~~~-~~~~~~~~~~~~~~  520 (521)
                      ..+|+.+|.|++|.|+.+||..++.. +..+++++++.+++
T Consensus        87 ~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~  127 (147)
T 4ds7_A           87 LEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLR  127 (147)
T ss_dssp             HHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred             HHHHHHhCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHH
Confidence            99999999999999999999999998 88899999988875

>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A

Probab=99.54  E-value=4.1e-14  Score=129.89  Aligned_cols=149  Identities=13%  Similarity=0.149  Sum_probs=111.3

Q ss_pred             CCHHHHHHHHHHHHhhhcCC-CC-CCHHHHHHHHHhcCC--------CCC-----cchHHHHHHHHcCCCCcceeHHHHH
Q 009980          359 LNEEEIQNLRIHFRTICANG-DN-ATLSEFEEVLKAMNM--------SSL-----VPLAPRIFDLFDNNRDGTVDMREIL  423 (521)
Q Consensus       359 ~~~~~~~~l~~~F~~~D~~~-~g-i~~~el~~~l~~~~~--------~~~-----~~~~~~~f~~~D~~~~g~I~~~ef~  423 (521)
                      +..-.+..+.++|+....+. +. ++..++...|..+..        ...     ...+..+|+.||.|++|.|+|.||+
T Consensus        76 l~lv~l~~~~~~f~~~~l~~~~~~l~~~~l~~~L~~lY~~l~~~~p~~v~~~~~~~~~a~~lf~~FD~~~~G~I~f~ef~  155 (261)
T 1eg3_A           76 LDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFK  155 (261)
T ss_dssp             GGGCCHHHHHHHHHHTTCCCTTSEEEHHHHHHHHHHHHHHHHHHSTTTCCHHHHHHHHHHHHHHHHCTTCCSEEEHHHHH
T ss_pred             eceeeHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHHHHHHHhhCcCcCCchhhHHHHHHHHHHHccCCCCceEeHHHHH
Confidence            33344555666676655442 23 788887777665411        111     1244669999999999999999999


Q ss_pred             HHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHh-------CCCCCCCCCCCChhHHHHHHHHhcCCCCccee
Q 009980          424 CGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRA-------LPDDCLPVDITEPGKLDEIFDLMDANNDGKVT  496 (521)
Q Consensus       424 ~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~-------~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~  496 (521)
                      .++..+.....+++++.+|+.+| |++|+|+.+|+..++..       +|+...-.....++.++.+|+.+|  +||.|+
T Consensus       156 ~aLs~l~rG~leeKL~w~F~lyD-D~~G~I~~~El~~il~~i~~i~~~vge~~~~~~~~~e~~v~~~F~~~d--~dg~It  232 (261)
T 1eg3_A          156 TGIISLCKAHLEDKYRYLFKQVA-SSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFAN--NKPEIE  232 (261)
T ss_dssp             HHHHHTSSSCHHHHHHHHHHHHS-CTTSCBCHHHHHHHHHHHHHHHHHTTCGGGGTCSCCHHHHHHHHHHTT--TCSCBC
T ss_pred             HHHHHHcCCCHHHHHHHHHheee-CCCCCCcHHHHHHHHHHHHHHHHhcCCcccCCCCCHHHHHHHHHHhCC--CCCcCC
Confidence            99999888888999999999999 99999999999998854       333211111235678999999996  889999


Q ss_pred             HHHHHHHHhcCccH
Q 009980          497 FDEFRAAMQRDSSL  510 (521)
Q Consensus       497 ~~Ef~~~~~~~~~~  510 (521)
                      .+||.+.++.+|.+
T Consensus       233 ~~EFl~~~~~dp~i  246 (261)
T 1eg3_A          233 AALFLDWMRLEPQS  246 (261)
T ss_dssp             HHHHHHHHHTCCTT
T ss_pred             HHHHHHHHHhCcHH
Confidence            99999999987754

>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A

Probab=99.54  E-value=2.9e-14  Score=129.64  Aligned_cols=137  Identities=15%  Similarity=0.216  Sum_probs=103.8

Q ss_pred             CCCC-CCHHHHHHHHHhcCCCCCc-chHHHHHHHHcCC--CCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcc
Q 009980          377 NGDN-ATLSEFEEVLKAMNMSSLV-PLAPRIFDLFDNN--RDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGC  452 (521)
Q Consensus       377 ~~~g-i~~~el~~~l~~~~~~~~~-~~~~~~f~~~D~~--~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~  452 (521)
                      |+.| ++.+++..+.+..+....+ ..+.++|..+|.|  ++|.|+++||..++.. .....+..+..+|+.+|.|++|.
T Consensus        12 ~~~g~l~~~el~~l~~~~~~s~~~~~~l~~~F~~~D~d~~~~G~i~~~e~~~~l~~-~~~~~~~~~~~~f~~~D~d~~g~   90 (207)
T 2ehb_A           12 NAMRPPGYEDPELLASVTPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFR-NRNRRNLFADRIFDVFDVKRNGV   90 (207)
T ss_dssp             ---------CHHHHHHHSSCCHHHHHHHHHHHHHHTTSSSCSSCEEHHHHHHHHHS-CTTCCCHHHHHHHHHHCTTCSSE
T ss_pred             ccccccCHHHHHHHHHhCCCCHHHHHHHHHHHHHhccccCCCCccCHHHHHHHHhc-cccccHHHHHHHHHHhcCCCCCe
Confidence            5667 8888888888766544322 3567899999999  9999999999999876 33344456788999999999999


Q ss_pred             eeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHh----c-CccHHHHHHHhhh
Q 009980          453 ITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQ----R-DSSLQDVVLSSLR  519 (521)
Q Consensus       453 I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~----~-~~~~~~~~~~~~~  519 (521)
                      |+++||..++......     ...++.+..+|+.+|.|++|+|+.+||..++.    . +..+++++++.++
T Consensus        91 i~~~Ef~~~~~~~~~~-----~~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~~  157 (207)
T 2ehb_A           91 IEFGEFVRSLGVFHPS-----APVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMV  157 (207)
T ss_dssp             ECHHHHHHHHGGGSTT-----SCHHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHHHHHHTCCCCHHHHHHHH
T ss_pred             EeHHHHHHHHHHHccC-----CCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHcccccCHHHHHHHH
Confidence            9999999999876432     13456799999999999999999999999985    2 6778888877665

>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A

Probab=99.53  E-value=1.3e-14  Score=127.40  Aligned_cols=115  Identities=24%  Similarity=0.397  Sum_probs=100.9

Q ss_pred             hHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHH
Q 009980          401 LAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKL  480 (521)
Q Consensus       401 ~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~  480 (521)
                      .+.++|..+|.|++|.|+.+||..++..++...+..++..+|+.+|.|++|.|+++||..++......     ....+.+
T Consensus        29 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~-----~~~~~~~  103 (169)
T 3qrx_A           29 EIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGE-----RDSREEI  103 (169)
T ss_dssp             HHHHHHHHHCTTCCSEECHHHHHHHHHHTSCCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHHHHHHH-----HHHHHHH
T ss_pred             HHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHhcc-----cCcHHHH
Confidence            56779999999999999999999999999888899999999999999999999999999988653211     0124578


Q ss_pred             HHHHHHhcCCCCcceeHHHHHHHHhc-CccHHHHHHHhhhh
Q 009980          481 DEIFDLMDANNDGKVTFDEFRAAMQR-DSSLQDVVLSSLRQ  520 (521)
Q Consensus       481 ~~~f~~~D~~~dG~I~~~Ef~~~~~~-~~~~~~~~~~~~~~  520 (521)
                      ..+|+.+|.|++|.|+.+||..++.. +..+++++++.+++
T Consensus       104 ~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~  144 (169)
T 3qrx_A          104 LKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIA  144 (169)
T ss_dssp             HHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred             HHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHH
Confidence            89999999999999999999999998 78899999988875

>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3

Probab=99.53  E-value=2.6e-15  Score=166.08  Aligned_cols=134  Identities=19%  Similarity=0.313  Sum_probs=106.8

Q ss_pred             CCHHH-HHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCC--------CCCcchHHHHHHHHcCCCCcceeHHHHHHHHhh
Q 009980          359 LNEEE-IQNLRIHFRTICANGDN-ATLSEFEEVLKAMNM--------SSLVPLAPRIFDLFDNNRDGTVDMREILCGFSS  428 (521)
Q Consensus       359 ~~~~~-~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~--------~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~  428 (521)
                      +++++ +++++++|..+| +++| |+.+||..+|+.++.        ..+.++++.+|+.+|.|++|.|+|+||+.++..
T Consensus       527 l~~~e~~~~l~~~F~~~D-~~dG~Is~~El~~~L~~~~~~~~~~~~~~~s~~~~~~l~~~~D~d~~G~I~~~EF~~~~~~  605 (900)
T 1qxp_A          527 LSEEEIDDNFKTLFSKLA-GDDMEISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLVEFNILWNR  605 (900)
T ss_dssp             --------------CCCC-CSSSSCCCSCTTTTTCC---------CCCCCHHHHHHHHHHHCC--CCCCCSSSHHHHHHH
T ss_pred             CCcchHHHHHHHHHHHHc-CCCCcCCHHHHHHHHHHhhcccccccCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH
Confidence            33444 788999999999 9999 999999999998865        567789999999999999999999999998876


Q ss_pred             ccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          429 LRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       429 ~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      +      ++++.+|+.||.|++|+|+.+||..++..++..      .++++++.+|+.+| |+||.|+|+||..++..
T Consensus       606 ~------~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~------l~~~~~~~l~~~~d-d~dg~I~~~eF~~~~~~  670 (900)
T 1qxp_A          606 I------RNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFK------LPCQLHQVIVARFA-DDELIIDFDNFVRCLVR  670 (900)
T ss_dssp             H------HHHHHHHGGGCTTCCSCCBHHHHHHHHHHTTEE------CCHHHHHHHHHHTS-CSSSBCCHHHHHHHHHH
T ss_pred             H------HHHHHHHHhhCCCCCCeECHHHHHHHHHHhCCC------CCHHHHHHHHHHhC-CCCCeEcHHHHHHHHHH
Confidence            4      679999999999999999999999999988754      67779999999999 99999999999998864

>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A

Probab=99.53  E-value=4e-14  Score=118.66  Aligned_cols=107  Identities=27%  Similarity=0.408  Sum_probs=90.7

Q ss_pred             hHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHH
Q 009980          401 LAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKL  480 (521)
Q Consensus       401 ~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~  480 (521)
                      ++.++|..+|.|++|.|+++||..++..++...+.+.+..+|+.+|.|++|.|+.+||..++..+.....   ..+.+++
T Consensus         1 ~l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~---~~~~~~~   77 (134)
T 1jfj_A            1 MAEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDL---SDDKIGL   77 (134)
T ss_dssp             CHHHHHHHHCTTCSSEEEHHHHHHHHHTTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSS---HHHHHHH
T ss_pred             CHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhccccc---CCCHHHH
Confidence            3678999999999999999999999999888888999999999999999999999999998853211100   1234579


Q ss_pred             HHHHHHhcCCCCcceeHHHHHHHHhc-CccH
Q 009980          481 DEIFDLMDANNDGKVTFDEFRAAMQR-DSSL  510 (521)
Q Consensus       481 ~~~f~~~D~~~dG~I~~~Ef~~~~~~-~~~~  510 (521)
                      ..+|+.+|.|++|.|+++||..++.. +..+
T Consensus        78 ~~~f~~~D~d~~G~i~~~e~~~~l~~~~~~~  108 (134)
T 1jfj_A           78 KVLYKLMDVDGDGKLTKEEVTSFFKKHGIEK  108 (134)
T ss_dssp             HHHHHHHCCSSSSEEEHHHHHHHHTTTTCHH
T ss_pred             HHHHHHHCCCCCCccCHHHHHHHHHHhCHHH
Confidence            99999999999999999999999987 4443

>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...

Probab=99.52  E-value=2.2e-14  Score=124.67  Aligned_cols=118  Identities=20%  Similarity=0.314  Sum_probs=99.9

Q ss_pred             hHHHHHHHHcCCC-CcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhH
Q 009980          401 LAPRIFDLFDNNR-DGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGK  479 (521)
Q Consensus       401 ~~~~~f~~~D~~~-~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~  479 (521)
                      .+.++|..+|.|+ +|.|+.+||..++..++...+..++..+|+.+|.|++|.|+++||..++.......  ......+.
T Consensus        19 ~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~eF~~~~~~~~~~~--~~~~~~~~   96 (161)
T 1dtl_A           19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDD--SKGKSEEE   96 (161)
T ss_dssp             HHHHHHHHHTTTCGGGSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC-------CHHHH
T ss_pred             HHHHHHHHHcCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhccc--ccchHHHH
Confidence            4678999999999 99999999999999988888899999999999999999999999999887643200  00134567


Q ss_pred             HHHHHHHhcCCCCcceeHHHHHHHHhc-CccHHHHHHHhhhh
Q 009980          480 LDEIFDLMDANNDGKVTFDEFRAAMQR-DSSLQDVVLSSLRQ  520 (521)
Q Consensus       480 ~~~~f~~~D~~~dG~I~~~Ef~~~~~~-~~~~~~~~~~~~~~  520 (521)
                      +..+|+.+|.|++|.|+.+||..++.. +..+++++++.+++
T Consensus        97 ~~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~~~~~~~~~~  138 (161)
T 1dtl_A           97 LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMK  138 (161)
T ss_dssp             HHHHHHHHCTTCSSEEEHHHHGGGGTTC--CCCHHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence            999999999999999999999999988 77888888888774

>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A

Probab=99.52  E-value=6e-14  Score=125.63  Aligned_cols=132  Identities=17%  Similarity=0.211  Sum_probs=109.9

Q ss_pred             CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCC-CCcceeHHHHHHHHhhc-cCCCcHHHHHHHhHhhccCCCcceeHHHH
Q 009980          381 ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNN-RDGTVDMREILCGFSSL-RKSQGDDALRLCFQMYDIDRSGCITKEEV  458 (521)
Q Consensus       381 i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~-~~g~I~~~ef~~~~~~~-~~~~~~~~l~~~f~~~D~d~~G~I~~~e~  458 (521)
                      ++.+++..+.+..+.  +..++.++|+.||.+ ++|.|+++||..++..+ ....+...+..+|+.+|.|++|.|+++||
T Consensus         8 l~~~~l~~l~~~~~~--~~~~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef   85 (190)
T 1g8i_A            8 LKPEVVEELTRKTYF--TEKEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEF   85 (190)
T ss_dssp             CCHHHHHHHHHTSSS--CHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTCSSEEEHHHH
T ss_pred             CCHHHHHHHHHccCC--CHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCChHHHHHHHHHHHhcCCCCeEeHHHH
Confidence            788888888876543  467899999999998 89999999999999876 22355677999999999999999999999


Q ss_pred             HHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc-------------CccHHHHHHHhhhh
Q 009980          459 ASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR-------------DSSLQDVVLSSLRQ  520 (521)
Q Consensus       459 ~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~-------------~~~~~~~~~~~~~~  520 (521)
                      ..++...+..      ...+.+..+|+.+|.|++|.|+++||..++..             ++..+++++..+++
T Consensus        86 ~~~~~~~~~~------~~~~~~~~~f~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~  154 (190)
T 1g8i_A           86 IQALSVTSRG------TLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFA  154 (190)
T ss_dssp             HHHHHHHHHC------CHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHHC-----CCGGGSSHHHHHHHHHH
T ss_pred             HHHHHHhcCC------CHHHHHHHHHHhhcCCCCCeECHHHHHHHHHHHHHHhCCccCCccccccHHHHHHHHHH
Confidence            9998865432      34568999999999999999999999999875             23467777877764

>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A

Probab=99.51  E-value=7.4e-14  Score=126.02  Aligned_cols=119  Identities=23%  Similarity=0.325  Sum_probs=104.9

Q ss_pred             HHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHh
Q 009980          366 NLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQM  444 (521)
Q Consensus       366 ~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~  444 (521)
                      ++..+|..+|.|++| |+.+||..++...      ..+..+|+.+|.|++|.|+.+||..++...+...+++++..+|+.
T Consensus        74 ~~~~l~~~~D~d~~g~i~~~eF~~~~~~~------~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~  147 (198)
T 1juo_A           74 TCRLMVSMLDRDMSGTMGFNEFKELWAVL------NGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKR  147 (198)
T ss_dssp             HHHHHHHHHCTTCSSCEEHHHHHHHHHHH------HHHHHHHHTTCTTCCSEECHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCeECHHHHHHHHHHH------HHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence            456678899999999 9999999988764      578999999999999999999999999988888889999999999


Q ss_pred             hccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeH--HHHHHHH
Q 009980          445 YDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTF--DEFRAAM  504 (521)
Q Consensus       445 ~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~--~Ef~~~~  504 (521)
                      +  |++|.|+++||..++...            +.+..+|+.+|.|++|.|+.  ++|..++
T Consensus       148 ~--d~dg~i~~~eF~~~~~~~------------~~~~~~F~~~D~d~~G~is~~~~~~l~~~  195 (198)
T 1juo_A          148 Y--STNGKITFDDYIACCVKL------------RALTDSFRRRDTAQQGVVNFPYDDFIQCV  195 (198)
T ss_dssp             T--CSSSSEEHHHHHHHHHHH------------HHHHHHHHHTCTTCCSEEEEEHHHHHHHH
T ss_pred             h--CCCCeEcHHHHHHHHHHH------------HHHHHHHHHhCCCCCCeEeecHHHHHHHH
Confidence            9  899999999999998753            37889999999999999988  6665544

>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B

Probab=99.51  E-value=4e-14  Score=121.90  Aligned_cols=112  Identities=17%  Similarity=0.314  Sum_probs=96.9

Q ss_pred             hHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHH
Q 009980          401 LAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKL  480 (521)
Q Consensus       401 ~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~  480 (521)
                      +++++|+.+|.|++|.|+.+||..+++.++..+++.++..++    .+++|.|+++||..++......     ..+++++
T Consensus        17 elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~----~~~~~~i~f~ef~~~~~~~~~~-----~~~~~~l   87 (153)
T 3i5g_B           17 ELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAML----KECPGQLNFTAFLTLFGEKVSG-----TDPEDAL   87 (153)
T ss_dssp             HHHHHHHHHCCSTTSCCCHHHHHHHHHHTTSCCCHHHHHHHH----HTSSSCCCSHHHHHTTTTTTTT-----CCCHHHH
T ss_pred             HHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCccHHHHHHHH----HhccCCccHHHHHHHHHhhhcc-----cccHHHH
Confidence            567899999999999999999999999999999888777655    4667889999999887654322     1356789


Q ss_pred             HHHHHHhcCCCCcceeHHHHHHHHhc-CccHHHHHHHhhhhC
Q 009980          481 DEIFDLMDANNDGKVTFDEFRAAMQR-DSSLQDVVLSSLRQQ  521 (521)
Q Consensus       481 ~~~f~~~D~~~dG~I~~~Ef~~~~~~-~~~~~~~~~~~~~~~  521 (521)
                      ..+|+.+|+|++|+|+.+||+.+|.. +..+|+++++.|+++
T Consensus        88 ~~aF~~fD~d~~G~I~~~el~~~l~~~g~~ls~~ei~~~~~~  129 (153)
T 3i5g_B           88 RNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKNVWKD  129 (153)
T ss_dssp             HHHHHTTCSSCSSCCCHHHHHHHHHSSSSCCCHHHHHHHHTT
T ss_pred             HHHHhccccCCCCeEeHHHHHHHHHHcCCcCCHHHHHHHHHH
Confidence            99999999999999999999999998 899999999999864

>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}

Probab=99.51  E-value=2.6e-14  Score=128.11  Aligned_cols=115  Identities=25%  Similarity=0.351  Sum_probs=99.2

Q ss_pred             cchHHHHHHHHcCCCCcceeHHHHHHHHhhc-----------cCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCC
Q 009980          399 VPLAPRIFDLFDNNRDGTVDMREILCGFSSL-----------RKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPD  467 (521)
Q Consensus       399 ~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~-----------~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~  467 (521)
                      ...+.++|..+|.|++|.|+++||..++..+           +...+...+..+|+.+|.|++|.|+++||..++.....
T Consensus        39 ~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~ef~~~~~~~~~  118 (191)
T 3khe_A           39 TKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQL  118 (191)
T ss_dssp             THHHHHHHHHHCTTCSSEECHHHHHHHHHHHHC-----CCHHHHHHHHHHHHHHHHHTCTTCSSSEEHHHHHHHHSCHHH
T ss_pred             HHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhcc
Confidence            4578899999999999999999999999876           44556788999999999999999999999998753221


Q ss_pred             CCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhcCccHHHHHHHhhhh
Q 009980          468 DCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDSSLQDVVLSSLRQ  520 (521)
Q Consensus       468 ~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~~~~~~~~~~~~~~~  520 (521)
                      .      ...+.+..+|+.+|.|++|.|+.+||..++. +..+++++++.+++
T Consensus       119 ~------~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~-~~~~~~~~~~~~~~  164 (191)
T 3khe_A          119 L------LSRERLLAAFQQFDSDGSGKITNEELGRLFG-VTEVDDETWHQVLQ  164 (191)
T ss_dssp             H------CCHHHHHHHHHHHCTTCSSEECHHHHHHHTT-SSCCCHHHHHHHHH
T ss_pred             c------chHHHHHHHHHHHCCCCcCcCCHHHHHHHHc-cCCCCHHHHHHHHH
Confidence            1      3456899999999999999999999999999 77788888888774

>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A

Probab=99.51  E-value=1.3e-15  Score=123.03  Aligned_cols=103  Identities=16%  Similarity=0.216  Sum_probs=87.5

Q ss_pred             cCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhC---CCCC
Q 009980          393 MNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRAL---PDDC  469 (521)
Q Consensus       393 ~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~---~~~~  469 (521)
                      ++..++.+++.++|+.+|  ++|.|+|+||+.++...  ....+.++.+|+.||.|++|+|+.+||..++..+   +.. 
T Consensus         2 l~~~~~~~e~~~l~~~~d--~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~-   76 (108)
T 2kyc_A            2 LTDILSPSDIAAALRDCQ--APDSFSPKKFFQISGMS--KKSSSQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARV-   76 (108)
T ss_dssp             TTSSSCHHHHHHHHTTSC--STTTCCHHHHHHHHTCT--TCCSSSHHHHCSSSCSCCSSCCCGGGTTTSHHHHSSSCCC-
T ss_pred             ccccCCHHHHHHHHHHcC--CCCcCCHHHHHHHHhhC--cccHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhhccCC-
Confidence            456677788899999888  89999999999988532  2345679999999999999999999999999887   332 


Q ss_pred             CCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHh
Q 009980          470 LPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQ  505 (521)
Q Consensus       470 ~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~  505 (521)
                           .+++++..+|+.+|.|+||.|+|+||..+|.
T Consensus        77 -----~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~  107 (108)
T 2kyc_A           77 -----LTASETKTFLAAADHDGDGKIGAEEFQEMVQ  107 (108)
T ss_dssp             -----CCTTTTHHHHTTTCCSSSSCCCSSHHHHHHH
T ss_pred             -----CCHHHHHHHHHHhCCCCCCcCCHHHHHHHHh
Confidence                 4566899999999999999999999999875

>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}

Probab=99.51  E-value=7.6e-14  Score=123.89  Aligned_cols=111  Identities=21%  Similarity=0.292  Sum_probs=95.9

Q ss_pred             chHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhH
Q 009980          400 PLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGK  479 (521)
Q Consensus       400 ~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~  479 (521)
                      ..+.++|..+|.|++|.|+++||..++..++..  ..++..+|+.+|.|++|.|+++||..++.....       ..++.
T Consensus        39 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g~~--~~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~~~-------~~~~~  109 (180)
T 3mse_B           39 KYINELFYKLDTNHNGSLSHREIYTVLASVGIK--KWDINRILQALDINDRGNITYTEFMAGCYRWKN-------IESTF  109 (180)
T ss_dssp             HHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTCC--HHHHHHHHHHHCTTCCSEECHHHHHHHHSCCTT-------C--CH
T ss_pred             HHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCC--HHHHHHHHHHhCCCCCCcCcHHHHHHHHHhccc-------CCHHH
Confidence            467889999999999999999999999987643  578999999999999999999999998875432       12358


Q ss_pred             HHHHHHHhcCCCCcceeHHHHHHHHhcCccHHHHHHHhhhh
Q 009980          480 LDEIFDLMDANNDGKVTFDEFRAAMQRDSSLQDVVLSSLRQ  520 (521)
Q Consensus       480 ~~~~f~~~D~~~dG~I~~~Ef~~~~~~~~~~~~~~~~~~~~  520 (521)
                      +..+|+.+|.|++|+|+.+||..++. +..+++++++.+++
T Consensus       110 ~~~~F~~~D~d~~G~I~~~El~~~l~-~~~~~~~~~~~~~~  149 (180)
T 3mse_B          110 LKAAFNKIDKDEDGYISKSDIVSLVH-DKVLDNNDIDNFFL  149 (180)
T ss_dssp             HHHHHHHHCTTCSSCBCHHHHHHHTT-TSSCCHHHHHHHHH
T ss_pred             HHHHHHHHCCCCCCCCCHHHHHHHHc-CCCCCHHHHHHHHH
Confidence            99999999999999999999999999 56788888888875

>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}

Probab=99.51  E-value=2e-14  Score=129.70  Aligned_cols=114  Identities=21%  Similarity=0.276  Sum_probs=88.7

Q ss_pred             hHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHH
Q 009980          401 LAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKL  480 (521)
Q Consensus       401 ~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~  480 (521)
                      .+.++|+.+|.|++|.|+++||..++..++...+..++..+|+.+|.|++|.|+++||..++......      ..++.+
T Consensus        58 ~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~~g~I~~~EF~~~~~~~~~~------~~~~~l  131 (197)
T 3pm8_A           58 NLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATIDKQTY------LKKEVC  131 (197)
T ss_dssp             HHHHHHHHHCTTCSSEECHHHHHHHHHHHC----CHHHHHHHHC-------CEEHHHHHHTTCCHHHH------CSHHHH
T ss_pred             HHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHhh------hhHHHH
Confidence            56789999999999999999999999988887888899999999999999999999998876432111      345689


Q ss_pred             HHHHHHhcCCCCcceeHHHHHHHHhc---CccHHHHHHHhhhh
Q 009980          481 DEIFDLMDANNDGKVTFDEFRAAMQR---DSSLQDVVLSSLRQ  520 (521)
Q Consensus       481 ~~~f~~~D~~~dG~I~~~Ef~~~~~~---~~~~~~~~~~~~~~  520 (521)
                      ..+|+.+|.|++|+|+.+||..++..   +..+++++++.|++
T Consensus       132 ~~~F~~~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~l~~  174 (197)
T 3pm8_A          132 LIPFKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQ  174 (197)
T ss_dssp             HHHHHHHCTTCSSEECHHHHHHHHC----CCHHHHHHHHHHHH
T ss_pred             HHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCCHHHHHHHHH
Confidence            99999999999999999999999987   46789999998875

>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C

Probab=99.50  E-value=2e-14  Score=123.56  Aligned_cols=118  Identities=18%  Similarity=0.189  Sum_probs=100.4

Q ss_pred             chHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccC--CCcceeHHHHHHHHHhCCCCCCCCCCCCh
Q 009980          400 PLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDID--RSGCITKEEVASMLRALPDDCLPVDITEP  477 (521)
Q Consensus       400 ~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d--~~G~I~~~e~~~~l~~~~~~~~~~~~~~~  477 (521)
                      ..+.++|..+|.|++|.|+.+||..++..++...+..++..+|+.+|.|  ++|.|+++||..++........   ....
T Consensus        10 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~~~g~i~~~eF~~~~~~~~~~~~---~~~~   86 (151)
T 1w7j_B           10 EEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRG---QGTY   86 (151)
T ss_dssp             -CHHHHHHHHCCSSSSEEESTTHHHHHHHTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC----------
T ss_pred             HHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCcCCCCcCcHHHHHHHHHHHhccCC---CCcH
Confidence            4678999999999999999999999999988888899999999999999  9999999999999886532110   0123


Q ss_pred             hHHHHHHHHhcCCCCcceeHHHHHHHHhc-CccHHHHHHHhhhh
Q 009980          478 GKLDEIFDLMDANNDGKVTFDEFRAAMQR-DSSLQDVVLSSLRQ  520 (521)
Q Consensus       478 ~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~-~~~~~~~~~~~~~~  520 (521)
                      +.+..+|+.+|.|++|+|+.+||..++.. +..+++++++.+++
T Consensus        87 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~  130 (151)
T 1w7j_B           87 EDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLA  130 (151)
T ss_dssp             -CCHHHHHTTCTTSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHT
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHH
Confidence            46788999999999999999999999988 78899999998875

>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*

Probab=99.50  E-value=1.1e-13  Score=118.42  Aligned_cols=116  Identities=18%  Similarity=0.216  Sum_probs=101.6

Q ss_pred             hHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhh---ccCCCcceeHHHHHHHHHhCCCCCCCCCCCCh
Q 009980          401 LAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMY---DIDRSGCITKEEVASMLRALPDDCLPVDITEP  477 (521)
Q Consensus       401 ~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~---D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~  477 (521)
                      .+.++|..+|.|++|.|+.+||..++..++...+..++..+|+.+   |.|+ |.|+++||..++.......   .....
T Consensus         9 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~~~~d~~~-g~i~~~eF~~~~~~~~~~~---~~~~~   84 (149)
T 2mys_C            9 DFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNA-AAITFEEFLPMLQAAANNK---DQGTF   84 (149)
T ss_pred             HHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhhhccccC-CcCcHHHHHHHHHHHhccC---CcchH
Confidence            567899999999999999999999999988888899999999999   9999 9999999999987642110   01345


Q ss_pred             hHHHHHHHHhcCCCCcceeHHHHHHHHhc-CccHHHHHHHhhhh
Q 009980          478 GKLDEIFDLMDANNDGKVTFDEFRAAMQR-DSSLQDVVLSSLRQ  520 (521)
Q Consensus       478 ~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~-~~~~~~~~~~~~~~  520 (521)
                      +.+..+|+.+|.|++|.|+.+||..++.. +..+++++++.+++
T Consensus        85 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~  128 (149)
T 2mys_C           85 EDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMK  128 (149)
T ss_pred             HHHHHHHHHhCCCCCceEcHHHHHHHHHHhCCCCCHHHHHHHHh
Confidence            68999999999999999999999999998 88899999998875

>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A

Probab=99.50  E-value=2.8e-14  Score=126.47  Aligned_cols=115  Identities=23%  Similarity=0.365  Sum_probs=98.9

Q ss_pred             hHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHH
Q 009980          401 LAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKL  480 (521)
Q Consensus       401 ~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~  480 (521)
                      .+.++|..+|.|++|.|+.+||..++..++...+..++..+|+.+|.|++|.|+++||..++......     ....+.+
T Consensus        12 ~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~EF~~~~~~~~~~-----~~~~~~~   86 (179)
T 2f2o_A           12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD-----TDSEEEI   86 (179)
T ss_dssp             HHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHH-----HHHHHHH
T ss_pred             HHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHccC-----cccHHHH
Confidence            56789999999999999999999999998888889999999999999999999999999988653111     0123578


Q ss_pred             HHHHHHhcCCCCcceeHHHHHHHHhc-CccHHHHHHHhhhh
Q 009980          481 DEIFDLMDANNDGKVTFDEFRAAMQR-DSSLQDVVLSSLRQ  520 (521)
Q Consensus       481 ~~~f~~~D~~~dG~I~~~Ef~~~~~~-~~~~~~~~~~~~~~  520 (521)
                      ..+|+.+|.|++|.|+.+||..++.. +..+++++++.+++
T Consensus        87 ~~~F~~~D~d~~G~I~~~E~~~~l~~~g~~~~~~~~~~~~~  127 (179)
T 2f2o_A           87 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR  127 (179)
T ss_dssp             HHHHHHHCTTCSSEECHHHHHHHHHHC--CCCHHHHHHHHH
T ss_pred             HHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence            99999999999999999999999988 77888888888874

>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...

Probab=99.49  E-value=5.5e-14  Score=121.54  Aligned_cols=115  Identities=19%  Similarity=0.191  Sum_probs=101.7

Q ss_pred             hHHHHHHHHcC--CCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChh
Q 009980          401 LAPRIFDLFDN--NRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPG  478 (521)
Q Consensus       401 ~~~~~f~~~D~--~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~  478 (521)
                      .+.++|..+|.  |++|.|+.+||..++..++...+..++..+ +.+|.|++|.|+++||..++......    .....+
T Consensus        10 ~l~~~F~~~D~~~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l-~~~D~~~~g~i~~~eF~~~~~~~~~~----~~~~~~   84 (156)
T 1wdc_C           10 DLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAV-GGTHKMGEKSLPFEEFLPAYEGLMDC----EQGTFA   84 (156)
T ss_dssp             HHHHHHHHHHHHTCSSSCEEGGGHHHHHHHTTCCCCHHHHHHT-TCCSSTTSCEECHHHHHHHHHHHTTS----CCCCHH
T ss_pred             HHHHHHHHHccCCCCCCCCcHHHHHHHHHHcCCCCCHHHHHHH-HhhCCCCCCeeeHHHHHHHHHHHhhc----cCChHH
Confidence            46789999999  999999999999999998888888999999 99999999999999999998865321    013456


Q ss_pred             HHHHHHHHhcCCCCcceeHHHHHHHHhc-CccHHHHHHHhhhh
Q 009980          479 KLDEIFDLMDANNDGKVTFDEFRAAMQR-DSSLQDVVLSSLRQ  520 (521)
Q Consensus       479 ~~~~~f~~~D~~~dG~I~~~Ef~~~~~~-~~~~~~~~~~~~~~  520 (521)
                      .+..+|+.+|.|++|.|+.+||..++.. +..+++++++.+++
T Consensus        85 ~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~  127 (156)
T 1wdc_C           85 DYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIK  127 (156)
T ss_dssp             HHHHHHHTTCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHH
Confidence            8999999999999999999999999988 78889999988875

>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A

Probab=99.49  E-value=7.2e-14  Score=120.10  Aligned_cols=119  Identities=17%  Similarity=0.267  Sum_probs=100.8

Q ss_pred             hHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHH
Q 009980          401 LAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKL  480 (521)
Q Consensus       401 ~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~  480 (521)
                      .+.++|..+|.|++|.|+.+||..++..++...+..++..+|+.+|.|++|.|+++||..++......... .....+.+
T Consensus        12 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~-~~~~~~~~   90 (153)
T 3ox6_A           12 ELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETA-DMIGVKEL   90 (153)
T ss_dssp             HHHHHHHHHHHHCSSSCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSTTCCCHHHHHHHHHHHHTTCCH-HHHCHHHH
T ss_pred             HHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCccCcHHHHHHHHHHHhhcccc-ccccHHHH
Confidence            46778999999999999999999999999888899999999999999999999999999988653221000 00124578


Q ss_pred             HHHHHHhcCCCCcceeHHHHHHHHhc--CccHHHHHHHhhhh
Q 009980          481 DEIFDLMDANNDGKVTFDEFRAAMQR--DSSLQDVVLSSLRQ  520 (521)
Q Consensus       481 ~~~f~~~D~~~dG~I~~~Ef~~~~~~--~~~~~~~~~~~~~~  520 (521)
                      ..+|+.+|.|++|.|+.+||..++..  +..+++++++.+++
T Consensus        91 ~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~  132 (153)
T 3ox6_A           91 RDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIR  132 (153)
T ss_dssp             HHHHHHHCTTCSSSBCHHHHHHHHHHHHSSCCCHHHHHHHHH
T ss_pred             HHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence            99999999999999999999999986  77888899888875

>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}

Probab=99.49  E-value=5.4e-13  Score=120.29  Aligned_cols=116  Identities=20%  Similarity=0.325  Sum_probs=99.1

Q ss_pred             HHHHhhhccCCCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHH
Q 009980          348 KKLKNLLGSHDLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGF  426 (521)
Q Consensus       348 ~~l~~l~~~~~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~  426 (521)
                      .++..++.....++.....+..+|..+|.|++| |+..||..++..++.....+.+..+|+.+|.|++|.|+++||..++
T Consensus        35 ~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~Ef~~~~  114 (198)
T 2r2i_A           35 YEFKQFFGLKNLSPSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNII  114 (198)
T ss_dssp             HHHHHHHTCCSCCHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHSSCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHH
T ss_pred             HHHHHHHHHhCCCcchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHccCchHHHHHHHHHHhcCCCCCcCcHHHHHHHH
Confidence            345555656666677777799999999999999 9999999999998877777889999999999999999999999999


Q ss_pred             hhcc------CCC-cHHHHHHHhHhhccCCCcceeHHHHHHHHH
Q 009980          427 SSLR------KSQ-GDDALRLCFQMYDIDRSGCITKEEVASMLR  463 (521)
Q Consensus       427 ~~~~------~~~-~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~  463 (521)
                      ..++      ... .++.+..+|+.+|.|++|.|+++||..++.
T Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~  158 (198)
T 2r2i_A          115 KAIRAINRCNEAMTAEEFTNMVFDKIDINGDGELSLEEFMEGVQ  158 (198)
T ss_dssp             HHTTGGGGSSSCCCHHHHHHHHHHHHCTTCSSEECHHHHHHHHT
T ss_pred             HHHHhhcCCCchhhHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            8764      223 345699999999999999999999999885

>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5

Probab=99.49  E-value=5.1e-14  Score=125.92  Aligned_cols=114  Identities=21%  Similarity=0.339  Sum_probs=97.9

Q ss_pred             chHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhH
Q 009980          400 PLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGK  479 (521)
Q Consensus       400 ~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~  479 (521)
                      ..+.++|..+|.|++|.|+++||..++..++...+++++..+|+.+|.|++|.|+++||..++..+...      ...+.
T Consensus        10 ~~l~~~F~~~D~d~dG~I~~~E~~~~l~~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~~~~------~~~~~   83 (188)
T 1s6i_A           10 GGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKL------EREEN   83 (188)
T ss_dssp             CSHHHHHHTTSSSSSSCEEHHHHHHHHTTTTCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSS------CCCCS
T ss_pred             HHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHhcc------CHHHH
Confidence            468899999999999999999999999998888888999999999999999999999999988754322      22346


Q ss_pred             HHHHHHHhcCCCCcceeHHHHHHHHhcCccHHHHHHHhhhh
Q 009980          480 LDEIFDLMDANNDGKVTFDEFRAAMQRDSSLQDVVLSSLRQ  520 (521)
Q Consensus       480 ~~~~f~~~D~~~dG~I~~~Ef~~~~~~~~~~~~~~~~~~~~  520 (521)
                      +..+|+.+|.|++|+|+.+||..++.... +++++++.+++
T Consensus        84 l~~~F~~~D~d~dG~Is~~El~~~l~~~g-~~~~~~~~~~~  123 (188)
T 1s6i_A           84 LVSAFSYFDKDGSGYITLDEIQQACKDFG-LDDIHIDDMIK  123 (188)
T ss_dssp             THHHHHHTTTTCSSEEEHHHHHHTTTTTT-CCTTHHHHHHH
T ss_pred             HHHHHHHHCCCCCCcCcHHHHHHHHHHcC-CCHHHHHHHHH
Confidence            89999999999999999999999998732 56667776664

>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...

Probab=99.49  E-value=9.4e-14  Score=120.74  Aligned_cols=119  Identities=20%  Similarity=0.299  Sum_probs=100.6

Q ss_pred             chHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhH
Q 009980          400 PLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGK  479 (521)
Q Consensus       400 ~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~  479 (521)
                      ..+.++|..+|.|++|.|+.+||..++..++...+...+..+|+.+|.|++|.|+++||..++........  .....+.
T Consensus        20 ~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~--~~~~~~~   97 (162)
T 1top_A           20 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDA--KGKSEEE   97 (162)
T ss_dssp             HHHHHHHHTTTCSCSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHHH--HHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCcEeHHHHHHHHHHHhcccc--ccccHHH
Confidence            35678999999999999999999999999888888999999999999999999999999998865311000  0003457


Q ss_pred             HHHHHHHhcCCCCcceeHHHHHHHHhc-CccHHHHHHHhhhh
Q 009980          480 LDEIFDLMDANNDGKVTFDEFRAAMQR-DSSLQDVVLSSLRQ  520 (521)
Q Consensus       480 ~~~~f~~~D~~~dG~I~~~Ef~~~~~~-~~~~~~~~~~~~~~  520 (521)
                      +..+|+.+|.|++|.|+.+||..++.. +..+++++++.+++
T Consensus        98 ~~~~F~~~D~d~~G~I~~~e~~~~l~~~g~~~~~~~~~~~~~  139 (162)
T 1top_A           98 LANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMK  139 (162)
T ss_dssp             HHHHHHHHCTTCSSCBCHHHHHHHHHTTTCCCCHHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence            899999999999999999999999988 77888899888874

>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}

Probab=99.48  E-value=5.9e-14  Score=127.20  Aligned_cols=115  Identities=22%  Similarity=0.295  Sum_probs=97.7

Q ss_pred             chHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhH
Q 009980          400 PLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGK  479 (521)
Q Consensus       400 ~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~  479 (521)
                      ..+.++|+.+|.|++|.|+++||..++..++...+++++..+|+.+|.|++|.|+++||..++......      ...+.
T Consensus        37 ~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~~~~------~~~~~  110 (204)
T 3e3r_A           37 QGLARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQ------AREAV  110 (204)
T ss_dssp             ---CHHHHHHCTTCCSSBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHTSCCCCH------HHHHH
T ss_pred             HHHHHHHHHHccCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHhhcCc------hHHHH
Confidence            467889999999999999999999999999888899999999999999999999999999987653221      23457


Q ss_pred             HHHHHHHhcCCCCcceeHHHHHHHHhc--------CccHHHHHHHhhhh
Q 009980          480 LDEIFDLMDANNDGKVTFDEFRAAMQR--------DSSLQDVVLSSLRQ  520 (521)
Q Consensus       480 ~~~~f~~~D~~~dG~I~~~Ef~~~~~~--------~~~~~~~~~~~~~~  520 (521)
                      +..+|+.+|.|++|+|+.+||..++..        +...++++++.+++
T Consensus       111 ~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~  159 (204)
T 3e3r_A          111 IAAAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDEVLRRFLD  159 (204)
T ss_dssp             HHHHHHHHCTTCSSEECHHHHHHHCCCTTCHHHHTTSSCHHHHHHHHHH
T ss_pred             HHHHHHHhCcCCCCeEeHHHHHHHHccccCCccccCCCChHHHHHHHHH
Confidence            899999999999999999999999974        45567777877764

>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5

Probab=99.48  E-value=1.1e-13  Score=127.45  Aligned_cols=118  Identities=19%  Similarity=0.252  Sum_probs=99.6

Q ss_pred             CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCC-CCcceeHHHHHHHHhhccCC-CcHHHHHHHhHhhccCCCcceeHHHH
Q 009980          381 ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNN-RDGTVDMREILCGFSSLRKS-QGDDALRLCFQMYDIDRSGCITKEEV  458 (521)
Q Consensus       381 i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~-~~g~I~~~ef~~~~~~~~~~-~~~~~l~~~f~~~D~d~~G~I~~~e~  458 (521)
                      ++.+++..+++..+  .+..++.++|+.||.+ ++|.|+++||..++..++.. .+...+..+|+.+|.|++|.|+++||
T Consensus        34 l~~~~l~~l~~~~~--~s~~ei~~l~~~Fd~~d~~G~I~~~E~~~~l~~l~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef  111 (224)
T 1s1e_A           34 HRPEGLEQLEAQTN--FTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDF  111 (224)
T ss_dssp             ----CHHHHHHHSS--CCHHHHHHHHHHHHHHCTTSCBCHHHHHHHHHTTCTTSCCHHHHHHHHHHHCTTCSSCBCHHHH
T ss_pred             CCHHHHHHHHHHcC--CCHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHhcCCCCCcEeHHHH
Confidence            78888888888776  4577899999999984 99999999999999987653 67888999999999999999999999


Q ss_pred             HHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          459 ASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       459 ~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      ..++...+..      ..++++..+|+.+|.|+||+|+++||..++..
T Consensus       112 ~~~l~~~~~~------~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~  153 (224)
T 1s1e_A          112 VTALSILLRG------TVHEKLRWTFNLYDINKDGYINKEEMMDIVKA  153 (224)
T ss_dssp             HHHHHHHHHC------CHHHHHHHHHHHHCTTCCSEECHHHHHHHHHH
T ss_pred             HHHHHHHccC------CHHHHHHHHHHHHcCCCCCeECHHHHHHHHHH
Confidence            9998865432      35668999999999999999999999999865

>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5

Probab=99.48  E-value=1.8e-13  Score=124.14  Aligned_cols=102  Identities=18%  Similarity=0.222  Sum_probs=92.1

Q ss_pred             cchHHHHHHHHcCC-CCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCCh
Q 009980          399 VPLAPRIFDLFDNN-RDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEP  477 (521)
Q Consensus       399 ~~~~~~~f~~~D~~-~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~  477 (521)
                      .+++.++|..+|.| ++|.|+++||..++..++...+.+.+..+|+.+|.|++|.|+++||..++..++..      ..+
T Consensus        21 ~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~------~~~   94 (204)
T 1jba_A           21 AAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRG------TLE   94 (204)
T ss_dssp             HHHHHHHHHHHHSSSTTCCEEHHHHHHHHHCCSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSC------CCT
T ss_pred             HHHHHHHHHHHHhhCCCCCcCHHHHHHHHHHhcCCCcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHHccC------CHH
Confidence            45788899999999 89999999999999998877788899999999999999999999999999876543      355


Q ss_pred             hHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          478 GKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       478 ~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      +.+..+|+.+|.|++|.|+++||..++..
T Consensus        95 ~~~~~~F~~~D~d~~G~I~~~E~~~~l~~  123 (204)
T 1jba_A           95 HKLKWTFKIYDKDRNGCIDRQELLDIVES  123 (204)
T ss_dssp             HHHHHHHHHHCSSCSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            68999999999999999999999999875

>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=99.48  E-value=1.2e-13  Score=117.74  Aligned_cols=114  Identities=17%  Similarity=0.259  Sum_probs=99.3

Q ss_pred             cchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCC-CCCCCCCCCCh
Q 009980          399 VPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALP-DDCLPVDITEP  477 (521)
Q Consensus       399 ~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~-~~~~~~~~~~~  477 (521)
                      .+++.++|..+|.|++|.|+.+||..++..++...+..++..+|+.   |++|.|+++||..++.... ..     ....
T Consensus         4 ~~el~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~---~~~g~i~~~eF~~~~~~~~~~~-----~~~~   75 (145)
T 2bl0_B            4 ADQIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQ---LNAKEFDLATFKTVYRKPIKTP-----TEQS   75 (145)
T ss_dssp             HHHHHHHHHHHCTTCSSCEEGGGHHHHHHHTTCCCCHHHHHHHHHH---HTSSEECHHHHHHHHTSCCCCG-----GGGH
T ss_pred             HHHHHHHHHHhCCCCcCccCHHHHHHHHHHhCCCCCHHHHHHHHHh---cCCCeEcHHHHHHHHHHHhhcC-----cccH
Confidence            3458899999999999999999999999998888888899999888   7899999999999987642 11     1345


Q ss_pred             hHHHHHHHHhcCCCCcceeHHHHHHHHhc-CccHHHHHHHhhhh
Q 009980          478 GKLDEIFDLMDANNDGKVTFDEFRAAMQR-DSSLQDVVLSSLRQ  520 (521)
Q Consensus       478 ~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~-~~~~~~~~~~~~~~  520 (521)
                      +.+..+|+.+|.|++|.|+.+||..++.. +..+++++++.+++
T Consensus        76 ~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~  119 (145)
T 2bl0_B           76 KEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMK  119 (145)
T ss_dssp             HHHHHHHHHHCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHT
T ss_pred             HHHHHHHHHhCCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHH
Confidence            68999999999999999999999999988 77889999998875

>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C

Probab=99.47  E-value=2.7e-14  Score=121.42  Aligned_cols=103  Identities=16%  Similarity=0.228  Sum_probs=50.8

Q ss_pred             HHHHHHHHcCCCCcceeHHHHHHHHhhccC-----CCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCC--CCCCC
Q 009980          402 APRIFDLFDNNRDGTVDMREILCGFSSLRK-----SQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDC--LPVDI  474 (521)
Q Consensus       402 ~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~-----~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~--~~~~~  474 (521)
                      ...+|+.+|.|+||.|+++||..++.....     ...++.++.+|+.||.|++|+|+.+||..++..++...  .....
T Consensus        29 ~~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~g~~  108 (143)
T 3a4u_B           29 SFSQPGSMGLDKNTVHDQEHIMEHLEGVINKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPL  108 (143)
T ss_dssp             ----------------------------------CCCHHHHHHHHHHHTCTTCSSCEEHHHHHHTCC-------------
T ss_pred             CHHHHHHhCCCCCCcCcHHHHHHHHHHHhcccccccCHHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHhhhccccCCC
Confidence            346888899999999999999888765421     24467899999999999999999999999887653200  00011


Q ss_pred             CChhHH----HHHHHHhcCCCCcceeHHHHHHHH
Q 009980          475 TEPGKL----DEIFDLMDANNDGKVTFDEFRAAM  504 (521)
Q Consensus       475 ~~~~~~----~~~f~~~D~~~dG~I~~~Ef~~~~  504 (521)
                      .+++++    ..+|+.+|.|+||+|+|+||..+|
T Consensus       109 ~s~~e~~~~~~~~f~~~D~d~dG~Is~~EF~~~~  142 (143)
T 3a4u_B          109 MSEDELINIIDGVLRDDDKNNDGYIDYAEFAKSL  142 (143)
T ss_dssp             CCHHHHHHHHHHHHHHHCTTCSSEECHHHHHC--
T ss_pred             CCHHHHHHHHHHHHHHcCCCCCCcEeHHHHHHHH
Confidence            455555    455599999999999999999876

>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A

Probab=99.47  E-value=3e-14  Score=142.00  Aligned_cols=116  Identities=23%  Similarity=0.363  Sum_probs=102.2

Q ss_pred             chHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhH
Q 009980          400 PLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGK  479 (521)
Q Consensus       400 ~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~  479 (521)
                      ..+.++|+.+|.|++|.|+.+||..++..++...+.+++..+|+.+|.|++|.|+++||..++......     ....+.
T Consensus       312 ~el~~~F~~fD~D~dG~Is~~EL~~~L~~lg~~~s~eel~~Lf~~~D~DgdG~IsfeEFl~ll~~~~~~-----~~~~e~  386 (450)
T 3sg6_A          312 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD-----TDSEEE  386 (450)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTSSSSEEHHHHHHHHHC-----------CHHH
T ss_pred             HHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcccHHHHHHHHHhhccc-----cchhhH
Confidence            467889999999999999999999999998888899999999999999999999999999999864322     134568


Q ss_pred             HHHHHHHhcCCCCcceeHHHHHHHHhc-CccHHHHHHHhhhh
Q 009980          480 LDEIFDLMDANNDGKVTFDEFRAAMQR-DSSLQDVVLSSLRQ  520 (521)
Q Consensus       480 ~~~~f~~~D~~~dG~I~~~Ef~~~~~~-~~~~~~~~~~~~~~  520 (521)
                      +..+|+.+|.|++|+|+.+||..++.. +..+++++++.|++
T Consensus       387 l~~aFk~fD~D~dG~Is~eELr~~L~~lG~~ls~eei~~Lf~  428 (450)
T 3sg6_A          387 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR  428 (450)
T ss_dssp             HHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence            999999999999999999999999998 88899999988875

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5

Probab=99.47  E-value=1.4e-13  Score=121.46  Aligned_cols=120  Identities=16%  Similarity=0.193  Sum_probs=95.2

Q ss_pred             chHHHHHHHHcCCCCcceeHHHHHH----HHhhccCCCcHHHHH-----------HHhHhhccCCCcceeHHHHHHHHHh
Q 009980          400 PLAPRIFDLFDNNRDGTVDMREILC----GFSSLRKSQGDDALR-----------LCFQMYDIDRSGCITKEEVASMLRA  464 (521)
Q Consensus       400 ~~~~~~f~~~D~~~~g~I~~~ef~~----~~~~~~~~~~~~~l~-----------~~f~~~D~d~~G~I~~~e~~~~l~~  464 (521)
                      ..+.++|..+|.|++|.|+++||..    ++..++...+..++.           .+|+.+|.|++|.|+++||..++..
T Consensus         7 ~~l~~~F~~~D~d~~G~i~~~el~~~~~~~l~~~g~~~~~~~~~~l~~~~~~~~~~lf~~~D~d~dg~i~~~Ef~~~~~~   86 (176)
T 1nya_A            7 DRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFIRVTEN   86 (176)
T ss_dssp             HHHHHHHHHCCSSCCSSBCSHHHHHHHHHHHHHTSSCSSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence            3567899999999999999999999    566677777666665           8999999999999999999999876


Q ss_pred             CCCCCCC--CCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhcCccHHHHHHHhhhh
Q 009980          465 LPDDCLP--VDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDSSLQDVVLSSLRQ  520 (521)
Q Consensus       465 ~~~~~~~--~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~~~~~~~~~~~~~~~  520 (521)
                      .......  ......+.+..+|+.+|.|++|.|+++||..++.... +++++++.+++
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g-~~~~~~~~~~~  143 (176)
T 1nya_A           87 LIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALG-MSKAEAAEAFN  143 (176)
T ss_dssp             HHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTT-CCHHHHHHHHH
T ss_pred             HhcCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHhC-CCHHHHHHHHH
Confidence            4332100  0000124689999999999999999999999998833 78888887764

>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5

Probab=99.46  E-value=2.1e-13  Score=115.51  Aligned_cols=115  Identities=14%  Similarity=0.147  Sum_probs=98.1

Q ss_pred             cchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChh
Q 009980          399 VPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPG  478 (521)
Q Consensus       399 ~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~  478 (521)
                      ...+.++|..+|.|++|.|+.+||..++..++...+..++..+|.    +++|.|+++||..++.......   .....+
T Consensus         4 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~----~~~g~i~~~eF~~~~~~~~~~~---~~~~~~   76 (140)
T 1ggw_A            4 DSPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIES----TLPAEVDMEQFLQVLNRPNGFD---MPGDPE   76 (140)
T ss_dssp             CTTTHHHHHHTCSSSSSEECHHHHHHHHHHTSCCCCHHHHHHHHT----TSCSSEEHHHHHHHHCTTSSSS---SSCCHH
T ss_pred             HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHh----CCCCcCcHHHHHHHHHHHhccc---CcccHH
Confidence            356889999999999999999999999999888888888888877    8899999999999987653221   012346


Q ss_pred             HHHHHHHHhcCCCCcceeHHHHHHHHhc-CccHHHHHHHhhhh
Q 009980          479 KLDEIFDLMDANNDGKVTFDEFRAAMQR-DSSLQDVVLSSLRQ  520 (521)
Q Consensus       479 ~~~~~f~~~D~~~dG~I~~~Ef~~~~~~-~~~~~~~~~~~~~~  520 (521)
                      .+..+|+.+|.|++|+|+.+||..++.. +..+++++++.+++
T Consensus        77 ~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~  119 (140)
T 1ggw_A           77 EFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLK  119 (140)
T ss_dssp             HHHHHHHTTCSSCSSCCCHHHHHHHHHHHHSCSCHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCcEeHHHHHHHHHHcCCCCCHHHHHHHHH
Confidence            8999999999999999999999999988 77788999988875

>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A

Probab=99.46  E-value=2e-13  Score=122.25  Aligned_cols=120  Identities=18%  Similarity=0.267  Sum_probs=95.2

Q ss_pred             hHHHHHHHHcCCCCcceeHHHHH-----HHHhhccCCCcHH-----HHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCC
Q 009980          401 LAPRIFDLFDNNRDGTVDMREIL-----CGFSSLRKSQGDD-----ALRLCFQMYDIDRSGCITKEEVASMLRALPDDCL  470 (521)
Q Consensus       401 ~~~~~f~~~D~~~~g~I~~~ef~-----~~~~~~~~~~~~~-----~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~  470 (521)
                      .+.++|..+|.|++|.|+.+||.     .++..++...+..     .+..+|+.+|.|++|.|+++||..++........
T Consensus        17 ~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~~~~   96 (191)
T 1uhk_A           17 RHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGWKKLATDEL   96 (191)
T ss_dssp             HHHHHHHHHCTTCCSEEEHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhhccCCCCCcCcHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHhCcCCCCcCcHHHHHHHHHHHhcchh
Confidence            56789999999999999999999     7787777766665     6899999999999999999999998765311000


Q ss_pred             -CCCCCChhHHH----HHHHHhcCCCCcceeHHHHHHHHhc-CccHHHHHHHhhhh
Q 009980          471 -PVDITEPGKLD----EIFDLMDANNDGKVTFDEFRAAMQR-DSSLQDVVLSSLRQ  520 (521)
Q Consensus       471 -~~~~~~~~~~~----~~f~~~D~~~dG~I~~~Ef~~~~~~-~~~~~~~~~~~~~~  520 (521)
                       .......+.+.    .+|+.+|.|++|+|+.+||..++.. +..+++++++.+++
T Consensus        97 ~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~~~~  152 (191)
T 1uhk_A           97 EKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFR  152 (191)
T ss_dssp             HHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTSCCSHHHHHHHHH
T ss_pred             hhhhhhhHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence             00001112343    8999999999999999999999988 87888999988875

>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}

Probab=99.45  E-value=1.7e-13  Score=119.69  Aligned_cols=113  Identities=21%  Similarity=0.341  Sum_probs=91.7

Q ss_pred             hHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHH
Q 009980          401 LAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKL  480 (521)
Q Consensus       401 ~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~  480 (521)
                      .+.++|..+|.|++|.|+++||..++..++...+..++..+|+.+|.|++|.|+++||..++......      ...+.+
T Consensus        28 ~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~------~~~~~~  101 (166)
T 2aao_A           28 GLKEMFNMIDADKSGQITFEELKAGLKRVGANLKESEILDLMQAADVDNSGTIDYKEFIAATLHLNKI------EREDHL  101 (166)
T ss_dssp             HHHHHHHHHCTTCCSSBCHHHHHHHGGGGTCCCCHHHHHHHHHHHCTTCCSSBCHHHHHHHHTTCHHH------HTTHHH
T ss_pred             HHHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhhc------ccHHHH
Confidence            46779999999999999999999999998888888999999999999999999999999988643211      234579


Q ss_pred             HHHHHHhcCCCCcceeHHHHHHHHhcCccHHHHHHHhhhh
Q 009980          481 DEIFDLMDANNDGKVTFDEFRAAMQRDSSLQDVVLSSLRQ  520 (521)
Q Consensus       481 ~~~f~~~D~~~dG~I~~~Ef~~~~~~~~~~~~~~~~~~~~  520 (521)
                      ..+|+.+|.|++|.|+.+||..++... .+++++++.+++
T Consensus       102 ~~~F~~~D~d~~G~i~~~e~~~~l~~~-~~~~~~~~~~~~  140 (166)
T 2aao_A          102 FAAFTYFDKDGSGYITPDELQQACEEF-GVEDVRIEELMR  140 (166)
T ss_dssp             HHHHHHHCTTCSSSBCHHHHHHHTCC---------CCHHH
T ss_pred             HHHHHHhCCCCCCcCcHHHHHHHHHHc-CCCHHHHHHHHH
Confidence            999999999999999999999999873 266777777664

>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*

Probab=99.44  E-value=2.4e-13  Score=117.13  Aligned_cols=111  Identities=17%  Similarity=0.314  Sum_probs=93.7

Q ss_pred             hHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHH
Q 009980          401 LAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKL  480 (521)
Q Consensus       401 ~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~  480 (521)
                      .+.++|..+|.|++|.|+.+|| .++...+..+   .+..+|+.+|.|++|.|+++||..++......     ....+.+
T Consensus         7 ~l~~~F~~~D~d~~G~i~~~el-~~l~~~~~~~---~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~-----~~~~~~~   77 (155)
T 3ll8_B            7 RLGKRFKKLDLDNSGSLSVEEF-MSLPELQQNP---LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVK-----GDKEQKL   77 (155)
T ss_dssp             HHHHHHHHHCTTCSSSBCHHHH-TTSGGGTTCT---THHHHHHHHCTTCSSSBCHHHHHHHHGGGCSS-----CCHHHHH
T ss_pred             HHHHHHHHhCcCCCCeEcHHHH-HHhhccccch---HHHHHHHHHCCCCCCcCcHHHHHHHHHHHccc-----CCHHHHH
Confidence            5678999999999999999999 5555554433   68899999999999999999999999875432     1345689


Q ss_pred             HHHHHHhcCCCCcceeHHHHHHHHhc--CccHHHHHHHhhhh
Q 009980          481 DEIFDLMDANNDGKVTFDEFRAAMQR--DSSLQDVVLSSLRQ  520 (521)
Q Consensus       481 ~~~f~~~D~~~dG~I~~~Ef~~~~~~--~~~~~~~~~~~~~~  520 (521)
                      ..+|+.+|.|++|.|+.+||..++..  +..+++++++.+++
T Consensus        78 ~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~  119 (155)
T 3ll8_B           78 RFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVD  119 (155)
T ss_dssp             HHHHHHHCTTCSSCBCHHHHHHHHHHHHGGGSCHHHHHHHHH
T ss_pred             HHHHHHhCCCCCCcCcHHHHHHHHHHHhccCCCHHHHHHHHH
Confidence            99999999999999999999999987  77888888888764

>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A

Probab=99.44  E-value=3.8e-13  Score=124.06  Aligned_cols=131  Identities=18%  Similarity=0.260  Sum_probs=100.0

Q ss_pred             HHHHHHHHHhcCCCCC-cchHHHHHHHHcCC--CCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHH
Q 009980          383 LSEFEEVLKAMNMSSL-VPLAPRIFDLFDNN--RDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVA  459 (521)
Q Consensus       383 ~~el~~~l~~~~~~~~-~~~~~~~f~~~D~~--~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~  459 (521)
                      .+++..+.+..+.... ...+.++|..+|.|  ++|.|+.+||..++.. .....+..+..+|+.+|.|++|.|+++||.
T Consensus        30 ~~~~~~l~~~~~ls~~ei~~l~~~F~~~D~d~~~~G~I~~~El~~~l~~-~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~  108 (226)
T 2zfd_A           30 LGDPELLARDTVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK-TNKKESLFADRVFDLFDTKHNGILGFEEFA  108 (226)
T ss_dssp             --CTHHHHHHSSCCHHHHHHHHHHHHHHHTSSSCSSSBCHHHHHHHHHS-CSSCCCHHHHHHHHHHCSSCSSSBCHHHHH
T ss_pred             HHHHHHHHHhCCCCHHHHHHHHHHHHHhCcccCCCCeEcHHHHHHHHhc-cCcccHHHHHHHHHHHcCCCCCcCcHHHHH
Confidence            3444444444332211 12456789999999  9999999999999876 333444567889999999999999999999


Q ss_pred             HHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHh-----cCccHHHHHHHhhh
Q 009980          460 SMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQ-----RDSSLQDVVLSSLR  519 (521)
Q Consensus       460 ~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~-----~~~~~~~~~~~~~~  519 (521)
                      .++......     ...++.+..+|+.+|.|++|+|+++||..++.     .+..+++++++.++
T Consensus       109 ~~~~~~~~~-----~~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~  168 (226)
T 2zfd_A          109 RALSVFHPN-----APIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDII  168 (226)
T ss_dssp             HHHHHTSTT-----SCHHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHHHHH
T ss_pred             HHHHHHccC-----CCHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHcCCCCCHHHHHHHH
Confidence            999876432     13456799999999999999999999999995     37778888887665

>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}

Probab=99.43  E-value=6.7e-14  Score=126.74  Aligned_cols=136  Identities=15%  Similarity=0.144  Sum_probs=102.3

Q ss_pred             CCHHHHHHHHHhcCCCCC-cchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHH
Q 009980          381 ATLSEFEEVLKAMNMSSL-VPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVA  459 (521)
Q Consensus       381 i~~~el~~~l~~~~~~~~-~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~  459 (521)
                      ++.+++..+.+..+.... ...+.++|..+|.|++|.|+.+||..+ ..++....   +..+|+.+|.|++|.|+++||.
T Consensus         9 l~~~~~~~~~~~~~ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~-~~lg~~~~---~~~l~~~~D~d~dg~i~~~EF~   84 (202)
T 2bec_A            9 AVIPDGDSIRRETGFSQASLLRLHHRFRALDRNKKGYLSRMDLQQI-GALAVNPL---GDRIIESFFPDGSQRVDFPGFV   84 (202)
T ss_dssp             --CCSTTTHHHHHCCCHHHHHHHHHHHHHHCSSCSSCCCHHHHHTC-HHHHHSTT---HHHHHHTTSCSSCCCCCHHHHH
T ss_pred             cCHHHHHHHHHccCCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHH-HhcCCCcc---HHHHHHHhCCCCCCcCcHHHHH
Confidence            455555555555443321 135678899999999999999999998 66654443   8899999999999999999999


Q ss_pred             HHHHhCCCC-----------CCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc--CccHHHHHHHhhhh
Q 009980          460 SMLRALPDD-----------CLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR--DSSLQDVVLSSLRQ  520 (521)
Q Consensus       460 ~~l~~~~~~-----------~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~--~~~~~~~~~~~~~~  520 (521)
                      .++......           .........+.+..+|+.+|.|+||.|+.+||..++..  +..+++++++.+++
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~~~~~~~~~~  158 (202)
T 2bec_A           85 RVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIAD  158 (202)
T ss_dssp             HHHGGGSCCCHHHHC-----CCCCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHSCCSCCCHHHHHHHHH
T ss_pred             HHHHHhcccchhcccccccccccccccHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhcCCCCCHHHHHHHHH
Confidence            998765420           00001133567999999999999999999999999986  56788888888764

>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A

Probab=99.43  E-value=3.5e-13  Score=120.78  Aligned_cols=113  Identities=16%  Similarity=0.196  Sum_probs=94.7

Q ss_pred             chHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhH
Q 009980          400 PLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGK  479 (521)
Q Consensus       400 ~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~  479 (521)
                      ..+.++|..+|.|++|.|+.+||..++..++...+ ..+..+|+.+|.|++|.|+++||..++.....       ..++.
T Consensus        52 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~-~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~-------~~~~~  123 (191)
T 3k21_A           52 EKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLP-YNFDLLLDQIDSDGSGKIDYTEFIAAALDRKQ-------LSKKL  123 (191)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCC-TTHHHHHHHHCTTCSSSEEHHHHHHHHSCGGG-------CCHHH
T ss_pred             HHHHHHHHHHCCCCCCCCcHHHHHHHHHHcCCCcH-HHHHHHHHHhCCCCCCeEeHHHHHHHHHhhhh-------ccHHH
Confidence            35678999999999999999999999998887766 78999999999999999999999998754221       34568


Q ss_pred             HHHHHHHhcCCCCcceeHHHHHHHHhc---CccHHH---HHHHhhhh
Q 009980          480 LDEIFDLMDANNDGKVTFDEFRAAMQR---DSSLQD---VVLSSLRQ  520 (521)
Q Consensus       480 ~~~~f~~~D~~~dG~I~~~Ef~~~~~~---~~~~~~---~~~~~~~~  520 (521)
                      +..+|+.+|.|++|+|+.+||..++..   +..+++   ++++.+++
T Consensus       124 l~~~F~~~D~d~~G~Is~~El~~~l~~~~~~~~l~~~~~~~~~~~~~  170 (191)
T 3k21_A          124 IYCAFRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKRMIR  170 (191)
T ss_dssp             HHHHHHHHSTTCSSCBCHHHHHHHHHHSSSCSCCCHHHHHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCcCCHHHHHHHHHhcCCCCCCCHhHHHHHHHHHH
Confidence            999999999999999999999999976   345554   34666653

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=99.43  E-value=8.2e-13  Score=124.81  Aligned_cols=142  Identities=15%  Similarity=0.119  Sum_probs=111.2

Q ss_pred             cccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      ..+.|++...+|.|+.+.||++..    .+..+++|+.+.....                            ....+.+|
T Consensus        12 ~l~~~~~~~~~~g~s~~~v~~~~~----~~~~~vlK~~~~~~~~----------------------------~~~~~~~E   59 (263)
T 3tm0_A           12 LIEKYRCVKDTEGMSPAKVYKLVG----ENENLYLKMTDSRYKG----------------------------TTYDVERE   59 (263)
T ss_dssp             HHTTSEEEECCSCCSSSEEEEEEC----SSCEEEEEEECGGGTT----------------------------STTCHHHH
T ss_pred             HhccceeEeeccCCCCCeEEEEEC----CCCcEEEEeCCcccCC----------------------------CHHHHHHH
Confidence            446799999999999999999964    3568999998642111                            01237899


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-------
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ-------  160 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~-------  160 (521)
                      ..+++.+.    .+..++++++++.+.+..|+|||+++|.+|.+.+.     +......++.++..+|..||+       
T Consensus        60 ~~~l~~l~----~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~~~-----~~~~~~~~~~~l~~~l~~LH~~~~~~~~  130 (263)
T 3tm0_A           60 KDMMLWLE----GKLPVPKVLHFERHDGWSNLLMSEADGVLCSEEYE-----DEQSPEKIIELYAECIRLFHSIDISDCP  130 (263)
T ss_dssp             HHHHHHHT----TTSCCCCEEEEEEETTEEEEEEECCSSEEHHHHCC-----TTTCHHHHHHHHHHHHHHHHHSCCTTCS
T ss_pred             HHHHHHHh----cCCCCCeEEEEEecCCceEEEEEecCCeehhhccC-----CcccHHHHHHHHHHHHHHHhCCCcccCC
Confidence            99999882    46788999999999999999999999999876521     223345788999999999998       


Q ss_pred             ----------------------------------------------------CCCeeccCCCCcEEEeeCCCCCCEEEee
Q 009980          161 ----------------------------------------------------ANIVHRDLKPENCLFLNDREDSPLKIMD  188 (521)
Q Consensus       161 ----------------------------------------------------~~i~H~dlkp~Nil~~~~~~~~~~kl~D  188 (521)
                                                                          ..++|+|++|.||++   +....+.|+|
T Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~---~~~~~~~lID  207 (263)
T 3tm0_A          131 YTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFV---KDGKVSGFID  207 (263)
T ss_dssp             CBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEE---ETTEEEEECC
T ss_pred             CcchHHHHHHHHHHHHhccccccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEE---ECCcEEEEEE
Confidence                                                                458999999999999   4444567999


Q ss_pred             cCCCc
Q 009980          189 FGLSS  193 (521)
Q Consensus       189 fg~a~  193 (521)
                      |+.+.
T Consensus       208 we~a~  212 (263)
T 3tm0_A          208 LGRSG  212 (263)
T ss_dssp             CTTCE
T ss_pred             chhcc
Confidence            98764

>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5

Probab=99.43  E-value=1.5e-13  Score=122.29  Aligned_cols=119  Identities=21%  Similarity=0.276  Sum_probs=91.5

Q ss_pred             chHHHHHHHH-cCCCCcceeHHHHHHHHhhcc----CCCcHHHHHH-----------HhHhhccCCCcceeHHHHHHHHH
Q 009980          400 PLAPRIFDLF-DNNRDGTVDMREILCGFSSLR----KSQGDDALRL-----------CFQMYDIDRSGCITKEEVASMLR  463 (521)
Q Consensus       400 ~~~~~~f~~~-D~~~~g~I~~~ef~~~~~~~~----~~~~~~~l~~-----------~f~~~D~d~~G~I~~~e~~~~l~  463 (521)
                      ..+.++|+.+ |.|++|.|+++||..++..++    ...+..++..           +|+.+|.|++|.|+++||..++.
T Consensus         8 ~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~   87 (185)
T 2sas_A            8 QKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEEYLAMWE   87 (185)
T ss_dssp             HHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHH
T ss_pred             HHHHHHHHHheeCCCCCeEcHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEcHHHHHHHHH
Confidence            3578899999 999999999999999988876    5666666654           49999999999999999999887


Q ss_pred             hCCCCC---CCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhcCccHHHHHHHhhh
Q 009980          464 ALPDDC---LPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDSSLQDVVLSSLR  519 (521)
Q Consensus       464 ~~~~~~---~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~~~~~~~~~~~~~~  519 (521)
                      ......   ........+.+..+|+.+|.|+||.|+++||..++.... +++++++.++
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~g-~~~~~~~~~~  145 (185)
T 2sas_A           88 KTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQ-LQCADVPAVY  145 (185)
T ss_dssp             HHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSC-CCCSSHHHHH
T ss_pred             HHhccccchhhhhHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhC-CCHHHHHHHH
Confidence            542110   000112346789999999999999999999999997622 4455555554

>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B

Probab=99.42  E-value=1.8e-13  Score=146.87  Aligned_cols=136  Identities=12%  Similarity=0.098  Sum_probs=98.5

Q ss_pred             HHHHHHHHHH--hhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcC-------CCCcceeHHHHHHHHhhccCC
Q 009980          363 EIQNLRIHFR--TICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDN-------NRDGTVDMREILCGFSSLRKS  432 (521)
Q Consensus       363 ~~~~l~~~F~--~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~-------~~~g~I~~~ef~~~~~~~~~~  432 (521)
                      ....++++|.  .+|.|++| |+.+|+..+|+.     ..+++.++++.+|.       +++|.|+|+||+.++..+.  
T Consensus       144 ~~~~Lk~~F~~~~fD~d~dG~Is~~EL~~~l~~-----~~~ev~~li~~~d~~~~~~D~d~~g~idf~EF~~~~~~l~--  216 (799)
T 2zkm_X          144 RSTFLDKILVKLKMQLNSEGKIPVKNFFQMFPA-----DRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLC--  216 (799)
T ss_dssp             HHHHHHHHHHHHHHSCCTTSCEEHHHHHHHSCS-----CHHHHHHHHHHTTCCCCTTCEECGGGCCHHHHHHHHHHHS--
T ss_pred             HHHHHHHHhHHhccCCCCCCeECHHHHHHHHhh-----hHHHHHHHHHHhCcCccccccCCCCcCCHHHHHHHHHHcc--
Confidence            3456888999  89999999 999999998865     25788999999984       8899999999999987754  


Q ss_pred             CcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCC-CCCCCC---CCCChhHHHHHHHHhcCC----CCcceeHHHHHHHH
Q 009980          433 QGDDALRLCFQMYDIDRSGCITKEEVASMLRALP-DDCLPV---DITEPGKLDEIFDLMDAN----NDGKVTFDEFRAAM  504 (521)
Q Consensus       433 ~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~-~~~~~~---~~~~~~~~~~~f~~~D~~----~dG~I~~~Ef~~~~  504 (521)
                       ..++++.+|+.||.|++|+||.+||+.+|.... +.....   ...++++++++++.+|.|    +||.|+|+||.++|
T Consensus       217 -~r~el~~aF~~fD~d~~g~Is~~eL~~fL~~~Qge~~~~~~~~~~~t~ee~~~iI~~~d~d~~~~~dg~is~eeF~~~L  295 (799)
T 2zkm_X          217 -PRPEIDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDKYEPSGINAQRGQLSPEGMVWFL  295 (799)
T ss_dssp             -CCHHHHTTCC--------CCCHHHHHHHHHHTCC---------------CHHHHHHHHCCC--------CCHHHHHHHH
T ss_pred             -CHHHHHHHHHHhccCCCCeEcHHHHHHHHHHhcCCcccccccccCCCHHHHHHHHHHhhcccccccCCccchhhhhhcc
Confidence             347899999999999999999999999999873 321100   014567899999999999    89999999999999


Q ss_pred             hc
Q 009980          505 QR  506 (521)
Q Consensus       505 ~~  506 (521)
                      ..
T Consensus       296 ~S  297 (799)
T 2zkm_X          296 CG  297 (799)
T ss_dssp             HS
T ss_pred             cC
Confidence            86

>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...

Probab=99.42  E-value=7.9e-13  Score=114.19  Aligned_cols=111  Identities=14%  Similarity=0.235  Sum_probs=96.6

Q ss_pred             hHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHH
Q 009980          401 LAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKL  480 (521)
Q Consensus       401 ~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~  480 (521)
                      .+.++|..+|.|++|.|+.+||..++..++...+..++..+|+    +++|.|+++||..++......     ....+.+
T Consensus        19 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~----~~~g~i~~~eF~~~~~~~~~~-----~~~~~~l   89 (156)
T 1wdc_B           19 EMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPLNFTMFLSIFSDKLSG-----TDSEETI   89 (156)
T ss_dssp             HHHHHHHHHCTTCSSSCCHHHHHHHHHHHSSCCCHHHHHHHHT----TSSSCCCHHHHHHHHHHHTCS-----CCCHHHH
T ss_pred             HHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHH----hCCCcCcHHHHHHHHHHHhcC-----CChHHHH
Confidence            5678999999999999999999999999888888888888875    578999999999998754222     1345689


Q ss_pred             HHHHHHhcCCCCcceeHHHHHHHHhc-CccHHHHHHHhhhh
Q 009980          481 DEIFDLMDANNDGKVTFDEFRAAMQR-DSSLQDVVLSSLRQ  520 (521)
Q Consensus       481 ~~~f~~~D~~~dG~I~~~Ef~~~~~~-~~~~~~~~~~~~~~  520 (521)
                      ..+|+.+|.|++|+|+.+||..++.. +..+++++++.|++
T Consensus        90 ~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~  130 (156)
T 1wdc_B           90 RNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFK  130 (156)
T ss_dssp             HHHHHTTCTTCCSCEEHHHHHHHHHHSSSCCCHHHHHHHHH
T ss_pred             HHHHHHHCcCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence            99999999999999999999999988 78899999998875

>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}

Probab=99.42  E-value=4.1e-13  Score=120.26  Aligned_cols=119  Identities=15%  Similarity=0.167  Sum_probs=95.1

Q ss_pred             hHHHHHHHH-cCCCCcceeHHHHHHHHhhc----cCCCcHHHHHHHh-----------HhhccCCCcceeHHHHHHHHHh
Q 009980          401 LAPRIFDLF-DNNRDGTVDMREILCGFSSL----RKSQGDDALRLCF-----------QMYDIDRSGCITKEEVASMLRA  464 (521)
Q Consensus       401 ~~~~~f~~~-D~~~~g~I~~~ef~~~~~~~----~~~~~~~~l~~~f-----------~~~D~d~~G~I~~~e~~~~l~~  464 (521)
                      .+.++|+.+ |.|++|.|+++||..++..+    +...+..++..+|           +.+|.|++|.|+++||..++..
T Consensus        13 ~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~~~   92 (191)
T 2ccm_A           13 KILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARATLKLIWDGLRKYADENEDEQVTKEEWLKMWAE   92 (191)
T ss_dssp             HHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHH
T ss_pred             HHHHhccccccCCCCCeeeHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCeECHHHHHHHHHH
Confidence            567899999 99999999999999999887    6666777777777           9999999999999999998876


Q ss_pred             CCCC---CCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhcCccHHHHHHHhhhh
Q 009980          465 LPDD---CLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDSSLQDVVLSSLRQ  520 (521)
Q Consensus       465 ~~~~---~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~~~~~~~~~~~~~~~  520 (521)
                      ....   .........+.+..+|+.+|.|+||+|+++||..++.... +++++++.+++
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~E~~~~l~~~g-~~~~~~~~~~~  150 (191)
T 2ccm_A           93 CVKSVEKGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYSTVYMSYG-IPKSDCDAAFD  150 (191)
T ss_dssp             HHHHHHTTCCCCHHHHHHHHHHHHHHCTTCSSBCCHHHHHHHHHTTT-CCHHHHHHHHH
T ss_pred             HhccccchhhchHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhC-CCHHHHHHHHH
Confidence            4210   0000012245789999999999999999999999998733 77777877764

>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*

Probab=99.42  E-value=2.9e-13  Score=121.62  Aligned_cols=120  Identities=19%  Similarity=0.281  Sum_probs=89.8

Q ss_pred             hHHHHHHHHcCCCCcceeHHHHH-----HHHhhccCCCcHH-----HHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCC
Q 009980          401 LAPRIFDLFDNNRDGTVDMREIL-----CGFSSLRKSQGDD-----ALRLCFQMYDIDRSGCITKEEVASMLRALPDDCL  470 (521)
Q Consensus       401 ~~~~~f~~~D~~~~g~I~~~ef~-----~~~~~~~~~~~~~-----~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~  470 (521)
                      .+.++|+.+|.|++|.|+.+||.     .++..++...+..     .+..+|+.+|.|++|.|+++||..++........
T Consensus        21 ~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~~~~  100 (195)
T 1qv0_A           21 RHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFLDGWKQLATSEL  100 (195)
T ss_dssp             HHHHHHHHHCTTCSSCBCHHHHHHHHHHTHHHHTTCCHHHHHHHHHHHHHHHHHTTCCTTCCBCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhHcCCCCCCcCcHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHcCCCCCceEcHHHHHHHHHHHHhhhh
Confidence            46789999999999999999999     5677676665555     5889999999999999999999998765311000


Q ss_pred             C-CCCCChhHHH----HHHHHhcCCCCcceeHHHHHHHHhc-CccHHHHHHHhhhh
Q 009980          471 P-VDITEPGKLD----EIFDLMDANNDGKVTFDEFRAAMQR-DSSLQDVVLSSLRQ  520 (521)
Q Consensus       471 ~-~~~~~~~~~~----~~f~~~D~~~dG~I~~~Ef~~~~~~-~~~~~~~~~~~~~~  520 (521)
                      . ......+.+.    .+|+.+|.|++|+|+.+||..++.. +..+++++++.+++
T Consensus       101 ~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~  156 (195)
T 1qv0_A          101 KKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFR  156 (195)
T ss_dssp             HHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHHHHHHHSSCCCHHHHHHHHH
T ss_pred             hcccccHHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence            0 0000112344    8999999999999999999999988 88888899988875

>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A

Probab=99.41  E-value=8.4e-13  Score=112.63  Aligned_cols=112  Identities=14%  Similarity=0.158  Sum_probs=99.5

Q ss_pred             chHHHHHHHHcCCC-CcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChh
Q 009980          400 PLAPRIFDLFDNNR-DGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPG  478 (521)
Q Consensus       400 ~~~~~~f~~~D~~~-~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~  478 (521)
                      ..+.++|..+|.|+ +|.|+.+||..++..++...+..++..+|+.+|.+    |+++||..++......     ....+
T Consensus        14 ~~l~~~F~~~D~d~~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~----i~~~eF~~~~~~~~~~-----~~~~~   84 (146)
T 2qac_A           14 VDESDVRIYFNEKSSGGKISIDNASYNARKLGLAPSSIDEKKIKELYGDN----LTYEQYLEYLSICVHD-----KDNVE   84 (146)
T ss_dssp             SCHHHHHHHHHHHCBTTBEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSE----ECHHHHHHHHHHTCCT-----TCCHH
T ss_pred             HHHHHHHHHhCccCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCC----CCHHHHHHHHHHHhcC-----cchHH
Confidence            46789999999999 99999999999999998888999999999999987    9999999999864322     13456


Q ss_pred             HHHHHHHHhcCCCCcceeHHHHHHHHhc-CccHHHHHHHhhhh
Q 009980          479 KLDEIFDLMDANNDGKVTFDEFRAAMQR-DSSLQDVVLSSLRQ  520 (521)
Q Consensus       479 ~~~~~f~~~D~~~dG~I~~~Ef~~~~~~-~~~~~~~~~~~~~~  520 (521)
                      .+..+|+.+|+|++|+|+.+||..++.. +..+++++++.+++
T Consensus        85 ~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~  127 (146)
T 2qac_A           85 ELIKMFAHFDNNCTGYLTKSQMKNILTTWGDALTDQEAIDALN  127 (146)
T ss_dssp             HHHHHHHTTCTTCSSEEEHHHHHHHHHHSSSCCCHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence            8999999999999999999999999988 78899999998875

>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}

Probab=99.41  E-value=3e-13  Score=122.98  Aligned_cols=115  Identities=18%  Similarity=0.284  Sum_probs=95.8

Q ss_pred             chHHHHHHHHcCCCCcceeHHHHHHHHhhccC--CCcHHHHHHHh-------HhhccCCCcceeHHHHHHHHH-------
Q 009980          400 PLAPRIFDLFDNNRDGTVDMREILCGFSSLRK--SQGDDALRLCF-------QMYDIDRSGCITKEEVASMLR-------  463 (521)
Q Consensus       400 ~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~--~~~~~~l~~~f-------~~~D~d~~G~I~~~e~~~~l~-------  463 (521)
                      ..+.++|..+|.|++|.|+.+||..++..++.  .++.+++..+|       +.+|.|++|.|+++||..++.       
T Consensus        36 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~l~~~~~~lf~~~D~d~dg~i~~~EF~~~~~~~~~~~~  115 (208)
T 2hpk_A           36 SRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNATDEQVEKMRDAVRVFFLHKGVEPVNGLLREDWVEANRVFAEAER  115 (208)
T ss_dssp             CHHHHHHHHHCTTCSSEECHHHHTHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCBTTTBEEGGGHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhhhhh
Confidence            46789999999999999999999999988776  77888898888       999999999999999999876       


Q ss_pred             --hCCCCCCCCCCCChhH-HHHHHHHhcCCCCcceeHHHHHHHHhcCccHHHHHHHhhhh
Q 009980          464 --ALPDDCLPVDITEPGK-LDEIFDLMDANNDGKVTFDEFRAAMQRDSSLQDVVLSSLRQ  520 (521)
Q Consensus       464 --~~~~~~~~~~~~~~~~-~~~~f~~~D~~~dG~I~~~Ef~~~~~~~~~~~~~~~~~~~~  520 (521)
                        .+...     ....++ +..+|+.+|.|+||.|+.+||..++.... +++++++.+++
T Consensus       116 ~~~~~~~-----~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g-~~~~~~~~~~~  169 (208)
T 2hpk_A          116 ERERRGE-----PSLIALLSNSYYDVLDDDGDGTVDVDELKTMMKAFD-VPQEAAYTFFE  169 (208)
T ss_dssp             HHHHTTC-----CCHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTT-SCTTHHHHHHH
T ss_pred             hhhccCC-----hHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhC-cCHHHHHHHHH
Confidence              32211     022233 78899999999999999999999998733 77777777764

>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}

Probab=99.41  E-value=3.9e-13  Score=126.47  Aligned_cols=132  Identities=21%  Similarity=0.237  Sum_probs=107.8

Q ss_pred             CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCC-CCcceeHHHHHHHHhhcc-CCCcHHHHHHHhHhhccCCCcceeHHHH
Q 009980          381 ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNN-RDGTVDMREILCGFSSLR-KSQGDDALRLCFQMYDIDRSGCITKEEV  458 (521)
Q Consensus       381 i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~-~~g~I~~~ef~~~~~~~~-~~~~~~~l~~~f~~~D~d~~G~I~~~e~  458 (521)
                      ++.+++..++...+  .+.+++..+|+.||.+ ++|.|+++||..++..++ .......+..+|+.+|.|++|.|+++||
T Consensus        74 l~~e~l~~l~~~~~--~s~~ei~~l~~~fd~~~~~G~I~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef  151 (256)
T 2jul_A           74 HQPEGLDQLQAQTK--FTKKELQSLYRGFKNECPTGLVDEDTFKLIYSQFFPQGDATTYAHFLFNAFDADGNGAIHFEDF  151 (256)
T ss_dssp             --CTHHHHHHHHTT--SCHHHHHHHHHHHHHHCTTSSEEHHHHHHHHHHHCCSSCCHHHHHHHHHHSSCSCCSEECSHHH
T ss_pred             CCHHHHHHHHHHhC--CCHHHHHHHHHHHHhhCCCCcCCHHHHHHHHHHHcccCCcHHHHHHHHHHhccCCCCcCcHHHH
Confidence            66677777777654  4567888899999875 899999999999998875 4566778999999999999999999999


Q ss_pred             HHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc-----C--------ccHHHHHHHhhhh
Q 009980          459 ASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR-----D--------SSLQDVVLSSLRQ  520 (521)
Q Consensus       459 ~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~-----~--------~~~~~~~~~~~~~  520 (521)
                      ..++..++..      ..++++..+|+.+|.|+||+|+++||..++..     +        +.+++++++.+++
T Consensus       152 ~~~l~~~~~~------~~~~~l~~~F~~~D~d~dG~I~~~Ef~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~  220 (256)
T 2jul_A          152 VVGLSILLRG------TVHEKLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQ  220 (256)
T ss_dssp             HHHHHHHHSC------CHHHHHHHHHHHTCCSSSSCBCHHHHHHHHHHHHHHCCCCCSCCSCCCCHHHHHHHHHH
T ss_pred             HHHHHHHhcc------ChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCCcccchhhHHHHHHHHHH
Confidence            9999876433      45678999999999999999999999999875     1        3457788877764

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.41  E-value=5.2e-13  Score=138.57  Aligned_cols=115  Identities=22%  Similarity=0.354  Sum_probs=98.9

Q ss_pred             chHHHHHHHHcCCCCcceeHHHHHHHHhhc--------cCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCC
Q 009980          400 PLAPRIFDLFDNNRDGTVDMREILCGFSSL--------RKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLP  471 (521)
Q Consensus       400 ~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~--------~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~  471 (521)
                      .+++++|+.+|.|+||.|+++||..++..+        +....++++..+|+.+|.|++|.|+++||..++......   
T Consensus       355 ~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~~---  431 (504)
T 3q5i_A          355 KELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCMDKQIL---  431 (504)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHC--CCSCCCHHHHHHHHHHHHCTTCSSSEEHHHHHHHHSCHHHH---
T ss_pred             HHHHHHHHeeCCCCCCeEcHHHHHHHHHHhhhcccccccccccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhhhcc---
Confidence            467899999999999999999999998876        345678899999999999999999999999987643211   


Q ss_pred             CCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhcCccHHHHHHHhhhhC
Q 009980          472 VDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDSSLQDVVLSSLRQQ  521 (521)
Q Consensus       472 ~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~~~~~~~~~~~~~~~~  521 (521)
                         ..++.+..+|+.+|.|+||+|+.+||..++.. ..++++++++|+++
T Consensus       432 ---~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~-~~~~~~~~~~~~~~  477 (504)
T 3q5i_A          432 ---FSEERLRRAFNLFDTDKSGKITKEELANLFGL-TSISEKTWNDVLGE  477 (504)
T ss_dssp             ---TCHHHHHHHHHHHCTTCCSEECHHHHHHHTTC-SCCCHHHHHHHHHT
T ss_pred             ---cCHHHHHHHHHHhcCCCCCcCcHHHHHHHHhh-CCCCHHHHHHHHHH
Confidence               34568999999999999999999999999987 55788899888763

>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}

Probab=99.41  E-value=2.8e-13  Score=115.14  Aligned_cols=111  Identities=18%  Similarity=0.270  Sum_probs=97.5

Q ss_pred             hHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHH
Q 009980          401 LAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKL  480 (521)
Q Consensus       401 ~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~  480 (521)
                      .+.++|..+|.|++|.|+.+||..++..++...+..++..+|..    ++|.|+++||..++......     ....+.+
T Consensus         8 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~----~~g~i~~~eF~~~~~~~~~~-----~~~~~~l   78 (143)
T 3j04_B            8 EFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSE----APGPINFTMFLTMFGEKLNG-----TDPEDVI   78 (143)
T ss_dssp             HHHHHHTTTCSSCTTCCCHHHHHHHHHHTSCCCCHHHHHTTTTT----SSSCCCHHHHHHHHHHTTTS-----SCCHHHH
T ss_pred             HHHHHHHHhCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHh----CCCCcCHHHHHHHHHHHhcc-----CCcHHHH
Confidence            56788999999999999999999999999888888888888776    89999999999999864332     1345689


Q ss_pred             HHHHHHhcCCCCcceeHHHHHHHHhc-CccHHHHHHHhhhh
Q 009980          481 DEIFDLMDANNDGKVTFDEFRAAMQR-DSSLQDVVLSSLRQ  520 (521)
Q Consensus       481 ~~~f~~~D~~~dG~I~~~Ef~~~~~~-~~~~~~~~~~~~~~  520 (521)
                      ..+|+.+|.|++|+|+.+||..++.. +..+++++++.+++
T Consensus        79 ~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~  119 (143)
T 3j04_B           79 RNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYR  119 (143)
T ss_dssp             HHHHTTSCSSSCCCCCTTTHHHHHHTSSSCCCHHHHHHHHH
T ss_pred             HHHHHHHCCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHH
Confidence            99999999999999999999999998 88899999988875

>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3

Probab=99.40  E-value=5.8e-13  Score=147.30  Aligned_cols=140  Identities=18%  Similarity=0.236  Sum_probs=101.1

Q ss_pred             HHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccC-----------
Q 009980          364 IQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRK-----------  431 (521)
Q Consensus       364 ~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~-----------  431 (521)
                      +.+++.+|+.+|.|++| |+.+||..+|+.+|...+.+++..+|..+| |++|.|+|+||+.++.....           
T Consensus       606 ~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~l~~~~~~~l~~~~d-d~dg~I~~~eF~~~~~~~~~l~~~F~~~D~d  684 (900)
T 1qxp_A          606 IRNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVARFA-DDELIIDFDNFVRCLVRLEILFKIFKQLDPE  684 (900)
T ss_dssp             HHHHHHHHGGGCTTCCSCCBHHHHHHHHHHTTEECCHHHHHHHHHHTS-CSSSBCCHHHHHHHHHHHHHHHHHHHHSCSS
T ss_pred             HHHHHHHHHhhCCCCCCeECHHHHHHHHHHhCCCCCHHHHHHHHHHhC-CCCCeEcHHHHHHHHHHHHHHHHHHHhhCCC
Confidence            36789999999999999 999999999999998888889999999999 99999999999988754200           


Q ss_pred             ------------------------------------------CCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCC
Q 009980          432 ------------------------------------------SQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDC  469 (521)
Q Consensus       432 ------------------------------------------~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~  469 (521)
                                                                ......++.+|+.+|.+ +|.|+.+||..++..++...
T Consensus       685 ~~G~It~~~~efl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~-~G~Is~~El~~~L~~~~~~~  763 (900)
T 1qxp_A          685 NTGTIQLDLISWLSFSVLGKLAAAIEHHHHHHMHYSNIEANESEEERQFRKLFVQLAGD-DMEVSATELMNILNKVVTRH  763 (900)
T ss_dssp             CCSCEEEEHHHHHHHTCC--------------CCCCCC--------------CCCCTTC-SSCBCHHHHTTTSCC----C
T ss_pred             CCceEEecHHHHHHHhhhccccccccccccccccccCCCCCChHHHHHHHHHHHHhcCC-CCccCHHHHHHHHHHhcccc
Confidence                                                      00012234445555544 55556777776665543210


Q ss_pred             C--CCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHh
Q 009980          470 L--PVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQ  505 (521)
Q Consensus       470 ~--~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~  505 (521)
                      .  .....+.+.++.+|+.+|.|+||.|+|+||..++.
T Consensus       764 ~~~~~~~~s~~~~~~l~~~~D~d~dG~Is~~EF~~l~~  801 (900)
T 1qxp_A          764 PDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWN  801 (900)
T ss_dssp             CSCC--CCCHHHHHHHHHHHCCSSSSSBCSHHHHHHHH
T ss_pred             cccccCCCCHHHHHHHHHHHCCCCCCeECHHHHHHHHH
Confidence            0  01124567899999999999999999999999874

>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A

Probab=99.39  E-value=8.1e-13  Score=122.03  Aligned_cols=112  Identities=16%  Similarity=0.296  Sum_probs=95.1

Q ss_pred             HHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhc------------cCC
Q 009980          366 NLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSL------------RKS  432 (521)
Q Consensus       366 ~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~------------~~~  432 (521)
                      .+..+|..+|.|++| |+.+||..++..+......+.+..+|+.+|.|++|.|+++||..++..+            +..
T Consensus       103 ~~~~lf~~~D~d~~G~I~~~Ef~~~l~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~~  182 (229)
T 3dd4_A          103 YAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKED  182 (229)
T ss_dssp             HHHHHHHTTCSSCCSSCCHHHHHHHHHHHHHSCHHHHHHHHHHHHCTTCSSCCBHHHHHHHHHHHHHHCC----------
T ss_pred             HHHHHHHHcCCCCCCeEeHHHHHHHHHHHcCCChHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHHHHhccccCCCcchh
Confidence            467889999999999 9999999999887655566789999999999999999999999998875            334


Q ss_pred             CcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcC
Q 009980          433 QGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDA  489 (521)
Q Consensus       433 ~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~  489 (521)
                      .+++.+..+|+.+|.|+||.|+++||..++..            ...+..+|+.+|.
T Consensus       183 ~~~~~~~~~f~~~D~d~dG~Is~~EF~~~~~~------------~~~~~~~~~~~D~  227 (229)
T 3dd4_A          183 APRQHVETFFQKMDKNKDGVVTIDEFIESCQK------------DENIMRSMQLFEN  227 (229)
T ss_dssp             -CCTHHHHHHHHHCSSCSSBCCHHHHHHHHHT------------CHHHHHHHHHHTT
T ss_pred             hHHHHHHHHHHHhcCCCCCcEeHHHHHHHHHh------------CHHHHHHHHhccc
Confidence            45678999999999999999999999999974            1368888988874

>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B

Probab=99.39  E-value=1.5e-12  Score=113.77  Aligned_cols=111  Identities=14%  Similarity=0.228  Sum_probs=96.6

Q ss_pred             hHHHHHHHHcCCCCcceeHHHHHHHHhhccC-CCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhH
Q 009980          401 LAPRIFDLFDNNRDGTVDMREILCGFSSLRK-SQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGK  479 (521)
Q Consensus       401 ~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~-~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~  479 (521)
                      .+..+|..+|.|++|.|+.+||..++..++. ..+..++..+|+..    +|.|+++||..++......     ....+.
T Consensus        26 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~l~~~~----dg~i~~~eF~~~~~~~~~~-----~~~~~~   96 (166)
T 2mys_B           26 DFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEA----SGPINFTVFLTMFGEKLKG-----ADPEDV   96 (166)
T ss_pred             HHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHC----CCCcCHHHHHHHHHHHhcc-----CCcHHH
Confidence            5678999999999999999999999999888 88888899888864    7999999999988764322     134568


Q ss_pred             HHHHHHHhcCCCCcceeHHHHHHHHhc-CccHHHHHHHhhhh
Q 009980          480 LDEIFDLMDANNDGKVTFDEFRAAMQR-DSSLQDVVLSSLRQ  520 (521)
Q Consensus       480 ~~~~f~~~D~~~dG~I~~~Ef~~~~~~-~~~~~~~~~~~~~~  520 (521)
                      +..+|+.+|.|++|+|+.+||..++.. +..+++++++.+++
T Consensus        97 l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~  138 (166)
T 2mys_B           97 IMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWA  138 (166)
T ss_pred             HHHHHHHhCCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHH
Confidence            999999999999999999999999988 78899999998875

>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L

Probab=99.39  E-value=7.4e-13  Score=141.96  Aligned_cols=127  Identities=18%  Similarity=0.212  Sum_probs=112.6

Q ss_pred             CCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHH
Q 009980          358 DLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDD  436 (521)
Q Consensus       358 ~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~  436 (521)
                      .++.++   +..+|..+|.|++| |+.+||..++..+      +.+..+|+.+|.|++|.|+.+||..++..++...+++
T Consensus       571 ~~s~~~---~~~l~~~~D~d~~G~I~f~EF~~l~~~~------~~l~~~F~~~D~d~dG~Is~~El~~~L~~~G~~ls~~  641 (714)
T 3bow_A          571 GFSIET---CKIMVDMLDEDGSGKLGLKEFYILWTKI------QKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPCQ  641 (714)
T ss_dssp             CCCHHH---HHHHHHHHCCSSCSSBCHHHHHHHHHHH------HHHHHHHHHHCTTCCSSEEHHHHHHHHHHTTEECCHH
T ss_pred             CCCHHH---HHHHHHHhCCCCCCcCcHHHHHHHHHHH------HHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCCCCHH
Confidence            455554   46678899999999 9999999998875      6789999999999999999999999999888778889


Q ss_pred             HHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          437 ALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       437 ~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      ++..+|+.+| |++|.|+++||..++...            +.+..+|+.+|+|++|.|+++|+..++..
T Consensus       642 ~~~~l~~~~D-d~dG~Isf~EF~~~l~~~------------~~l~~~F~~~D~d~dG~Is~~el~~l~~~  698 (714)
T 3bow_A          642 LHQVIVARFA-DDELIIDFDNFVRCLVRL------------EILFKIFKQLDPENTGTIQLDLISWLSFS  698 (714)
T ss_dssp             HHHHHHHHHS-CTTCEECHHHHHHHHHHH------------HHHHHHHSSSCSSCCSEEEEEHHHHHHHH
T ss_pred             HHHHHHHHhC-CCCCeEcHHHHHHHHHHH------------HHHHHHHHHhCCCCCCcEEHHHHHHHHHH
Confidence            9999999999 999999999999998752            37889999999999999999999887654

>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}

Probab=99.39  E-value=1.6e-12  Score=117.01  Aligned_cols=110  Identities=15%  Similarity=0.163  Sum_probs=97.8

Q ss_pred             hHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHH
Q 009980          401 LAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKL  480 (521)
Q Consensus       401 ~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~  480 (521)
                      .+.++|..+|.|++|.|+.+||..++..++...+..++..+|..+    +|.|+++||..++......     ....+.+
T Consensus        58 ~l~~~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~l~~~~----~g~i~~~eF~~~~~~~~~~-----~~~~~~l  128 (196)
T 3dtp_E           58 EFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEA----PGPINFTMFLTIFGDRIAG-----TDEEDVI  128 (196)
T ss_dssp             HHHHHHHHHCCSCSSBCCHHHHHHHHHTTSCCCCHHHHHHHHTTS----SSCCBHHHHHHHHHHCCCS-----SCCHHHH
T ss_pred             HHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHc----cCCCcHHHHHHHHHHHhcC-----CCcHHHH
Confidence            567899999999999999999999999999888999999998887    7999999999999864332     1345689


Q ss_pred             HHHHHHhcCCCCcceeHHHHHHHHhc-CccHHHHHHHhhhh
Q 009980          481 DEIFDLMDANNDGKVTFDEFRAAMQR-DSSLQDVVLSSLRQ  520 (521)
Q Consensus       481 ~~~f~~~D~~~dG~I~~~Ef~~~~~~-~~~~~~~~~~~~~~  520 (521)
                      ..+|+.+|.|++|+|+.+||..++ . +..+++++++.|++
T Consensus       129 ~~~F~~~D~d~~G~Is~~El~~~l-~~g~~~~~~~~~~l~~  168 (196)
T 3dtp_E          129 VNAFNLFDEGDGKCKEETLKRSLT-TWGEKFSQDEVDQALS  168 (196)
T ss_dssp             HHHHHTTCSSSSCCBHHHHHHHHH-HSSSCCCHHHHHHHHH
T ss_pred             HHHHHHHCCCCCCcCcHHHHHHHH-HcCCCCCHHHHHHHHH
Confidence            999999999999999999999999 7 88899999998875

>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A

Probab=99.38  E-value=7.1e-13  Score=115.55  Aligned_cols=120  Identities=17%  Similarity=0.128  Sum_probs=91.2

Q ss_pred             chHHHHHHHHcCCCCcceeHHHHHHHHh----hccCCCcHHHHH-----------HHhHhhccCCCcceeHHHHHHHHHh
Q 009980          400 PLAPRIFDLFDNNRDGTVDMREILCGFS----SLRKSQGDDALR-----------LCFQMYDIDRSGCITKEEVASMLRA  464 (521)
Q Consensus       400 ~~~~~~f~~~D~~~~g~I~~~ef~~~~~----~~~~~~~~~~l~-----------~~f~~~D~d~~G~I~~~e~~~~l~~  464 (521)
                      ..+.++|..+|.|++|.|+++||..++.    .++..++..++.           .+|+.+|.|++|.|+++||..++..
T Consensus         4 ~~l~~~F~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~   83 (166)
T 3akb_A            4 RRIAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIADRDGDQRITREEFVTGAVK   83 (166)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSSSCEEHHHHHHTHHH
T ss_pred             HHHHHHHhHHcCCCCCCcCHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            4678899999999999999999999753    345555555554           5589999999999999999998775


Q ss_pred             CCCCCCCC-CCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhcCccHHHHHHHhhhh
Q 009980          465 LPDDCLPV-DITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDSSLQDVVLSSLRQ  520 (521)
Q Consensus       465 ~~~~~~~~-~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~~~~~~~~~~~~~~~  520 (521)
                      ........ .....+.+..+|+.+|.|++|.|+.+||..++.... +++++++.+++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~E~~~~l~~~~-~~~~~~~~~~~  139 (166)
T 3akb_A           84 RLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTARALTAFG-VPEDLARQAAA  139 (166)
T ss_dssp             HHHHSHHHHHHHHHHHHHHHHHHHCSSSSSCCBHHHHHHHHHHTT-CCHHHHHHHHH
T ss_pred             HhccCccchHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhC-CCHHHHHHHHH
Confidence            42210000 000023488999999999999999999999998733 77888887764

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.38  E-value=2.9e-13  Score=140.05  Aligned_cols=115  Identities=23%  Similarity=0.368  Sum_probs=97.1

Q ss_pred             chHHHHHHHHcCCCCcceeHHHHHHHHhhccC--------CCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCC
Q 009980          400 PLAPRIFDLFDNNRDGTVDMREILCGFSSLRK--------SQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLP  471 (521)
Q Consensus       400 ~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~--------~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~  471 (521)
                      .+++++|+.+|.|+||.|+++||..++..++.        ..+++++..+|+.+|.|++|.|+++||..++......   
T Consensus       346 ~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~G~I~~~EF~~~~~~~~~~---  422 (494)
T 3lij_A          346 KELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSL---  422 (494)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHTTHHHHSSCCCCC--CHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHSCHHHH---
T ss_pred             HHHHHHHHHhCcCCCCeEcHHHHHHHHHHhcccccccccccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhhhcc---
Confidence            46789999999999999999999999988754        3457889999999999999999999999987543211   


Q ss_pred             CCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhcCccHHHHHHHhhhhC
Q 009980          472 VDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDSSLQDVVLSSLRQQ  521 (521)
Q Consensus       472 ~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~~~~~~~~~~~~~~~~  521 (521)
                         ..++++..+|+.+|+|+||+|+.+||..++.. ..++++++++|+++
T Consensus       423 ---~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~-~~~~~~~~~~~~~~  468 (494)
T 3lij_A          423 ---LSKDKLESAFQKFDQDGNGKISVDELASVFGL-DHLESKTWKEMISG  468 (494)
T ss_dssp             ---TCHHHHHHHHHHHCTTCSSEECHHHHHHHC-C-CSCCCHHHHHHHHT
T ss_pred             ---ccHHHHHHHHHHHCCCCCCcCCHHHHHHHHHh-cCCCHHHHHHHHHH
Confidence               35668999999999999999999999999986 56777888888753

>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}

Probab=99.36  E-value=1.4e-12  Score=102.95  Aligned_cols=72  Identities=19%  Similarity=0.355  Sum_probs=67.8

Q ss_pred             cCCCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHh
Q 009980          356 SHDLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFS  427 (521)
Q Consensus       356 ~~~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~  427 (521)
                      ...++++++.+++++|+.+|.|++| |+.+||+.+|+.+|...+..++.++|+.+|.|+||.|+|+||+.+|.
T Consensus        27 ~~~l~~~~~~el~~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~ei~~l~~~~D~d~dG~I~~~EF~~~m~   99 (100)
T 2lv7_A           27 PVDIPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLLG   99 (100)
T ss_dssp             CCCCCGGGHHHHHHHHHHTCSSCSSCBCHHHHHHHHHHHTCCCCTTTHHHHHHHHCSSCSSSBCHHHHHHHTC
T ss_pred             cccCCHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCeEeHHHHHHHhC
Confidence            4567899999999999999999999 99999999999999999999999999999999999999999998763

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.36  E-value=7.1e-13  Score=136.89  Aligned_cols=114  Identities=20%  Similarity=0.348  Sum_probs=93.2

Q ss_pred             chHHHHHHHHcCCCCcceeHHHHHHHHh----hccCCCc-------HHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCC
Q 009980          400 PLAPRIFDLFDNNRDGTVDMREILCGFS----SLRKSQG-------DDALRLCFQMYDIDRSGCITKEEVASMLRALPDD  468 (521)
Q Consensus       400 ~~~~~~f~~~D~~~~g~I~~~ef~~~~~----~~~~~~~-------~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~  468 (521)
                      ..+.++|+.+|.|+||.|+.+||..++.    ..+...+       ++++..+|+.+|.|++|.|+++||..++......
T Consensus       335 ~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~~~~  414 (484)
T 3nyv_A          335 KELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTL  414 (484)
T ss_dssp             HHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHC----CGGGCSHHHHHHHHHHHHHHHTCCTTSEEEHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCcCCCceEeHHHHHHHHHHHhhhcccccccccccccHHHHHHHHHHhCCCCCCeEeHHHHHHHHHhcccc
Confidence            4678899999999999999999965544    3444445       6789999999999999999999999988654221


Q ss_pred             CCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhcCccHHHHHHHhhhh
Q 009980          469 CLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDSSLQDVVLSSLRQ  520 (521)
Q Consensus       469 ~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~~~~~~~~~~~~~~~  520 (521)
                            .+++++..+|+.+|+|+||+|+.+||..++.. ..+++++++.|++
T Consensus       415 ------~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~-~~~~~~~~~~~~~  459 (484)
T 3nyv_A          415 ------LSRERLERAFRMFDSDNSGKISSTELATIFGV-SDVDSETWKSVLS  459 (484)
T ss_dssp             ------HHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHH-TTCCHHHHHHHHH
T ss_pred             ------CcHHHHHHHHHHHCCCCCCcCCHHHHHHHHHh-cCCCHHHHHHHHH
Confidence                  34568999999999999999999999999987 5577888888875

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.34  E-value=9.3e-13  Score=136.02  Aligned_cols=116  Identities=24%  Similarity=0.365  Sum_probs=80.8

Q ss_pred             chHHHHHHHHcCCCCcceeHHHHHHHHhhc----cCCC----------cHHHHHHHhHhhccCCCcceeHHHHHHHHHhC
Q 009980          400 PLAPRIFDLFDNNRDGTVDMREILCGFSSL----RKSQ----------GDDALRLCFQMYDIDRSGCITKEEVASMLRAL  465 (521)
Q Consensus       400 ~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~----~~~~----------~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~  465 (521)
                      .++.++|+.+|.|+||.|+++||..++...    +...          .++++..+|+.+|.|++|.|+++||..++...
T Consensus       331 ~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~Ef~~~~~~~  410 (486)
T 3mwu_A          331 KQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDGSGSIEYSEFIASAIDR  410 (486)
T ss_dssp             HHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHTCCGGGHHHHTSSCHHHHHHHHHHHHCTTCCSSBCHHHHHHHHSCT
T ss_pred             HHHHHHHHHhCCCCCceeeHHHHHHHHHHhhhhhcccchhcccccchhhHHHHHHHHHHhcCCCCCcCcHHHHHHHHHhh
Confidence            467899999999999999999997665543    3333          37889999999999999999999998877643


Q ss_pred             CCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc-CccHHHHHHHhhhhC
Q 009980          466 PDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR-DSSLQDVVLSSLRQQ  521 (521)
Q Consensus       466 ~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~-~~~~~~~~~~~~~~~  521 (521)
                      ...      ..++++..+|+.+|+|+||+|+.+||..++.. +..+++++++.++++
T Consensus       411 ~~~------~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~g~~~~~~~~~~~~~~  461 (486)
T 3mwu_A          411 TIL------LSRERMERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQ  461 (486)
T ss_dssp             TTT------CCHHHHHHHHHHHCSSCSSSBCSSCC--------------------CC
T ss_pred             hcc------chHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHH
Confidence            322      45678999999999999999999999999998 788999999988763

>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A

Probab=99.34  E-value=3.4e-12  Score=102.94  Aligned_cols=98  Identities=15%  Similarity=0.251  Sum_probs=83.0

Q ss_pred             CCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhc---cCCCc
Q 009980          359 LNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSL---RKSQG  434 (521)
Q Consensus       359 ~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~---~~~~~  434 (521)
                      ++++++   ..+|..+|  ++| |+.+||..++...  ....+.+..+|+.+|.|++|.|+.+||..++..+   +...+
T Consensus         7 ~~~~ei---~~~~~~~D--~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~   79 (109)
T 3fs7_A            7 LSAKDI---ESALSSCQ--AADSFNYKSFFSTVGLS--SKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLT   79 (109)
T ss_dssp             SCHHHH---HHHHHHTC--STTCCCHHHHHHHHTCT--TCCHHHHHHHHHHHSTTCSSSBCHHHHHTTGGGTCTTSCCCC
T ss_pred             CCHHHH---HHHHHhcC--CCCcCcHHHHHHHHhcC--CCcHHHHHHHHHHHCCCCCCeEeHHHHHHHHHHHhcccccCC
Confidence            555555   55577777  678 9999999887642  3345688999999999999999999999999988   67788


Q ss_pred             HHHHHHHhHhhccCCCcceeHHHHHHHHH
Q 009980          435 DDALRLCFQMYDIDRSGCITKEEVASMLR  463 (521)
Q Consensus       435 ~~~l~~~f~~~D~d~~G~I~~~e~~~~l~  463 (521)
                      ++++..+|+.+|.|++|.|+++||..++.
T Consensus        80 ~~~~~~~~~~~D~~~dg~i~~~EF~~~~~  108 (109)
T 3fs7_A           80 SAETKAFLAAGDTDGDGKIGVEEFQSLVK  108 (109)
T ss_dssp             HHHHHHHHHHHCTTCSSSBCHHHHHHHHT
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence            99999999999999999999999998874

>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4

Probab=99.34  E-value=6.7e-12  Score=101.21  Aligned_cols=99  Identities=15%  Similarity=0.262  Sum_probs=84.0

Q ss_pred             CCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhc---cCCCc
Q 009980          359 LNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSL---RKSQG  434 (521)
Q Consensus       359 ~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~---~~~~~  434 (521)
                      ++++++   ..+|..+|.  +| |+.+||..++...  ....+.+..+|+.+|.|++|.|+.+||..++..+   +...+
T Consensus         6 ~s~~ei---~~~~~~~d~--~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~g~~~~   78 (109)
T 5pal_A            6 LKADDI---NKAISAFKD--PGTFDYKRFFHLVGLK--GKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLN   78 (109)
T ss_dssp             SCHHHH---HHHHHHTCS--TTCCCHHHHHHHHTCT--TCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCCC
T ss_pred             CCHHHH---HHHHHHhCC--CCcCcHHHHHHHHhhc--cCcHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHHHcCCCCC
Confidence            555555   555777776  67 9999999887542  3345688999999999999999999999999987   77888


Q ss_pred             HHHHHHHhHhhccCCCcceeHHHHHHHHHh
Q 009980          435 DDALRLCFQMYDIDRSGCITKEEVASMLRA  464 (521)
Q Consensus       435 ~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~  464 (521)
                      ++++..+|+.+|.|++|.|+++||..++..
T Consensus        79 ~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~  108 (109)
T 5pal_A           79 DTETKALLAAGDSDHDGKIGADEFAKMVAQ  108 (109)
T ss_dssp             HHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence            999999999999999999999999998864

>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A

Probab=99.33  E-value=2.6e-12  Score=116.74  Aligned_cols=134  Identities=17%  Similarity=0.140  Sum_probs=99.7

Q ss_pred             CCHHHHHHHHHhcCCCCC-cchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHH
Q 009980          381 ATLSEFEEVLKAMNMSSL-VPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVA  459 (521)
Q Consensus       381 i~~~el~~~l~~~~~~~~-~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~  459 (521)
                      ++.+++..+.+..+.... ...+.++|..+|.|++|.|+.+||..++ .++..+..   ..+|+.+|.|++|.|+++||.
T Consensus         9 l~~~~~~~l~~~~~ls~~~~~~l~~~F~~~D~d~dG~Is~~El~~~~-~lg~~~~~---~~l~~~~d~~~~g~i~~~EF~   84 (208)
T 2ct9_A            9 LRDEELEEIKKETGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIP-ELAINPLG---DRIINAFFSEGEDQVNFRGFM   84 (208)
T ss_dssp             CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCTTCSSEECTGGGGGCH-HHHTSTTH---HHHHHTTSCTTCSCEEHHHHH
T ss_pred             CCHHHHHHHHHcCCCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHH-HcCCCCcH---HHHHHHHcCCCCCcCcHHHHH
Confidence            556666666555443321 1246778999999999999999998854 45544443   457889999999999999999


Q ss_pred             HHHHhCCCCCCCC----------CCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc--CccHHHHHHHhh
Q 009980          460 SMLRALPDDCLPV----------DITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR--DSSLQDVVLSSL  518 (521)
Q Consensus       460 ~~l~~~~~~~~~~----------~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~--~~~~~~~~~~~~  518 (521)
                      .++..........          .....+.+..+|+.+|.|+||+|+.+||..++..  +..+++++++.+
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~s~~~~~~l  155 (208)
T 2ct9_A           85 RTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSI  155 (208)
T ss_dssp             HHHHTTSCCC-----------CCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHSCTTCCHHHHHHH
T ss_pred             HHHHhhccccchhhhcccccccccccHHHHHHHHHHHHCCCCCCEEcHHHHHHHHHHHhCCCCCHHHHHHH
Confidence            9998653210000          0014567999999999999999999999999986  778888888876

>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}

Probab=99.33  E-value=2.3e-12  Score=101.69  Aligned_cols=65  Identities=29%  Similarity=0.545  Sum_probs=59.4

Q ss_pred             HHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHh
Q 009980          435 DDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQ  505 (521)
Q Consensus       435 ~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~  505 (521)
                      .++++.+|+.||+|++|+|+.+||+.++..+|..      .++++++.+|+.+|.|+||.|+|+||+.+|.
T Consensus        35 ~~el~~~F~~~D~d~~G~I~~~El~~~l~~lg~~------~~~~ei~~l~~~~D~d~dG~I~~~EF~~~m~   99 (100)
T 2lv7_A           35 LEEIREAFKVFDRDGNGFISKQELGTAMRSLGYM------PNEVELEVIIQRLDMDGDGQVDFEEFVTLLG   99 (100)
T ss_dssp             HHHHHHHHHHTCSSCSSCBCHHHHHHHHHHHTCC------CCTTTHHHHHHHHCSSCSSSBCHHHHHHHTC
T ss_pred             HHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCC------CCHHHHHHHHHHHCCCCCCeEeHHHHHHHhC
Confidence            3579999999999999999999999999998765      5667899999999999999999999999874

>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5

Probab=99.32  E-value=8.2e-13  Score=101.83  Aligned_cols=85  Identities=24%  Similarity=0.404  Sum_probs=69.1

Q ss_pred             CCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCC
Q 009980          412 NRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANN  491 (521)
Q Consensus       412 ~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~  491 (521)
                      |++|.|+|+|++  +...........++.+|+.+|.|++|+|+.+||..++..++..      .+++++..+|+.+|.|+
T Consensus         1 ~~~G~i~~~e~~--~~~~l~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~------~~~~~~~~l~~~~d~~~   72 (87)
T 1s6j_A            1 HSSGHIDDDDKH--MAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSE------LMESEIKDLMDAADIDK   72 (87)
T ss_dssp             CCSSSSSSHHHH--SSSSSCSSSTTTTTTHHHHHCTTCSSCEEHHHHHHHHHTTTSS------CCHHHHHHHHHHHCTTC
T ss_pred             CCCCccCccHHH--HHHHCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCC------CCHHHHHHHHHHhCCCC
Confidence            578999999932  3321122233568899999999999999999999999988754      56789999999999999


Q ss_pred             CcceeHHHHHHHH
Q 009980          492 DGKVTFDEFRAAM  504 (521)
Q Consensus       492 dG~I~~~Ef~~~~  504 (521)
                      +|.|+|+||..++
T Consensus        73 ~g~i~~~eF~~~~   85 (87)
T 1s6j_A           73 SGTIDYGEFIAAT   85 (87)
T ss_dssp             SSEECHHHHTTCC
T ss_pred             CCcCcHHHHHHHH
Confidence            9999999998765

>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}

Probab=99.32  E-value=1.2e-12  Score=109.99  Aligned_cols=99  Identities=10%  Similarity=0.133  Sum_probs=66.2

Q ss_pred             HHHHHHhhhcCCCC-CCHHHHHHHHHhc-CCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccC-CCcHHHHHHHhH
Q 009980          367 LRIHFRTICANGDN-ATLSEFEEVLKAM-NMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRK-SQGDDALRLCFQ  443 (521)
Q Consensus       367 l~~~F~~~D~~~~g-i~~~el~~~l~~~-~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~-~~~~~~l~~~f~  443 (521)
                      ..++|..+|.|++| |+.+||..++... ........+..+|+.+|.|++|.|+.+||..++..++. ..+++++..+|+
T Consensus         5 ~~~l~~~~D~d~~G~I~~~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~e~~~~~~   84 (135)
T 3h4s_E            5 EKSMLLETTSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQGMVR   84 (135)
T ss_dssp             --------------CCCC-----------CHHHHHHHHHHHHHHHSBTTTTBBCHHHHHHHGGGGTCCCCCHHHHHHHHH
T ss_pred             HHHHHHHHcCCCCCcEeHHHHHHHHHHHccccchHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHH
Confidence            35679999999999 9999998887653 21222457899999999999999999999999999884 888999999999


Q ss_pred             hhccCCCcceeHHHHHHHHHhC
Q 009980          444 MYDIDRSGCITKEEVASMLRAL  465 (521)
Q Consensus       444 ~~D~d~~G~I~~~e~~~~l~~~  465 (521)
                      .+|.|++|.|+++||..++...
T Consensus        85 ~~D~d~dG~I~~~EF~~~~~~~  106 (135)
T 3h4s_E           85 EGDLDGDGALNQTEFCVLMVRL  106 (135)
T ss_dssp             HHCSSCSSSBCHHHHHHHHHHH
T ss_pred             HhCCCCCCCCcHHHHHHHHHHh
Confidence            9999999999999999999763

>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A

Probab=99.31  E-value=5.5e-12  Score=110.87  Aligned_cols=117  Identities=13%  Similarity=0.164  Sum_probs=91.5

Q ss_pred             chHHHHHHHHcCCCCcceeHHHHHHHHhhcc----CCCcHHH-H--------HHHhHhhccCCCcceeHHHHHHHHHhCC
Q 009980          400 PLAPRIFDLFDNNRDGTVDMREILCGFSSLR----KSQGDDA-L--------RLCFQMYDIDRSGCITKEEVASMLRALP  466 (521)
Q Consensus       400 ~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~----~~~~~~~-l--------~~~f~~~D~d~~G~I~~~e~~~~l~~~~  466 (521)
                      ..+.++|+.+|.|++|.|+.+||..++..++    ..++..+ +        ..+|+.+|  ++|.|+++||..++....
T Consensus         6 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~D--~~g~i~~~EF~~~~~~~~   83 (174)
T 1q80_A            6 QKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVA--GGKGIDETTFINSMKEMV   83 (174)
T ss_dssp             HHHHHHHHHHCTTCSSEESHHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHTGGGTT--TTSCEEHHHHHHHHHHHT
T ss_pred             HHHHHHHHhcCCCCCCcEeHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHhcC--CCCeEcHHHHHHHHHHHc
Confidence            3567899999999999999999999998877    6666666 5        46899999  899999999999887653


Q ss_pred             CCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhcCccHHHHHHHhhhh
Q 009980          467 DDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDSSLQDVVLSSLRQ  520 (521)
Q Consensus       467 ~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~~~~~~~~~~~~~~~  520 (521)
                      ... .......+.+..+|+.+|.|++|+|+.+||..++... .+++++++.+++
T Consensus        84 ~~~-~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~-g~~~~~~~~~~~  135 (174)
T 1q80_A           84 KNP-EAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGML-GLDKTMAPASFD  135 (174)
T ss_dssp             TST-TCHHHHHTHHHHHHHHHCTTSSSSBCHHHHHHHHHHH-TCCGGGHHHHHH
T ss_pred             Ccc-cHHHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHc-CCCHHHHHHHHH
Confidence            310 0000123578999999999999999999999999773 256666666653

>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A

Probab=99.30  E-value=1.4e-11  Score=99.31  Aligned_cols=99  Identities=14%  Similarity=0.253  Sum_probs=82.9

Q ss_pred             CCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhc---cCCCc
Q 009980          359 LNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSL---RKSQG  434 (521)
Q Consensus       359 ~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~---~~~~~  434 (521)
                      ++++++   ..+|..+|  ++| |+.+||..++...  ......+..+|+.+|.|++|.|+.+||..++..+   +...+
T Consensus         6 ~t~~e~---~~~~~~~d--~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~   78 (109)
T 1rwy_A            6 LSAEDI---KKAIGAFT--AADSFDHKKFFQMVGLK--KKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLS   78 (109)
T ss_dssp             SCHHHH---HHHHHTTC--STTCCCHHHHHHHHTGG--GSCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCCC
T ss_pred             CCHHHH---HHHHHHcC--CCCcEeHHHHHHHHhcC--cchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHhccCCCCC
Confidence            455554   55577777  677 9999999887532  2335688999999999999999999999999987   66788


Q ss_pred             HHHHHHHhHhhccCCCcceeHHHHHHHHHh
Q 009980          435 DDALRLCFQMYDIDRSGCITKEEVASMLRA  464 (521)
Q Consensus       435 ~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~  464 (521)
                      ++++..+|+.+|.|++|.|+++||..++..
T Consensus        79 ~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~  108 (109)
T 1rwy_A           79 AKETKTLMAAGDKDGDGKIGVEEFSTLVAE  108 (109)
T ss_dssp             HHHHHHHHHHHCTTCSSSEEHHHHHHHHHT
T ss_pred             HHHHHHHHHHHCCCCCCcCCHHHHHHHHHc
Confidence            899999999999999999999999998764

>2kld_A Polycystin-2; PC2, PKD2, calcium binding domain, EF hand, cytosolic, calcium, coiled coil, disease mutation, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kle_A 2kq6_A 2y4q_A

Probab=99.29  E-value=2.9e-13  Score=111.54  Aligned_cols=101  Identities=13%  Similarity=0.212  Sum_probs=52.5

Q ss_pred             HHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHH-----HHhhcc-CCCcHHHHHHHhHhhccCCCcceeHHHHHHHHH
Q 009980          390 LKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILC-----GFSSLR-KSQGDDALRLCFQMYDIDRSGCITKEEVASMLR  463 (521)
Q Consensus       390 l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~-----~~~~~~-~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~  463 (521)
                      |+.+|.+++..++.+++..+    +|.|+|+||+.     ++.... .....++++.+|+.||    |+|+.+||..++.
T Consensus         2 lr~lG~~~t~~ei~~~~~~~----~g~i~f~EF~~~~~~~~~~~~~~~~~~~~~l~~aF~~fD----G~I~~~El~~~l~   73 (123)
T 2kld_A            2 STAIGINDTYSEVKSDLAQQ----KAEMELSDLIRKGYHKALVKLKLKKNTVDDISESLRQGG----GKLNFDELRQDLK   73 (123)
T ss_dssp             -----------------------------------------------------CCSCSSTTTT----TCEEHHHHHHHTT
T ss_pred             hhhcCCCCCHHHHHHHHHHc----CCCccHHHHHhHhHHHHHHHhhcChhHHHHHHHHHHHhC----CCCCHHHHHHHHH
Confidence            57788888888999988866    79999999998     555432 2223356888999999    9999999999998


Q ss_pred             hCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          464 ALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       464 ~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      .+|.        ++++++.+|+.+|.|+||.|+|+||..+|..
T Consensus        74 ~lG~--------t~~ei~~~~~~~D~d~dG~I~~~EF~~~~~~  108 (123)
T 2kld_A           74 GKGH--------TDAEIEAIFTKYDQDGDQELTEHEHQQMRDD  108 (123)
T ss_dssp             TCCS--------SHHHHHHHHHHHSSSSCCEECSHHHHHCSCT
T ss_pred             HhCC--------CHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence            7652        5678999999999999999999999998865

>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A

Probab=99.29  E-value=1.2e-11  Score=99.45  Aligned_cols=98  Identities=16%  Similarity=0.253  Sum_probs=82.0

Q ss_pred             CCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhc---cCCCc
Q 009980          359 LNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSL---RKSQG  434 (521)
Q Consensus       359 ~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~---~~~~~  434 (521)
                      ++++++   ..+|..+|  ++| |+.+||..++...  ......+..+|+.+|.|++|.|+.+||..++..+   +...+
T Consensus         6 ~~~~e~---~~l~~~~d--~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~   78 (108)
T 2pvb_A            6 LKDADV---AAALAACS--AADSFKHKEFFAKVGLA--SKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALT   78 (108)
T ss_dssp             SCHHHH---HHHHHHTC--STTCCCHHHHHHHHTGG--GSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCC
T ss_pred             CCHHHH---HHHHHHhC--CCCcCcHHHHHHHHhCC--hhHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccCCCCC
Confidence            455555   45577777  677 9999999887542  2235678999999999999999999999999987   66788


Q ss_pred             HHHHHHHhHhhccCCCcceeHHHHHHHHH
Q 009980          435 DDALRLCFQMYDIDRSGCITKEEVASMLR  463 (521)
Q Consensus       435 ~~~l~~~f~~~D~d~~G~I~~~e~~~~l~  463 (521)
                      ++++..+|+.+|.|++|.|+++||..++.
T Consensus        79 ~~~~~~~~~~~D~~~dg~i~~~eF~~~~~  107 (108)
T 2pvb_A           79 DAETKAFLADGDKDGDGMIGVDEFAAMIK  107 (108)
T ss_dssp             HHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence            89999999999999999999999998775

>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4

Probab=99.29  E-value=1.3e-11  Score=99.41  Aligned_cols=99  Identities=13%  Similarity=0.209  Sum_probs=82.3

Q ss_pred             CCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhc---cCCC
Q 009980          358 DLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSL---RKSQ  433 (521)
Q Consensus       358 ~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~---~~~~  433 (521)
                      .++.+++.   .+|..+|  ++| |+.+||..++...  ......+..+|+.+|.|++|.|+.+||..++..+   +...
T Consensus         6 ~~~~~e~~---~~~~~~d--~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~   78 (109)
T 1bu3_A            6 ILADADVA---AALKACE--AADSFNYKAFFAKVGLT--AKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARAL   78 (109)
T ss_dssp             SSCHHHHH---HHHHHTC--STTCCCHHHHHHHHTGG--GSCHHHHHHHHHHHCTTCSSSEEHHHHHTHHHHHSTTCCCC
T ss_pred             cCCHHHHH---HHHHHhC--CCCcCcHHHHHHHHHcC--hhhHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCCC
Confidence            35565554   4566777  677 9999999887532  2234678999999999999999999999999988   6778


Q ss_pred             cHHHHHHHhHhhccCCCcceeHHHHHHHHH
Q 009980          434 GDDALRLCFQMYDIDRSGCITKEEVASMLR  463 (521)
Q Consensus       434 ~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~  463 (521)
                      +++++..+|+.+|.|++|.|+++||..++.
T Consensus        79 ~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~  108 (109)
T 1bu3_A           79 TDAETKAFLKAGDSDGDGAIGVDEWAALVK  108 (109)
T ss_dssp             CHHHHHHHHHHHCTTCSSEECHHHHHHHHT
T ss_pred             CHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence            889999999999999999999999998764

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=99.29  E-value=1.7e-11  Score=115.49  Aligned_cols=139  Identities=16%  Similarity=0.105  Sum_probs=99.9

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      ......|.+....+.|..+.||++...   ++..+++|+.....                               ...+.
T Consensus        16 ~~~~~~~~~~~~~~gg~~~~v~~~~~~---~g~~~vlK~~~~~~-------------------------------~~~~~   61 (264)
T 1nd4_A           16 VERLFGYDWAQQTIGCSDAAVFRLSAQ---GRPVLFVKTDLSGA-------------------------------LNELQ   61 (264)
T ss_dssp             TTTTTTCEEEECSCTTSSCEEEEEECT---TSCCEEEEEECSCT-------------------------------TSCHH
T ss_pred             HHhcCCCceEecccCCCCceEEEEecC---CCCeEEEEeCCccc-------------------------------chhhh
Confidence            344556777665556777999999653   46679999974320                               12377


Q ss_pred             HHHHHHHHHhhccCCC-CCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--
Q 009980           86 NEILVMRKIVENVSPH-PNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQAN--  162 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~h-pniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~--  162 (521)
                      .|+.+++.+.    .| -.+++++.+...++..|+||||++|.+|.  .   ....   ...++.++...|..||+..  
T Consensus        62 ~E~~~l~~l~----~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~--~---~~~~---~~~~~~~l~~~l~~lh~~~~~  129 (264)
T 1nd4_A           62 DEAARLSWLA----TTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL--S---SHLA---PAEKVSIMADAMRRLHTLDPA  129 (264)
T ss_dssp             HHHHHHHHHH----TTTCCBCCEEEEEECSSCEEEEEECCSSEETT--T---SCCC---HHHHHHHHHHHHHHHTTSCGG
T ss_pred             HHHHHHHHHH----hCCCCCCeEEEeccCCCCCEEEEEecCCcccC--c---CcCC---HhHHHHHHHHHHHHHhCCCCC
Confidence            8999999882    23 22677899888888899999999998883  1   1122   2356677777788887643  


Q ss_pred             --------------------------------------------------------CeeccCCCCcEEEeeCCCCCCEEE
Q 009980          163 --------------------------------------------------------IVHRDLKPENCLFLNDREDSPLKI  186 (521)
Q Consensus       163 --------------------------------------------------------i~H~dlkp~Nil~~~~~~~~~~kl  186 (521)
                                                                              ++|+|++|.||++   +.+..+.|
T Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~---~~~~~~~l  206 (264)
T 1nd4_A          130 TCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMV---ENGRFSGF  206 (264)
T ss_dssp             GCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEE---ETTEEEEE
T ss_pred             CCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEE---ECCcEEEE
Confidence                                                                    9999999999999   44445679


Q ss_pred             eecCCCc
Q 009980          187 MDFGLSS  193 (521)
Q Consensus       187 ~Dfg~a~  193 (521)
                      +|||.+.
T Consensus       207 iD~~~a~  213 (264)
T 1nd4_A          207 IDCGRLG  213 (264)
T ss_dssp             CCCTTCE
T ss_pred             Ecchhcc
Confidence            9999875

>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A

Probab=99.26  E-value=2.6e-11  Score=97.85  Aligned_cols=99  Identities=14%  Similarity=0.258  Sum_probs=81.9

Q ss_pred             CCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhc---cCCCc
Q 009980          359 LNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSL---RKSQG  434 (521)
Q Consensus       359 ~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~---~~~~~  434 (521)
                      ++++++   ..+|..+|  ++| |+.+||..++..  .......+..+|+.+|.|++|.|+.+||..++..+   +...+
T Consensus         7 ~t~~e~---~~~~~~~d--~~g~i~~~ef~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~   79 (110)
T 1pva_A            7 LKADDI---KKALDAVK--AEGSFNHKKFFALVGL--KAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLT   79 (110)
T ss_dssp             SCHHHH---HHHHHHTC--STTCCCHHHHHHHHTC--TTSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCCCC
T ss_pred             CCHHHH---HHHHHhcC--CCCcCcHHHHHHHHcc--CcchHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhhcCCCCC
Confidence            445544   55567777  677 999999988742  12334678999999999999999999999999987   56678


Q ss_pred             HHHHHHHhHhhccCCCcceeHHHHHHHHHh
Q 009980          435 DDALRLCFQMYDIDRSGCITKEEVASMLRA  464 (521)
Q Consensus       435 ~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~  464 (521)
                      ++++..+|+.+|.|++|.|+++||..++..
T Consensus        80 ~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  109 (110)
T 1pva_A           80 DAETKAFLKAADKDGDGKIGIDEFETLVHE  109 (110)
T ss_dssp             HHHHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred             HHHHHHHHHHhCCCCCCeEcHHHHHHHHHh
Confidence            899999999999999999999999998763

>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A

Probab=99.26  E-value=2.3e-11  Score=97.88  Aligned_cols=98  Identities=17%  Similarity=0.234  Sum_probs=81.3

Q ss_pred             CCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhc---cCCCc
Q 009980          359 LNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSL---RKSQG  434 (521)
Q Consensus       359 ~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~---~~~~~  434 (521)
                      +++++++.   +|..+|  ++| |+.+||..++...  ......+..+|+.+|.|++|.|+.+||..++..+   +...+
T Consensus         6 ~t~~e~~~---~~~~~d--~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~   78 (108)
T 1rro_A            6 LSAEDIAA---ALQECQ--DPDTFEPQKFFQTSGLS--KMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELT   78 (108)
T ss_dssp             SCHHHHHH---HHHHTC--STTCCCHHHHHHHHSGG--GSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCCCC
T ss_pred             CCHHHHHH---HHHHcc--CCCCcCHHHHHHHHhcC--cccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhccCCCC
Confidence            56665544   566677  677 9999999887532  2234678999999999999999999999999887   56678


Q ss_pred             HHHHHHHhHhhccCCCcceeHHHHHHHHH
Q 009980          435 DDALRLCFQMYDIDRSGCITKEEVASMLR  463 (521)
Q Consensus       435 ~~~l~~~f~~~D~d~~G~I~~~e~~~~l~  463 (521)
                      ++++..+|+.+|.|++|.|+++||..++.
T Consensus        79 ~~~~~~~~~~~D~~~dg~i~~~eF~~~~~  107 (108)
T 1rro_A           79 ESETKSLMDAADNDGDGKIGADEFQEMVH  107 (108)
T ss_dssp             HHHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHc
Confidence            89999999999999999999999998764

>4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens}

Probab=99.26  E-value=6.3e-12  Score=101.94  Aligned_cols=89  Identities=15%  Similarity=0.288  Sum_probs=70.0

Q ss_pred             HHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHh-----cCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccC---
Q 009980          361 EEEIQNLRIHFRTICANGDN-ATLSEFEEVLKA-----MNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRK---  431 (521)
Q Consensus       361 ~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~-----~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~---  431 (521)
                      ++.+..+..+|+.||.| +| |+..||+.+|+.     ++...+.+++.++++.+|.|+||.|+|+||+..+..+..   
T Consensus        11 E~~ie~l~~~F~~yd~d-dG~Is~~EL~~~l~~~~~~~l~~~~~~~~v~~~i~~~D~d~DG~IdF~EF~~lm~~l~~~~h   89 (121)
T 4drw_A           11 EHAMETMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGLTIACN   89 (121)
T ss_dssp             HHHHHHHHHTTGGGSCT-TCSCCHHHHHHHTTTSCHHHHTTSSCTTHHHHHHHHHCTTCSSCCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCC-CCEEcHHHHHHHHHHHhhhhcccCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHHH
Confidence            45678899999999988 68 999999999987     677788899999999999999999999999998765321   


Q ss_pred             -------------CCcHHHHHHHhHhhccCCC
Q 009980          432 -------------SQGDDALRLCFQMYDIDRS  450 (521)
Q Consensus       432 -------------~~~~~~l~~~f~~~D~d~~  450 (521)
                                   ...+..++.+|+.+|.|||
T Consensus        90 e~f~~~~k~~~~~~~~d~~~~e~~~~~d~~gd  121 (121)
T 4drw_A           90 DYFVVHMKQENLYFQGDSTVHEILSKLSLEGD  121 (121)
T ss_dssp             HHHTTSCC---------CCHHHHHHHCCC---
T ss_pred             HHHHHHHHHhccCCCCchHHHHHHHHhcccCC
Confidence                         0122347788888887765

>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A

Probab=99.25  E-value=1.5e-12  Score=115.95  Aligned_cols=114  Identities=14%  Similarity=0.153  Sum_probs=90.1

Q ss_pred             chHHHHHHHHcCCCCcceeHHHHHHHHhhc------cCCCcHHHHHHH---------hHhhccCCCcceeHHHHHHHHHh
Q 009980          400 PLAPRIFDLFDNNRDGTVDMREILCGFSSL------RKSQGDDALRLC---------FQMYDIDRSGCITKEEVASMLRA  464 (521)
Q Consensus       400 ~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~------~~~~~~~~l~~~---------f~~~D~d~~G~I~~~e~~~~l~~  464 (521)
                      ..+.++|..+|.|++|.|+++||..++..+      +...+.+++..+         |+.+|.|++|.|+++|  .++..
T Consensus        14 ~~l~~~F~~~D~d~dG~i~~~El~~~l~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~f~~~D~d~dg~I~~~E--~~~~~   91 (186)
T 2hps_A           14 RKMKTRMQRVDVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQEFLRVADQLGLAPGVRISVEEAAVNAT--DSLLK   91 (186)
T ss_dssp             HHHHHHHHTTCTTCSSEEEHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHTCCTTCEEEHHHHHHHHH--HHHHH
T ss_pred             HHHHHHhhhcCCCCCCccCHHHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHhcCCCCCCcccHHH--HHHHH
Confidence            357789999999999999999999998765      555566777766         7999999999999999  56655


Q ss_pred             CCCCCCCCCCCChhHHHHHH--HHhcCCCCcceeHHHHHHHHhc-CccHHHHHHHhhhh
Q 009980          465 LPDDCLPVDITEPGKLDEIF--DLMDANNDGKVTFDEFRAAMQR-DSSLQDVVLSSLRQ  520 (521)
Q Consensus       465 ~~~~~~~~~~~~~~~~~~~f--~~~D~~~dG~I~~~Ef~~~~~~-~~~~~~~~~~~~~~  520 (521)
                      .....     ...+++...|  ..+|.|++|+|+++||..++.. +..+++++++.+++
T Consensus        92 ~~~~~-----~~~~~~~~~f~~~~fD~d~~G~I~~~E~~~~l~~~g~~~~~~~~~~~~~  145 (186)
T 2hps_A           92 MKGEE-----KAMAVIQSLIMYDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFN  145 (186)
T ss_dssp             CCTHH-----HHHTTHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHCTTCCHHHHHHHHH
T ss_pred             hcCCh-----HHHHHHHHHHHHHHccCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence            43210     1112444445  7789999999999999999988 77788889888875

>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A

Probab=99.25  E-value=6.3e-12  Score=107.71  Aligned_cols=88  Identities=8%  Similarity=0.148  Sum_probs=72.7

Q ss_pred             HHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHH
Q 009980          361 EEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALR  439 (521)
Q Consensus       361 ~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~  439 (521)
                      .+++.+++.+|..+|.|++| |+.+||..+|+.+|...+.+++..+|+.+|.|++|.|+|+||+.++...     ...+.
T Consensus        46 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~~~D~d~dg~I~~~eF~~~~~~~-----~~~i~  120 (150)
T 2jjz_A           46 PEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMMLGK-----RSAVL  120 (150)
T ss_dssp             HHHHHHHHHHHTTSCCCTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSCSSBCHHHHHHHHHSS-----SCCHH
T ss_pred             HHHHHHHHHHHHHhCCCCcCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHh-----HHHHH
Confidence            57788999999999999999 9999999999999988888999999999999999999999999988754     34589


Q ss_pred             HHhHhhccCCCcce
Q 009980          440 LCFQMYDIDRSGCI  453 (521)
Q Consensus       440 ~~f~~~D~d~~G~I  453 (521)
                      .+|+.||.|++|.-
T Consensus       121 ~aF~~~D~d~~G~~  134 (150)
T 2jjz_A          121 KLVMMFEGKANESS  134 (150)
T ss_dssp             HHHHC---------
T ss_pred             HHHHHHcCCCCCCC
Confidence            99999999999984

>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A

Probab=99.25  E-value=1.2e-12  Score=137.24  Aligned_cols=111  Identities=15%  Similarity=0.250  Sum_probs=46.0

Q ss_pred             chHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhH
Q 009980          400 PLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGK  479 (521)
Q Consensus       400 ~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~  479 (521)
                      ..+.++|+.+|.|++|.|+++||..++..++...++++++.+|+.+|.|++|.|+++||..++..+.         .+++
T Consensus        11 ~~l~~~F~~fD~d~dG~Is~~El~~~l~~lg~~~s~~el~~lf~~~D~d~~G~I~f~EF~~~~~~l~---------~~~e   81 (624)
T 1djx_A           11 HWIHSCLRKADKNKDNKMNFKELKDFLKELNIQVDDGYARKIFRECDHSQTDSLEDEEIETFYKMLT---------QRAE   81 (624)
T ss_dssp             ---------------------------------------------------------CTTHHHHHHT---------CCHH
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHhc---------cHHH
Confidence            4678899999999999999999999999988888888999999999999999999999999998753         2358


Q ss_pred             HHHHHHHhcCCCCcceeHHHHHHHHhc--Ccc-HHHHHHHhhhh
Q 009980          480 LDEIFDLMDANNDGKVTFDEFRAAMQR--DSS-LQDVVLSSLRQ  520 (521)
Q Consensus       480 ~~~~f~~~D~~~dG~I~~~Ef~~~~~~--~~~-~~~~~~~~~~~  520 (521)
                      +..+|+.+|.+ +|+|+++||+++|..  ++. ++++++++||+
T Consensus        82 l~~aF~~fD~~-~G~Is~~EL~~fL~~~qge~~ls~ee~~~ii~  124 (624)
T 1djx_A           82 IDRAFEEAAGS-AETLSVERLVTFLQHQQREEEAGPALALSLIE  124 (624)
T ss_dssp             HHHHHHHHHTT-SSSEEHHHHHHHHHHTSCCSSCSHHHHHHHHH
T ss_pred             HHHHHHHhcCC-CCeecHHHHHHHHHHHhCCCCCCHHHHHHHHH
Confidence            99999999985 999999999999985  565 89999999886

>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*

Probab=99.25  E-value=2.4e-11  Score=107.88  Aligned_cols=108  Identities=17%  Similarity=0.249  Sum_probs=89.6

Q ss_pred             hHHHHHHHHcC-----CC-C--cceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcc-eeHHHHHHHHHhCCCCCCC
Q 009980          401 LAPRIFDLFDN-----NR-D--GTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGC-ITKEEVASMLRALPDDCLP  471 (521)
Q Consensus       401 ~~~~~f~~~D~-----~~-~--g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~-I~~~e~~~~l~~~~~~~~~  471 (521)
                      .+.++|..+|.     |+ +  |.|+.+||.. +..++..+..+   .+|+.+|.|++|. |+++||..++......   
T Consensus        21 ~l~~~F~~~D~~~~~~~~~~~~G~i~~~el~~-l~~~g~~~~~~---~l~~~~D~d~~G~~I~~~EF~~~~~~~~~~---   93 (183)
T 1dgu_A           21 LAHRRFCELLPQEQRSVESSLRAQVPFEQILS-LPELKANPFKE---RICRVFSTSPAKDSLSFEDFLDLLSVFSDT---   93 (183)
T ss_dssp             HHHHHHHHHSCSTTCSSCCCTTTCSCHHHHHT-STTSSSCTTHH---HHHHHHSCSSSSCCCCHHHHHHHHHHHSTT---
T ss_pred             HHHHHHHHhCccccccccccccCcCcHHHHHH-HHhhhcCcHHH---HHHHHhCCCCCCCEecHHHHHHHHHHhcCC---
Confidence            35678999999     68 8  9999999999 87777666543   5788899999999 9999999998865432   


Q ss_pred             CCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc-Cc-----cHHHHHHHh
Q 009980          472 VDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR-DS-----SLQDVVLSS  517 (521)
Q Consensus       472 ~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~-~~-----~~~~~~~~~  517 (521)
                        ...++.+..+|+.+|.|++|+|+.+||..++.. +.     .+++++++.
T Consensus        94 --~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~  143 (183)
T 1dgu_A           94 --ATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQ  143 (183)
T ss_dssp             --CCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHSSSCCCHHHHHHHHH
T ss_pred             --CCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhcccccCCCCHHHHHH
Confidence              123458999999999999999999999999987 44     789888876

>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A

Probab=99.24  E-value=6.2e-12  Score=107.33  Aligned_cols=88  Identities=10%  Similarity=0.199  Sum_probs=77.0

Q ss_pred             HHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHH
Q 009980          361 EEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALR  439 (521)
Q Consensus       361 ~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~  439 (521)
                      .+++.+++.+|..+|.|++| |+.+||..+++.+|...+..++..+|..+|.|++|.|+|+||+.++...     .+.+.
T Consensus        44 ~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~-----~~~~~  118 (147)
T 1wy9_A           44 PSKLEAFKVKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSDFLRMMLGK-----RSAIL  118 (147)
T ss_dssp             HHHHHHHHHHHTTSCCCTTSSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCTTEECHHHHHHHHCSS-----GGGGG
T ss_pred             HHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHh-----HHHHH
Confidence            67888999999999999999 9999999999999998888999999999999999999999999988653     45688


Q ss_pred             HHhHhhccCCCcce
Q 009980          440 LCFQMYDIDRSGCI  453 (521)
Q Consensus       440 ~~f~~~D~d~~G~I  453 (521)
                      .+|+.||.+++|..
T Consensus       119 ~aF~~~D~d~~g~~  132 (147)
T 1wy9_A          119 RMILMYEEKNKEHK  132 (147)
T ss_dssp             GGGGGCCCC-----
T ss_pred             HHHHHHccCCCCCC
Confidence            99999999999985

>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group}

Probab=99.24  E-value=3.2e-11  Score=106.63  Aligned_cols=126  Identities=18%  Similarity=0.231  Sum_probs=95.5

Q ss_pred             HHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhc---cCCCcceeHHHHH
Q 009980          383 LSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYD---IDRSGCITKEEVA  459 (521)
Q Consensus       383 ~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D---~d~~G~I~~~e~~  459 (521)
                      .+++..+-+.... ....++.+.|..+|  ++|.|+.+||..++   +..+++..+..+|+.+|   .+++|.|+++||.
T Consensus        12 ~~~l~~~~~~~~~-~~~~~~~~~F~~~D--~dG~I~~~el~~~l---g~~~~~~~~~~i~~~~d~~~~~~~~~i~~~ef~   85 (179)
T 3a8r_A           12 LKGLQFVTAKVGN-DGWAAVEKRFNQLQ--VDGVLLRSRFGKCI---GMDGSDEFAVQMFDSLARKRGIVKQVLTKDELK   85 (179)
T ss_dssp             HHHHHHHHHHHCC-CCHHHHHHHHHHHC--BTTBEEGGGHHHHH---TCCSCHHHHHHHHHHHHHHHTCCSSEECHHHHH
T ss_pred             HHHHHHHHhccch-hhHHHHHHHHhccC--CCCCCcHHHHHHHH---CCCCcHHHHHHHHHHHHHhccCCCCCcCHHHHH
Confidence            3444444333322 22346788899999  79999999999865   44566777888888887   4678999999999


Q ss_pred             HHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHh-c-Ccc-H------HHHHHHhhhh
Q 009980          460 SMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQ-R-DSS-L------QDVVLSSLRQ  520 (521)
Q Consensus       460 ~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~-~-~~~-~------~~~~~~~~~~  520 (521)
                      .++..+...      ...+++..+|+.+|+|+||+|+.+||..++. . +.+ +      ++++++.|++
T Consensus        86 ~~~~~~~~~------~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~~~~~~~~~~~~~~~~~  149 (179)
T 3a8r_A           86 DFYEQLTDQ------GFDNRLRTFFDMVDKNADGRLTAEEVKEIIALSASANKLSKIKERADEYTALIME  149 (179)
T ss_dssp             HHHHHHHCC------CHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHcCC------CHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccccccccccchHHHHHHHHH
Confidence            987764321      2456899999999999999999999999997 4 444 5      8888888875

>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi}

Probab=99.24  E-value=1e-13  Score=127.20  Aligned_cols=114  Identities=20%  Similarity=0.222  Sum_probs=85.0

Q ss_pred             hHHHHHHHHcCCCCcceeHHHHHHHHhh-ccCCCcHHHHHH----HhHh----h-ccCCCcceeHHHHHHHHHhCCCCCC
Q 009980          401 LAPRIFDLFDNNRDGTVDMREILCGFSS-LRKSQGDDALRL----CFQM----Y-DIDRSGCITKEEVASMLRALPDDCL  470 (521)
Q Consensus       401 ~~~~~f~~~D~~~~g~I~~~ef~~~~~~-~~~~~~~~~l~~----~f~~----~-D~d~~G~I~~~e~~~~l~~~~~~~~  470 (521)
                      .+.++|..+|.|++|.|+++||..++.. ++...+..++..    +|..    + |.|++|.|+++||..++......  
T Consensus        49 ~l~~~F~~~D~d~dG~I~~~El~~~l~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~I~~~EF~~~~~~~~~~--  126 (219)
T 3cs1_A           49 RRIELFKKFDKNETGKLCYDEVYSGCLEVLKLDEFTSRVRDITKRAFDKSRTLGSKLENKGSEDFVEFLEFRLMLCYI--  126 (219)
T ss_dssp             HHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCGGGTCSCHHHHHHHHHHHHHHHHHHHHTSCCCSSBCHHHHHHHHHHH--
T ss_pred             HHHHHHHHhCCCCCCcCcHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHhhhhccCCCCcCCHHHHHHHHHHHhcc--
Confidence            4678999999999999999999998876 555444333433    3332    2 34899999999999876532110  


Q ss_pred             CCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc-Cc-cHHHHHHHhhhh
Q 009980          471 PVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR-DS-SLQDVVLSSLRQ  520 (521)
Q Consensus       471 ~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~-~~-~~~~~~~~~~~~  520 (521)
                          ...+.+..+|+.+|.|++|+|+.+||..++.. +. .+++++++.+++
T Consensus       127 ----~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~e~~~l~~  174 (219)
T 3cs1_A          127 ----YDFFELTVMFDEIDASGNMLVDEEEFKRAVPKLEAWGAKVEDPAALFK  174 (219)
T ss_dssp             ----HHHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHHHHHTCCCSCHHHHHH
T ss_pred             ----chHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhcccCCCHHHHHHHHH
Confidence                12457899999999999999999999999976 43 566666666654

>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C

Probab=99.22  E-value=7e-12  Score=106.37  Aligned_cols=95  Identities=17%  Similarity=0.157  Sum_probs=50.2

Q ss_pred             HHHHHhhhcCCCC-CCHHHHHHHHHhcCC-----CCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhcc--------CCC
Q 009980          368 RIHFRTICANGDN-ATLSEFEEVLKAMNM-----SSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLR--------KSQ  433 (521)
Q Consensus       368 ~~~F~~~D~~~~g-i~~~el~~~l~~~~~-----~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~--------~~~  433 (521)
                      ...|..+|.|++| |+.+||..++..+..     ....+.+..+|+.+|.|++|.|+++||..++..+.        ...
T Consensus        30 ~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~g~~~  109 (143)
T 3a4u_B           30 FSQPGSMGLDKNTVHDQEHIMEHLEGVINKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLM  109 (143)
T ss_dssp             ---------------------------------CCCHHHHHHHHHHHTCTTCSSCEEHHHHHHTCC-------------C
T ss_pred             HHHHHHhCCCCCCcCcHHHHHHHHHHHhcccccccCHHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHhhhccccCCCC
Confidence            4679999999999 999999988876521     12235688899999999999999999999988763        245


Q ss_pred             cHHHH----HHHhHhhccCCCcceeHHHHHHHH
Q 009980          434 GDDAL----RLCFQMYDIDRSGCITKEEVASML  462 (521)
Q Consensus       434 ~~~~l----~~~f~~~D~d~~G~I~~~e~~~~l  462 (521)
                      +.+++    ..+|+.+|.|++|.|+++||..++
T Consensus       110 s~~e~~~~~~~~f~~~D~d~dG~Is~~EF~~~~  142 (143)
T 3a4u_B          110 SEDELINIIDGVLRDDDKNNDGYIDYAEFAKSL  142 (143)
T ss_dssp             CHHHHHHHHHHHHHHHCTTCSSEECHHHHHC--
T ss_pred             CHHHHHHHHHHHHHHcCCCCCCcEeHHHHHHHH
Confidence            55555    556699999999999999998764

>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}

Probab=99.21  E-value=6.6e-11  Score=92.06  Aligned_cols=85  Identities=18%  Similarity=0.253  Sum_probs=73.6

Q ss_pred             CCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCC---c
Q 009980          359 LNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQ---G  434 (521)
Q Consensus       359 ~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~---~  434 (521)
                      .++++..+++.+|+.+|.|++| |+.+||..+++.+|...+.+++..+|..+|.|++|.|+|+||+.++.......   .
T Consensus         3 ~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~~~   82 (92)
T 2kn2_A            3 MDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMTVRGGGGGNG   82 (92)
T ss_dssp             CCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCCSSEEHHHHHHHHHHHTTTCCCHH
T ss_pred             CCccHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhccCCCCCch
Confidence            4567788999999999999999 99999999999999988889999999999999999999999999887654332   3


Q ss_pred             HHHHHHHhH
Q 009980          435 DDALRLCFQ  443 (521)
Q Consensus       435 ~~~l~~~f~  443 (521)
                      .++++.+|+
T Consensus        83 ~~~l~~aF~   91 (92)
T 2kn2_A           83 WSRLRRKFS   91 (92)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHhc
Confidence            366777774

>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A

Probab=99.20  E-value=3e-11  Score=94.87  Aligned_cols=69  Identities=20%  Similarity=0.287  Sum_probs=57.5

Q ss_pred             HHHHHHhHhhc-cCCC-cceeHHHHHHHHHh-CCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          436 DALRLCFQMYD-IDRS-GCITKEEVASMLRA-LPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       436 ~~l~~~f~~~D-~d~~-G~I~~~e~~~~l~~-~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      ++++.+|+.|| +|++ |+|+.+||+.++.. ++.. .. ...++++++.+++.+|.|+||.|+|+||..+|..
T Consensus        10 ~~l~~aF~~fd~~dg~~G~Is~~EL~~~l~~~l~~~-lg-~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~~~~   81 (101)
T 3nso_A           10 AAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATW-TP-TEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLAC   81 (101)
T ss_dssp             HHHHHHHHHHHTTSSCTTEECHHHHHHHHHHHTTTC-CC-CTTCHHHHHHHHHHHHHCCCSCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhh-cC-CCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence            57899999998 8887 99999999999985 4321 00 1256789999999999999999999999998865

>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A

Probab=99.20  E-value=1.3e-11  Score=112.54  Aligned_cols=106  Identities=15%  Similarity=0.226  Sum_probs=84.5

Q ss_pred             HHHHHHHcC-----CC-C--cceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcc-eeHHHHHHHHHhCCCCCCCCC
Q 009980          403 PRIFDLFDN-----NR-D--GTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGC-ITKEEVASMLRALPDDCLPVD  473 (521)
Q Consensus       403 ~~~f~~~D~-----~~-~--g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~-I~~~e~~~~l~~~~~~~~~~~  473 (521)
                      .++|..+|.     |+ +  |.|+.+||.. +..++..+..   ..+|+.+|.|++|. |+++||..++......     
T Consensus        54 ~~~F~~~D~~~~~~d~~~~dG~I~~~E~~~-l~~lg~~~~~---~~lf~~~D~d~dG~~I~f~EF~~~~~~~~~~-----  124 (214)
T 2l4h_A           54 HRRFCELLPQEQRSVESSLRAQVPFEQILS-LPELKANPFK---ERICRVFSTSPAKDSLSFEDFLDLLSVFSDT-----  124 (214)
T ss_dssp             HHHHHHHSCGGGCCHHHHTTSEECHHHHTT-CHHHHTSTTH---HHHHHHHCCSSSCCSEEHHHHHHHHHHTSSC-----
T ss_pred             HHHHHHhCcccccccccccCCcCCHHHHHH-hhccCCChHH---HHHHHHhCcCCCCCEecHHHHHHHHHHHcCC-----
Confidence            346777787     55 6  9999999998 7777766554   45789999999999 9999999999875432     


Q ss_pred             CCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc-Cc-----cHHHHHHHh
Q 009980          474 ITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR-DS-----SLQDVVLSS  517 (521)
Q Consensus       474 ~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~-~~-----~~~~~~~~~  517 (521)
                      ...++.+..+|+.+|.|+||+|+.+||..++.. +.     .+++++++.
T Consensus       125 ~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~s~~e~~~  174 (214)
T 2l4h_A          125 ATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQ  174 (214)
T ss_dssp             SCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHSSSCTTCSCTHHHH
T ss_pred             CCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhccccCCCCCHHHHHH
Confidence            123458999999999999999999999999976 33     566666664

>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}

Probab=99.19  E-value=7.9e-11  Score=126.33  Aligned_cols=134  Identities=10%  Similarity=0.103  Sum_probs=111.8

Q ss_pred             HHHHHHHHh--hhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCC-------CCcceeHHHHHHHHhhccCCCc
Q 009980          365 QNLRIHFRT--ICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNN-------RDGTVDMREILCGFSSLRKSQG  434 (521)
Q Consensus       365 ~~l~~~F~~--~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~-------~~g~I~~~ef~~~~~~~~~~~~  434 (521)
                      ..++++|..  +|.|++| |+.+|+...|+.     ...++..+|+.+|.+       ++|.|+|+||...+..+..   
T Consensus       150 ~~L~kaf~~~~~D~n~dGkIs~kel~~~l~~-----~~~~v~~l~~~~d~~~~~~d~~~~g~i~feEF~~f~~~l~~---  221 (885)
T 3ohm_B          150 TFLRKAYTKLKLQVNQDGRIPVKNILKMFSA-----DKKRVETALESCGLKFNRSESIRPDEFSLEIFERFLNKLCL---  221 (885)
T ss_dssp             HHHHHHHHHHHHSCCTTSCEEHHHHHHTTGG-----GHHHHHHHHHTTTCCCSTTCEECGGGCCHHHHHHHHHHHSC---
T ss_pred             HHHHHHHHHhcCccCCCCccCHHHHHHHHhc-----CHHHHHHHHHHhCCCccccccCCCCcCCHHHHHHHHHhcCC---
Confidence            457788887  8999999 999999888775     246788899999987       8899999999999887543   


Q ss_pred             HHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCC----CCChhHHHHHHHHhcCC----CCcceeHHHHHHHHhc
Q 009980          435 DDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVD----ITEPGKLDEIFDLMDAN----NDGKVTFDEFRAAMQR  506 (521)
Q Consensus       435 ~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~----~~~~~~~~~~f~~~D~~----~dG~I~~~Ef~~~~~~  506 (521)
                      .++++.+|+.||.+++|+||.+||..+|...+......+    ..+++++..+++.+|.+    ++|.|++++|..+|..
T Consensus       222 R~EI~eiF~~ydsd~~g~mT~~EL~~FL~~~Q~e~~~~e~~~~~~t~e~~~~iI~k~e~~~~~~~~g~LsldgF~~yL~S  301 (885)
T 3ohm_B          222 RPDIDKILLEIGAKGKPYLTLEQLMDFINQKQRDPRLNEVLYPPLRPSQARLLIEKYEPNQQFLERDQMSMEGFSRYLGG  301 (885)
T ss_dssp             CHHHHHHHHHTTCCSTTCEEHHHHHHHHHHHSSCTTSCTTTSCCCCHHHHHHHHHHHCCCHHHHHTTEECHHHHHHHHTS
T ss_pred             HHHHHHHHHHHhcCCCCccCHHHHHHHHHHhcCcccccccccccCCHHHHHHHHHHhcCChhhhccCccchhhhhhhccC
Confidence            467999999999999999999999999998653211111    14678899999999998    7899999999999987

>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A

Probab=99.19  E-value=6.7e-11  Score=90.71  Aligned_cols=82  Identities=21%  Similarity=0.241  Sum_probs=69.6

Q ss_pred             CCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHH
Q 009980          358 DLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDD  436 (521)
Q Consensus       358 ~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~  436 (521)
                      .+++++..+++.+|..+|.|++| |+.+||..+++.+| ..+..++..+|+.+|.|++|.|+|+||+.++.....  ..+
T Consensus         4 ~~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~~--~~~   80 (86)
T 2opo_A            4 EDTPQDIADRERIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARANRG--LVK   80 (86)
T ss_dssp             --CHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTT-TCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHCTT--THH
T ss_pred             cCCHhhHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHcC-CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHCcc--HHH
Confidence            46888999999999999999999 99999999999999 888889999999999999999999999998876432  234


Q ss_pred             HHHHHh
Q 009980          437 ALRLCF  442 (521)
Q Consensus       437 ~l~~~f  442 (521)
                      .+..+|
T Consensus        81 ~~~~aF   86 (86)
T 2opo_A           81 DVSKIF   86 (86)
T ss_dssp             HHHHHC
T ss_pred             HHHHhC
Confidence            455544

>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A

Probab=99.18  E-value=1.2e-10  Score=89.36  Aligned_cols=72  Identities=22%  Similarity=0.421  Sum_probs=64.1

Q ss_pred             HHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhcCccHHHH
Q 009980          435 DDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDSSLQDV  513 (521)
Q Consensus       435 ~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~~~~~~~~  513 (521)
                      .++++.+|+.+|.|++|+|+.+||..++..++ .      .+++++..+|+.+|.|+||.|+|+||..++...+.+.++
T Consensus        10 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g-~------~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~~~~~~   81 (86)
T 2opo_A           10 IADRERIFKRFDTNGDGKISSSELGDALKTLG-S------VTPDEVRRMMAEIDTDGDGFISFDEFTDFARANRGLVKD   81 (86)
T ss_dssp             HHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTT-T------CCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHCTTTHHH
T ss_pred             HHHHHHHHHHHCCCCCCCcCHHHHHHHHHHcC-C------CCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHCccHHHH
Confidence            46789999999999999999999999999877 4      567799999999999999999999999999987665433

>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}

Probab=99.18  E-value=5.9e-11  Score=92.68  Aligned_cols=71  Identities=24%  Similarity=0.503  Sum_probs=62.5

Q ss_pred             cCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          430 RKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       430 ~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      ......++++.+|+.||.|++|+|+.+||..++..++..      .++++++.+|+.+|.|+||.|+|+||..++..
T Consensus        23 ~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~------~~~~e~~~l~~~~D~d~dG~I~~~EF~~~~~~   93 (94)
T 2kz2_A           23 KDTDSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEK------LTDEEVDEMIREADIDGDGQVNYEEFVQMMTA   93 (94)
T ss_dssp             CCCSCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHHTCC------CCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred             cCCCHHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCCC------CCHHHHHHHHHHhCCCCCCcEeHHHHHHHHhc
Confidence            344567889999999999999999999999999987654      56789999999999999999999999998763

>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5

Probab=99.18  E-value=5.4e-11  Score=86.36  Aligned_cols=64  Identities=17%  Similarity=0.428  Sum_probs=58.2

Q ss_pred             HHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          437 ALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       437 ~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      +++.+|+.+|.|++|+|+.+||..++..++..      .+++++..+|+.+|.|+||.|+|+||..++..
T Consensus         2 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~------~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~   65 (67)
T 1tiz_A            2 SAKRVFEKFDKNKDGKLSLDEFREVALAFSPY------FTQEDIVKFFEEIDVDGNGELNADEFTSCIEK   65 (67)
T ss_dssp             THHHHHHHHCTTSSSCEEHHHHHHHHHHTCTT------SCHHHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred             HHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCC------CCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence            47889999999999999999999999988754      56779999999999999999999999998864

>2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei}

Probab=99.17  E-value=6.6e-12  Score=115.62  Aligned_cols=100  Identities=22%  Similarity=0.245  Sum_probs=77.6

Q ss_pred             hHHHHHHHHcCCCCcceeHHHHHH-HHhhccCCCcHHHHHHHhHhh---------ccCCCcceeHHHHHHHHHhCCCCCC
Q 009980          401 LAPRIFDLFDNNRDGTVDMREILC-GFSSLRKSQGDDALRLCFQMY---------DIDRSGCITKEEVASMLRALPDDCL  470 (521)
Q Consensus       401 ~~~~~f~~~D~~~~g~I~~~ef~~-~~~~~~~~~~~~~l~~~f~~~---------D~d~~G~I~~~e~~~~l~~~~~~~~  470 (521)
                      .+.++|..+|.|++|.|+++||.. ++..++...+..++..+|+.+         |.|++|.|+++||..++......  
T Consensus        52 ~l~~~F~~~D~d~dG~Is~~El~~~l~~~lg~~~~~~~~~~~~~~~f~~~~~~~~D~d~~G~I~~~EF~~~~~~~~~~--  129 (226)
T 2lvv_A           52 RRIELFKQFDTNGTGKLGFREVLDGCYGILKLDEFTTHLPDIVQRAFDKAKDLGNKVKGVGEEDLVEFLEFRLMLCYI--  129 (226)
T ss_dssp             HHHHHHHHHGGGSCSCBCSHHHHHHHHHTTCCTTTSSSCHHHHHHHHHHHHHHHHHHSCCCCCSCBCHHHHHHHHHHH--
T ss_pred             HHHHHHHHHCCCCCCcCcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhcccCCCCCCCCcCCHHHHHHHHHHHHhc--
Confidence            567899999999999999999998 445555555544455555544         99999999999999853321110  


Q ss_pred             CCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          471 PVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       471 ~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                          ..++.+..+|+.+|+|++|+|+.+||..++..
T Consensus       130 ----~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~  161 (226)
T 2lvv_A          130 ----YDIFELTVMFDTMDKDGSLLLELQEFKEALPK  161 (226)
T ss_dssp             ----HHHHHHHHHHHHHSCSSCCEECHHHHHHHHHH
T ss_pred             ----cCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHH
Confidence                12357899999999999999999999999874

>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10

Probab=99.17  E-value=5.2e-11  Score=89.45  Aligned_cols=70  Identities=24%  Similarity=0.473  Sum_probs=62.6

Q ss_pred             HHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhcCccHHH
Q 009980          436 DALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDSSLQD  512 (521)
Q Consensus       436 ~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~~~~~~~  512 (521)
                      ++++.+|+.+|.|++|+|+.+||..++..++ .      .+++++..+|+.+|.|+||.|+|+||..++...+.+.+
T Consensus         3 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~g-~------~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~~~~~~~   72 (78)
T 1k9u_A            3 DDMERIFKRFDTNGDGKISLSELTDALRTLG-S------TSADEVQRMMAEIDTDGDGFIDFNEFISFCNANPGLMK   72 (78)
T ss_dssp             CHHHHHHHHHCTTCSSEECHHHHHHHHHHHH-T------CCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHCHHHHH
T ss_pred             HHHHHHHHHHCCCCCCcCcHHHHHHHHHHhC-C------CCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHCchhHH
Confidence            4688999999999999999999999998876 4      56779999999999999999999999999998766543

>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}

Probab=99.14  E-value=3.1e-10  Score=88.16  Aligned_cols=81  Identities=20%  Similarity=0.379  Sum_probs=67.8

Q ss_pred             cHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc--Cc--c
Q 009980          434 GDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR--DS--S  509 (521)
Q Consensus       434 ~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~--~~--~  509 (521)
                      ..+.++.+|+.||.|++|+|+.+||..++..++..      .+++++..+|..+|.|+||.|+|+||..++..  ..  .
T Consensus         7 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~------~~~~~~~~l~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~   80 (92)
T 2kn2_A            7 AEEELKEAFKVFDKDQNGYISASELRHVMINLGEK------LTDEEVEQMIKEADLDGDGQVNYEEFVKMMMTVRGGGGG   80 (92)
T ss_dssp             HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCC------CCHHHHHHHHHHHCSSCCSSEEHHHHHHHHHHHTTTCCC
T ss_pred             HHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHhCCC------CCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhccCCCCC
Confidence            34678999999999999999999999999988754      57789999999999999999999999998876  22  2


Q ss_pred             HHHHHHHhhhh
Q 009980          510 LQDVVLSSLRQ  520 (521)
Q Consensus       510 ~~~~~~~~~~~  520 (521)
                      ...+++...++
T Consensus        81 ~~~~~l~~aF~   91 (92)
T 2kn2_A           81 NGWSRLRRKFS   91 (92)
T ss_dssp             HHHHHHHHHHT
T ss_pred             chHHHHHHHhc
Confidence            45566666554

>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens}

Probab=99.13  E-value=7.4e-11  Score=86.75  Aligned_cols=68  Identities=26%  Similarity=0.528  Sum_probs=59.3

Q ss_pred             CcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          433 QGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       433 ~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      .+.++++.+|+.+|.|++|+|+.+||..++..++..      .+++++..+|+.+|.|+||.|+|+||..++..
T Consensus         3 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~------~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~   70 (71)
T 2b1u_A            3 AGLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQP------LPQEELDAMIREADVDQDGRVNYEEFARMLAQ   70 (71)
T ss_dssp             TTHHHHHHHHTTSCCSSSSEEEHHHHHHHGGGTTCS------SCHHHHHHHHHHCCSSSSSEEETTHHHHHHTC
T ss_pred             ccHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCC------CCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhh
Confidence            346779999999999999999999999999887654      56778999999999999999999999998753

>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}

Probab=99.13  E-value=1e-10  Score=87.59  Aligned_cols=70  Identities=17%  Similarity=0.321  Sum_probs=59.0

Q ss_pred             CCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhh
Q 009980          359 LNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSS  428 (521)
Q Consensus       359 ~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~  428 (521)
                      ++++++.+++.+|..+|.|++| |+.+||..+++.+|...+..++..+|+.+|.|++|.|+|+||+.++..
T Consensus         1 ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~   71 (77)
T 2joj_A            1 LSEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDFLDIMTE   71 (77)
T ss_dssp             CCHHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHHHHTCCCHHHHHHHHHHHHCCSSSSEEEHHHHHHHHTH
T ss_pred             CCHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence            3567788888888888888888 888888888888888777788888888888888888888888887754

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=99.12  E-value=2.2e-10  Score=113.25  Aligned_cols=142  Identities=20%  Similarity=0.325  Sum_probs=104.3

Q ss_pred             ecccccccCceEEEEeEEccCCCcceEEEEEee--cCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHH
Q 009980           14 VTDILGRGGFSVVRRGIKKTCGETNQVAIKTLR--RIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVM   91 (521)
Q Consensus        14 ~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l   91 (521)
                      -.+.|+.|.++.||++...    +..+++|+.+  .....                           .....+.+|..++
T Consensus        42 ~~~~l~~G~sn~~y~v~~~----~~~~vlr~~~~p~~~~~---------------------------~~~~~~~~E~~~l   90 (359)
T 3dxp_A           42 SVEQFKGGQSNPTFKLVTP----GQTYVMRAKPGPKSKLL---------------------------PSAHAIEREYRVM   90 (359)
T ss_dssp             EEEECCC-CCSCEEEEECS----SCEEEEECCCC-------------------------------------CHHHHHHHH
T ss_pred             eEEEcCCcccceEEEEEEC----CceEEEEeCCCCCCCCC---------------------------CcHHHHHHHHHHH
Confidence            3567899999999998763    3578888864  21100                           1123478899999


Q ss_pred             HHHhhccCCCCCccceeEEEEeC---CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH--------
Q 009980           92 RKIVENVSPHPNVIDLYDVYEDQ---NGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ--------  160 (521)
Q Consensus        92 ~~l~~~~~~hpniv~~~~~~~~~---~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~--------  160 (521)
                      +.+..   .+..+++++.++.+.   +..|+||||++|..+.+.  ....+++.+...++.++..+|..||+        
T Consensus        91 ~~L~~---~~vpvP~~~~~~~~~~~~g~~~~vme~v~G~~l~~~--~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~  165 (359)
T 3dxp_A           91 DALAG---TDVPVAKMYALCEDESVIGRAFYIMEFVSGRVLWDQ--SLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGL  165 (359)
T ss_dssp             HHHTT---SSSCCCCEEEEECCTTTTSSCEEEEECCCCBCCCCT--TCTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTC
T ss_pred             HHhhc---CCCCCCcEEEECCCCCccCCeEEEEEecCCeecCCC--ccccCCHHHHHHHHHHHHHHHHHHhCCCchhccc
Confidence            99832   245688899888776   458999999999887542  12347788889999999999999997        


Q ss_pred             --------------------------------------------------CCCeeccCCCCcEEEeeCCCCC--CEEEee
Q 009980          161 --------------------------------------------------ANIVHRDLKPENCLFLNDREDS--PLKIMD  188 (521)
Q Consensus       161 --------------------------------------------------~~i~H~dlkp~Nil~~~~~~~~--~~kl~D  188 (521)
                                                                        .+++|+|++|.||++   +.++  .+.|+|
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~---~~~~~~v~~viD  242 (359)
T 3dxp_A          166 GDYGKPGNYFQRQIERWTKQYKLSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMF---HPTEPRVLAVLD  242 (359)
T ss_dssp             TTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEE---CSSSSCEEEECC
T ss_pred             cccCCCCCchHHHHHHHHHHHHhcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEE---eCCCCcEEEEEC
Confidence                                                              368999999999999   4333  368999


Q ss_pred             cCCCcc
Q 009980          189 FGLSSV  194 (521)
Q Consensus       189 fg~a~~  194 (521)
                      |+.+..
T Consensus       243 we~a~~  248 (359)
T 3dxp_A          243 WELSTL  248 (359)
T ss_dssp             CTTCEE
T ss_pred             cccccc
Confidence            998864

>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A

Probab=99.12  E-value=6.1e-11  Score=101.51  Aligned_cols=111  Identities=10%  Similarity=0.112  Sum_probs=81.2

Q ss_pred             HHHHHHHHhhhcCCCCCCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHh
Q 009980          365 QNLRIHFRTICANGDNATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQM  444 (521)
Q Consensus       365 ~~l~~~F~~~D~~~~gi~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~  444 (521)
                      .++..++..+|.+++-.....+.         .....+..+|+.+|.|++|.|+.+||..++..++...+++++..+|+.
T Consensus        24 ~~~~~i~~~~d~~~~~~~~~~l~---------~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~~   94 (150)
T 2jjz_A           24 RRLAEINREFLCDQKYSDEENLP---------EKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISE   94 (150)
T ss_dssp             HHHHHHHHHHHTCGGGSSCTTHH---------HHHHHHHHHHTTSCCCTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHhccCCCchhhHhHH---------HHHHHHHHHHHHhCCCCcCcCCHHHHHHHHHHcCCCCCHHHHHHHHHH
Confidence            45666677788776411111121         113467889999999999999999999999998888889999999999


Q ss_pred             hccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcce
Q 009980          445 YDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKV  495 (521)
Q Consensus       445 ~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I  495 (521)
                      +|.|++|.|+++||..++...           ...+..+|+.+|.|++|+-
T Consensus        95 ~D~d~dg~I~~~eF~~~~~~~-----------~~~i~~aF~~~D~d~~G~~  134 (150)
T 2jjz_A           95 VTGGVSDTISYRDFVNMMLGK-----------RSAVLKLVMMFEGKANESS  134 (150)
T ss_dssp             HHTTSCSSBCHHHHHHHHHSS-----------SCCHHHHHHC---------
T ss_pred             HCCCCCCcEeHHHHHHHHHHh-----------HHHHHHHHHHHcCCCCCCC
Confidence            999999999999999999753           1268999999999999973

>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A

Probab=99.12  E-value=1.4e-10  Score=93.06  Aligned_cols=66  Identities=21%  Similarity=0.390  Sum_probs=57.3

Q ss_pred             HHHHHHHhHhhc-cCCCc-ceeHHHHHHHHHh-----CCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          435 DDALRLCFQMYD-IDRSG-CITKEEVASMLRA-----LPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       435 ~~~l~~~f~~~D-~d~~G-~I~~~e~~~~l~~-----~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      .++++.+|+.|| +|++| +|+.+||..++..     ++..      .++++++.+++.+|.|+||.|+|+||..+|..
T Consensus        21 ~~~l~~aF~~fD~~dgdGG~Is~~EL~~~l~~~l~~~lg~~------~t~~ev~~li~~~D~dgdG~Idf~EF~~~m~~   93 (113)
T 2lnk_A           21 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKR------TDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSC   93 (113)
T ss_dssp             HHHHHHHHHHTTTTTSCTTCBCHHHHHHHHHHHCGGGGTTC------CCTTHHHHHHHHHCSSSSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcchhcCCC------CCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence            457999999999 89997 9999999999975     3332      45668999999999999999999999998875

>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens}

Probab=99.10  E-value=2e-10  Score=90.89  Aligned_cols=69  Identities=23%  Similarity=0.406  Sum_probs=57.1

Q ss_pred             HHHHHHhHhhc-cCCC-cceeHHHHHHHHHh-CCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          436 DALRLCFQMYD-IDRS-GCITKEEVASMLRA-LPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       436 ~~l~~~f~~~D-~d~~-G~I~~~e~~~~l~~-~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      ++++.+|+.|| .|++ |+|+.+||+.++.. ++.. .. ...++++++.+|+.+|.|+||.|+|+||..+|..
T Consensus        13 ~~l~~aF~~fD~~dgd~G~Is~~EL~~~l~~~lg~~-l~-~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~m~~   84 (104)
T 3zwh_A           13 DVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSW-LG-KRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSS   84 (104)
T ss_dssp             HHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGG-SC-SSCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHhccCCCCCeECHHHHHHHHHHHcchh-cc-CCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHH
Confidence            57899999998 7775 89999999999985 5421 00 0146779999999999999999999999999876

>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A

Probab=99.10  E-value=1.6e-10  Score=90.66  Aligned_cols=68  Identities=19%  Similarity=0.297  Sum_probs=58.6

Q ss_pred             HHHHHHHHHHHHhhh-cCCC-C-CCHHHHHHHHHh-c----CCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhh
Q 009980          361 EEEIQNLRIHFRTIC-ANGD-N-ATLSEFEEVLKA-M----NMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSS  428 (521)
Q Consensus       361 ~~~~~~l~~~F~~~D-~~~~-g-i~~~el~~~l~~-~----~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~  428 (521)
                      +..+.++.++|+.|| .||+ | |+.+||+.+|+. +    |...+.+++.++++.+|.|+||.|+|+||+.++..
T Consensus         6 e~~i~~l~~aF~~fd~~dg~~G~Is~~EL~~~l~~~l~~~lg~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~~~~   81 (101)
T 3nso_A            6 EQAVAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLAC   81 (101)
T ss_dssp             HHHHHHHHHHHHHHHTTSSCTTEECHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHCCCSCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence            345678999999998 8887 8 999999999986 3    56667789999999999999999999999988765

>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A

Probab=99.10  E-value=1.3e-11  Score=99.24  Aligned_cols=99  Identities=17%  Similarity=0.235  Sum_probs=82.1

Q ss_pred             CCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhc---cCCC
Q 009980          358 DLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSL---RKSQ  433 (521)
Q Consensus       358 ~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~---~~~~  433 (521)
                      .++++++   ..+|..+|  ++| |+.+||..++...  ......+..+|+.+|.|++|.|+.+||..++..+   +...
T Consensus         5 ~~~~~e~---~~l~~~~d--~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~   77 (108)
T 2kyc_A            5 ILSPSDI---AAALRDCQ--APDSFSPKKFFQISGMS--KKSSSQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVL   77 (108)
T ss_dssp             SSCHHHH---HHHHTTSC--STTTCCHHHHHHHHTCT--TCCSSSHHHHCSSSCSCCSSCCCGGGTTTSHHHHSSSCCCC
T ss_pred             cCCHHHH---HHHHHHcC--CCCcCCHHHHHHHHhhC--cccHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhhccCCC
Confidence            3566655   45577777  677 9999999887432  2345689999999999999999999999999887   5667


Q ss_pred             cHHHHHHHhHhhccCCCcceeHHHHHHHHH
Q 009980          434 GDDALRLCFQMYDIDRSGCITKEEVASMLR  463 (521)
Q Consensus       434 ~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~  463 (521)
                      +++++..+|+.+|.|++|.|+++||..++.
T Consensus        78 ~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~  107 (108)
T 2kyc_A           78 TASETKTFLAAADHDGDGKIGAEEFQEMVQ  107 (108)
T ss_dssp             CTTTTHHHHTTTCCSSSSCCCSSHHHHHHH
T ss_pred             CHHHHHHHHHHhCCCCCCcCCHHHHHHHHh
Confidence            788899999999999999999999998875

>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}

Probab=99.10  E-value=1.8e-10  Score=86.16  Aligned_cols=66  Identities=24%  Similarity=0.500  Sum_probs=59.5

Q ss_pred             HHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          435 DDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       435 ~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      .+.++.+|+.+|.|++|+|+.+||..++..++..      .+++++..+|+.+|.|++|.|+|+||..++..
T Consensus         6 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~------~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~   71 (77)
T 2joj_A            6 KQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFD------VKKPEILELMNEYDREGNGYIGFDDFLDIMTE   71 (77)
T ss_dssp             HHHHHHHHHHHCCSSSSEEEHHHHHHHHHHHTCC------CHHHHHHHHHHHHCCSSSSEEEHHHHHHHHTH
T ss_pred             HHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhCCC------CCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence            4578899999999999999999999999987654      56778999999999999999999999998864

>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*

Probab=99.10  E-value=1.9e-10  Score=89.19  Aligned_cols=69  Identities=22%  Similarity=0.373  Sum_probs=56.6

Q ss_pred             HHHHHHhHhhc-cCCC-cceeHHHHHHHHHh-CCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          436 DALRLCFQMYD-IDRS-GCITKEEVASMLRA-LPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       436 ~~l~~~f~~~D-~d~~-G~I~~~e~~~~l~~-~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      ++++.+|+.|| +||+ |+|+.+||+.++.. ++... . ...++++++.+++.+|.|+||.|+|+||..+|..
T Consensus        10 ~~l~~~F~~fd~~dg~~G~Is~~EL~~~l~~~lg~~l-~-~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~~~~   81 (93)
T 4eto_A           10 DVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFL-G-KRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSC   81 (93)
T ss_dssp             HHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGC-----CCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHcccCCCCCeECHHHHHHHHHHHhhhhc-c-CCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHH
Confidence            57899999998 6885 89999999999985 54210 0 0146779999999999999999999999999876

>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A

Probab=99.10  E-value=2.7e-10  Score=88.10  Aligned_cols=70  Identities=23%  Similarity=0.369  Sum_probs=65.3

Q ss_pred             CCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhh
Q 009980          359 LNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSS  428 (521)
Q Consensus       359 ~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~  428 (521)
                      ++++++.+++.+|..+|.|++| |+.+||..+++.+|...+..++..+|..+|.|++|.|+|+||+.++..
T Consensus        14 l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~D~~~dg~i~~~eF~~~~~~   84 (90)
T 1avs_A           14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR   84 (90)
T ss_dssp             BCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            6788899999999999999999 999999999999999888889999999999999999999999988765

>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A

Probab=99.07  E-value=4.1e-10  Score=87.12  Aligned_cols=66  Identities=29%  Similarity=0.578  Sum_probs=60.0

Q ss_pred             HHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          435 DDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       435 ~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      ...++.+|+.||.|++|+|+.+||..++..++..      .+++++..+|..+|.|+||.|+|+||..++..
T Consensus        19 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~------~~~~~~~~l~~~~D~~~dg~i~~~eF~~~~~~   84 (90)
T 1avs_A           19 IAEFKAAFDMFDADGGGDISTKELGTVMRMLGQN------PTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR   84 (90)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCC------CCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCC------CCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            4578899999999999999999999999988754      56789999999999999999999999998875

>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A

Probab=99.07  E-value=1.5e-10  Score=87.53  Aligned_cols=67  Identities=18%  Similarity=0.455  Sum_probs=57.5

Q ss_pred             CcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCC-CCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          433 QGDDALRLCFQMYDIDRSGCITKEEVASMLRALP-DDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       433 ~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~-~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      ...+.++ +|+.||.|++|+|+.+||..++..++ ..      .+++++..+|+.+|.|++|.|+|+||..++..
T Consensus         6 ~~~~~l~-~F~~~D~d~~G~i~~~el~~~l~~~g~~~------~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~   73 (81)
T 1c7v_A            6 DEEEILR-AFKVFDANGDGVIDFDEFKFIMQKVGEEP------LTDAEVEEAMKEADEDGNGVIDIPEFMDLIKK   73 (81)
T ss_dssp             -CHHHHH-HHHHHSCSGGGEECHHHHHHHSSTTTTCC------CCHHHHHHHHHHHCSSGGGSEEHHHHHHHHHC
T ss_pred             cHHHHHH-HHHHHCCCCCCcCCHHHHHHHHHHhCCCC------CCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence            4567788 99999999999999999999988776 43      56778999999999999999999999998876

>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6

Probab=99.07  E-value=2.9e-10  Score=88.24  Aligned_cols=64  Identities=25%  Similarity=0.316  Sum_probs=57.3

Q ss_pred             HHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          435 DDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       435 ~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      .++++.+|+.||+|++|+|+.+|+..++..++        .+++++..+++.+|.|+||.|+|+||..+|..
T Consensus         8 ~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g--------~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~~   71 (92)
T 1fi6_A            8 RQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSK--------LPILELSHIWELSDFDKDGALTLDEFCAAFHL   71 (92)
T ss_dssp             HHHHHHHHTTTCCSTTCEEEHHHHHHHHHHHS--------SCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcC--------CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
Confidence            35688999999999999999999999998764        35678999999999999999999999998864

>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6

Probab=99.06  E-value=2.5e-10  Score=88.65  Aligned_cols=68  Identities=21%  Similarity=0.287  Sum_probs=60.5

Q ss_pred             CCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhh
Q 009980          359 LNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSS  428 (521)
Q Consensus       359 ~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~  428 (521)
                      ++++++.+++++|+.+|.|++| |+.+|+..+++.+|  .+.+++.++++.+|.|+||.|+|+||+.++..
T Consensus         3 ls~~~~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g--~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~~   71 (92)
T 1fi6_A            3 ITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSK--LPILELSHIWELSDFDKDGALTLDEFCAAFHL   71 (92)
T ss_dssp             CCHHHHHHHHHHHTTTCCSTTCEEEHHHHHHHHHHHS--SCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcC--CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
Confidence            5778889999999999999999 99999999999887  34678999999999999999999999988754

>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6

Probab=99.06  E-value=2.7e-10  Score=88.97  Aligned_cols=64  Identities=23%  Similarity=0.294  Sum_probs=57.4

Q ss_pred             HHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          435 DDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       435 ~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      .++++.+|+.||+|++|+|+.+|+..++..++        .+++++..+++.+|.|+||.|+|+||..+|..
T Consensus         9 ~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g--------~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~~   72 (95)
T 1c07_A            9 KAKYDEIFLKTDKDMDGFVSGLEVREIFLKTG--------LPSTLLAHIWSLCDTKDCGKLSKDQFALAFHL   72 (95)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHHHHHHHHHTTT--------CCHHHHHHHHHHHCTTCSSSEETTTHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCcEeHHHHHHHHHHcC--------CCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHH
Confidence            46789999999999999999999999998764        35678999999999999999999999998853

>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio}

Probab=99.05  E-value=4.7e-10  Score=88.18  Aligned_cols=66  Identities=29%  Similarity=0.477  Sum_probs=57.3

Q ss_pred             HHHHHHHhHhhc-cCCCc-ceeHHHHHHHHHh-----CCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          435 DDALRLCFQMYD-IDRSG-CITKEEVASMLRA-----LPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       435 ~~~l~~~f~~~D-~d~~G-~I~~~e~~~~l~~-----~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      .++++.+|+.|| +|++| +|+.+||..++..     ++..      .++++++.+|+.+|.|+||.|+|+||..+|..
T Consensus         9 ~~~l~~~F~~fDd~dg~gG~I~~~El~~~l~~~~~~~lg~~------~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~   81 (99)
T 2y5i_A            9 MDALITVFHNYSGSEGDKYKLSKGELKELLNAELTDFLMSQ------KDPMLVEKIMNDLDSNKDNEVDFNEFVVLVAA   81 (99)
T ss_dssp             HHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSGGGGTTS------CCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHhhhhcccc------ccHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence            357899999998 89998 9999999999985     3322      56778999999999999999999999998875

>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A

Probab=99.05  E-value=2.5e-10  Score=89.74  Aligned_cols=70  Identities=24%  Similarity=0.329  Sum_probs=56.9

Q ss_pred             HHHHHHhHhhccCC---CcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          436 DALRLCFQMYDIDR---SGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       436 ~~l~~~f~~~D~d~---~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      ++++.+|+.||.++   +|+|+.+||+.++...+...... ..++++++.+++.+|.|+||.|+|+||..+|..
T Consensus        11 ~~l~~~F~~fD~~~g~~~G~Is~~EL~~~l~~~~~~~l~~-~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~m~~   83 (100)
T 3nxa_A           11 IVLVENFYKYVSKYSLVKNKISKSSFREMLQKELNHMLSD-TGNRKAADKLIQNLDANHDGRISFDEYWTLIGG   83 (100)
T ss_dssp             HHHHHHHHHTSCTTCSCTTCBCHHHHHHHHHHHSTTTTCS-SHHHHHHHHHHHHSCCCSSCCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCcCCCCCCeEcHHHHHHHHHHHccccccc-cccHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence            57899999999964   79999999999998744321111 123568999999999999999999999999876

>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7

Probab=99.05  E-value=2.5e-10  Score=91.16  Aligned_cols=84  Identities=17%  Similarity=0.314  Sum_probs=66.9

Q ss_pred             ceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcce
Q 009980          416 TVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKV  495 (521)
Q Consensus       416 ~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I  495 (521)
                      .++++++...+..... ...+.++.+|+.||.|++|+|+.+||..++..++..      .+++++..+|..+|.|++|.|
T Consensus         5 ~~~~~~~~~~l~~~~~-~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~------~~~~e~~~l~~~~d~~~~g~i   77 (105)
T 1wlz_A            5 ATADRDILARLHKAVT-SHYHAITQEFENFDTMKTNTISREEFRAICNRRVQI------LTDEQFDRLWNEMPVNAKGRL   77 (105)
T ss_dssp             TTCCHHHHHHHHHHHH-HTHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHTCC------CCHHHHHHHHTTSCBCTTSCB
T ss_pred             chhHHHHHHHHHHHHH-chHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCC------CCHHHHHHHHHHcCCCCCCCC
Confidence            3556677666655322 235678899999999999999999999999887654      567789999999999999999


Q ss_pred             eHHHHHHHHhc
Q 009980          496 TFDEFRAAMQR  506 (521)
Q Consensus       496 ~~~Ef~~~~~~  506 (521)
                      +|+||..++..
T Consensus        78 ~~~eF~~~~~~   88 (105)
T 1wlz_A           78 KYPDFLSRFSS   88 (105)
T ss_dssp             CHHHHHHHHC-
T ss_pred             cHHHHHHHHhc
Confidence            99999998876

>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}

Probab=99.05  E-value=5e-11  Score=86.28  Aligned_cols=63  Identities=22%  Similarity=0.362  Sum_probs=54.5

Q ss_pred             HHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          438 LRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       438 l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      ++.+|+.+|.|++|+|+.+||..++..++..      .+++++..+|+.+|.|+||.|+++||..++..
T Consensus         2 l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~------~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~   64 (66)
T 3li6_A            2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAI------KNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS   64 (66)
T ss_dssp             CCHHHHHHCTTCSSSCCHHHHHHHHHHHHHH------HHHHHHHHHHHHHCTTCSSSCCHHHHHHHHTC
T ss_pred             HHHHHHHHCCCCCCcccHHHHHHHHHHccCC------CcHHHHHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence            3568999999999999999999998876533      45668999999999999999999999999875

>2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A

Probab=99.05  E-value=2.6e-10  Score=90.55  Aligned_cols=66  Identities=20%  Similarity=0.415  Sum_probs=56.0

Q ss_pred             HHHHHHhHhhc-cCCC-cceeHHHHHHHHHh-CCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          436 DALRLCFQMYD-IDRS-GCITKEEVASMLRA-LPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       436 ~~l~~~f~~~D-~d~~-G~I~~~e~~~~l~~-~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      ++++.+|+.|| .|++ |+|+.+||..++.. ++...     .++++++.+|+.+|.|+||.|+|+||..+|..
T Consensus        22 ~~l~~aF~~fD~~dg~~G~Is~~EL~~~l~~~lg~~~-----~~~~ev~~li~~~D~d~dG~Idf~EF~~~~~~   90 (106)
T 2h2k_A           22 ETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLL-----KDVGSLDEKMKSLDVNQDSELKFNEYWRLIGE   90 (106)
T ss_dssp             HHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCTTTT-----TTCCCHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcCcCC-----CCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHH
Confidence            57999999999 7986 79999999999975 55331     12357999999999999999999999999876

>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...

Probab=99.04  E-value=5.1e-10  Score=86.86  Aligned_cols=64  Identities=30%  Similarity=0.509  Sum_probs=56.4

Q ss_pred             HHHHHHhHhhccCCCc---ceeHHHHHHHHHh-----CCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          436 DALRLCFQMYDIDRSG---CITKEEVASMLRA-----LPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       436 ~~l~~~f~~~D~d~~G---~I~~~e~~~~l~~-----~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      +.++.+|+.|| +++|   +|+.+||..++..     ++..      .++++++.+|+.+|.|+||.|+|+||..+|..
T Consensus         9 ~~l~~~F~~~D-~~dG~~g~Is~~EL~~~l~~~~~~~lg~~------~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~   80 (92)
T 3rm1_A            9 VALIDVFHQYS-GREGDKHKLKKSELKELINNELSHFLEEI------KEQEVVDKVMETLDSNGDGECDFQEFMAFVAM   80 (92)
T ss_dssp             HHHHHHHHHHH-TSSSSTTSBCHHHHHHHHHHHCTTTSCCC------CSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHc-cCCCCcCeECHHHHHHHHHHHhhhhccCc------ccHHHHHHHHHHHcCCCCCCCcHHHHHHHHHH
Confidence            56889999999 7666   9999999999998     5543      56789999999999999999999999998875

>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6

Probab=99.04  E-value=2.2e-10  Score=90.07  Aligned_cols=64  Identities=19%  Similarity=0.310  Sum_probs=57.7

Q ss_pred             HHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          435 DDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       435 ~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      .++++.+|+.||+|++|+|+.+|+..++...+        .+++++..+++.+|.|+||.|+|+||..+|..
T Consensus        10 ~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~~--------l~~~~l~~i~~~~D~d~dG~i~~~EF~~~~~~   73 (99)
T 1qjt_A           10 NPVYEKYYRQVEAGNTGRVLALDAAAFLKKSG--------LPDLILGKIWDLADTDGKGVLSKQEFFVALRL   73 (99)
T ss_dssp             CTHHHHHHHHHCCTTSSCCCSHHHHHHHHTSS--------SCHHHHHHHHHHHCCSSSSSCCSHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcC--------CCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHH
Confidence            35789999999999999999999999998764        45779999999999999999999999998863

>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6

Probab=99.04  E-value=2.8e-10  Score=88.94  Aligned_cols=68  Identities=16%  Similarity=0.166  Sum_probs=59.4

Q ss_pred             CCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhh
Q 009980          359 LNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSS  428 (521)
Q Consensus       359 ~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~  428 (521)
                      ++++++.+++++|+.+|.|++| |+.+|+..+++.+|  .+..++.++++.+|.|++|.|+|+||+.++..
T Consensus         4 ls~~~~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g--~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~~   72 (95)
T 1c07_A            4 VSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTG--LPSTLLAHIWSLCDTKDCGKLSKDQFALAFHL   72 (95)
T ss_dssp             SCSHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHTTT--CCHHHHHHHHHHHCTTCSSSEETTTHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHcC--CCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHH
Confidence            5678889999999999999999 99999999999886  34678899999999999999999999888753

>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A

Probab=99.04  E-value=3e-10  Score=84.68  Aligned_cols=67  Identities=27%  Similarity=0.530  Sum_probs=59.1

Q ss_pred             cHHHHHHHhHhh-ccCCC-cceeHHHHHHHHHhCCCCCCCCCCC--ChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          434 GDDALRLCFQMY-DIDRS-GCITKEEVASMLRALPDDCLPVDIT--EPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       434 ~~~~l~~~f~~~-D~d~~-G~I~~~e~~~~l~~~~~~~~~~~~~--~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      +.++++.+|+.| |.|++ |+|+.+||..++..++..      .  +++++..+|+.+|.|++|.|+|+||..++..
T Consensus         3 ~~~~l~~~F~~~~D~d~~~G~i~~~el~~~l~~~g~~------~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~   73 (76)
T 1qx2_A            3 SPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPS------LLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKK   73 (76)
T ss_dssp             CHHHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGG------SCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHcccCCCcCeECHHHHHHHHHHhCCC------cCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence            456799999999 99999 999999999999887643      3  5568999999999999999999999998864

>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A

Probab=99.04  E-value=4.7e-10  Score=87.55  Aligned_cols=71  Identities=21%  Similarity=0.307  Sum_probs=54.5

Q ss_pred             HHHHHHHhHhhc-cCC-CcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          435 DDALRLCFQMYD-IDR-SGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       435 ~~~l~~~f~~~D-~d~-~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      .++++.+|+.|| +|+ +|+|+.+||..++.......... ..++++++.+|+.+|.|+||.|+|+||..+|..
T Consensus         8 ~~~l~~~F~~fD~~dgd~G~I~~~El~~~l~~~~~~~lg~-~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~   80 (95)
T 1j55_A            8 MGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQS-GKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAA   80 (95)
T ss_dssp             HHHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC-------CHHHHHHHHHCSSSSSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhccCCCCCcCCHHHHHHHHHHHhHhhccc-ccCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH
Confidence            357899999999 788 58999999999998621110000 135568999999999999999999999999875

>1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A

Probab=99.03  E-value=4e-10  Score=86.29  Aligned_cols=71  Identities=17%  Similarity=0.069  Sum_probs=65.4

Q ss_pred             CCCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcch---HHHHHHHHcCCCCcceeHHHHHHHHhh
Q 009980          357 HDLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPL---APRIFDLFDNNRDGTVDMREILCGFSS  428 (521)
Q Consensus       357 ~~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~---~~~~f~~~D~~~~g~I~~~ef~~~~~~  428 (521)
                      ..++++++.+++.+|..+|.|++| |+..||..+|+.+|...+..+   +..+|..+|.|++|.|+| ||+.++..
T Consensus         6 ~~l~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~d~~~~g~i~~-eF~~~~~~   80 (86)
T 1j7q_A            6 RALGPEEKDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEARGPKGDKKNIGPE-EWLTLCSK   80 (86)
T ss_dssp             CCCSSTHHHHHHHHHHHHSTTTTSCBCHHHHHHHHHHTSCCCSHHHHHHHHHHHHCSSCSSCCBCTT-HHHHHHHH
T ss_pred             ccCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCCCcCCH-HHHHHHHH
Confidence            457788899999999999999999 999999999999999888888   999999999999999999 99988765

>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5

Probab=99.03  E-value=9.2e-10  Score=79.67  Aligned_cols=64  Identities=23%  Similarity=0.396  Sum_probs=46.1

Q ss_pred             hHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHh
Q 009980          401 LAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRA  464 (521)
Q Consensus       401 ~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~  464 (521)
                      .+.++|+.+|.|++|.|+.+||..++..++...+.+++..+|+.+|.|++|.|+++||..++..
T Consensus         2 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~   65 (67)
T 1tiz_A            2 SAKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEK   65 (67)
T ss_dssp             THHHHHHHHCTTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred             HHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence            3566777777777777777777777776666666677777777777777777777777776653

>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6

Probab=99.02  E-value=3.1e-10  Score=91.00  Aligned_cols=65  Identities=25%  Similarity=0.283  Sum_probs=57.3

Q ss_pred             cHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          434 GDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       434 ~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      ..++++.+|+.||+|++|+|+.+|++.++..++        .+++++..+++.+|.|+||.|+|+||+.+|..
T Consensus        20 ~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g--------l~~~el~~i~~~~D~d~dG~I~~~EF~~~m~~   84 (110)
T 1iq3_A           20 QREYYVNQFRSLQPDPSSFISGSVAKNFFTKSK--------LSIPELSYIWELSDADCDGALTLPEFCAAFHL   84 (110)
T ss_dssp             SHHHHHHHHHHHCCSSSSEEEHHHHHHHCCSSS--------CSSCCHHHHHHHHCSSSCSEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcC--------CCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence            456799999999999999999999999987653        34458999999999999999999999998864

>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A

Probab=99.02  E-value=5.1e-10  Score=119.47  Aligned_cols=128  Identities=9%  Similarity=0.102  Sum_probs=103.0

Q ss_pred             hhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHH-------cCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHh
Q 009980          373 TICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLF-------DNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQM  444 (521)
Q Consensus       373 ~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~-------D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~  444 (521)
                      .+|.|+|| |+.+|+...++..+..  ..++.++++..       |.+++|.|+|+||...+..+..   .++++.+|+.
T Consensus       163 ~fd~n~dG~Is~kEl~~~l~~~~~~--~~el~~~~~~~~~~~~k~D~~~~g~L~FeEF~~f~~~L~~---R~EI~eiF~~  237 (816)
T 3qr0_A          163 TTVEMEKNKIPVKAIQKCLSKDKDD--RARISKALEKIGWPSGKNDAIDLKAFDFDTFFKFYLALLE---RSEIEGIFKE  237 (816)
T ss_dssp             HHTSCCSSEEEHHHHHHHHCSCHHH--HHHHHHHHHHHTSCCSTTCEEETTTCCHHHHHHHHHHHCC---CTHHHHHHHH
T ss_pred             hccCCCCCCCCHHHHHHHHHhcCCh--HHHHHHHHHHhcccccccccCCCCcCCHHHHHHHHHhcCC---HHHHHHHHHH
Confidence            47899999 9999999988764311  24577788877       6778999999999999987643   3579999999


Q ss_pred             hccCCCcceeHHHHHHHHHhCCCCCCCCC----CCChhHHHHHHHHhcC--C----CCcceeHHHHHHHHhc
Q 009980          445 YDIDRSGCITKEEVASMLRALPDDCLPVD----ITEPGKLDEIFDLMDA--N----NDGKVTFDEFRAAMQR  506 (521)
Q Consensus       445 ~D~d~~G~I~~~e~~~~l~~~~~~~~~~~----~~~~~~~~~~f~~~D~--~----~dG~I~~~Ef~~~~~~  506 (521)
                      ||.|++|.||. ||..+|...+......+    ..+++++..+++.+|.  |    ++|.|++++|..+|..
T Consensus       238 y~~dg~~~mT~-eL~~FL~~~Q~E~~~~~~~~~~~t~e~~~~iI~kye~~~~~~~~~~g~LsldgF~~yL~S  308 (816)
T 3qr0_A          238 LSKNKGNITTV-MFRDFLNDMQRHPSLHKTLFPLYTDAQCEALINDYESAVNKKGKKKGQLTKEGLLYFLMC  308 (816)
T ss_dssp             HTTTSSSEEHH-HHHHHHHHTSSCTTSCTTTSCCCCHHHHHHHHHHHHHHHHGGGCBTTEECHHHHHHHHHS
T ss_pred             HccCCCCcccH-HHHHHHHHhCCccccccccccccCHHHHHHHHHHhccccchhhhccCCccHHHHHHHhhc
Confidence            99999999999 99999998764321111    1467789999999887  5    7899999999999986

>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1

Probab=99.01  E-value=5.5e-10  Score=123.42  Aligned_cols=108  Identities=17%  Similarity=0.270  Sum_probs=92.6

Q ss_pred             chHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhH
Q 009980          400 PLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGK  479 (521)
Q Consensus       400 ~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~  479 (521)
                      ..+..+|+.+|.|++|.|+.+||..++..++...++.++..+|+.+|.|++|.|+++||..++......     ....+.
T Consensus       725 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~~-----~~~~~~  799 (863)
T 1sjj_A          725 NEFRASFNHFDRKKTGMMDCEDFRACLISMGYNMGEAEFARIMSIVDPNRMGVVTFQAFIDFMSRETAD-----TDTADQ  799 (863)
T ss_dssp             HHHHHHHTTTCSSSSSEEESTTHHHHHHHHTCCCCTHHHHHHHHHHCTTSCSEEETTHHHHTHHHHSTT-----CSSSHH
T ss_pred             HHHHHHHHHHCCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcC-----CCCHHH
Confidence            356789999999999999999999999998888888999999999999999999999999988764322     134568


Q ss_pred             HHHHHHHhcCCCCcceeHHHHHHHHhcCccHHHHHHHhhh
Q 009980          480 LDEIFDLMDANNDGKVTFDEFRAAMQRDSSLQDVVLSSLR  519 (521)
Q Consensus       480 ~~~~f~~~D~~~dG~I~~~Ef~~~~~~~~~~~~~~~~~~~  519 (521)
                      +..+|+.+ .|+||+|+.+||..++.      +++++.|+
T Consensus       800 l~~aF~~~-~d~~G~Is~~El~~~l~------~~~~~~l~  832 (863)
T 1sjj_A          800 VMASFKIL-AGDKNYITVDELRRELP------PDQAEYCI  832 (863)
T ss_dssp             HHHHHHGG-GTSSSEEEHHHHHHHSC------HHHHHHHH
T ss_pred             HHHHHHHH-hCCCCcCcHHHHHHHCC------HHHHHHHH
Confidence            99999999 89999999999999985      45555554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	521
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	9e-85
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	2e-76
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	1e-73
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	1e-73
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	7e-72
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	6e-71
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	2e-70
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	3e-70
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	5e-69
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	8e-68
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	2e-67
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	4e-67
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	8e-67
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	1e-63
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	1e-63
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	2e-61
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	1e-60
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	2e-59
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	5e-59
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	1e-58
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	2e-58
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	1e-57
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	8e-57
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	1e-56
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	8e-55
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	3e-54
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	5e-54
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	8e-53
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	2e-52
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	3e-52
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	4e-52
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	5e-52
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	7e-52
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	2e-51
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	3e-51
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	7e-51
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	1e-50
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	1e-50
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	1e-50
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	1e-50
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	3e-50
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	7e-50
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	8e-50
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	9e-50
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	2e-49
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	2e-49
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	1e-48
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	2e-48
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	4e-48
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	8e-48
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	2e-46
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	4e-46
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	4e-45
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	2e-43
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	2e-43
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	4e-43
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	5e-43
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	6e-43
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	8e-43
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	1e-37
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	1e-37
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	1e-36
d1g8ia_	187	a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1	3e-28
d1bjfa_	181	a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId	4e-27
d1s6ca_	178	a.39.1.5 (A:) Kchip1, Kv4 potassium channel-intera	7e-27
d1fpwa_	190	a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1	1e-25
d1omra_	201	a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId:	2e-25
d1jbaa_	189	a.39.1.5 (A:) Guanylate cyclase activating protein	3e-22
d2zfda1	183	a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {	3e-21
d1xo5a_	180	a.39.1.5 (A:) Calcium- and integrin-binding protei	4e-20
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	4e-19
d1topa_	162	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	3e-18
d1topa_	162	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	8e-06
d1exra_	146	a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetr	1e-16
d1exra_	146	a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetr	2e-08
d1exra_	146	a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetr	3e-04
d1exra_	146	a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetr	0.003
d2obha1	141	a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapien	3e-16
d2obha1	141	a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapien	2e-07
d1dtla_	156	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	4e-16
d1dtla_	156	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	3e-05
d1lkja_	146	a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharom	1e-14
d1pvaa_	109	a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax	2e-14
d1pvaa_	109	a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax	6e-06
d5pala_	109	a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis	2e-14
d1auib_	165	a.39.1.5 (B:) Calcineurin regulatory subunit (B-ch	6e-14
d1qxpa2	188	a.39.1.8 (A:515-702) Calpain large subunit, C-term	7e-14
d1rroa_	108	a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus)	4e-13
d1rroa_	108	a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus)	1e-06
d1c7va_	68	a.39.1.5 (A:) Calcium vector protein {Amphioxus (B	4e-13
d1c7va_	68	a.39.1.5 (A:) Calcium vector protein {Amphioxus (B	3e-06
d2pvba_	107	a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax	9e-13
d2pvba_	107	a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax	3e-06
d1oqpa_	77	a.39.1.5 (A:) Caltractin (centrin 2) {Green algae	2e-12
d1oqpa_	77	a.39.1.5 (A:) Caltractin (centrin 2) {Green algae	2e-07
d1oqpa_	77	a.39.1.5 (A:) Caltractin (centrin 2) {Green algae	0.002
d1snla_	99	a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo	3e-12
d1rwya_	109	a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [Ta	4e-12
d1tiza_	67	a.39.1.5 (A:) Calmodulin-related protein T21P5.17	6e-12
d1tiza_	67	a.39.1.5 (A:) Calmodulin-related protein T21P5.17	3e-08
d1tiza_	67	a.39.1.5 (A:) Calmodulin-related protein T21P5.17	0.003
d1s6ia_	182	a.39.1.5 (A:) Calcium-dependent protein kinase sk5	7e-12
d2scpa_	174	a.39.1.5 (A:) Sarcoplasmic calcium-binding protein	9e-12
d2scpa_	174	a.39.1.5 (A:) Sarcoplasmic calcium-binding protein	6e-07
d2scpa_	174	a.39.1.5 (A:) Sarcoplasmic calcium-binding protein	4e-06
d2scpa_	174	a.39.1.5 (A:) Sarcoplasmic calcium-binding protein	2e-04
d1nyaa_	176	a.39.1.5 (A:) Calerythrin {Saccharopolyspora eryth	1e-11
d1nyaa_	176	a.39.1.5 (A:) Calerythrin {Saccharopolyspora eryth	1e-05
d1fi5a_	81	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus),	1e-11
d1fi5a_	81	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus),	6e-07
d2opoa1	81	a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Che	3e-11
d2opoa1	81	a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Che	7e-08
d1jc2a_	75	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	5e-11
d1jc2a_	75	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	3e-07
d1uhka1	187	a.39.1.5 (A:3-189) Calcium-regulated photoprotein	8e-11
d1ij5a_	321	a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-bind	9e-11
d1ij5a_	321	a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-bind	4e-06
d1ij5a_	321	a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-bind	0.001
d1ij5a_	321	a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-bind	0.002
d1juoa_	172	a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId:	3e-10
d2sasa_	185	a.39.1.5 (A:) Sarcoplasmic calcium-binding protein	3e-10
d2sasa_	185	a.39.1.5 (A:) Sarcoplasmic calcium-binding protein	0.004
d1k94a_	165	a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [Ta	6e-10
d1k94a_	165	a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [Ta	2e-05
d1s6ja_	87	a.39.1.5 (A:) Calcium-dependent protein kinase sk5	8e-10
d1s6ja_	87	a.39.1.5 (A:) Calcium-dependent protein kinase sk5	2e-05
d1s6ja_	87	a.39.1.5 (A:) Calcium-dependent protein kinase sk5	2e-04
d1df0a1	186	a.39.1.8 (A:515-700) Calpain large subunit, C-term	1e-09
d1cb1a_	78	a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [Tax	1e-09
d1psra_	100	a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien	1e-09
d1ksoa_	93	a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien	3e-09
d1fw4a_	65	a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId:	3e-09
d1fw4a_	65	a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId:	7e-06
d3c1va1	93	a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sa	4e-09
d1wdcb_	142	a.39.1.5 (B:) Myosin Essential Chain {Bay scallop	5e-09
d1avsa_	81	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	5e-09
d1avsa_	81	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	3e-06
d1jfja_	134	a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histoly	7e-09
d1jfja_	134	a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histoly	2e-04
d1qv0a_	189	a.39.1.5 (A:) Calcium-regulated photoprotein {Hydr	8e-09
d1qv0a_	189	a.39.1.5 (A:) Calcium-regulated photoprotein {Hydr	7e-04
d1qx2a_	76	a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [Tax	1e-08
d1a4pa_	92	a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien	3e-08
d1f54a_	77	a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharom	4e-08
d1f54a_	77	a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharom	9e-06
d2fcea1	61	a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [	1e-07
d2fcea1	61	a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [	4e-05
d1yuta1	98	a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sa	1e-07
d1wdcc_	152	a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop	1e-07
d1k8ua_	89	a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien	1e-07
d2zkmx1	170	a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human	2e-07
d1zfsa1	93	a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus no	2e-07
d1wrka1	82	a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens)	2e-07
d1wrka1	82	a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens)	2e-05
d1wrka1	82	a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens)	3e-04
d1e8aa_	87	a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien	3e-07
d1alva_	173	a.39.1.8 (A:) Calpain small (regulatory) subunit (	3e-07
d2pq3a1	73	a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [T	4e-07
d2pq3a1	73	a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [T	7e-06
d1w7jb1	139	a.39.1.5 (B:11-149) Myosin Essential Chain {Human	2e-06
d1xk4c1	83	a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sa	2e-06
d1c07a_	95	a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId:	2e-06
d1c07a_	95	a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId:	5e-05
d1qjta_	99	a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId:	4e-06
d1hqva_	181	a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mous	5e-06
d1hqva_	181	a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mous	2e-04
d1m45a_	146	a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's ye	6e-06
d1m45a_	146	a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's ye	2e-04
d1m45a_	146	a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's ye	2e-04
d1xk4a1	87	a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sa	9e-06
d1tuza_	118	a.39.1.7 (A:) Diacylglycerol kinase alpha, N-termi	1e-05
d1ggwa_	140	a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharo	2e-05
d1ggwa_	140	a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharo	0.004
d1wlza1	83	a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {H	3e-05
d1wlza1	83	a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {H	0.001
d1j55a_	94	a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien	3e-05
d3cr5x1	90	a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos tauru	3e-05
d1fi6a_	92	a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId:	8e-05
d1fi6a_	92	a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId:	4e-04
d1qlsa_	95	a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa),	3e-04
d1y1xa_	182	a.39.1.8 (A:) Programmed cell death 6 protein-like	5e-04
d1y1xa_	182	a.39.1.8 (A:) Programmed cell death 6 protein-like	0.004
d1y1xa_	182	a.39.1.8 (A:) Programmed cell death 6 protein-like	0.004
d1iq3a_	110	a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9	0.004
d2jxca1	95	a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [	0.004

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  262 bits (671), Expect = 9e-85
 Identities = 117/344 (34%), Positives = 178/344 (51%), Gaps = 39/344 (11%)

Query: 3   QETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGS 62
           ++   + D Y+  D+LG G FS V     K   +   VAIK + +               
Sbjct: 2   KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQK--LVAIKCIAK--------------- 44

Query: 63  SSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILE 122
                       K +   +  + NEI V+ KI      HPN++ L D+YE    ++LI++
Sbjct: 45  ------------KALEGKEGSMENEIAVLHKI-----KHPNIVALDDIYESGGHLYLIMQ 87

Query: 123 LCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDS 182
           L SGGELFDRIV +  Y E  A+ +I Q+ + +  LH   IVHRDLKPEN L+ +  EDS
Sbjct: 88  LVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDS 147

Query: 183 PLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYP 242
            + I DFGLS +E     +    G+  YV+PE L Q   +   D WS+GVI YILL GYP
Sbjct: 148 KIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYP 207

Query: 243 PFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
           PF  +++ +  + I+  E+ F    W +IS SAK  I  L+  DP +R + ++ L HPW+
Sbjct: 208 PFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWI 267

Query: 303 IGDSAKEEEMDAEIVSRLQSFNARRKLRAAAIASVLSSTIFLRR 346
            GD+A ++ +   +  +++   A+ K + A      ++T  +R 
Sbjct: 268 AGDTALDKNIHQSVSEQIKKNFAKSKWKQA-----FNATAVVRH 306

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  241 bits (616), Expect = 2e-76
 Identities = 91/337 (27%), Positives = 160/337 (47%), Gaps = 41/337 (12%)

Query: 6   RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSS 65
           ++L ++Y + + LGRG F +V R ++ +  +T     K ++  G+               
Sbjct: 1   KELYEKYMIAEDLGRGEFGIVHRCVETSSKKT--YMAKFVKVKGT--------------- 43

Query: 66  SQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCS 125
                            L+  EI ++         H N++ L++ +E    + +I E  S
Sbjct: 44  --------------DQVLVKKEISILNIA-----RHRNILHLHESFESMEELVMIFEFIS 84

Query: 126 GGELFDRIVAQE-RYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPL 184
           G ++F+RI        E    + + Q+ E L  LH  NI H D++PEN ++      S +
Sbjct: 85  GLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTR-RSSTI 143

Query: 185 KIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF 244
           KI++FG +      D    LF + +Y +PE    D +++ +DMWSLG ++Y+LLSG  PF
Sbjct: 144 KIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPF 203

Query: 245 IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIG 304
           +A++N+Q  + IM  E++F E+ +K IS  A   +  LL  +   R +A E L HPW+  
Sbjct: 204 LAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWL-- 261

Query: 305 DSAKEEEMDAEIVSRLQSFNARRKLRAAAIASVLSST 341
              K E +  +++  L+       L    +  V+S+ 
Sbjct: 262 -KQKIERVSTKVIRTLKHRRYYHTLIKKDLNMVVSAA 297

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score =  235 bits (601), Expect = 1e-73
 Identities = 86/322 (26%), Positives = 149/322 (46%), Gaps = 39/322 (12%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
           D Y++ + LG G F VV R  ++  G     A K +                        
Sbjct: 26  DHYDIHEELGTGAFGVVHRVTERATGN--NFAAKFVM----------------------- 60

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
                         +  EI  M  +      HP +++L+D +ED N + +I E  SGGEL
Sbjct: 61  -----TPHESDKETVRKEIQTMSVL-----RHPTLVNLHDAFEDDNEMVMIYEFMSGGEL 110

Query: 130 FDRIVAQERYM-EVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMD 188
           F+++  +   M E  A   +RQ+ +GL  +H+ N VH DLKPEN +F      + LK++D
Sbjct: 111 FEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTK-RSNELKLID 169

Query: 189 FGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQS 248
           FGL++       V    G+ ++ +PE      +   +DMWS+GV+ YILLSG  PF  ++
Sbjct: 170 FGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEN 229

Query: 249 NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV--IGDS 306
           + +  + + + +++  +  +  IS   K  I  LL  DPN R +  + L HPW+      
Sbjct: 230 DDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAP 289

Query: 307 AKEEEMDAEIVSRLQSFNARRK 328
            ++ ++ +   ++++     + 
Sbjct: 290 GRDSQIPSSRYTKIRDSIKTKY 311

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score =  235 bits (600), Expect = 1e-73
 Identities = 94/340 (27%), Positives = 164/340 (48%), Gaps = 38/340 (11%)

Query: 4   ETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSS 63
           +   + D Y++ + LG G F VV R ++K  G       K +                  
Sbjct: 23  KQGSVYDYYDILEELGSGAFGVVHRCVEKATGR--VFVAKFIN----------------- 63

Query: 64  SSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILEL 123
                          +    + NEI +M ++      HP +I+L+D +ED+  + LILE 
Sbjct: 64  -----------TPYPLDKYTVKNEISIMNQL-----HHPKLINLHDAFEDKYEMVLILEF 107

Query: 124 CSGGELFDRIVAQERYM-EVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDS 182
            SGGELFDRI A++  M E      +RQ  EGL  +H+ +IVH D+KPEN +    ++ S
Sbjct: 108 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIM-CETKKAS 166

Query: 183 PLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYP 242
            +KI+DFGL++     + V     + ++ +PE + ++ +   +DMW++GV+ Y+LLSG  
Sbjct: 167 SVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLS 226

Query: 243 PFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
           PF  + + +  Q +   ++ F E  + ++S  AK  I +LL  +P +R +  + L HPW+
Sbjct: 227 PFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWL 286

Query: 303 IGD-SAKEEEMDAEIVSRLQSFNARRKLRAAAIASVLSST 341
            GD S     + +   ++++     +     A    +   
Sbjct: 287 KGDHSNLTSRIPSSRYNKIRQKIKEKYADWPAPQPAIGRI 326

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  227 bits (581), Expect = 7e-72
 Identities = 86/303 (28%), Positives = 141/303 (46%), Gaps = 41/303 (13%)

Query: 6   RKLT-DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSS 64
           R+   +++E+   LG+G F  V    +K       +A+K L +                 
Sbjct: 1   RQWALEDFEIGRPLGKGKFGNVYLAREKQSKF--ILALKVLFK----------------- 41

Query: 65  SSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELC 124
                    + + +  +  L  E+ +   +      HPN++ LY  + D   V+LILE  
Sbjct: 42  --------AQLEKAGVEHQLRREVEIQSHL-----RHPNILRLYGYFHDATRVYLILEYA 88

Query: 125 SGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPL 184
             G ++  +    ++ E   A  I ++A  L+  H   ++HRD+KPEN L         L
Sbjct: 89  PLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL---GSAGEL 145

Query: 185 KIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF 244
           KI DFG  SV   +     L G++DY+ PE +       K D+WSLGV+ Y  L G PPF
Sbjct: 146 KIADFGW-SVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 204

Query: 245 IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIG 304
            A + ++  + I   EF+F       ++  A+ LIS LL  +P++RP  +E+L HPW+  
Sbjct: 205 EANTYQETYKRISRVEFTF----PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 260

Query: 305 DSA 307
           +S+
Sbjct: 261 NSS 263

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  226 bits (576), Expect = 6e-71
 Identities = 82/303 (27%), Positives = 126/303 (41%), Gaps = 42/303 (13%)

Query: 3   QETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGS 62
           Q  +K  ++++   ILG G FS V    +       + AIK L +            R  
Sbjct: 1   QPRKKRPEDFKFGKILGEGSFSTVVLARELATSR--EYAIKILEK------------RHI 46

Query: 63  SSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILE 122
              +++ +              T E  VM ++      HP  + LY  ++D   ++  L 
Sbjct: 47  IKENKVPYV-------------TRERDVMSRL-----DHPFFVKLYFTFQDDEKLYFGLS 88

Query: 123 LCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDS 182
               GEL   I     + E        +I   L  LH   I+HRDLKPEN L     ED 
Sbjct: 89  YAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL---NEDM 145

Query: 183 PLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS 239
            ++I DFG + V   E          G+  YVSPE L +      SD+W+LG I+Y L++
Sbjct: 146 HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 205

Query: 240 GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH 299
           G PPF A +     Q I+  E+ F     +     A+ L+  LL +D  +R   +E+  +
Sbjct: 206 GLPPFRAGNEYLIFQKIIKLEYDF----PEKFFPKARDLVEKLLVLDATKRLGCEEMEGY 261

Query: 300 PWV 302
             +
Sbjct: 262 GPL 264

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  224 bits (572), Expect = 2e-70
 Identities = 100/298 (33%), Positives = 148/298 (49%), Gaps = 34/298 (11%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
           + YE  +ILGRG  SVVRR I K   +  + A+K +                    +  G
Sbjct: 3   ENYEPKEILGRGVSSVVRRCIHKPTCK--EYAVKIIDV------------------TGGG 42

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
            F   +   + +A L  E+ ++RK+    S HPN+I L D YE      L+ +L   GEL
Sbjct: 43  SFSAEEVQELREATL-KEVDILRKV----SGHPNIIQLKDTYETNTFFFLVFDLMKKGEL 97

Query: 130 FDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDF 189
           FD +  +    E     ++R + E + ALH+ NIVHRDLKPEN L     +D  +K+ DF
Sbjct: 98  FDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILL---DDDMNIKLTDF 154

Query: 190 GLSSVEGYTDPVVGLFGSIDYVSPEALL------QDRITSKSDMWSLGVILYILLSGYPP 243
           G S      + +  + G+  Y++PE +             + DMWS GVI+Y LL+G PP
Sbjct: 155 GFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 214

Query: 244 FIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPW 301
           F  +      +MIM+G + F    W + S + K L+S  L V P +R +A+E L HP+
Sbjct: 215 FWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPF 272

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  224 bits (572), Expect = 3e-70
 Identities = 99/296 (33%), Positives = 161/296 (54%), Gaps = 30/296 (10%)

Query: 8   LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQ 67
           + D Y+  + LG G F+VV++  +K+ G   Q A K +++  + +               
Sbjct: 8   VDDYYDTGEELGSGQFAVVKKCREKSTGL--QYAAKFIKKRRTKS--------------- 50

Query: 68  IGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGG 127
                   +  VS   +  E+ ++++I      HPNVI L++VYE++  V LILEL +GG
Sbjct: 51  -------SRRGVSREDIEREVSILKEI-----QHPNVITLHEVYENKTDVILILELVAGG 98

Query: 128 ELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSP-LKI 186
           ELFD +  +E   E  A   ++QI  G+  LH   I H DLKPEN + L+     P +KI
Sbjct: 99  ELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKI 158

Query: 187 MDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIA 246
           +DFGL+    + +    +FG+ ++V+PE +  + +  ++DMWS+GVI YILLSG  PF+ 
Sbjct: 159 IDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 218

Query: 247 QSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
            + ++    + A  + F ++ + N S+ AK  I  LL  DP +R + Q+ L HPW+
Sbjct: 219 DTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 274

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  221 bits (564), Expect = 5e-69
 Identities = 79/316 (25%), Positives = 130/316 (41%), Gaps = 47/316 (14%)

Query: 9   TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQI 68
            D +E+   LG G F  V +   K        A K +                       
Sbjct: 11  EDFWEIIGELGDGAFGKVYKAQNKETSV--LAAAKVIDT--------------------- 47

Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
                + +  + D +   EI ++         HPN++ L D +  +N + +++E C+GG 
Sbjct: 48  -----KSEEELEDYM--VEIDILASC-----DHPNIVKLLDAFYYENNLWILIEFCAGGA 95

Query: 129 LFDRIVAQERYM-EVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIM 187
           +   ++  ER + E     V +Q  + L  LH   I+HRDLK  N LF  D +   +K+ 
Sbjct: 96  VDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGD---IKLA 152

Query: 188 DFGLSSVEGYTDPVVGLF-GSIDYVSPEALL-----QDRITSKSDMWSLGVILYILLSGY 241
           DFG+S+    T      F G+  +++PE ++           K+D+WSLG+ L  +    
Sbjct: 153 DFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIE 212

Query: 242 PPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPW 301
           PP    +  +    I   E     Q     SS+ K  +   L  + + R +  +LL HP+
Sbjct: 213 PPHHELNPMRVLLKIAKSEPPTLAQ-PSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPF 271

Query: 302 VIGDSAKE-EEMDAEI 316
           V  DS K   E+ AE 
Sbjct: 272 VTVDSNKPIRELIAEA 287

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  217 bits (554), Expect = 8e-68
 Identities = 77/297 (25%), Positives = 127/297 (42%), Gaps = 42/297 (14%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
           +++++   LG G +  V+  + +   E   VA+K +                        
Sbjct: 5   EDWDLVQTLGEGAYGEVQLAVNRVTEE--AVAVKIVDM---------------------- 40

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
                K+       +  EI + + +      H NV+  Y    + N  +L LE CSGGEL
Sbjct: 41  -----KRAVDCPENIKKEICINKML-----NHENVVKFYGHRREGNIQYLFLEYCSGGEL 90

Query: 130 FDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDF 189
           FDRI       E  A     Q+  G+  LH   I HRD+KPEN L     E   LKI DF
Sbjct: 91  FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDF 147

Query: 190 GLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRI-TSKSDMWSLGVILYILLSGYPPFI 245
           GL++V         +  + G++ YV+PE L +        D+WS G++L  +L+G  P+ 
Sbjct: 148 GLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 207

Query: 246 AQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
             S+  ++      + ++    WK I S+   L+  +L  +P+ R +  ++    W 
Sbjct: 208 QPSDSCQEYSDWKEKKTYLNP-WKKIDSAPLALLHKILVENPSARITIPDIKKDRWY 263

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  217 bits (553), Expect = 2e-67
 Identities = 69/295 (23%), Positives = 131/295 (44%), Gaps = 41/295 (13%)

Query: 9   TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQI 68
             +Y   + +G+G    V   +    G+  +VAI+ +                       
Sbjct: 19  KKKYTRFEKIGQGASGTVYTAMDVATGQ--EVAIRQMN---------------------- 54

Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
                  Q      L+ NEILVMR+       +PN+++  D Y   + + +++E  +GG 
Sbjct: 55  ------LQQQPKKELIINEILVMREN-----KNPNIVNYLDSYLVGDELWVVMEYLAGGS 103

Query: 129 LFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMD 188
           L D +V +    E   AAV R+  + L  LH   ++HRD+K +N L      D  +K+ D
Sbjct: 104 LTD-VVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL---GMDGSVKLTD 159

Query: 189 FGLS-SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQ 247
           FG    +         + G+  +++PE + +     K D+WSLG++   ++ G PP++ +
Sbjct: 160 FGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE 219

Query: 248 SNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
           +  +   +I        +   + +S+  +  ++  L +D  +R SA+ELL H ++
Sbjct: 220 NPLRALYLIATNGTPELQN-PEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFL 273

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  218 bits (555), Expect = 4e-67
 Identities = 96/361 (26%), Positives = 161/361 (44%), Gaps = 51/361 (14%)

Query: 4   ETRKLTDEYEVTD-ILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGS 62
           +   + D+Y+VT  +LG G    V +   K   E  + A+K L+                
Sbjct: 5   KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQE--KFALKMLQDC-------------- 48

Query: 63  SSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYED----QNGVH 118
                                   E+ +  +  +     P+++ + DVYE+    +  + 
Sbjct: 49  -------------------PKARREVELHWRASQ----CPHIVRIVDVYENLYAGRKCLL 85

Query: 119 LILELCSGGELFDRIVAQ--ERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFL 176
           +++E   GGELF RI  +  + + E  A+ +++ I E +  LH  NI HRD+KPEN L+ 
Sbjct: 86  IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 145

Query: 177 NDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYI 236
           + R ++ LK+ DFG +      + +     +  YV+PE L  ++     DMWSLGVI+YI
Sbjct: 146 SKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYI 205

Query: 237 LLSGYPPFIAQSNRQK----QQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPS 292
           LL GYPPF +          +  I  G++ F    W  +S   K LI +LL  +P +R +
Sbjct: 206 LLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMT 265

Query: 293 AQELLNHPWVIGDSAKEEEMDAEIVSRLQSFNARRKLRAAAIASVLSSTIFLRRTKKLKN 352
             E +NHPW++  S K  +        L+    R +     + S L++        K+K 
Sbjct: 266 ITEFMNHPWIM-QSTKVPQTPLHTSRVLKEDKERWEDVKEEMTSALATMRVDYEQIKIKK 324

Query: 353 L 353
           +
Sbjct: 325 I 325

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  216 bits (550), Expect = 8e-67
 Identities = 78/330 (23%), Positives = 127/330 (38%), Gaps = 49/330 (14%)

Query: 9   TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQI 68
              +     +G G F  V         E   VAIK +                       
Sbjct: 14  EKLFSDLREIGHGSFGAVYFARDVRNSE--VVAIKKMS---------------------- 49

Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
               + KQ +     +  E+  ++K+      HPN I     Y  ++   L++E C G  
Sbjct: 50  ---YSGKQSNEKWQDIIKEVRFLQKLR-----HPNTIQYRGCYLREHTAWLVMEYCLGSA 101

Query: 129 LFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMD 188
                V ++   EV  AAV     +GLA LH  N++HRD+K  N L     E   +K+ D
Sbjct: 102 SDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILL---SEPGLVKLGD 158

Query: 189 FGLSSVEGYTDPVVGLFGSIDYVSPEALL---QDRITSKSDMWSLGVILYILLSGYPPFI 245
           FG +S+    +  V   G+  +++PE +L   + +   K D+WSLG+    L    PP  
Sbjct: 159 FGSASIMAPANSFV---GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLF 215

Query: 246 AQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGD 305
             +       I   E    +    + S   +  + S L   P  RP+++ LL H +V+ +
Sbjct: 216 NMNAMSALYHIAQNESPALQ--SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE 273

Query: 306 SAKEEEMDA-----EIVSRLQSFNARRKLR 330
                 MD      + V  L +    RK++
Sbjct: 274 RPPTVIMDLIQRTKDAVRELDNLQ-YRKMK 302

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  208 bits (530), Expect = 1e-63
 Identities = 66/355 (18%), Positives = 121/355 (34%), Gaps = 83/355 (23%)

Query: 9   TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQI 68
            D++E    LG G   VV +   K  G    +A K +                       
Sbjct: 5   DDDFEKISELGAGNGGVVFKVSHKPSGLV--MARKLIHL--------------------- 41

Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
                 K    +  +   E+ V+ +        P ++  Y  +     + + +E   GG 
Sbjct: 42  ----EIKPAIRNQII--RELQVLHECN-----SPYIVGFYGAFYSDGEISICMEHMDGGS 90

Query: 129 LFDRIVAQERYMEVGAAAVIRQIAEGLAALHQAN-IVHRDLKPENCLFLNDREDSPLKIM 187
           L   +    R  E     V   + +GL  L + + I+HRD+KP N L  +  E   +K+ 
Sbjct: 91  LDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE---IKLC 147

Query: 188 DFGLSS--VEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFI 245
           DFG+S   ++   +  V   G+  Y+SPE L     + +SD+WS+G+ L  +  G  P  
Sbjct: 148 DFGVSGQLIDSMANSFV---GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIP 204

Query: 246 AQSNRQKQQMIMAGEFSFYEQT-------------------------------------- 267
               ++ + M          +T                                      
Sbjct: 205 PPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPK 264

Query: 268 --WKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAKEEEMDAEIVSRL 320
                 S   +  ++  L  +P  R   ++L+ H ++    A+E +    + S +
Sbjct: 265 LPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEEVDFAGWLCSTI 319

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  206 bits (525), Expect = 1e-63
 Identities = 73/305 (23%), Positives = 129/305 (42%), Gaps = 51/305 (16%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
           ++YEV   +G G +   ++  +K+ G+   +  K L                        
Sbjct: 4   EDYEVLYTIGTGSYGRCQKIRRKSDGK--ILVWKELDY---------------------- 39

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNG--VHLILELCSGG 127
                        +L +E+ ++R++      HPN++  YD   D+    +++++E C GG
Sbjct: 40  ----GSMTEAEKQMLVSEVNLLREL-----KHPNIVRYYDRIIDRTNTTLYIVMEYCEGG 90

Query: 128 ELFDRIVAQER----YMEVGAAAVIRQIAEGLAALHQ-----ANIVHRDLKPENCLFLND 178
           +L   I    +      E     V+ Q+   L   H+       ++HRDLKP N      
Sbjct: 91  DLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL--- 147

Query: 179 REDSPLKIMDFGLSSVEGYTDPVV-GLFGSIDYVSPEALLQDRITSKSDMWSLGVILYIL 237
                +K+ DFGL+ +  +         G+  Y+SPE + +     KSD+WSLG +LY L
Sbjct: 148 DGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 207

Query: 238 LSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELL 297
            +  PPF A S ++    I  G+F          S    ++I+ +L +    RPS +E+L
Sbjct: 208 CALMPPFTAFSQKELAGKIREGKFRRI---PYRYSDELNEIITRMLNLKDYHRPSVEEIL 264

Query: 298 NHPWV 302
            +P +
Sbjct: 265 ENPLI 269

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  202 bits (515), Expect = 2e-61
 Identities = 73/318 (22%), Positives = 126/318 (39%), Gaps = 43/318 (13%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
           +++ +  +LG+G F  V     K   +    AIK L++           +          
Sbjct: 2   EDFILHKMLGKGSFGKVFLAEFKKTNQ--FFAIKALKKDVVLMDDDVECTM--------- 50

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
                            E  V+    E    HP +  ++  ++ +  +  ++E  +GG+L
Sbjct: 51  ----------------VEKRVLSLAWE----HPFLTHMFCTFQTKENLFFVMEYLNGGDL 90

Query: 130 FDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDF 189
              I +  ++    A     +I  GL  LH   IV+RDLK +N L     +D  +KI DF
Sbjct: 91  MYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILL---DKDGHIKIADF 147

Query: 190 GLSSVEGYTDPVVGLF-GSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQS 248
           G+       D     F G+ DY++PE LL  +     D WS GV+LY +L G  PF  Q 
Sbjct: 148 GMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQD 207

Query: 249 NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSA-QELLNHPWVIG--- 304
             +    I      +     + +   AK L+  L   +P +R     ++  HP       
Sbjct: 208 EEELFHSIRMDNPFY----PRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREINW 263

Query: 305 DSAKEEEMDAEIVSRLQS 322
           +  + +E+D     +++S
Sbjct: 264 EELERKEIDPPFRPKVKS 281

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  199 bits (506), Expect = 1e-60
 Identities = 83/297 (27%), Positives = 130/297 (43%), Gaps = 42/297 (14%)

Query: 8   LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQ 67
           L  +Y+V  +LG GGF  V  GI+ +      VAIK + +                  S 
Sbjct: 2   LESQYQVGPLLGSGGFGSVYSGIRVSDNL--PVAIKHVEK---------------DRISD 44

Query: 68  IGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGG 127
            G  P   +V         E+++++K+    S    VI L D +E  +   LILE     
Sbjct: 45  WGELPNGTRV-------PMEVVLLKKVS---SGFSGVIRLLDWFERPDSFVLILERPEPV 94

Query: 128 -ELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKI 186
            +LFD I  +    E  A +   Q+ E +   H   ++HRD+K EN L   D     LK+
Sbjct: 95  QDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKL 152

Query: 187 MDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKS-DMWSLGVILYILLSGYPPFI 245
           +DFG  ++   T       G+  Y  PE +   R   +S  +WSLG++LY ++ G  PF 
Sbjct: 153 IDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 211

Query: 246 AQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
                 + Q+             + +SS  + LI   L + P+ RP+ +E+ NHPW+
Sbjct: 212 HDEEIIRGQVFF----------RQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 258

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  196 bits (500), Expect = 2e-59
 Identities = 72/297 (24%), Positives = 127/297 (42%), Gaps = 46/297 (15%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
            ++++   LG G F  V     +  G     A+K L++                   Q+ 
Sbjct: 4   QDFQILRTLGTGSFGRVHLIRSRHNGR--YYAMKVLKK------------EIVVRLKQVE 49

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
                           +E L++  +      HP +I ++  ++D   + +I++   GGEL
Sbjct: 50  HT-------------NDERLMLSIVT-----HPFIIRMWGTFQDAQQIFMIMDYIEGGEL 91

Query: 130 FDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDF 189
           F  +   +R+    A     ++   L  LH  +I++RDLKPEN L     ++  +KI DF
Sbjct: 92  FSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILL---DKNGHIKITDF 148

Query: 190 GLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSN 249
           G +      D    L G+ DY++PE +         D WS G+++Y +L+GY PF   + 
Sbjct: 149 GFAKY--VPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT 206

Query: 250 RQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR-----PSAQELLNHPW 301
            +  + I+  E  F        +   K L+S L+T D ++R        +++ NHPW
Sbjct: 207 MKTYEKILNAELRF----PPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPW 259

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  194 bits (494), Expect = 5e-59
 Identities = 58/296 (19%), Positives = 114/296 (38%), Gaps = 44/296 (14%)

Query: 12  YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFF 71
            +    +GRG F  V +G+        +VA   L+                         
Sbjct: 11  LKFDIEIGRGSFKTVYKGLDTETTV--EVAWCELQD------------------------ 44

Query: 72  PTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYED----QNGVHLILELCSGG 127
             RK           E  +++ +      HPN++  YD +E     +  + L+ EL + G
Sbjct: 45  --RKLTKSERQRFKEEAEMLKGLQ-----HPNIVRFYDSWESTVKGKKCIVLVTELMTSG 97

Query: 128 ELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQAN--IVHRDLKPENCLFLNDREDSPLK 185
            L   +   +        +  RQI +GL  LH     I+HRDLK +N           +K
Sbjct: 98  TLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFI--TGPTGSVK 155

Query: 186 IMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFI 245
           I D GL++++        + G+ ++++PE + +++     D+++ G+ +  + +   P+ 
Sbjct: 156 IGDLGLATLKR-ASFAKAVIGTPEFMAPE-MYEEKYDESVDVYAFGMCMLEMATSEYPYS 213

Query: 246 AQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPW 301
              N  +    +           K      K++I   +  + + R S ++LLNH +
Sbjct: 214 ECQNAAQIYRRVT-SGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAF 268

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  193 bits (492), Expect = 1e-58
 Identities = 71/303 (23%), Positives = 128/303 (42%), Gaps = 49/303 (16%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
            +  V   +G G F  V +G          VA+K L                + +  Q+ 
Sbjct: 8   GQITVGQRIGSGSFGTVYKGKWH-----GDVAVKMLNV-------------TAPTPQQLQ 49

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
            F              NE+ V+RK       H N++     Y     + ++ + C G  L
Sbjct: 50  AF-------------KNEVGVLRKT-----RHVNILLFMG-YSTAPQLAIVTQWCEGSSL 90

Query: 130 FDRIVAQERYMEVGAAAVI-RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMD 188
           +  +   E   E+     I RQ A+G+  LH  +I+HRDLK  N       ED  +KI D
Sbjct: 91  YHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGD 147

Query: 189 FGLSSV---EGYTDPVVGLFGSIDYVSPEALL---QDRITSKSDMWSLGVILYILLSGYP 242
           FGL++V      +     L GSI +++PE +    ++  + +SD+++ G++LY L++G  
Sbjct: 148 FGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 207

Query: 243 PFIAQSNRQKQQMIMAGEFSF--YEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHP 300
           P+   +NR +   ++   +      +   N   + K+L++  L    + RP   ++L   
Sbjct: 208 PYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 267

Query: 301 WVI 303
            ++
Sbjct: 268 ELL 270

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  196 bits (498), Expect = 2e-58
 Identities = 72/298 (24%), Positives = 122/298 (40%), Gaps = 40/298 (13%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
           +++ V  I+GRGGF  V    K   G+    A+K L +                      
Sbjct: 4   NDFSVHRIIGRGGFGEVYGCRKADTGK--MYAMKCLDK---------------------- 39

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
               R ++   + L  NE +++  +       P ++ +   +   + +  IL+L +GG+L
Sbjct: 40  ---KRIKMKQGETLALNERIMLSLVSTG--DCPFIVCMSYAFHTPDKLSFILDLMNGGDL 94

Query: 130 FDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDF 189
              +     + E        +I  GL  +H   +V+RDLKP N L     E   ++I D 
Sbjct: 95  HYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDL 151

Query: 190 GLSSVEGYTDPVVGLFGSIDYVSPEALLQDR-ITSKSDMWSLGVILYILLSGYPPFIAQS 248
           GL+       P     G+  Y++PE L +     S +D +SLG +L+ LL G+ PF    
Sbjct: 152 GLACDFSKKKPHA-SVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHK 210

Query: 249 NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPS-----AQELLNHPW 301
            +  +  I     +   +   + S   + L+  LL  D NRR       AQE+   P+
Sbjct: 211 TKD-KHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPF 267

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  191 bits (485), Expect = 1e-57
 Identities = 65/301 (21%), Positives = 108/301 (35%), Gaps = 37/301 (12%)

Query: 7   KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSS 66
            L+D YE+ +ILG GG S V             VA+K LR   +  P             
Sbjct: 4   HLSDRYELGEILGFGGMSEVHLARDLRLHR--DVAVKVLRADLARDP------------- 48

Query: 67  QIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNG----VHLILE 122
                               E      +      HP ++ +YD  E +       ++++E
Sbjct: 49  ------------SFYLRFRREAQNAAAL-----NHPAIVAVYDTGEAETPAGPLPYIVME 91

Query: 123 LCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDS 182
              G  L D +  +       A  VI    + L   HQ  I+HRD+KP N +        
Sbjct: 92  YVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVK 151

Query: 183 PLKIMDFGLSSVEGYTDPVVG-LFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGY 241
            +        +  G +      + G+  Y+SPE    D + ++SD++SLG +LY +L+G 
Sbjct: 152 VMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 211

Query: 242 PPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPW 301
           PPF   S        +  +        + +S+    ++   L  +P  R      +    
Sbjct: 212 PPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADL 271

Query: 302 V 302
           V
Sbjct: 272 V 272

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  190 bits (483), Expect = 8e-57
 Identities = 80/310 (25%), Positives = 134/310 (43%), Gaps = 41/310 (13%)

Query: 2   GQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQ-VAIKTLRRIGSTTPYGFPGSR 60
           G   +   + +E+  +LG G +  V    K +  +T +  A+K L+              
Sbjct: 16  GHAEKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLK-------------- 61

Query: 61  GSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLI 120
                         K   V  A  T      R+++E++   P ++ L+  ++ +  +HLI
Sbjct: 62  --------------KATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLI 107

Query: 121 LELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRE 180
           L+  +GGELF  +  +ER+ E      + +I   L  LH+  I++RD+K EN L      
Sbjct: 108 LDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILL---DS 164

Query: 181 DSPLKIMDFGLSS--VEGYTDPVVGLFGSIDYVSPEALLQDR--ITSKSDMWSLGVILYI 236
           +  + + DFGLS   V   T+      G+I+Y++P+ +           D WSLGV++Y 
Sbjct: 165 NGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYE 224

Query: 237 LLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPS---- 292
           LL+G  PF     +  Q  I            + +S+ AK LI  LL  DP +R      
Sbjct: 225 LLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPR 284

Query: 293 -AQELLNHPW 301
            A E+  H +
Sbjct: 285 DADEIKEHLF 294

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  189 bits (482), Expect = 1e-56
 Identities = 76/326 (23%), Positives = 140/326 (42%), Gaps = 49/326 (15%)

Query: 7   KLT-DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSS 65
           K+T ++++   +LG+G F  V    +K  G     A+K LR+                  
Sbjct: 1   KVTMNDFDYLKLLGKGTFGKVILVREKATGR--YYAMKILRK------------------ 40

Query: 66  SQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCS 125
                   + +V    A    E  V++        HP +  L   ++  + +  ++E  +
Sbjct: 41  ---EVIIAKDEV----AHTVTESRVLQNT-----RHPFLTALKYAFQTHDRLCFVMEYAN 88

Query: 126 GGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLK 185
           GGELF  +  +  + E  A     +I   L  LH  ++V+RD+K EN +     +D  +K
Sbjct: 89  GGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML---DKDGHIK 145

Query: 186 IMDFGLS-SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF 244
           I DFGL          +    G+ +Y++PE L  +      D W LGV++Y ++ G  PF
Sbjct: 146 ITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205

Query: 245 IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPS-----AQELLNH 299
             Q + +  ++I+  E  F     + +S  AK L++ LL  DP +R       A+E++ H
Sbjct: 206 YNQDHERLFELILMEEIRF----PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261

Query: 300 PWVIG---DSAKEEEMDAEIVSRLQS 322
            + +        ++++      ++ S
Sbjct: 262 RFFLSINWQDVVQKKLLPPFKPQVTS 287

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  184 bits (467), Expect = 8e-55
 Identities = 73/315 (23%), Positives = 109/315 (34%), Gaps = 59/315 (18%)

Query: 13  EVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFP 72
           E  D LG G F+ V +   K   +   VAIK ++                      G   
Sbjct: 1   EKLDFLGEGQFATVYKARDKNTNQ--IVAIKKIKL---------------------GHRS 37

Query: 73  TRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDR 132
             K      AL   EI +++++      HPN+I L D +  ++ + L+ +          
Sbjct: 38  EAKDGINRTAL--REIKLLQEL-----SHPNIIGLLDAFGHKSNISLVFDFMETDLEVII 90

Query: 133 IVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS 192
                        A +    +GL  LHQ  I+HRDLKP N L     E+  LK+ DFGL+
Sbjct: 91  KDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLL---DENGVLKLADFGLA 147

Query: 193 SVEGYTDPVVGLF-GSIDYVSPEALLQDR-ITSKSDMWSLGVILYILLSGYPPFIAQSNR 250
              G  +        +  Y +PE L   R      DMW++G IL  LL   P     S+ 
Sbjct: 148 KSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDL 207

Query: 251 QKQQMIMAGEFSFYEQTW------------------------KNISSSAKQLISSLLTVD 286
            +   I     +  E+ W                                 LI  L   +
Sbjct: 208 DQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFN 267

Query: 287 PNRRPSAQELLNHPW 301
           P  R +A + L   +
Sbjct: 268 PCARITATQALKMKY 282

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  182 bits (463), Expect = 3e-54
 Identities = 68/304 (22%), Positives = 117/304 (38%), Gaps = 49/304 (16%)

Query: 9   TDEYEVTDI-LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQ 67
            D   + DI LG G F  VR+G+ +   +   VAIK L++               +  + 
Sbjct: 7   RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQ--------------GTEKAD 52

Query: 68  IGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGG 127
                              E  +M ++      +P ++ L  V + +  + L++E+  GG
Sbjct: 53  TEEM-------------MREAQIMHQL-----DNPYIVRLIGVCQAEA-LMLVMEMAGGG 93

Query: 128 ELFDRIVAQERYMEVG-AAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKI 186
            L   +V +   + V   A ++ Q++ G+  L + N VHRDL   N L +N       KI
Sbjct: 94  PLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYA---KI 150

Query: 187 MDFGLSSVEGYTDPV----VGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GY 241
            DFGLS   G  D            + + +PE +   + +S+SD+WS GV ++  LS G 
Sbjct: 151 SDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQ 210

Query: 242 PPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL---LN 298
            P+      +    I  G+     +           L+S         RP    +   + 
Sbjct: 211 KPYKKMKGPEVMAFIEQGK---RMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMR 267

Query: 299 HPWV 302
             + 
Sbjct: 268 ACYY 271

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score =  181 bits (460), Expect = 5e-54
 Identities = 68/319 (21%), Positives = 123/319 (38%), Gaps = 64/319 (20%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
           ++Y   + +G G + VV +            A+K +R                       
Sbjct: 2   EKYHGLEKIGEGTYGVVYKAQNNY---GETFALKKIRL---------------------- 36

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
                K+     +    EI +++++      H N++ LYDV   +  + L+ E       
Sbjct: 37  ----EKEDEGIPSTTIREISILKEL-----KHSNIVKLYDVIHTKKRLVLVFEHLDQDLK 87

Query: 130 FDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDF 189
               V +     V A + + Q+  G+A  H   ++HRDLKP+N L      +  LKI DF
Sbjct: 88  KLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLI---NREGELKIADF 144

Query: 190 GLSSVEGYTD-PVVGLFGSIDYVSPEALLQD-RITSKSDMWSLGVILYILLSGYPPFIAQ 247
           GL+   G           ++ Y +P+ L+   + ++  D+WS+G I   +++G P F   
Sbjct: 145 GLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGV 204

Query: 248 SNRQKQQMIMAGEFSFYEQTW-------------------------KNISSSAKQLISSL 282
           S   +   I     +   + W                         K +  S   L+S +
Sbjct: 205 SEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKM 264

Query: 283 LTVDPNRRPSAQELLNHPW 301
           L +DPN+R +A++ L H +
Sbjct: 265 LKLDPNQRITAKQALEHAY 283

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  179 bits (454), Expect = 8e-53
 Identities = 73/325 (22%), Positives = 124/325 (38%), Gaps = 63/325 (19%)

Query: 7   KLTDEYEVTDILGRGGFSVVRRGI-KKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSS 65
           +   +YE    +G G +  V +    K  G    VA+K +R                   
Sbjct: 4   RADQQYECVAEIGEGAYGKVFKARDLKNGGRF--VALKRVRV------------------ 43

Query: 66  SQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVY-----EDQNGVHLI 120
                  T ++      +   E+ V+R +      HPNV+ L+DV      + +  + L+
Sbjct: 44  ------QTGEEGMPLSTI--REVAVLRHL--ETFEHPNVVRLFDVCTVSRTDRETKLTLV 93

Query: 121 LELCSGGEL-FDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDR 179
            E        +   V +          ++ Q+  GL  LH   +VHRDLKP+N L  +  
Sbjct: 94  FEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSG 153

Query: 180 EDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS 239
           +    K+ DFGL+ +  +   +  +  ++ Y +PE LLQ    +  D+WS+G I   +  
Sbjct: 154 QI---KLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR 210

Query: 240 GYPPFIAQSNRQKQQMIMAGEFSFYEQTW-----------------------KNISSSAK 276
             P F   S+  +   I+       E+ W                        +I    K
Sbjct: 211 RKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGK 270

Query: 277 QLISSLLTVDPNRRPSAQELLNHPW 301
            L+   LT +P +R SA   L+HP+
Sbjct: 271 DLLLKCLTFNPAKRISAYSALSHPY 295

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  176 bits (448), Expect = 2e-52
 Identities = 65/294 (22%), Positives = 114/294 (38%), Gaps = 47/294 (15%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
            +      LG G F VV+ G  +       VAIK ++                       
Sbjct: 4   KDLTFLKELGTGQFGVVKYGKWRG---QYDVAIKMIKE---------------------- 38

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
                   S+S+     E  VM  +      H  ++ LY V   Q  + +I E  + G L
Sbjct: 39  -------GSMSEDEFIEEAKVMMNLS-----HEKLVQLYGVCTKQRPIFIITEYMANGCL 86

Query: 130 FDRIVAQE-RYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMD 188
            + +     R+       + + + E +  L     +HRDL   NCL     +   +K+ D
Sbjct: 87  LNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV---NDQGVVKVSD 143

Query: 189 FGLS--SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFI 245
           FGLS   ++      VG    + +  PE L+  + +SKSD+W+ GV+++ + S G  P+ 
Sbjct: 144 FGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 203

Query: 246 AQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH 299
             +N +  + I  G   +        S     ++ S      + RP+ + LL++
Sbjct: 204 RFTNSETAEHIAQGLRLYRP---HLASEKVYTIMYSCWHEKADERPTFKILLSN 254

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  178 bits (451), Expect = 3e-52
 Identities = 62/334 (18%), Positives = 115/334 (34%), Gaps = 78/334 (23%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
            +YE    +G+G F  V +   +  G+  +VA+K +                        
Sbjct: 10  SKYEKLAKIGQGTFGEVFKARHRKTGQ--KVALKKVLM---------------------- 45

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQ--------NGVHLIL 121
                 +          EI +++ +      H NV++L ++   +          ++L+ 
Sbjct: 46  ----ENEKEGFPITALREIKILQLL-----KHENVVNLIEICRTKASPYNRCKGSIYLVF 96

Query: 122 ELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDRED 181
           + C             ++       V++ +  GL  +H+  I+HRD+K  N L      D
Sbjct: 97  DFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT---RD 153

Query: 182 SPLKIMDFGLSSV-----EGYTDPVVGLFGSIDYVSPEALLQDR-ITSKSDMWSLGVILY 235
             LK+ DFGL+           +       ++ Y  PE LL +R      D+W  G I+ 
Sbjct: 154 GVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMA 213

Query: 236 ILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNI------------------------ 271
            + +  P     + + +  +I     S   + W N+                        
Sbjct: 214 EMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLK 273

Query: 272 ----SSSAKQLISSLLTVDPNRRPSAQELLNHPW 301
                  A  LI  LL +DP +R  + + LNH +
Sbjct: 274 AYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDF 307

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  176 bits (446), Expect = 4e-52
 Identities = 74/294 (25%), Positives = 119/294 (40%), Gaps = 47/294 (15%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
            E      +G G F +V  G        ++VAIKT+R                       
Sbjct: 5   SELTFVQEIGSGQFGLVHLGYWLN---KDKVAIKTIRE---------------------- 39

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
                   ++S+     E  VM K+      HP ++ LY V  +Q  + L+ E    G L
Sbjct: 40  -------GAMSEEDFIEEAEVMMKLS-----HPKLVQLYGVCLEQAPICLVFEFMEHGCL 87

Query: 130 FDRIVAQERYMEVGAAA-VIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMD 188
            D +  Q           +   + EG+A L +A ++HRDL   NCL     E+  +K+ D
Sbjct: 88  SDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV---GENQVIKVSD 144

Query: 189 FGLSSV--EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFI 245
           FG++    +       G    + + SPE     R +SKSD+WS GV+++ + S G  P+ 
Sbjct: 145 FGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE 204

Query: 246 AQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH 299
            +SN +  + I  G   F     +  S+   Q+++      P  RP+   LL  
Sbjct: 205 NRSNSEVVEDISTG---FRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQ 255

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  175 bits (445), Expect = 5e-52
 Identities = 62/294 (21%), Positives = 114/294 (38%), Gaps = 51/294 (17%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
            E ++   +G+G F  V  G  +     N+VA+K ++                       
Sbjct: 7   KELKLLQTIGKGEFGDVMLGDYRG----NKVAVKCIK----------------------- 39

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDV-YEDQNGVHLILELCSGGE 128
                   +    L   E  VM ++      H N++ L  V  E++ G++++ E  + G 
Sbjct: 40  -----NDATAQAFL--AEASVMTQLR-----HSNLVQLLGVIVEEKGGLYIVTEYMAKGS 87

Query: 129 LFDRIVAQERYM--EVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKI 186
           L D + ++ R +            + E +  L   N VHRDL   N L   D      K+
Sbjct: 88  LVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNV---AKV 144

Query: 187 MDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFI 245
            DFGL+     T         + + +PEAL + + ++KSD+WS G++L+ + S G  P+ 
Sbjct: 145 SDFGLTKEASSTQDTG--KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYP 202

Query: 246 AQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH 299
               +     +  G   +          +  +++ +   +D   RPS  +L   
Sbjct: 203 RIPLKDVVPRVEKG---YKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQ 253

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  175 bits (445), Expect = 7e-52
 Identities = 64/292 (21%), Positives = 113/292 (38%), Gaps = 46/292 (15%)

Query: 18  LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQV 77
           LG G F  V++G  +       VA+K L+                               
Sbjct: 15  LGSGNFGTVKKGYYQMKKVVKTVAVKILKN-------------------------EANDP 49

Query: 78  SVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE 137
           ++ D LL  E  VM+++      +P ++ +  + E ++   L++E+   G L   +    
Sbjct: 50  ALKDELL-AEANVMQQLD-----NPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQNR 102

Query: 138 RYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS----S 193
              +     ++ Q++ G+  L ++N VHRDL   N L +        KI DFGLS    +
Sbjct: 103 HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYA---KISDFGLSKALRA 159

Query: 194 VEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNRQK 252
            E Y          + + +PE +   + +SKSD+WS GV+++   S G  P+      + 
Sbjct: 160 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 219

Query: 253 QQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL---LNHPW 301
             M+  GE                 L++   T D   RP    +   L + +
Sbjct: 220 TAMLEKGE---RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 268

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  174 bits (442), Expect = 2e-51
 Identities = 69/294 (23%), Positives = 115/294 (39%), Gaps = 49/294 (16%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
           +  ++ + LG G F  V  G         +VA+K+L                        
Sbjct: 13  ETLKLVERLGAGQFGEVWMGYYNG---HTKVAVKSL------------------------ 45

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
                KQ S+S      E  +M+++      H  ++ LY V      +++I E    G L
Sbjct: 46  -----KQGSMSPDAFLAEANLMKQLQ-----HQRLVRLYAVVTQ-EPIYIITEYMENGSL 94

Query: 130 FDRIVAQE--RYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIM 187
            D +      +        +  QIAEG+A + + N +HRDL+  N L  +       KI 
Sbjct: 95  VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSC---KIA 151

Query: 188 DFGLSSV--EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPF 244
           DFGL+ +  +       G    I + +PEA+     T KSD+WS G++L  +++ G  P+
Sbjct: 152 DFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 211

Query: 245 IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN 298
              +N +  Q +  G   +      N      QL+       P  RP+   L +
Sbjct: 212 PGMTNPEVIQNLERG---YRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRS 262

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  176 bits (447), Expect = 3e-51
 Identities = 75/321 (23%), Positives = 136/321 (42%), Gaps = 49/321 (15%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
           D+++    LG G F  V     K  G     A+K L +            +      QI 
Sbjct: 41  DQFDRIKTLGTGSFGRVMLVKHKESGN--HYAMKILDK------------QKVVKLKQIE 86

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
                           NE  +++ +       P ++ L   ++D + +++++E  +GGE+
Sbjct: 87  HT-------------LNEKRILQAV-----NFPFLVKLEFSFKDNSNLYMVMEYVAGGEM 128

Query: 130 FDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDF 189
           F  +    R+ E  A     QI      LH  ++++RDLKPEN L     +   +++ DF
Sbjct: 129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDF 185

Query: 190 GLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSN 249
           G +           L G+ + ++PE +L        D W+LGV++Y + +GYPPF A   
Sbjct: 186 GFAKR--VKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243

Query: 250 RQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRR-----PSAQELLNHPWVIG 304
            Q  + I++G+  F      + SS  K L+ +LL VD  +R         ++ NH W   
Sbjct: 244 IQIYEKIVSGKVRF----PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFAT 299

Query: 305 ---DSAKEEEMDAEIVSRLQS 322
               +  + +++A  + + + 
Sbjct: 300 TDWIAIYQRKVEAPFIPKFKG 320

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score =  174 bits (442), Expect = 7e-51
 Identities = 65/329 (19%), Positives = 113/329 (34%), Gaps = 79/329 (24%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
           D+Y++   LGRG +S V   I  T  E  +V +K L+ +                     
Sbjct: 35  DDYQLVRKLGRGKYSEVFEAINITNNE--KVVVKILKPV--------------------- 71

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNG--VHLILELCSGG 127
                         +  EI ++  +       PN+I L D+ +D       L+ E  +  
Sbjct: 72  ----------KKKKIKREIKILENL----RGGPNIITLADIVKDPVSRTPALVFEHVNNT 117

Query: 128 ELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIM 187
           +        +   +      + +I + L   H   I+HRD+KP N +   D E   L+++
Sbjct: 118 DFKQLY---QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLI 172

Query: 188 DFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDR-ITSKSDMWSLGVILYILLSGYPPFIA 246
           D+GL+              S  +  PE L+  +      DMWSLG +L  ++    PF  
Sbjct: 173 DWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 232

Query: 247 QSNRQKQQMIMAGEFS----------------------------------FYEQTWKNIS 272
             +   Q + +A                                       + +    +S
Sbjct: 233 GHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVS 292

Query: 273 SSAKQLISSLLTVDPNRRPSAQELLNHPW 301
             A   +  LL  D   R +A+E + HP+
Sbjct: 293 PEALDFLDKLLRYDHQSRLTAREAMEHPY 321

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  173 bits (439), Expect = 1e-50
 Identities = 52/331 (15%), Positives = 104/331 (31%), Gaps = 51/331 (15%)

Query: 7   KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSS 66
           ++ + Y +   +G G F  +  G     GE  +VAIK                       
Sbjct: 4   RVGNRYRLGRKIGSGSFGDIYLGTDIAAGE--EVAIKLEC-------------------- 41

Query: 67  QIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSG 126
                     V      L  E  + + +         +  +     + +   +++EL   
Sbjct: 42  ----------VKTKHPQLHIESKIYKMM----QGGVGIPTIRWCGAEGDYNVMVMELLGP 87

Query: 127 GELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKI 186
                      ++       +  Q+   +  +H  N +HRD+KP+N L    ++ + + I
Sbjct: 88  SLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYI 147

Query: 187 MDFGLS--------SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILL 238
           +DFGL+                   L G+  Y S    L    + + D+ SLG +L    
Sbjct: 148 IDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFN 207

Query: 239 SGYPPFIAQSNRQKQQMIMAGEFSFY----EQTWKNISSSAKQLISSLLTVDPNRRPSAQ 294
            G  P+       K+Q              E   K   S     ++   ++  + +P   
Sbjct: 208 LGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYS 267

Query: 295 ---ELLNHPWVIGDSAKEEEMDAEIVSRLQS 322
              +L  + +     + +   D  ++    S
Sbjct: 268 YLRQLFRNLFHRQGFSYDYVFDWNMLKFGAS 298

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  174 bits (442), Expect = 1e-50
 Identities = 72/330 (21%), Positives = 119/330 (36%), Gaps = 72/330 (21%)

Query: 8   LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQ 67
           +   Y     +G G + +V            +VAIK +                      
Sbjct: 6   VGPRYTNLSYIGEGAYGMVCSAYDNVNKV--RVAIKKIS--------------------- 42

Query: 68  IGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYED---QNGVHLILELC 124
               P   Q      L   EI ++ +       H N+I + D+      +    + L   
Sbjct: 43  ----PFEHQTYCQRTL--REIKILLRFR-----HENIIGINDIIRAPTIEQMKDVYLVTH 91

Query: 125 SGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPL 184
             G    +++  +          + QI  GL  +H AN++HRDLKP N L         L
Sbjct: 92  LMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDL 148

Query: 185 KIMDFGLSSV----EGYTDPVVGLFGSIDYVSPEALLQDRITSKS-DMWSLGVILYILLS 239
           KI DFGL+ V      +T  +     +  Y +PE +L  +  +KS D+WS+G IL  +LS
Sbjct: 149 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 208

Query: 240 GYPPFIAQSNRQKQQMIMAGEFSFYEQTW---------------------------KNIS 272
             P F  +    +   I+    S  ++                              N  
Sbjct: 209 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNAD 268

Query: 273 SSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
           S A  L+  +LT +P++R   ++ L HP++
Sbjct: 269 SKALDLLDKMLTFNPHKRIEVEQALAHPYL 298

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  174 bits (443), Expect = 1e-50
 Identities = 71/331 (21%), Positives = 111/331 (33%), Gaps = 76/331 (22%)

Query: 6   RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSS 65
           R     Y  T ++G G F VV +      GE   VAIK + +                  
Sbjct: 16  RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGE--LVAIKKVLQ------------------ 55

Query: 66  SQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVY------EDQNGVHL 119
                                E+ +MRK+      H N++ L   +      +D+  ++L
Sbjct: 56  --------------DKRFKNRELQIMRKLD-----HCNIVRLRYFFYSSGEKKDEVYLNL 96

Query: 120 ILELCSGG---ELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFL 176
           +L+               A++    +     + Q+   LA +H   I HRD+KP+N L  
Sbjct: 97  VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL- 155

Query: 177 NDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSP-EALLQDRITSKSDMWSLGVILY 235
            D + + LK+ DFG +      +P V    S  Y +P         TS  D+WS G +L 
Sbjct: 156 -DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLA 214

Query: 236 ILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWK-------------------------N 270
            LL G P F   S   +   I+    +   +  +                          
Sbjct: 215 ELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPR 274

Query: 271 ISSSAKQLISSLLTVDPNRRPSAQELLNHPW 301
               A  L S LL   P  R +  E   H +
Sbjct: 275 TPPEAIALCSRLLEYTPTARLTPLEACAHSF 305

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  173 bits (440), Expect = 1e-50
 Identities = 64/320 (20%), Positives = 113/320 (35%), Gaps = 66/320 (20%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETN---QVAIKTLRRIGSTTPYGFPGSRGSSSSS 66
           +  E   +LG G F  V         +T    QVA+K L+               + SS 
Sbjct: 37  ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKE-------------KADSSE 83

Query: 67  QIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSG 126
           +                  +E+ +M ++      H N+++L         ++LI E C  
Sbjct: 84  REALM--------------SELKMMTQLGS----HENIVNLLGACTLSGPIYLIFEYCCY 125

Query: 127 GELFDRIVAQERYM-----------------------EVGAAAVIRQIAEGLAALHQANI 163
           G+L + + ++                                    Q+A+G+  L   + 
Sbjct: 126 GDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSC 185

Query: 164 VHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVV---GLFGSIDYVSPEALLQDR 220
           VHRDL   N L  + +    +KI DFGL+         V        + +++PE+L +  
Sbjct: 186 VHRDLAARNVLVTHGKV---VKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGI 242

Query: 221 ITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLI 279
            T KSD+WS G++L+ + S G  P+           ++   F          +     ++
Sbjct: 243 YTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKM--DQPFYATEEIYIIM 300

Query: 280 SSLLTVDPNRRPSAQELLNH 299
            S    D  +RPS   L + 
Sbjct: 301 QSCWAFDSRKRPSFPNLTSF 320

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  172 bits (436), Expect = 3e-50
 Identities = 66/307 (21%), Positives = 110/307 (35%), Gaps = 54/307 (17%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
           ++ +  D++G G F  V +   K  G     AIK ++   S                   
Sbjct: 10  NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKD----------------- 52

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
                            E+ V+ K+      HPN+I+L    E +  ++L +E    G L
Sbjct: 53  ----------DHRDFAGELEVLCKL----GHHPNIINLLGACEHRGYLYLAIEYAPHGNL 98

Query: 130 FDRIVAQERYMEVGAAA----------------VIRQIAEGLAALHQANIVHRDLKPENC 173
            D +          A A                    +A G+  L Q   +HRDL   N 
Sbjct: 99  LDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNI 158

Query: 174 LFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVI 233
           L     E+   KI DFGLS  +            + +++ E+L     T+ SD+WS GV+
Sbjct: 159 LV---GENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVL 215

Query: 234 LYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPS 292
           L+ ++S G  P+   +  +  + +  G   +  +   N       L+       P  RPS
Sbjct: 216 LWEIVSLGGTPYCGMTCAELYEKLPQG---YRLEKPLNCDDEVYDLMRQCWREKPYERPS 272

Query: 293 AQELLNH 299
             ++L  
Sbjct: 273 FAQILVS 279

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  170 bits (432), Expect = 7e-50
 Identities = 73/299 (24%), Positives = 116/299 (38%), Gaps = 51/299 (17%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
           +   +   LG+G F  V  G       T +VAIKTL+                       
Sbjct: 17  ESLRLEVKLGQGCFGEVWMGTWN---GTTRVAIKTLKP---------------------- 51

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
                   ++S      E  VM+K+      H  ++ LY V   +  ++++ E  S G L
Sbjct: 52  -------GTMSPEAFLQEAQVMKKL-----RHEKLVQLYAVVS-EEPIYIVTEYMSKGSL 98

Query: 130 FDRIVAQER--YMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIM 187
            D +  +            +  QIA G+A + + N VHRDL+  N L     E+   K+ 
Sbjct: 99  LDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVA 155

Query: 188 DFGLSSV--EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPF 244
           DFGL+ +  +       G    I + +PEA L  R T KSD+WS G++L  L + G  P+
Sbjct: 156 DFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 215

Query: 245 IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN--HPW 301
               NR+    +  G   +          S   L+      +P  RP+ + L      +
Sbjct: 216 PGMVNREVLDQVERG---YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 271

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  170 bits (432), Expect = 8e-50
 Identities = 68/320 (21%), Positives = 121/320 (37%), Gaps = 64/320 (20%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
            +YE  + +G G +  V +   +   E   VA+K +R                       
Sbjct: 2   QKYEKLEKIGEGTYGTVFKAKNRETHE--IVALKRVRL---------------------- 37

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
                 +   S AL   EI +++++      H N++ L+DV      + L+ E C     
Sbjct: 38  --DDDDEGVPSSAL--REICLLKEL-----KHKNIVRLHDVLHSDKKLTLVFEFCDQDLK 88

Query: 130 FDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDF 189
                           + + Q+ +GL   H  N++HRDLKP+N L      +  LK+ +F
Sbjct: 89  KYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLI---NRNGELKLANF 145

Query: 190 GLSSVEGYTDPVVGLFG-SIDYVSPEALLQDRI-TSKSDMWSLGVILYILLSG-YPPFIA 246
           GL+   G           ++ Y  P+ L   ++ ++  DMWS G I   L +   P F  
Sbjct: 146 GLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPG 205

Query: 247 QSNRQKQQMIMAGEFSFYEQTW-------------------------KNISSSAKQLISS 281
                + + I     +  E+ W                           ++++ + L+ +
Sbjct: 206 NDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQN 265

Query: 282 LLTVDPNRRPSAQELLNHPW 301
           LL  +P +R SA+E L HP+
Sbjct: 266 LLKCNPVQRISAEEALQHPY 285

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  170 bits (432), Expect = 9e-50
 Identities = 71/320 (22%), Positives = 124/320 (38%), Gaps = 64/320 (20%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
           + ++  + +G G + VV +   K  GE   VA+K +R                       
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGE--VVALKKIRL---------------------- 37

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCS-GGE 128
                 +     +    EI +++++      HPN++ L DV   +N ++L+ E      +
Sbjct: 38  ----DTETEGVPSTAIREISLLKEL-----NHPNIVKLLDVIHTENKLYLVFEFLHQDLK 88

Query: 129 LFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMD 188
            F    A          + + Q+ +GLA  H   ++HRDLKP+N L      +  +K+ D
Sbjct: 89  KFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLAD 145

Query: 189 FGLSSVEGYTDPVVGLF-GSIDYVSPEALLQDR-ITSKSDMWSLGVILYILLSGYPPFIA 246
           FGL+   G           ++ Y +PE LL  +  ++  D+WSLG I   +++    F  
Sbjct: 146 FGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG 205

Query: 247 QSNRQKQQMIMAGEFSFYEQTWK-------------------------NISSSAKQLISS 281
            S   +   I     +  E  W                           +    + L+S 
Sbjct: 206 DSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQ 265

Query: 282 LLTVDPNRRPSAQELLNHPW 301
           +L  DPN+R SA+  L HP+
Sbjct: 266 MLHYDPNKRISAKAALAHPF 285

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  171 bits (434), Expect = 2e-49
 Identities = 77/347 (22%), Positives = 130/347 (37%), Gaps = 70/347 (20%)

Query: 1   MGQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSR 60
           + +   ++   Y     +G G +  V   +    G   +VAIK L R             
Sbjct: 9   VTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGA--KVAIKKLYR------------- 53

Query: 61  GSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQN----G 116
                      P + ++    A    E+ +++ +      H NVI L DV+         
Sbjct: 54  -----------PFQSELFAKRAY--RELRLLKHM-----RHENVIGLLDVFTPDETLDDF 95

Query: 117 VHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFL 176
               L +   G    +++  E+  E     ++ Q+ +GL  +H A I+HRDLKP N    
Sbjct: 96  TDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAV- 154

Query: 177 NDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQD-RITSKSDMWSLGVILY 235
              ED  LKI+DFGL+        + G   +  Y +PE +L   R T   D+WS+G I+ 
Sbjct: 155 --NEDCELKILDFGLARQAD--SEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMA 210

Query: 236 ILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTW--------------------------- 268
            +++G   F    +  + + IM    +   +                             
Sbjct: 211 EMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASIL 270

Query: 269 KNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAKEEEMDAE 315
            N S  A  L+  +L +D  +R +A E L HP+       E+E   +
Sbjct: 271 TNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDTEDEPQVQ 317

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  171 bits (433), Expect = 2e-49
 Identities = 71/327 (21%), Positives = 121/327 (37%), Gaps = 70/327 (21%)

Query: 7   KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSS 66
           ++ + Y+    +G G +  V        G   +VA+K L R                   
Sbjct: 15  EVPERYQNLSPVGSGAYGSVCAAFDTKTGL--RVAVKKLSR------------------- 53

Query: 67  QIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYED----QNGVHLILE 122
                    Q  +       E+ +++ +      H NVI L DV+      +    + L 
Sbjct: 54  -------PFQSIIHAKRTYRELRLLKHM-----KHENVIGLLDVFTPARSLEEFNDVYLV 101

Query: 123 LCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDS 182
               G   + IV  ++  +     +I QI  GL  +H A+I+HRDLKP N       ED 
Sbjct: 102 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV---NEDC 158

Query: 183 PLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDR-ITSKSDMWSLGVILYILLSGY 241
            LKI+DFGL+          G   +  Y +PE +L         D+WS+G I+  LL+G 
Sbjct: 159 ELKILDFGLARHTDDEMT--GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216

Query: 242 PPFIAQSNRQKQQMIMAGEFSFYEQTWK---------------------------NISSS 274
             F    +  + ++I+    +   +  K                             +  
Sbjct: 217 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 276

Query: 275 AKQLISSLLTVDPNRRPSAQELLNHPW 301
           A  L+  +L +D ++R +A + L H +
Sbjct: 277 AVDLLEKMLVLDSDKRITAAQALAHAY 303

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  168 bits (425), Expect = 1e-48
 Identities = 73/299 (24%), Positives = 117/299 (39%), Gaps = 47/299 (15%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQ-VAIKTLRRIGSTTPYGFPGSRGSSSSSQI 68
              ++  ++G G F  V  G  K  G+    VAIKTL+              G +   + 
Sbjct: 26  SCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKS-------------GYTEKQRR 72

Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
            F               +E  +M +       HPNVI L  V      V +I E    G 
Sbjct: 73  DFL--------------SEASIMGQFD-----HPNVIHLEGVVTKSTPVMIITEFMENGS 113

Query: 129 LFDRIVAQERYM-EVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIM 187
           L   +   +     +    ++R IA G+  L   N VHRDL   N L  ++      K+ 
Sbjct: 114 LDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLV---CKVS 170

Query: 188 DFGLSSV------EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-G 240
           DFGLS        +      +G    I + +PEA+   + TS SD+WS G++++ ++S G
Sbjct: 171 DFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYG 230

Query: 241 YPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH 299
             P+   +N+     I      +      +  S+  QL+      D N RP   +++N 
Sbjct: 231 ERPYWDMTNQDVINAIEQD---YRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNT 286

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  166 bits (421), Expect = 2e-48
 Identities = 68/297 (22%), Positives = 106/297 (35%), Gaps = 43/297 (14%)

Query: 10  DEYEVTDILGRGGFSVVRRGI-KKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQI 68
            +  + + LG G F VVRRG      G+T  VA+K L+                S    +
Sbjct: 8   KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKP------------DVLSQPEAM 55

Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
             F               E+  M  +      H N+I LY V      + ++ EL   G 
Sbjct: 56  DDF-------------IREVNAMHSL-----DHRNLIRLYGVVLTPP-MKMVTELAPLGS 96

Query: 129 LFDRIVAQERYMEVG-AAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIM 187
           L DR+   + +  +G  +    Q+AEG+  L     +HRDL   N L         +KI 
Sbjct: 97  LLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDL---VKIG 153

Query: 188 DFGLSSVEGYTDPVVGLF----GSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYP 242
           DFGL       D    +         + +PE+L     +  SD W  GV L+ + + G  
Sbjct: 154 DFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQE 213

Query: 243 PFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH 299
           P+I  +  Q    I            ++       ++       P  RP+   L + 
Sbjct: 214 PWIGLNGSQILHKIDKEGERL--PRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDF 268

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  165 bits (419), Expect = 4e-48
 Identities = 75/295 (25%), Positives = 117/295 (39%), Gaps = 44/295 (14%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQ-VAIKTLRRIGSTTPYGFPGSRGSSSSSQI 68
           +  E+   +G G F  V +GI  +       VAIKT +   S                  
Sbjct: 7   ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTS------------------ 48

Query: 69  GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGE 128
                             E L MR+       HP+++ L  V  + N V +I+ELC+ GE
Sbjct: 49  ---------DSVREKFLQEALTMRQF-----DHPHIVKLIGVITE-NPVWIIMELCTLGE 93

Query: 129 LFDRIVAQERYMEVGAAAVI-RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIM 187
           L   +  ++  +++ +  +   Q++  LA L     VHRD+   N L      +  +K+ 
Sbjct: 94  LRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV---SSNDCVKLG 150

Query: 188 DFGLSSVEGYTDPVVGLF--GSIDYVSPEALLQDRITSKSDMWSLGVILY-ILLSGYPPF 244
           DFGLS     +           I +++PE++   R TS SD+W  GV ++ IL+ G  PF
Sbjct: 151 DFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 210

Query: 245 IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH 299
               N      I  GE         N   +   L++     DP+RRP   EL   
Sbjct: 211 QGVKNNDVIGRIENGE---RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ 262

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  166 bits (421), Expect = 8e-48
 Identities = 69/297 (23%), Positives = 115/297 (38%), Gaps = 46/297 (15%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQ--VAIKTLRRIGSTTPYGFPGSRGSSSSSQ 67
            E++   +LG G F  V +G+    GE  +  VAIK LR   S                 
Sbjct: 9   TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--------------- 53

Query: 68  IGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGG 127
                       ++  + +E  VM  +      +P+V  L  +      V LI +L   G
Sbjct: 54  ------------ANKEILDEAYVMASVD-----NPHVCRLLGICLTST-VQLITQLMPFG 95

Query: 128 ELFDRIVAQERYM-EVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKI 186
            L D +   +  +          QIA+G+  L    +VHRDL   N L    +    +KI
Sbjct: 96  CLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH---VKI 152

Query: 187 MDFGLS---SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYP 242
            DFGL+     E       G    I +++ E++L    T +SD+WS GV ++ L++ G  
Sbjct: 153 TDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK 212

Query: 243 PFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH 299
           P+      +   ++  GE           +     ++     +D + RP  +EL+  
Sbjct: 213 PYDGIPASEISSILEKGE---RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE 266

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  163 bits (413), Expect = 2e-46
 Identities = 73/346 (21%), Positives = 127/346 (36%), Gaps = 83/346 (23%)

Query: 1   MGQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSR 60
           +G  T  +   Y+    +G G   +V             VAIK L R             
Sbjct: 8   VGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDR--NVAIKKLSR------------- 52

Query: 61  GSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVY------EDQ 114
                      P + Q     A    E+++M+ +      H N+I L +V+      E+ 
Sbjct: 53  -----------PFQNQTHAKRAY--RELVLMKCV-----NHKNIISLLNVFTPQKTLEEF 94

Query: 115 NGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCL 174
             V+L++EL            Q        + ++ Q+  G+  LH A I+HRDLKP N +
Sbjct: 95  QDVYLVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 151

Query: 175 FLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVIL 234
               + D  LKI+DFGL+   G +  +     +  Y +PE +L        D+WS+G I+
Sbjct: 152 V---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM 208

Query: 235 YILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNI----------------------- 271
             ++     F  +    +   ++    +   +  K +                       
Sbjct: 209 GEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLF 268

Query: 272 ---------------SSSAKQLISSLLTVDPNRRPSAQELLNHPWV 302
                          +S A+ L+S +L +DP +R S  + L HP++
Sbjct: 269 PDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 314

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  161 bits (407), Expect = 4e-46
 Identities = 68/312 (21%), Positives = 128/312 (41%), Gaps = 46/312 (14%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
            +  +   LG G +  V  G+ K    T  VA+KTL+                  + ++ 
Sbjct: 17  TDITMKHKLGGGQYGEVYEGVWKKYSLT--VAVKTLKE----------------DTMEVE 58

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL 129
            F               E  VM++I      HPN++ L  V   +   ++I E  + G L
Sbjct: 59  EF-------------LKEAAVMKEIK-----HPNLVQLLGVCTREPPFYIITEFMTYGNL 100

Query: 130 FDRIVAQERYM--EVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIM 187
            D +    R     V    +  QI+  +  L + N +HRDL   NCL     E+  +K+ 
Sbjct: 101 LDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENHLVKVA 157

Query: 188 DFGLSSV--EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFI 245
           DFGLS +          G    I + +PE+L  ++ + KSD+W+ GV+L+ + +      
Sbjct: 158 DFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 217

Query: 246 AQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH-PWVIG 304
              +  +   ++  ++    +  +       +L+ +    +P+ RPS  E+      +  
Sbjct: 218 PGIDLSQVYELLEKDYRM--ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 275

Query: 305 DSAKEEEMDAEI 316
           +S+  +E++ E+
Sbjct: 276 ESSISDEVEKEL 287

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  158 bits (400), Expect = 4e-45
 Identities = 55/312 (17%), Positives = 107/312 (34%), Gaps = 56/312 (17%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETN-----QVAIKTLRRIGSTTPYGFPGSRGSSS 64
           D   +   LG G F  V         +       +VA+K L+                ++
Sbjct: 13  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKS--------------DAT 58

Query: 65  SSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELC 124
              +                 +E+ +M+ I +    H N+I+L         +++I+E  
Sbjct: 59  EKDLSDL-------------ISEMEMMKMIGK----HKNIINLLGACTQDGPLYVIVEYA 101

Query: 125 SGGELFDRI----------------VAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDL 168
           S G L + +                  +E+       +   Q+A G+  L     +HRDL
Sbjct: 102 SKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDL 161

Query: 169 KPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMW 228
              N L   D                  Y          + +++PEAL     T +SD+W
Sbjct: 162 AARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVW 221

Query: 229 SLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDP 287
           S GV+L+ + + G  P+      +  +++  G          N ++    ++       P
Sbjct: 222 SFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH---RMDKPSNCTNELYMMMRDCWHAVP 278

Query: 288 NRRPSAQELLNH 299
           ++RP+ ++L+  
Sbjct: 279 SQRPTFKQLVED 290

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  153 bits (388), Expect = 2e-43
 Identities = 73/297 (24%), Positives = 120/297 (40%), Gaps = 46/297 (15%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQ--VAIKTLRRIGSTTPYGFPGSRGSSSSSQ 67
                  ++G G F  V +G+ KT     +  VAIKTL+              G +   +
Sbjct: 7   SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKA-------------GYTEKQR 53

Query: 68  IGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGG 127
           + F                E  +M +       H N+I L  V      + +I E    G
Sbjct: 54  VDFL--------------GEAGIMGQFS-----HHNIIRLEGVISKYKPMMIITEYMENG 94

Query: 128 ELFDRIVAQERYM-EVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKI 186
            L   +  ++     +    ++R IA G+  L   N VHRDL   N L  ++      K+
Sbjct: 95  ALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLV---CKV 151

Query: 187 MDFGLSSV----EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GY 241
            DFGLS V       T    G    I + +PEA+   + TS SD+WS G++++ +++ G 
Sbjct: 152 SDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGE 211

Query: 242 PPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN 298
            P+   SN +  + I  G   F   T  +  S+  QL+      +  RRP   ++++
Sbjct: 212 RPYWELSNHEVMKAINDG---FRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVS 265

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  154 bits (389), Expect = 2e-43
 Identities = 64/319 (20%), Positives = 109/319 (34%), Gaps = 69/319 (21%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETN---QVAIKTLRRIGSTTPYGFPGSRGSSSSS 66
           +  E    +G G F  V +              VA+K L+   S                
Sbjct: 13  NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASAD-------------- 58

Query: 67  QIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSG 126
                          A    E  +M +       +PN++ L  V      + L+ E  + 
Sbjct: 59  -------------MQADFQREAALMAEF-----DNPNIVKLLGVCAVGKPMCLLFEYMAY 100

Query: 127 GELFDRIVAQERYMEVG------------------------AAAVIRQIAEGLAALHQAN 162
           G+L + + +   +                               + RQ+A G+A L +  
Sbjct: 101 GDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK 160

Query: 163 IVHRDLKPENCLFLNDREDSPLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQD 219
            VHRDL   NCL   +     +KI DFGLS       Y          I ++ PE++  +
Sbjct: 161 FVHRDLATRNCLVGENMV---VKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYN 217

Query: 220 RITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQL 278
           R T++SD+W+ GV+L+ + S G  P+   ++ +    +  G         +N       L
Sbjct: 218 RYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGN---ILACPENCPLELYNL 274

Query: 279 ISSLLTVDPNRRPSAQELL 297
           +    +  P  RPS   + 
Sbjct: 275 MRLCWSKLPADRPSFCSIH 293

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  153 bits (387), Expect = 4e-43
 Identities = 57/313 (18%), Positives = 112/313 (35%), Gaps = 61/313 (19%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETN---QVAIKTLRRIGSTTPYGFPGSRGSSSSS 66
           +       LG G F  V         +++    VA+K L+               +  + 
Sbjct: 23  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKP-------------SAHLTE 69

Query: 67  QIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSG 126
           +                  +E+ V+  +      H N+++L           +I E C  
Sbjct: 70  REALM--------------SELKVLSYL----GNHMNIVNLLGACTIGGPTLVITEYCCY 111

Query: 127 GELFDRI------------------VAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDL 168
           G+L + +                    +         +   Q+A+G+A L   N +HRDL
Sbjct: 112 GDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDL 171

Query: 169 KPENCLFLNDREDSPLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKS 225
              N L  + R     KI DFGL+     +            + +++PE++     T +S
Sbjct: 172 AARNILLTHGRIT---KICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFES 228

Query: 226 DMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLT 284
           D+WS G+ L+ L S G  P+       K   ++   F     + ++  +    ++ +   
Sbjct: 229 DVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRM--LSPEHAPAEMYDIMKTCWD 286

Query: 285 VDPNRRPSAQELL 297
            DP +RP+ ++++
Sbjct: 287 ADPLKRPTFKQIV 299

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  153 bits (386), Expect = 5e-43
 Identities = 72/307 (23%), Positives = 122/307 (39%), Gaps = 55/307 (17%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGET---NQVAIKTLRRIGSTTPYGFPGSRGSSSSS 66
           ++  ++  LG+G F +V  G+ K   +     +VAIKT+                +S   
Sbjct: 20  EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNE-------------AASMRE 66

Query: 67  QIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSG 126
           +I F               NE  VM++         +V+ L  V        +I+EL + 
Sbjct: 67  RIEFL--------------NEASVMKEF-----NCHHVVRLLGVVSQGQPTLVIMELMTR 107

Query: 127 GELFDRIVAQERYMEVG----------AAAVIRQIAEGLAALHQANIVHRDLKPENCLFL 176
           G+L   + +    M                +  +IA+G+A L+    VHRDL   NC+  
Sbjct: 108 GDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA 167

Query: 177 NDREDSPLKIMDFGLSSV---EGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVI 233
            D     +KI DFG++       Y          + ++SPE+L     T+ SD+WS GV+
Sbjct: 168 EDFT---VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV 224

Query: 234 LYILLSG-YPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPS 292
           L+ + +    P+   SN Q  + +M G          N      +L+      +P  RPS
Sbjct: 225 LWEIATLAEQPYQGLSNEQVLRFVMEGG---LLDKPDNCPDMLFELMRMCWQYNPKMRPS 281

Query: 293 AQELLNH 299
             E+++ 
Sbjct: 282 FLEIISS 288

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score =  152 bits (385), Expect = 6e-43
 Identities = 49/301 (16%), Positives = 102/301 (33%), Gaps = 50/301 (16%)

Query: 12  YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFF 71
           Y+V   +G G F V+  G      +  QVAIK   R                        
Sbjct: 7   YKVGRRIGEGSFGVIFEGTNLLNNQ--QVAIKFEPR------------------------ 40

Query: 72  PTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFD 131
                       L +E    + +    +    + ++Y   ++     L+++L        
Sbjct: 41  ------RSDAPQLRDEYRTYKLL----AGCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDL 90

Query: 132 RIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLND--REDSPLKIMDF 189
             +   ++     A   +Q+   + ++H+ ++V+RD+KP+N L      +  + + ++DF
Sbjct: 91  LDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDF 150

Query: 190 GLS--------SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSG- 240
           G+                    L G+  Y+S    L    + + D+ +LG +    L G 
Sbjct: 151 GMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGS 210

Query: 241 --YPPFIAQSNRQKQQMIMAGEFSFY-EQTWKNISSSAKQLISSLLTVDPNRRPSAQELL 297
             +    A +N+QK + I   + S    +          + +     +  +  P    L 
Sbjct: 211 LPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQ 270

Query: 298 N 298
            
Sbjct: 271 G 271

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  152 bits (385), Expect = 8e-43
 Identities = 66/293 (22%), Positives = 112/293 (38%), Gaps = 47/293 (16%)

Query: 16  DILGRGGFSVVRRGI-KKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTR 74
           +++GRG F  V  G      G+    A+K+L RI                          
Sbjct: 33  EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-------------------------T 67

Query: 75  KQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDV-YEDQNGVHLILELCSGGELFDRI 133
               VS  L   E ++M+        HPNV+ L  +    +    ++L     G+L + I
Sbjct: 68  DIGEVSQFL--TEGIIMKDFS-----HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI 120

Query: 134 VAQERYMEVG-AAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLS 192
             +     V        Q+A+G+  L     VHRDL   NC+     E   +K+ DFGL+
Sbjct: 121 RNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCML---DEKFTVKVADFGLA 177

Query: 193 -----SVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIA 246
                          G    + +++ E+L   + T+KSD+WS GV+L+ L++ G PP+  
Sbjct: 178 RDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 237

Query: 247 QSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH 299
            +       ++ G         +       +++          RPS  EL++ 
Sbjct: 238 VNTFDITVYLLQGRRLLQP---EYCPDPLYEVMLKCWHPKAEMRPSFSELVSR 287

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  138 bits (348), Expect = 1e-37
 Identities = 52/329 (15%), Positives = 97/329 (29%), Gaps = 83/329 (25%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIG 69
               + + +G+G F  V RG  +      +VA+K                          
Sbjct: 3   RTIVLQESIGKGRFGEVWRGKWRG----EEVAVKIF------------------------ 34

Query: 70  FFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNG----VHLILELCS 125
                            EI     +      H N++         NG    + L+ +   
Sbjct: 35  -----SSREERSWFREAEIYQTVML-----RHENILGFIAADNKDNGTWTQLWLVSDYHE 84

Query: 126 GGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQA--------NIVHRDLKPENCLFLN 177
            G LFD +  +      G   +    A GLA LH           I HRDLK +N L   
Sbjct: 85  HGSLFDYL-NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV-- 141

Query: 178 DREDSPLKIMDFGL-----SSVEGYTDPVVGLFGSIDYVSPEALLQD------RITSKSD 226
            +++    I D GL     S+ +          G+  Y++PE L             ++D
Sbjct: 142 -KKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRAD 200

Query: 227 MWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNI--------------- 271
           ++++G++ + +           + Q     +       E+  K +               
Sbjct: 201 IYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQS 260

Query: 272 ---SSSAKQLISSLLTVDPNRRPSAQELL 297
                   +++      +   R +A  + 
Sbjct: 261 CEALRVMAKIMRECWYANGAARLTALRIK 289

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  138 bits (348), Expect = 1e-37
 Identities = 62/313 (19%), Positives = 109/313 (34%), Gaps = 58/313 (18%)

Query: 10  DEYEVTDILGRGGFSVVRRGIKKTCGETN---QVAIKTLRRIGSTTPYGFPGSRGSSSSS 66
           D  ++   LGRG F  V         +T     VA+K L+              G++ S 
Sbjct: 13  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKE-------------GATHSE 59

Query: 67  QIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDV-YEDQNGVHLILELCS 125
                              +E+ ++  I      H NV++L     +    + +I+E C 
Sbjct: 60  HRALM--------------SELKILIHIGH----HLNVVNLLGACTKPGGPLMVIVEFCK 101

Query: 126 GGELFDRIVAQERYM----------------EVGAAAVIRQIAEGLAALHQANIVHRDLK 169
            G L   + ++                             Q+A+G+  L     +HRDL 
Sbjct: 102 FGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLA 161

Query: 170 PENCLFLNDREDSPLKIMDFGLSSVEGYTDPVV---GLFGSIDYVSPEALLQDRITSKSD 226
             N L     E + +KI DFGL+         V        + +++PE +     T +SD
Sbjct: 162 ARNILL---SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSD 218

Query: 227 MWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVD 286
           +WS GV+L+ + S            ++      E +         +    Q +      +
Sbjct: 219 VWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA-PDYTTPEMYQTMLDCWHGE 277

Query: 287 PNRRPSAQELLNH 299
           P++RP+  EL+ H
Sbjct: 278 PSQRPTFSELVEH 290

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  137 bits (344), Expect = 1e-36
 Identities = 67/356 (18%), Positives = 120/356 (33%), Gaps = 88/356 (24%)

Query: 12  YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFF 71
           Y +   LG G FS V             VA+K +R                         
Sbjct: 15  YILVRKLGWGHFSTVWLAKDMVNNT--HVAMKIVRG------------------------ 48

Query: 72  PTRKQVSVSDALLTNEILVMRKI------VENVSPHPNVIDLYDVYED--QNGVHLILEL 123
                  V      +EI +++++       E+     +++ L D +     NGVH+++  
Sbjct: 49  -----DKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVF 103

Query: 124 CSGG---ELFDRIVAQERYMEVGAAAVIRQIAEGLAAL-HQANIVHRDLKPENCLF-LND 178
              G       +         +    + +Q+  GL  +  +  I+H D+KPEN L  + D
Sbjct: 104 EVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVD 163

Query: 179 REDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILL 238
             ++ ++I    L +   Y +       + +Y SPE LL       +D+WS   +++ L+
Sbjct: 164 SPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELI 223

Query: 239 SGYPPFIAQSNRQ--------KQQMIMAGEFSFY-------------------------- 264
           +G   F                Q + + GE   Y                          
Sbjct: 224 TGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKF 283

Query: 265 ----------EQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAKEE 310
                      +  K+ +      +S +L +DP +R  A  L+NHPW+      EE
Sbjct: 284 WPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGMEE 339

>d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]} Length = 187

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  108 bits (271), Expect = 3e-28
 Identities = 48/172 (27%), Positives = 82/172 (47%), Gaps = 8/172 (4%)

Query: 346 RTKKLKNLLGSHDLNEEEIQNLRIHFRTICANGDNATLSEFEEVLKAM-NMSSLVPLAPR 404
           + + ++ L       E+E+Q     F   C +G     + F+++ K           A  
Sbjct: 6   KPEVVEELTRKTYFTEKEVQQWYKGFIKDCPSGQL-DAAGFQKIYKQFFPFGDPTKFATF 64

Query: 405 IFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRA 464
           +F++FD N+DG ++  E +   S   +   D+ LR  F++YD+D  G IT+ E+  ++ A
Sbjct: 65  VFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDA 124

Query: 465 -----LPDDCLPVDITEPGK-LDEIFDLMDANNDGKVTFDEFRAAMQRDSSL 510
                     LP +   P K +D IF +MD N DGK+T  EF+   + D S+
Sbjct: 125 IYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKADPSI 176

>d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} Length = 181

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Neurocalcin
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  105 bits (263), Expect = 4e-27
 Identities = 50/172 (29%), Positives = 84/172 (48%), Gaps = 8/172 (4%)

Query: 346 RTKKLKNLLGSHDLNEEEIQNLRIHFRTICANGDNATLSEFEEVLKAM-NMSSLVPLAPR 404
           R + +++LL S D  E EIQ     F   C +G + ++ EF+++             A  
Sbjct: 5   RPEVMQDLLESTDFTEHEIQEWYKGFLRDCPSG-HLSMEEFKKIYGNFFPYGDASKFAEH 63

Query: 405 IFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRA 464
           +F  FD N DGT+D RE +   S   + + +  L+  F MYD+D +G I+K E+  +++A
Sbjct: 64  VFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQA 123

Query: 465 LPDDCLPVDITEPGK------LDEIFDLMDANNDGKVTFDEFRAAMQRDSSL 510
           +      V      +       ++IF  MD N DGK++ +EF    + D S+
Sbjct: 124 IYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKSDPSI 175

>d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 178

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Kchip1, Kv4 potassium channel-interacting protein
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  104 bits (261), Expect = 7e-27
 Identities = 44/168 (26%), Positives = 74/168 (44%), Gaps = 8/168 (4%)

Query: 350 LKNLLGSHDLNEEEIQNLRIHFRTICANGDNATLSEFEEVLKAM-NMSSLVPLAPRIFDL 408
           L+ L    +  + E+Q L   F+  C +G       F+++             A  +F+ 
Sbjct: 1   LEQLEAQTNFTKRELQVLYRGFKNECPSG-VVNEETFKQIYAQFFPHGDASTYAHYLFNA 59

Query: 409 FDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDD 468
           FD  + G+V   + +   S L +    + LR  F +YDI++ G I KEE+  +++A+ D 
Sbjct: 60  FDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDM 119

Query: 469 CLPVDITEPGK------LDEIFDLMDANNDGKVTFDEFRAAMQRDSSL 510
                     +      +D  F  MD N DG VT DEF  + Q D ++
Sbjct: 120 MGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQEDDNI 167

>d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 190

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  101 bits (252), Expect = 1e-25
 Identities = 42/167 (25%), Positives = 74/167 (44%), Gaps = 6/167 (3%)

Query: 350 LKNLLGSHDLNEEEIQNLRIHFRTICANGDNATLSEFEEVLKAMNMSSLVPLAPRIFDLF 409
           L  L  S   +  EIQ     F   C +G  A     +   +     S    A  +F +F
Sbjct: 13  LTCLKQSTYFDRREIQQWHKGFLRDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVF 72

Query: 410 DNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPD-- 467
           D + +G +   E +   S+  +   ++ L   F++YD++  G IT +E+ +++ ++    
Sbjct: 73  DKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMM 132

Query: 468 ----DCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDSSL 510
                    + T   ++ +IF LMD N DG +T DEFR   + D S+
Sbjct: 133 GSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSKVDPSI 179

>d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]} Length = 201

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Recoverin
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  101 bits (253), Expect = 2e-25
 Identities = 40/170 (23%), Positives = 69/170 (40%), Gaps = 10/170 (5%)

Query: 350 LKNLLGSHDLNEEEIQNLRIHFRTICANGDNATLSEFEEVLKAM-NMSSLVPLAPRIFDL 408
           L+ L  +    EEE+ +    F   C +G   T  EF+ +       +     A  +F  
Sbjct: 13  LEELQLNTKFTEEELSSWYQSFLKECPSG-RITRQEFQTIYSKFFPEADPKAYAQHVFRS 71

Query: 409 FDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDD 468
           FD N DGT+D +E +         + +  L   F +YD+D +G I+K EV  ++ A+   
Sbjct: 72  FDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKM 131

Query: 469 CLPVDITEPGK--------LDEIFDLMDANNDGKVTFDEFRAAMQRDSSL 510
             P D     +         ++I+      +D K+T  EF      +  +
Sbjct: 132 ISPEDTKHLPEDENTPEKRAEKIWGFFGKKDDDKLTEKEFIEGTLANKEI 181

>d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]} Length = 189

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Guanylate cyclase activating protein 2, GCAP-2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 92.2 bits (228), Expect = 3e-22
 Identities = 38/172 (22%), Positives = 74/172 (43%), Gaps = 12/172 (6%)

Query: 350 LKNLLGSHDLNEEEIQNLRIHFRTICANGDNATLSEFEEVLKAMNMSSLVPLAPRIFDLF 409
            +        +  ++Q     F   C +G    + EF+   K  +          +F  F
Sbjct: 9   AEENGAVGAADAAQLQEWYKKFLEECPSG-TLFMHEFKRFFKVPDNEEATQYVEAMFRAF 67

Query: 410 DNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRA----- 464
           D N D T+D  E +   + + +   +  L+  F++YD DR+GCI ++E+  ++ +     
Sbjct: 68  DTNGDNTIDFLEYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLK 127

Query: 465 ------LPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDSSL 510
                 +  +     +T    +D IF L+D N DG+++ +EF    +RD  +
Sbjct: 128 KACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGARRDKWV 179

>d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 183

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin B-like protein 2
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 89.2 bits (220), Expect = 3e-21
 Identities = 44/168 (26%), Positives = 74/168 (44%), Gaps = 8/168 (4%)

Query: 359 LNEEEIQNLRIHFRTICANGDNA---TLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDG 415
            +  EI+ L   F+ I +   +       EF+  L   N       A R+FDLFD   +G
Sbjct: 11  FSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKE-SLFADRVFDLFDTKHNG 69

Query: 416 TVDMREIL-CGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRAL--PDDCLPV 472
            +   E           +  DD +   FQ+YD+ + G I ++EV  M+ A          
Sbjct: 70  ILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLK 129

Query: 473 DITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDSS-LQDVVLSSLR 519
           D      +D+ F+  D  +DGK+  +E+R+ + R  S L+++ L  L+
Sbjct: 130 DTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVLRHPSLLKNMTLQYLK 177

>d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]} Length = 180

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium- and integrin-binding protein, CIB
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.0 bits (212), Expect = 4e-20
 Identities = 29/163 (17%), Positives = 60/163 (36%), Gaps = 12/163 (7%)

Query: 359 LNEEEIQNLRIHFRTICANGDNA------TLSEFEEVLKAMNMSSLVPLAPRIFDLFD-N 411
           L ++EI      F  +      +          FE++L    + +  P   RI  +F  +
Sbjct: 11  LTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILSLPELKAN-PFKERICRVFSTS 69

Query: 412 NRDGTVDMREILCGFSSLR-KSQGDDALRLCFQMYDIDRSGCITKEEVASMLRAL---PD 467
               ++   + L   S     +  D      F+++D D  G + +E+++ ++  L    +
Sbjct: 70  PAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGE 129

Query: 468 DCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDSSL 510
           D           +D I +  D + DG +   EF+  + R    
Sbjct: 130 DTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISRSPDF 172

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 82.9 bits (204), Expect = 4e-19
 Identities = 37/226 (16%), Positives = 68/226 (30%), Gaps = 37/226 (16%)

Query: 12  YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFF 71
             +  ++G G  S V     +      +  +K  +              G +S  ++   
Sbjct: 2   DAIGKLMGEGKESAVFNCYSEK---FGECVVKFHKV-------------GHTSFKKVKEK 45

Query: 72  PTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFD 131
                +  S   + +     R + +       V  +Y    +     +++EL    E   
Sbjct: 46  RDYGDLHFSVLAIRSARNEFRALQKLQ--GLAVPKVYAWEGN----AVLMELIDAKE--- 96

Query: 132 RIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGL 191
                 R        V+  I E +A  +   IVH DL   N L      +  + I+DF  
Sbjct: 97  ----LYRVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLV----SEEGIWIIDFPQ 148

Query: 192 SSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYIL 237
           S   G       L   +  +           ++ D+ S   I  IL
Sbjct: 149 SVEVGEEGWREILERDVRNII--TYFSRTYRTEKDINS--AIDRIL 190

>d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 162

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 79.6 bits (195), Expect = 3e-18
 Identities = 40/152 (26%), Positives = 67/152 (44%), Gaps = 11/152 (7%)

Query: 359 LNEEEIQNLRIHFRTICANGDNA-TLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTV 417
           L+EE I   +  F    A+G    +  E   V++ +  +        I +  D +  GT+
Sbjct: 14  LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73

Query: 418 DMREIL----CGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVD 473
           D  E L           K + ++ L  CF+++D +  G I  EE+  +LRA  +     D
Sbjct: 74  DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEED 133

Query: 474 ITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQ 505
           I      +++    D NNDG++ FDEF   M+
Sbjct: 134 I------EDLMKDSDKNNDGRIDFDEFLKMME 159

>d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 162

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 43.8 bits (102), Expect = 8e-06
 Identities = 13/62 (20%), Positives = 27/62 (43%)

Query: 404 RIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLR 463
             F +FD N DG +D+ E+     +  +   ++ +    +  D +  G I  +E   M+ 
Sbjct: 100 NCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMME 159

Query: 464 AL 465
            +
Sbjct: 160 GV 161

>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]} Length = 146

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]

 Score = 74.9 bits (183), Expect = 1e-16
 Identities = 34/148 (22%), Positives = 66/148 (44%), Gaps = 8/148 (5%)

Query: 359 LNEEEIQNLRIHFRTICANGDNA-TLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTV 417
           L EE+I   +  F     +GD   T  E   V++++  +        + +  D + +GT+
Sbjct: 3   LTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 62

Query: 418 DMREILCGFSSLRKSQG-DDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITE 476
           D  E L   +   K Q  ++ L   F+++D D +G I+  E+  ++  L +     ++  
Sbjct: 63  DFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEV-- 120

Query: 477 PGKLDEIFDLMDANNDGKVTFDEFRAAM 504
               DE+    D + DG + ++EF   M
Sbjct: 121 ----DEMIREADIDGDGHINYEEFVRMM 144

>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]} Length = 146

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]

 Score = 51.0 bits (121), Expect = 2e-08
 Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 5/102 (4%)

Query: 404 RIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLR 463
             F LFD + DGT+  +E+     SL ++  +  L+      D D +G I   E  S++ 
Sbjct: 13  EAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMA 72

Query: 464 ALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQ 505
               +    +     +L E F + D + +G ++  E R  M 
Sbjct: 73  RKMKEQDSEE-----ELIEAFKVFDRDGNGLISAAELRHVMT 109

>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]} Length = 146

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]

 Score = 39.1 bits (90), Expect = 3e-04
 Identities = 16/61 (26%), Positives = 28/61 (45%)

Query: 404 RIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLR 463
             F +FD + +G +   E+    ++L +   DD +    +  DID  G I  EE   M+ 
Sbjct: 86  EAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMV 145

Query: 464 A 464
           +
Sbjct: 146 S 146

>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]} Length = 146

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]

 Score = 36.0 bits (82), Expect = 0.003
 Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 6/77 (7%)

Query: 436 DALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKV 495
              +  F ++D D  G IT +E+ ++        L  + TE  +L ++ + +DA+ +G +
Sbjct: 9   AEFKEAFALFDKDGDGTITTKELGTV-----MRSLGQNPTEA-ELQDMINEVDADGNGTI 62

Query: 496 TFDEFRAAMQRDSSLQD 512
            F EF + M R    QD
Sbjct: 63  DFPEFLSLMARKMKEQD 79

>d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]} Length = 141

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.4 bits (179), Expect = 3e-16
 Identities = 27/146 (18%), Positives = 61/146 (41%), Gaps = 8/146 (5%)

Query: 361 EEEIQNLRIHFRTICANGDNA-TLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDM 419
           EE+ Q +R  F    A+G     + E +  ++A+          ++    D    G ++ 
Sbjct: 2   EEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNF 61

Query: 420 REILCGFSSLRKSQG-DDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPG 478
            + L   +     +   + +   F+++D D +G I+ + +  + + L ++    ++    
Sbjct: 62  GDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEEL---- 117

Query: 479 KLDEIFDLMDANNDGKVTFDEFRAAM 504
              E+ D  D + DG+V+  EF   M
Sbjct: 118 --QEMIDEADRDGDGEVSEQEFLRIM 141

>d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]} Length = 141

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.4 bits (114), Expect = 2e-07
 Identities = 18/103 (17%), Positives = 44/103 (42%), Gaps = 5/103 (4%)

Query: 404 RIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLR 463
             FDLFD +  GT+D++E+     +L      + ++      D + +G +   +  +++ 
Sbjct: 10  EAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMT 69

Query: 464 ALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR 506
               +    +     ++ + F L D +  GK++F   +   + 
Sbjct: 70  QKMSEKDTKE-----EILKAFKLFDDDETGKISFKNLKRVAKE 107

>d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 156

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 73.8 bits (180), Expect = 4e-16
 Identities = 37/153 (24%), Positives = 67/153 (43%), Gaps = 12/153 (7%)

Query: 359 LNEEEIQNLRIHFRTICANGDNATLS--EFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGT 416
           L EE+    +  F       ++ ++S  E  +V++ +  +        + D  D +  GT
Sbjct: 8   LTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 67

Query: 417 VDM----REILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPV 472
           VD       ++       K + ++ L   F+M+D +  G I  EE+  ML+A  +     
Sbjct: 68  VDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITED 127

Query: 473 DITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQ 505
           DI      +E+    D NNDG++ +DEF   M+
Sbjct: 128 DI------EELMKDGDKNNDGRIDYDEFLEFMK 154

>d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 156

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 42.2 bits (98), Expect = 3e-05
 Identities = 13/62 (20%), Positives = 29/62 (46%)

Query: 404 RIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLR 463
            +F +FD N DG +D+ E+     +  ++  +D +    +  D +  G I  +E    ++
Sbjct: 95  DLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 154

Query: 464 AL 465
            +
Sbjct: 155 GV 156

>d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 146

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 69.1 bits (168), Expect = 1e-14
 Identities = 27/153 (17%), Positives = 67/153 (43%), Gaps = 9/153 (5%)

Query: 356 SHDLNEEEIQNLRIHFRTICANGDNA-TLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRD 414
           S +L EE+I   +  F     + + + + SE   V++++ +S        + +  D + +
Sbjct: 1   SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGN 60

Query: 415 GTVDMREILCGFSSLRKSQG-DDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVD 473
             ++  E L   S   KS   +  L   F+++D +  G I+  E+  +L ++ +     +
Sbjct: 61  HQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAE 120

Query: 474 ITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR 506
           +      D++   +  +  G++   +F A + +
Sbjct: 121 V------DDMLREVS-DGSGEINIQQFAALLSK 146

>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 109

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

 Score = 67.6 bits (165), Expect = 2e-14
 Identities = 22/103 (21%), Positives = 41/103 (39%), Gaps = 6/103 (5%)

Query: 405 IFDLFDN-NRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLR 463
           I    D    +G+ + ++         K+   + ++  F+  D D SG I +EE+  +L+
Sbjct: 11  IKKALDAVKAEGSFNHKKFFALVG--LKAMSANDVKKVFKAIDADASGFIEEEELKFVLK 68

Query: 464 ALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR 506
           +   D   +   E           D + DGK+  DEF   +  
Sbjct: 69  SFAADGRDLTDAE---TKAFLKAADKDGDGKIGIDEFETLVHE 108

>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 109

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

 Score = 43.0 bits (101), Expect = 6e-06
 Identities = 15/109 (13%), Positives = 44/109 (40%), Gaps = 11/109 (10%)

Query: 359 LNEEEIQNLRIHFRTICANGDNATLSEFEEVLKAMNMSSLVPLAPR-IFDLFDNNRDGTV 417
           L  ++I+      +   A G   + +  ++    + + ++     + +F   D +  G +
Sbjct: 6   LKADDIKKALDAVK---AEG---SFN-HKKFFALVGLKAMSANDVKKVFKAIDADASGFI 58

Query: 418 D---MREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLR 463
           +   ++ +L  F++  +   D   +   +  D D  G I  +E  +++ 
Sbjct: 59  EEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFETLVH 107

>d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} Length = 109

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Leopard shark (Triakis semifasciata) [TaxId: 30493]

 Score = 67.3 bits (164), Expect = 2e-14
 Identities = 24/103 (23%), Positives = 46/103 (44%), Gaps = 7/103 (6%)

Query: 404 RIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLR 463
           +    F +   GT D +          K + D  ++  F++ D D+SG I +EE+  +L+
Sbjct: 13  KAISAFKD--PGTFDYKRFFHLVG--LKGKTDAQVKEVFEILDKDQSGFIEEEELKGVLK 68

Query: 464 ALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR 506
                   ++ TE      +    D+++DGK+  DEF   + +
Sbjct: 69  GFSAHGRDLNDTET---KALLAAGDSDHDGKIGADEFAKMVAQ 108

>d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]} Length = 165

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin regulatory subunit (B-chain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.8 bits (164), Expect = 6e-14
 Identities = 40/158 (25%), Positives = 77/158 (48%), Gaps = 5/158 (3%)

Query: 359 LNEEEIQNLRIHFRTICANGDNATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVD 418
            + +EI+ L   F+ +  +    +LS  E    ++      PL  R+ D+FD + +G VD
Sbjct: 10  FDADEIKRLGKRFKKLDLDNSG-SLSVEE--FMSLPELQQNPLVQRVIDIFDTDGNGEVD 66

Query: 419 MREILCGFSSLRKSQGDDA-LRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEP 477
            +E + G S        +  LR  F++YD+D+ G I+  E+  +L+ +  + L  D    
Sbjct: 67  FKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLK-DTQLQ 125

Query: 478 GKLDEIFDLMDANNDGKVTFDEFRAAMQRDSSLQDVVL 515
             +D+     D + DG+++F+EF A +      + +V+
Sbjct: 126 QIVDKTIINADKDGDGRISFEEFCAVVGGLDIHKKMVV 163

>d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} Length = 188

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]

 Score = 67.8 bits (165), Expect = 7e-14
 Identities = 30/171 (17%), Positives = 62/171 (36%), Gaps = 22/171 (12%)

Query: 352 NLLGSHDLNEEEI-QNLRIHFRTICANGDNATLSEFEEVLKAMNMSSLVPLAP------- 403
           NL     L+EEEI  N +  F  +  +    ++ E + +L  +                 
Sbjct: 6   NLPDEKVLSEEEIDDNFKTLFSKLAGDDMEISVKELQTILNRIISKHKDLRTNGFSLESC 65

Query: 404 -RIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASML 462
             + +L D + +G + + E                    F+ +D+D+SG ++  E+   +
Sbjct: 66  RSMVNLMDRDGNGKLGLVEFN------ILWNRIRNYLTIFRKFDLDKSGSMSAYEMRMAI 119

Query: 463 RALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDSSLQDV 513
            A            P +L ++     A+++  + FD F   + R   L  +
Sbjct: 120 EAAGFKL-------PCQLHQVIVARFADDELIIDFDNFVRCLVRLEILFKI 163

>d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 108

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Oncomodulin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 63.4 bits (154), Expect = 4e-13
 Identities = 20/98 (20%), Positives = 40/98 (40%), Gaps = 5/98 (5%)

Query: 408 LFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPD 467
           L +     T + ++        + S     ++  F+  D D+SG +  +E+   L+    
Sbjct: 15  LQECQDPDTFEPQKFFQTSGLSKMS--ASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQS 72

Query: 468 DCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQ 505
           D   +  +E      + D  D + DGK+  DEF+  + 
Sbjct: 73  DARELTESET---KSLMDAADNDGDGKIGADEFQEMVH 107

>d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 108

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Oncomodulin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 44.9 bits (106), Expect = 1e-06
 Identities = 17/84 (20%), Positives = 34/84 (40%), Gaps = 4/84 (4%)

Query: 385 EFEEVLKAMNMSSLVPLAPR-IFDLFDNNRDGTVD---MREILCGFSSLRKSQGDDALRL 440
           E ++  +   +S +     + IF   DN++ G +D   ++  L  F S  +   +   + 
Sbjct: 25  EPQKFFQTSGLSKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKS 84

Query: 441 CFQMYDIDRSGCITKEEVASMLRA 464
                D D  G I  +E   M+ +
Sbjct: 85  LMDAADNDGDGKIGADEFQEMVHS 108

>d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Length = 68

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium vector protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

 Score = 62.2 bits (151), Expect = 4e-13
 Identities = 11/72 (15%), Positives = 34/72 (47%), Gaps = 5/72 (6%)

Query: 435 DDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGK 494
           ++ +   F+++D +  G I  +E   +++ + ++ L        +++E     D + +G 
Sbjct: 1   EEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLT-----DAEVEEAMKEADEDGNGV 55

Query: 495 VTFDEFRAAMQR 506
           +   EF   +++
Sbjct: 56  IDIPEFMDLIKK 67

>d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Length = 68

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium vector protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

 Score = 42.9 bits (101), Expect = 3e-06
 Identities = 15/61 (24%), Positives = 25/61 (40%), Gaps = 1/61 (1%)

Query: 404 RIFDLFDNNRDGTVDMREILCGFSSL-RKSQGDDALRLCFQMYDIDRSGCITKEEVASML 462
           R F +FD N DG +D  E       +  +   D  +    +  D D +G I   E   ++
Sbjct: 6   RAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLI 65

Query: 463 R 463
           +
Sbjct: 66  K 66

>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 107

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

 Score = 62.3 bits (151), Expect = 9e-13
 Identities = 20/92 (21%), Positives = 35/92 (38%), Gaps = 5/92 (5%)

Query: 414 DGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVD 473
             +   +E         KS   D ++  F + D D+SG I ++E+   L+        + 
Sbjct: 20  ADSFKHKEFFAKVGLASKS--LDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALT 77

Query: 474 ITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQ 505
             E           D + DG +  DEF A ++
Sbjct: 78  DAET---KAFLADGDKDGDGMIGVDEFAAMIK 106

>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 107

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

 Score = 43.8 bits (103), Expect = 3e-06
 Identities = 18/84 (21%), Positives = 36/84 (42%), Gaps = 4/84 (4%)

Query: 385 EFEEVLKAMNMSSLVPLAPR-IFDLFDNNRDGTVDMRE---ILCGFSSLRKSQGDDALRL 440
           + +E    + ++S      +  F + D ++ G ++  E    L  FS   ++  D   + 
Sbjct: 24  KHKEFFAKVGLASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKA 83

Query: 441 CFQMYDIDRSGCITKEEVASMLRA 464
                D D  G I  +E A+M++A
Sbjct: 84  FLADGDKDGDGMIGVDEFAAMIKA 107

>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} Length = 77

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Caltractin (centrin 2)
species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]

 Score = 60.3 bits (146), Expect = 2e-12
 Identities = 17/74 (22%), Positives = 37/74 (50%), Gaps = 6/74 (8%)

Query: 435 DDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGK 494
            + +   F+++D D SG IT +++  + + L ++    ++       E+    D N+D +
Sbjct: 8   REEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEEL------QEMIAEADRNDDNE 61

Query: 495 VTFDEFRAAMQRDS 508
           +  DEF   M++ S
Sbjct: 62  IDEDEFIRIMKKTS 75

>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} Length = 77

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Caltractin (centrin 2)
species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]

 Score = 46.4 bits (110), Expect = 2e-07
 Identities = 11/60 (18%), Positives = 30/60 (50%)

Query: 404 RIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLR 463
           + F LFD++  GT+ ++++      L ++  ++ L+      D +    I ++E   +++
Sbjct: 13  KAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMK 72

>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} Length = 77

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Caltractin (centrin 2)
species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]

 Score = 35.2 bits (81), Expect = 0.002
 Identities = 13/64 (20%), Positives = 21/64 (32%), Gaps = 4/64 (6%)

Query: 361 EEEIQNLRIHFRTICANGDNA-TLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDM 419
            EEI      FR    +     T+ +   V K +  +        +    D N D  +D 
Sbjct: 8   REEILKA---FRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDE 64

Query: 420 REIL 423
            E +
Sbjct: 65  DEFI 68

>d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]} Length = 99

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Nucleobindin 1 (CALNUC)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.8 bits (147), Expect = 3e-12
 Identities = 17/86 (19%), Positives = 34/86 (39%), Gaps = 10/86 (11%)

Query: 432 SQGDDALRLCFQMYDIDRSGCITKEEVASMLRAL----------PDDCLPVDITEPGKLD 481
                  +  F ++DI+  G + ++E+ ++               DD   ++       +
Sbjct: 12  DPNRFNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMRE 71

Query: 482 EIFDLMDANNDGKVTFDEFRAAMQRD 507
            +   +D N D  VT +EF A+ QR 
Sbjct: 72  HVMKNVDTNQDRLVTLEEFLASTQRK 97

>d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} Length = 109

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Rat (Rattus rattus) [TaxId: 10117]

 Score = 60.4 bits (146), Expect = 4e-12
 Identities = 20/103 (19%), Positives = 41/103 (39%), Gaps = 7/103 (6%)

Query: 404 RIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLR 463
           +    F      + D ++         K +  D ++  F + D D+SG I ++E+ S+L+
Sbjct: 13  KAIGAFTA--ADSFDHKKFFQMVG--LKKKSADDVKKVFHILDKDKSGFIEEDELGSILK 68

Query: 464 ALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR 506
               D   +      +   +    D + DGK+  +EF   +  
Sbjct: 69  GFSSDARDLS---AKETKTLMAAGDKDGDGKIGVEEFSTLVAE 108

>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 67

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin-related protein T21P5.17
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 58.8 bits (142), Expect = 6e-12
 Identities = 13/70 (18%), Positives = 34/70 (48%), Gaps = 6/70 (8%)

Query: 437 ALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVT 496
           + +  F+ +D ++ G ++ +E   +  A        DI       + F+ +D + +G++ 
Sbjct: 2   SAKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDI------VKFFEEIDVDGNGELN 55

Query: 497 FDEFRAAMQR 506
            DEF + +++
Sbjct: 56  ADEFTSCIEK 65

>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 67

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin-related protein T21P5.17
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 48.0 bits (114), Expect = 3e-08
 Identities = 14/62 (22%), Positives = 29/62 (46%)

Query: 404 RIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLR 463
           R+F+ FD N+DG + + E      +       + +   F+  D+D +G +  +E  S + 
Sbjct: 5   RVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIE 64

Query: 464 AL 465
            +
Sbjct: 65  KM 66

>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 67

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin-related protein T21P5.17
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 34.1 bits (78), Expect = 0.003
 Identities = 13/65 (20%), Positives = 24/65 (36%), Gaps = 1/65 (1%)

Query: 366 NLRIHFRTICANGDNA-TLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILC 424
           + +  F     N D   +L EF EV  A +         + F+  D + +G ++  E   
Sbjct: 2   SAKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTS 61

Query: 425 GFSSL 429
               +
Sbjct: 62  CIEKM 66

>d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} Length = 182

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

 Score = 62.0 bits (149), Expect = 7e-12
 Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 9/149 (6%)

Query: 359 LNEEEIQNLRIHFRTICANGDNA-TLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTV 417
           L+EEEI  L+  F+ I  +     T  E ++ LK +    +      + D  D ++ GT+
Sbjct: 4   LSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTI 63

Query: 418 DMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEP 477
           D  E +     L K + ++ L   F  +D D SG IT +E+    +    D + +D    
Sbjct: 64  DYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFGLDDIHIDD--- 120

Query: 478 GKLDEIFDLMDANNDGKVTFDEFRAAMQR 506
                +   +D +NDG++ + EF A M++
Sbjct: 121 -----MIKEIDQDNDGQIDYGEFAAMMRK 144

>d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]} Length = 174

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Sandworm (Nereis diversicolor) [TaxId: 126592]

 Score = 61.6 bits (148), Expect = 9e-12
 Identities = 28/163 (17%), Positives = 54/163 (33%), Gaps = 25/163 (15%)

Query: 360 NEEEIQNLRIHFRTICANGDNA-TLSEFEEVLKAM-----------NMSSLVPLAPRIFD 407
           ++  +Q ++ +F  I  + D A T  +FE + +              +            
Sbjct: 1   SDLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNF 60

Query: 408 LFDNNRDGTVDMREILCGFSSLRKSQGDDA-----LRLCFQMYDIDRSGCITKEEVASML 462
           L        +D    +     + K+    +     L L F+  D +    I+++E     
Sbjct: 61  LTAVAGGKGIDETTFINSMKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFF 120

Query: 463 RALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQ 505
             L          +       FD +D NNDG ++ +EF  A  
Sbjct: 121 GMLG--------LDKTMAPASFDAIDTNNDGLLSLEEFVIAGS 155

>d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]} Length = 174

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Sandworm (Nereis diversicolor) [TaxId: 126592]

 Score = 47.4 bits (111), Expect = 6e-07
 Identities = 16/114 (14%), Positives = 33/114 (28%), Gaps = 12/114 (10%)

Query: 404 RIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQM-----------YDIDRSGC 452
             F+  D ++DG +   +         K     A      M             +     
Sbjct: 10  TYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVAGGKG 69

Query: 453 ITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR 506
           I +    + ++ +  +     + E   L   F  +D N D  ++ DE+      
Sbjct: 70  IDETTFINSMKEMVKNPEAKSVVEG-PLPLFFRAVDTNEDNNISRDEYGIFFGM 122

>d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]} Length = 174

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Sandworm (Nereis diversicolor) [TaxId: 126592]

 Score = 45.0 bits (105), Expect = 4e-06
 Identities = 11/74 (14%), Positives = 21/74 (28%), Gaps = 5/74 (6%)

Query: 438 LRLCFQMYDIDRSGCITKEEVASMLRAL-----PDDCLPVDITEPGKLDEIFDLMDANND 492
           ++  F   D D+ G IT+ +  SM                 + +         L      
Sbjct: 8   MKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVAGG 67

Query: 493 GKVTFDEFRAAMQR 506
             +    F  +M+ 
Sbjct: 68  KGIDETTFINSMKE 81

>d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]} Length = 174

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Sandworm (Nereis diversicolor) [TaxId: 126592]

 Score = 40.0 bits (92), Expect = 2e-04
 Identities = 8/28 (28%), Positives = 16/28 (57%)

Query: 479 KLDEIFDLMDANNDGKVTFDEFRAAMQR 506
           K+   F+ +D + DG +T  +F +  +R
Sbjct: 7   KMKTYFNRIDFDKDGAITRMDFESMAER 34

>d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]} Length = 176

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calerythrin
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 61.6 bits (148), Expect = 1e-11
 Identities = 27/168 (16%), Positives = 57/168 (33%), Gaps = 32/168 (19%)

Query: 362 EEIQNLRIHFRTICANGDNA-TLSEFEEVLKAMN---------------MSSLVPLAPRI 405
                L+  F     +G+ A   ++FE+  + +                 ++   L   +
Sbjct: 4   IASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYL 63

Query: 406 FDLFDNNRDGTVDMREILCGFSSLR--------KSQGDDALRLCFQMYDIDRSGCITKEE 457
                   DG++   + +    +L                ++    M D +  G I  +E
Sbjct: 64  AKEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADE 123

Query: 458 VASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQ 505
            A+ L AL             +  E F+ +D N +G+++ DE   A++
Sbjct: 124 FAAWLTALGMS--------KAEAAEAFNQVDTNGNGELSLDELLTAVR 163

>d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]} Length = 176

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calerythrin
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 43.9 bits (102), Expect = 1e-05
 Identities = 12/81 (14%), Positives = 27/81 (33%), Gaps = 9/81 (11%)

Query: 435 DDALRLCFQMYDIDRSGCITKEEVASMLRAL-------PDDCLPVDITEP--GKLDEIFD 485
            D L+  F  +D D +G + + +     + +               +     G  D +  
Sbjct: 6   SDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAK 65

Query: 486 LMDANNDGKVTFDEFRAAMQR 506
                +DG +T ++F    + 
Sbjct: 66  EAGVGSDGSLTEEQFIRVTEN 86

>d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} Length = 81

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]

 Score = 58.4 bits (141), Expect = 1e-11
 Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 6/76 (7%)

Query: 430 RKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDA 489
            K + ++ L   F+M+D +  G I  EE+  ML+A  +     DI      +E+    D 
Sbjct: 9   SKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDI------EELMKDGDK 62

Query: 490 NNDGKVTFDEFRAAMQ 505
           NNDG++ +DEF   M+
Sbjct: 63  NNDGRIDYDEFLEFMK 78

>d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} Length = 81

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]

 Score = 45.0 bits (106), Expect = 6e-07
 Identities = 13/62 (20%), Positives = 29/62 (46%)

Query: 404 RIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLR 463
            +F +FD N DG +D+ E+     +  ++  +D +    +  D +  G I  +E    ++
Sbjct: 19  DLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 78

Query: 464 AL 465
            +
Sbjct: 79  GV 80

>d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} Length = 81

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Polcalcin
domain: Polcalcin Che a 3
species: Pigweed (Chenopodium album) [TaxId: 3559]

 Score = 57.2 bits (138), Expect = 3e-11
 Identities = 16/75 (21%), Positives = 31/75 (41%), Gaps = 7/75 (9%)

Query: 438 LRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTF 497
               F+ +D +  G I+  E+   L+ L           P ++  +   +D + DG ++F
Sbjct: 8   RERIFKRFDTNGDGKISSSELGDALKTLGSVT-------PDEVRRMMAEIDTDGDGFISF 60

Query: 498 DEFRAAMQRDSSLQD 512
           DEF    + +  L  
Sbjct: 61  DEFTDFARANRGLVK 75

>d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} Length = 81

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Polcalcin
domain: Polcalcin Che a 3
species: Pigweed (Chenopodium album) [TaxId: 3559]

 Score = 47.6 bits (113), Expect = 7e-08
 Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 1/64 (1%)

Query: 404 RIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLR 463
           RIF  FD N DG +   E+     +L     D+  R+     D D  G I+ +E     R
Sbjct: 10  RIFKRFDTNGDGKISSSELGDALKTLGSVTPDEVRRM-MAEIDTDGDGFISFDEFTDFAR 68

Query: 464 ALPD 467
           A   
Sbjct: 69  ANRG 72

>d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 75

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 56.5 bits (136), Expect = 5e-11
 Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 6/75 (8%)

Query: 431 KSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDAN 490
           K + ++ L  CF+++D +  G I  EE+  +LRA  +            ++++    D N
Sbjct: 4   KGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHV------IEEDIEDLMKDSDKN 57

Query: 491 NDGKVTFDEFRAAMQ 505
           NDG++ FDEF   M+
Sbjct: 58  NDGRIDFDEFLKMME 72

>d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 75

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 45.7 bits (108), Expect = 3e-07
 Identities = 13/62 (20%), Positives = 27/62 (43%)

Query: 404 RIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLR 463
             F +FD N DG +D+ E+     +  +   ++ +    +  D +  G I  +E   M+ 
Sbjct: 13  NCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMME 72

Query: 464 AL 465
            +
Sbjct: 73  GV 74

>d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]} Length = 187

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]

 Score = 58.8 bits (141), Expect = 8e-11
 Identities = 26/176 (14%), Positives = 48/176 (27%), Gaps = 28/176 (15%)

Query: 359 LNEEEIQNLRIHFRTICANGDNA-TLSEFEEVLKAMNMSSLV----------PLAPRIFD 407
            N   I   +  F  +  N +   +L E       + +++L                 F 
Sbjct: 6   DNPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFG 65

Query: 408 LFDNNRDGTVDMREILCGFSSL-----------RKSQGDDALRLCFQMYDIDRSGCITKE 456
                     D    + G+  L             +         F + D D++G IT +
Sbjct: 66  GAGMKYGVETDWPAYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLD 125

Query: 457 EVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDSSLQD 512
           E  +  +A                +E F + D +  G++  DE            D
Sbjct: 126 EWKAYTKAAGIIQ------SSEDCEETFRVCDIDESGQLDVDEMTRQHLGFWYTMD 175

>d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} Length = 321

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
species: Physarum polycephalum [TaxId: 5791]

 Score = 60.8 bits (146), Expect = 9e-11
 Identities = 13/65 (20%), Positives = 28/65 (43%), Gaps = 5/65 (7%)

Query: 440 LCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDE 499
           + +   D D+SG ++KEEV  +L                  +  F ++D ++   +++ E
Sbjct: 257 ILYAFADFDKSGQLSKEEVQKVLEDAHIPESARKK-----FEHQFSVVDVDDSKSLSYQE 311

Query: 500 FRAAM 504
           F   +
Sbjct: 312 FVMLV 316

>d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} Length = 321

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
species: Physarum polycephalum [TaxId: 5791]

 Score = 46.5 bits (109), Expect = 4e-06
 Identities = 31/256 (12%), Positives = 76/256 (29%), Gaps = 23/256 (8%)

Query: 269 KNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAKEEEMDAEIVSRLQSFNARRK 328
            + +    +           +   A+       V  +    E  + E  +      A ++
Sbjct: 31  TSFAHKEDRDRLEAQIAQKEQEQKAKLAEYDQKVQNEFDARERAEREREAARGDAAAEKQ 90

Query: 329 LRAAAIASVLSSTIFLRRTKKLKNLLGSHDLNEEEIQNLRIHFRTICANGDNA-TLSEFE 387
             A+ +  +        R +  K +L     +EE+   LR  F +   +G    +  + +
Sbjct: 91  RLASLLKDLEDDASGYNRLRPSKPML-----SEEDTNILRQLFLSSAVSGSGKFSFQDLK 145

Query: 388 EVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDM---------REILCGFSSLRKSQGDDAL 438
           +VL     +       ++F + +N+  G +              L        +  +  L
Sbjct: 146 QVLAKYADTIPEGPLKKLFVMVENDTKGRMSYITLVAVANDLAALVADFRKIDTNSNGTL 205

Query: 439 RLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPG--------KLDEIFDLMDAN 490
                     R G   K    ++ R   +D                   L  ++   D +
Sbjct: 206 SRKEFREHFVRLGFDKKSVQDALFRYADEDESDDVGFSEYVHLGLCLLVLRILYAFADFD 265

Query: 491 NDGKVTFDEFRAAMQR 506
             G+++ +E +  ++ 
Sbjct: 266 KSGQLSKEEVQKVLED 281

>d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} Length = 321

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
species: Physarum polycephalum [TaxId: 5791]

 Score = 38.5 bits (88), Expect = 0.001
 Identities = 25/182 (13%), Positives = 59/182 (32%), Gaps = 23/182 (12%)

Query: 287 PNRRPSAQEL-LNHPWVIGDSAKEEEMDAEIVSRLQSFNARRKLRAAAIASVLSSTIFLR 345
             R  + +++  N   +            E   RL++  A+++    A  +         
Sbjct: 8   TQREANVKKVHENLEELQKKLDHTSFAHKEDRDRLEAQIAQKEQEQKAKLAEYD------ 61

Query: 346 RTKKLKNLLGSHDLNEEEIQNLRIHFRTICANGDNATLSEFEEVLKAMNMSSLVPLAP-- 403
             +K++N   + +  E E +  R            A+L + +    A   + L P  P  
Sbjct: 62  --QKVQNEFDARERAEREREAARGDAAAE--KQRLASLLK-DLEDDASGYNRLRPSKPML 116

Query: 404 ---------RIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCIT 454
                    ++F     +  G    +++    +    +  +  L+  F M + D  G ++
Sbjct: 117 SEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAKYADTIPEGPLKKLFVMVENDTKGRMS 176

Query: 455 KE 456
             
Sbjct: 177 YI 178

>d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} Length = 321

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
species: Physarum polycephalum [TaxId: 5791]

 Score = 37.7 bits (86), Expect = 0.002
 Identities = 23/168 (13%), Positives = 51/168 (30%), Gaps = 10/168 (5%)

Query: 338 LSSTIFLRRTKKLKNLLGSHDLNEEEIQNLRIHFRTICANGDNATLSEFEEVLKAMNMSS 397
           L  T F  +  +   L       E+E +     +     N       E  E  +      
Sbjct: 28  LDHTSFAHKEDR-DRLEAQIAQKEQEQKAKLAEYDQKVQN--EFDARERAEREREAARGD 84

Query: 398 LVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEE 457
                 R+  L  +  D       +      L +   +  LR  F    +  SG  + ++
Sbjct: 85  AAAEKQRLASLLKDLEDDASGYNRLRPSKPMLSEEDTNI-LRQLFLSSAVSGSGKFSFQD 143

Query: 458 VASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQ 505
           +  +L    D      +       ++F +++ +  G++++    A   
Sbjct: 144 LKQVLAKYADTIPEGPL------KKLFVMVENDTKGRMSYITLVAVAN 185

>d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]} Length = 172

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Sorcin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.1 bits (137), Expect = 3e-10
 Identities = 29/158 (18%), Positives = 54/158 (34%), Gaps = 21/158 (13%)

Query: 362 EEIQNLRIHFRTICANGDNA-TLSEFEEVLKAMNMS-SLVPLAPR----IFDLFDNNRDG 415
           +    L  +F  + A  D      E +  L    ++    P        +  + D +  G
Sbjct: 4   QTQDPLYGYFAAV-AGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSG 62

Query: 416 TVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDIT 475
           T+   E    +         +  R  F  +D DRSG +  +E+   L  +     P  + 
Sbjct: 63  TMGFNEFKELW------AVLNGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVN 116

Query: 476 EPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDSSLQDV 513
                         + +GK+TFD++ A   +  +L D 
Sbjct: 117 --------SIAKRYSTNGKITFDDYIACCVKLRALTDS 146

>d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Length = 185

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

 Score = 57.3 bits (137), Expect = 3e-10
 Identities = 20/180 (11%), Positives = 54/180 (30%), Gaps = 34/180 (18%)

Query: 359 LNEEEIQNLRIHFRTIC-ANGDNA-TLSEFEEVLKAMNMSSLVPLAP------------- 403
           LN+ + Q ++  F      N D +   ++FE+++      +   L+              
Sbjct: 2   LNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDE 61

Query: 404 --RIFDLFDNNRDGTV---------DMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGC 452
              +    D N+D  V         +     C   +   +   + +   F+  D+   G 
Sbjct: 62  WRDLKGRADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGI 121

Query: 453 ITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDSSLQD 512
           +  EE  +  +          +        +++++          + ++    R  +   
Sbjct: 122 VDLEEFQNYCKNF-------QLQCADV-PAVYNVITDGGKVTFDLNRYKELYYRLLTSPA 173

>d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Length = 185

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

 Score = 36.1 bits (82), Expect = 0.004
 Identities = 12/44 (27%), Positives = 20/44 (45%), Gaps = 1/44 (2%)

Query: 479 KLDEIFD-LMDANNDGKVTFDEFRAAMQRDSSLQDVVLSSLRQQ 521
           K+   FD  +D N+DG +  ++F   M R   +    LS    +
Sbjct: 9   KIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYK 52

>d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} Length = 165

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Grancalcin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.8 bits (134), Expect = 6e-10
 Identities = 22/149 (14%), Positives = 47/149 (31%), Gaps = 21/149 (14%)

Query: 371 FRTICANGDNA-TLSEFEEVLKAMNMSSL-----VPLAPRIFDLFDNNRDGTVDMREILC 424
           F  + A  D      E +  L    ++       +     +  + D +  G +       
Sbjct: 6   FSAV-AGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKE 64

Query: 425 GFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIF 484
            +++L   +        F   D D SG +   E+   +  +     P  +        I 
Sbjct: 65  LWAALNAWKE------NFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTL------TTIV 112

Query: 485 DLMDANNDGKVTFDEFRAAMQRDSSLQDV 513
                  +G++ FD++ A   +  +L D 
Sbjct: 113 KRYS--KNGRIFFDDYVACCVKLRALTDF 139

>d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} Length = 165

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Grancalcin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.1 bits (101), Expect = 2e-05
 Identities = 21/153 (13%), Positives = 41/153 (26%), Gaps = 21/153 (13%)

Query: 350 LKNLLGSHDLNEEEIQNLRIHFRTICANGDNATLSEFEEVLKAMNMSSLVPLAPRIFDLF 409
           L     +   +   ++  RI    +  +        F    +       +      F   
Sbjct: 25  LTQSGINGTYSPFSLETCRIMIAMLDRDHTGK--MGFNAFKELWAA---LNAWKENFMTV 79

Query: 410 DNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDC 469
           D +  GTV+  E+      +        L    + Y  +  G I  ++  +    L    
Sbjct: 80  DQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSKN--GRIFFDDYVACCVKL---- 133

Query: 470 LPVDITEPGKLDEIFDLMDANNDGKVT--FDEF 500
                     L + F   D    G     +D+F
Sbjct: 134 --------RALTDFFRKRDHLQQGSANFIYDDF 158

>d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} Length = 87

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

 Score = 53.4 bits (128), Expect = 8e-10
 Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 6/69 (8%)

Query: 436 DALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKV 495
             L+  F+M D D SG IT +E+   L+ +  + +  +I       ++ D  D +  G +
Sbjct: 23  GGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEI------KDLMDAADIDKSGTI 76

Query: 496 TFDEFRAAM 504
            + EF AA 
Sbjct: 77  DYGEFIAAT 85

>d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} Length = 87

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

 Score = 41.1 bits (96), Expect = 2e-05
 Identities = 14/60 (23%), Positives = 27/60 (45%), Gaps = 1/60 (1%)

Query: 404 RIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEE-VASML 462
            +F + D +  GT+   E+  G   +     +  ++      DID+SG I   E +A+ +
Sbjct: 27  ELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATV 86

>d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} Length = 87

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

 Score = 38.4 bits (89), Expect = 2e-04
 Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 1/69 (1%)

Query: 356 SHDLNEEEIQNLRIHFRTICANGDNA-TLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRD 414
           +  L+EEEI  L+  F+ I  +     T  E ++ LK +    +      + D  D ++ 
Sbjct: 14  AERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKS 73

Query: 415 GTVDMREIL 423
           GT+D  E +
Sbjct: 74  GTIDYGEFI 82

>d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]} Length = 186

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), M-type [TaxId: 10116]

 Score = 55.6 bits (133), Expect = 1e-09
 Identities = 27/166 (16%), Positives = 59/166 (35%), Gaps = 22/166 (13%)

Query: 357 HDLNEEEIQN-LRIHFRTICANGDNATLSEFEEVLKAMNMSSLVPLAP--------RIFD 407
            + NEE+I +  R  F  +       +  E + +L+ +        +          + D
Sbjct: 9   IEANEEDIGDGFRRLFAQLAGEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVD 68

Query: 408 LFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPD 467
           + D +  G + ++E    +            +  ++  D+DRSG +   E+   L     
Sbjct: 69  MLDEDGSGKLGLKEFYILW------TKIQKYQKIYREIDVDRSGTMNSYEMRKALEEAGF 122

Query: 468 DCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDSSLQDV 513
                    P +L ++     A+++  + FD F   + R   L  +
Sbjct: 123 KL-------PCQLHQVIVARFADDELIIDFDNFVRCLVRLEILFKI 161

>d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} Length = 78

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 52.5 bits (126), Expect = 1e-09
 Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 6/73 (8%)

Query: 436 DALRLCFQMYDI--DRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDG 493
             L+  F+ Y         ++KEE    L+ L     P  +  P  LD++F  +D N DG
Sbjct: 7   AELKSIFEKYAAKEGDPNQLSKEE----LKQLIQAEFPSLLKGPRTLDDLFQELDKNGDG 62

Query: 494 KVTFDEFRAAMQR 506
           +V+F+EF+  +++
Sbjct: 63  EVSFEEFQVLVKK 75

>d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]} Length = 100

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]

 Score = 53.1 bits (127), Expect = 1e-09
 Identities = 17/79 (21%), Positives = 33/79 (41%), Gaps = 3/79 (3%)

Query: 431 KSQGDDALRLCFQMYDI--DRSGCITKEEVASMLRA-LPDDCLPVDITEPGKLDEIFDLM 487
            +Q + ++     M+     R   I K  + +M++   P+     D      L ++F+  
Sbjct: 2   NTQAERSIIGMIDMFHKYTRRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKK 61

Query: 488 DANNDGKVTFDEFRAAMQR 506
           D N D K+ F EF + +  
Sbjct: 62  DKNEDKKIDFSEFLSLLGD 80

>d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]} Length = 93

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a3 [TaxId: 9606]

 Score = 51.8 bits (124), Expect = 3e-09
 Identities = 14/73 (19%), Positives = 29/73 (39%), Gaps = 3/73 (4%)

Query: 436 DALRLCFQMY-DIDRSGC-ITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDG 493
            A+   FQ Y         + + E+  +L+       P +  E    ++   ++D N D 
Sbjct: 9   AAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFREC-DYNKFMSVLDTNKDC 67

Query: 494 KVTFDEFRAAMQR 506
           +V F E+  ++  
Sbjct: 68  EVDFVEYVRSLAC 80

>d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 65

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 50.8 bits (121), Expect = 3e-09
 Identities = 17/70 (24%), Positives = 36/70 (51%), Gaps = 6/70 (8%)

Query: 435 DDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGK 494
           ++ +R  F+++D D +G I+  E+  ++  L +     ++      DE+    D + DG+
Sbjct: 2   EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV------DEMIREADIDGDGQ 55

Query: 495 VTFDEFRAAM 504
           V ++EF   M
Sbjct: 56  VNYEEFVQMM 65

>d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 65

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 41.5 bits (97), Expect = 7e-06
 Identities = 14/59 (23%), Positives = 27/59 (45%)

Query: 404 RIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASML 462
             F +FD + +G +   E+    ++L +   D+ +    +  DID  G +  EE   M+
Sbjct: 7   EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 65

>d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]} Length = 93

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a4 [TaxId: 9606]

 Score = 51.4 bits (123), Expect = 4e-09
 Identities = 14/73 (19%), Positives = 25/73 (34%), Gaps = 3/73 (4%)

Query: 436 DALRLCFQMYDI--DRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDG 493
           D +   F  Y         + K E+  +L       L     E     ++   +D+N D 
Sbjct: 9   DVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEA-AFQKLMSNLDSNRDN 67

Query: 494 KVTFDEFRAAMQR 506
           +V F E+   +  
Sbjct: 68  EVDFQEYCVFLSC 80

>d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 142

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

 Score = 52.7 bits (125), Expect = 5e-09
 Identities = 21/148 (14%), Positives = 49/148 (33%), Gaps = 9/148 (6%)

Query: 359 LNEEEIQNLRIHFRTICANGDNATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVD 418
           L +++IQ ++  F  I  + D       E++          P    +  +          
Sbjct: 1   LPQKQIQEMKEAFSMIDVDRDGFV--SKEDIKAISEQLGRAPDDKELTAMLKEAPGPLNF 58

Query: 419 MREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPG 478
              +      L  +  ++ +R  F M+D   +  +  E +  +L  + D+    ++    
Sbjct: 59  TMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEM---- 114

Query: 479 KLDEIFDLMDANNDGKVTFDEFRAAMQR 506
                F        GK  + +F A ++ 
Sbjct: 115 --RMTFKEAPVE-GGKFDYVKFTAMIKG 139

>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 81

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 51.1 bits (122), Expect = 5e-09
 Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 6/71 (8%)

Query: 436 DALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKV 495
              +  F M+D D  G I+ +E+ +++R L  +          +LD I + +D +  G +
Sbjct: 14  AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNP------TKEELDAIIEEVDEDGSGTI 67

Query: 496 TFDEFRAAMQR 506
            F+EF   M R
Sbjct: 68  DFEEFLVMMVR 78

>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 81

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 43.0 bits (101), Expect = 3e-06
 Identities = 16/59 (27%), Positives = 26/59 (44%)

Query: 404 RIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASML 462
             FD+FD +  G +  +E+      L ++   + L    +  D D SG I  EE   M+
Sbjct: 18  AAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 76

>d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]} Length = 134

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: EHCABP
species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]

 Score = 52.0 bits (123), Expect = 7e-09
 Identities = 31/143 (21%), Positives = 44/143 (30%), Gaps = 49/143 (34%)

Query: 401 LAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDR----------- 449
           +A  +F   D N DG V   E+    S  R  + +  L+L F+  D D            
Sbjct: 1   MAEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAK 60

Query: 450 ----------------------------SGCITKEEVASMLRALPDDCLPVDITEPGKLD 481
                                        G +TKEEV S  +    + +           
Sbjct: 61  FYGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKV----------A 110

Query: 482 EIFDLMDANNDGKVTFDEFRAAM 504
           E     DAN DG +T +EF    
Sbjct: 111 EQVMKADANGDGYITLEEFLEFS 133

>d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]} Length = 134

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: EHCABP
species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]

 Score = 38.9 bits (89), Expect = 2e-04
 Identities = 8/26 (30%), Positives = 17/26 (65%)

Query: 481 DEIFDLMDANNDGKVTFDEFRAAMQR 506
           + +F  +D N DG V+++E +A + +
Sbjct: 3   EALFKEIDVNGDGAVSYEEVKAFVSK 28

>d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]} Length = 189

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]

 Score = 53.1 bits (126), Expect = 8e-09
 Identities = 29/168 (17%), Positives = 47/168 (27%), Gaps = 28/168 (16%)

Query: 359 LNEEEIQNLRIHFRTICANGDNA-TLSEFEEVLKAMNMSSL----------VPLAPRIFD 407
            N   I+  +  F  +  NG+   TL E          + L                 F 
Sbjct: 8   DNPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFR 67

Query: 408 LFDNNRDGTVDMREILCGFSSLRKSQG-----------DDALRLCFQMYDIDRSGCITKE 456
                    +   + L G+  L  S+             +     F ++D D SG IT +
Sbjct: 68  GCGMEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLD 127

Query: 457 EVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAM 504
           E  +  +         D       +  F   D +N G +  DE     
Sbjct: 128 EWKAYGKISGISPSQEDC------EATFRHCDLDNAGDLDVDEMTRQH 169

>d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]} Length = 189

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]

 Score = 38.5 bits (88), Expect = 7e-04
 Identities = 10/29 (34%), Positives = 16/29 (55%)

Query: 479 KLDEIFDLMDANNDGKVTFDEFRAAMQRD 507
           +   +FD +D N +GK+T DE  +    D
Sbjct: 15  RHKHMFDFLDINGNGKITLDEIVSKASDD 43

>d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} Length = 76

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 49.9 bits (119), Expect = 1e-08
 Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 6/76 (7%)

Query: 435 DDALRLCFQMYDID--RSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANND 492
            + ++  F+++         I+KEE+  +++ L    L         LDE+ + +D N D
Sbjct: 4   PEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLK----GMSTLDEMIEEVDKNGD 59

Query: 493 GKVTFDEFRAAMQRDS 508
           G+V+F+EF   M++ S
Sbjct: 60  GEVSFEEFLVMMKKIS 75

>d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]} Length = 92

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]

 Score = 49.2 bits (117), Expect = 3e-08
 Identities = 16/71 (22%), Positives = 29/71 (40%), Gaps = 2/71 (2%)

Query: 436 DALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKV 495
           + +   F  +  D  G +TKE++  ++       L         +D+I   +D   DGKV
Sbjct: 9   ETMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPL-AVDKIMKDLDQCRDGKV 66

Query: 496 TFDEFRAAMQR 506
            F  F + +  
Sbjct: 67  GFQSFFSLIAG 77

>d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 77

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 48.5 bits (115), Expect = 4e-08
 Identities = 16/69 (23%), Positives = 37/69 (53%), Gaps = 6/69 (8%)

Query: 438 LRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTF 497
            +  F ++D D +G I+  E+A+++R+L       ++      +++ + +D + + ++ F
Sbjct: 12  FKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEV------NDLMNEIDVDGNHQIEF 65

Query: 498 DEFRAAMQR 506
            EF A M R
Sbjct: 66  SEFLALMSR 74

>d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 77

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 41.5 bits (97), Expect = 9e-06
 Identities = 18/107 (16%), Positives = 33/107 (30%), Gaps = 35/107 (32%)

Query: 356 SHDLNEEEIQNLRIHFRTICANGDNATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDG 415
           S +L EE+I   +                                     F LFD + +G
Sbjct: 1   SSNLTEEQIAEFK-----------------------------------EAFALFDKDNNG 25

Query: 416 TVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASML 462
           ++   E+     SL  S  +  +       D+D +  I   E  +++
Sbjct: 26  SISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALM 72

>d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 61

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 46.6 bits (110), Expect = 1e-07
 Identities = 11/65 (16%), Positives = 33/65 (50%), Gaps = 6/65 (9%)

Query: 436 DALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKV 495
           +     FQ++D + +G ++  ++  ML  L +     ++      DE+   ++ +++G++
Sbjct: 1   EDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEV------DELLKGVEVDSNGEI 54

Query: 496 TFDEF 500
            + +F
Sbjct: 55  DYKKF 59

>d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 61

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 39.2 bits (91), Expect = 4e-05
 Identities = 10/54 (18%), Positives = 24/54 (44%)

Query: 404 RIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEE 457
           + F +FD    G V + ++    + L +   D  +    +  ++D +G I  ++
Sbjct: 5   KAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKK 58

>d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]} Length = 98

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a13 [TaxId: 9606]

 Score = 47.6 bits (113), Expect = 1e-07
 Identities = 13/73 (17%), Positives = 27/73 (36%), Gaps = 6/73 (8%)

Query: 436 DALRLCFQMYDI--DRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDG 493
           + +   F  +     R   ++  E   ++       L     + G LDE    +D N D 
Sbjct: 14  ETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLK----DVGSLDEKMKSLDVNQDS 69

Query: 494 KVTFDEFRAAMQR 506
           ++ F+E+   +  
Sbjct: 70  ELKFNEYWRLIGE 82

>d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 152

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

 Score = 48.9 bits (115), Expect = 1e-07
 Identities = 24/152 (15%), Positives = 50/152 (32%), Gaps = 12/152 (7%)

Query: 359 LNEEEIQNLRIHFRTICANGDNA---TLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDG 415
           L+++EI +L+  F                +  +V + + ++        +          
Sbjct: 1   LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEKS 60

Query: 416 TVDMREI-LCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDI 474
                 +         +          F+ +D +  G I+  E+  +L AL +     D+
Sbjct: 61  LPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDV 120

Query: 475 TEPGKLDEIFDLMDANND--GKVTFDEFRAAM 504
                 DEI  L D   D  G V +++F   +
Sbjct: 121 ------DEIIKLTDLQEDLEGNVKYEDFVKKV 146

>d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]} Length = 89

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a6 [TaxId: 9606]

 Score = 47.2 bits (112), Expect = 1e-07
 Identities = 12/73 (16%), Positives = 28/73 (38%), Gaps = 5/73 (6%)

Query: 436 DALRLCFQMY-DIDRSGC-ITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDG 493
             L   F  Y   +     ++K+E+  +++        +   E   +  + + +D N D 
Sbjct: 9   GLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAE---IARLMEDLDRNKDQ 65

Query: 494 KVTFDEFRAAMQR 506
           +V F E+   +  
Sbjct: 66  EVNFQEYVTFLGA 78

>d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 170

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Phospholipase C-beta-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.9 bits (116), Expect = 2e-07
 Identities = 22/123 (17%), Positives = 38/123 (30%), Gaps = 16/123 (13%)

Query: 404 RIFDLFDNNRDGTVDMREILCGFSSLRK--SQGDDALRLCFQMYDIDRSGCITKEEVASM 461
           ++      N +G + ++     F + RK       A  L     D        +    S 
Sbjct: 13  KLK--MQLNSEGKIPVKNFFQMFPADRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSF 70

Query: 462 LRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAM---QRDSSLQDVVLSSL 518
           L           +    ++DEIF    A     +T +     +   QRDS L  ++    
Sbjct: 71  LM---------SLCPRPEIDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPA 121

Query: 519 RQQ 521
           R  
Sbjct: 122 RPD 124

>d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]} Length = 93

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]

 Score = 46.9 bits (111), Expect = 2e-07
 Identities = 17/73 (23%), Positives = 30/73 (41%), Gaps = 3/73 (4%)

Query: 436 DALRLCFQMYDI--DRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDG 493
           + L   F  +         ++K+E+  +L+      L V       +D+I   +D N DG
Sbjct: 9   ETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDAD-AVDKIMKELDENGDG 67

Query: 494 KVTFDEFRAAMQR 506
           +V F EF   +  
Sbjct: 68  EVDFQEFVVLVAA 80

>d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} Length = 82

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

 Score = 46.1 bits (109), Expect = 2e-07
 Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 7/70 (10%)

Query: 438 LRLCFQMYDID-RSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVT 496
            +  F ++ +    G I+ +E+  ++R L  +        P +L E+ D +D +  G V 
Sbjct: 17  FKAAFDIFVLGAEDGSISTKELGKVMRMLGQNP------TPEELQEMIDEVDEDGSGTVD 70

Query: 497 FDEFRAAMQR 506
           FDEF   M R
Sbjct: 71  FDEFLVMMVR 80

>d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} Length = 82

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

 Score = 40.7 bits (95), Expect = 2e-05
 Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 1/60 (1%)

Query: 404 RIFDLFD-NNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASML 462
             FD+F     DG++  +E+      L ++   + L+      D D SG +  +E   M+
Sbjct: 19  AAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMM 78

>d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} Length = 82

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

 Score = 37.3 bits (86), Expect = 3e-04
 Identities = 15/68 (22%), Positives = 28/68 (41%), Gaps = 2/68 (2%)

Query: 358 DLNEEEIQNLRIHFRTICANGDNATLS--EFEEVLKAMNMSSLVPLAPRIFDLFDNNRDG 415
            L EE+    +  F       ++ ++S  E  +V++ +  +        + D  D +  G
Sbjct: 8   QLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSG 67

Query: 416 TVDMREIL 423
           TVD  E L
Sbjct: 68  TVDFDEFL 75

>d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]} Length = 87

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]

 Score = 46.3 bits (110), Expect = 3e-07
 Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 3/73 (4%)

Query: 436 DALRLCFQMYDIDRSGC--ITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDG 493
           + +   F  Y + +     ++K E+  +L          +I +   +DEIF  +DAN D 
Sbjct: 8   EGIVNIFHQYSVRKGHFDTLSKGELKQLLTKE-LANTIKNIKDKAVIDEIFQGLDANQDE 66

Query: 494 KVTFDEFRAAMQR 506
           +V F EF + +  
Sbjct: 67  QVDFQEFISLVAI 79

>d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]} Length = 173

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain small (regulatory) subunit (domain VI)
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 48.4 bits (114), Expect = 3e-07
 Identities = 25/170 (14%), Positives = 54/170 (31%), Gaps = 37/170 (21%)

Query: 362 EEIQNLRIHFRTICANGDNATLSEFEEVLKAMNMSSLVPLA--------PRIFDLFDNNR 413
           EE++  R  F  +  +    + +E   +L  +                   +  + D++ 
Sbjct: 1   EEVRQFRRLFAQLAGDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDT 60

Query: 414 DGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVD 473
            G +   E    +++++K Q        ++ +D+DRSG I   E+     A         
Sbjct: 61  TGKLGFEEFKYLWNNIKKWQA------IYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHL 114

Query: 474 I--------TEPGKLD---------------EIFDLMDANNDGKVTFDEF 500
                     E G +D                 F  +D +  G++  +  
Sbjct: 115 YSMIIRRYSDEGGNMDFDNFISCLVRLDAMFRAFKSLDKDGTGQIQVNIQ 164

>d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]} Length = 73

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Rattus norvegicus [TaxId: 10116]

 Score = 45.4 bits (107), Expect = 4e-07
 Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 6/71 (8%)

Query: 436 DALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKV 495
              +  F ++D D  G IT +E+ +++R+L  +          +L ++ + +DA+ +G +
Sbjct: 8   AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP------TEAELQDMINEVDADGNGTI 61

Query: 496 TFDEFRAAMQR 506
            F EF   M R
Sbjct: 62  DFPEFLTMMAR 72

>d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]} Length = 73

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Rattus norvegicus [TaxId: 10116]

 Score = 41.9 bits (98), Expect = 7e-06
 Identities = 17/59 (28%), Positives = 28/59 (47%)

Query: 404 RIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASML 462
             F LFD + DGT+  +E+     SL ++  +  L+      D D +G I   E  +M+
Sbjct: 12  EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 70

>d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]} Length = 139

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.3 bits (106), Expect = 2e-06
 Identities = 15/142 (10%), Positives = 43/142 (30%), Gaps = 48/142 (33%)

Query: 404 RIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDAL------------------------- 438
             F+LFD   DG +   +      +L ++  +  +                         
Sbjct: 4   EAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPM 63

Query: 439 ----------------RLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDE 482
                              F+++D + +G +   E+  +L  L +     ++      + 
Sbjct: 64  LQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEV------ET 117

Query: 483 IFDLMDANNDGKVTFDEFRAAM 504
           +      +++G + ++ F   +
Sbjct: 118 VLA-GHEDSNGCINYEAFLKHI 138

>d1xk4c1 a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]} Length = 83

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]

 Score = 43.5 bits (103), Expect = 2e-06
 Identities = 12/62 (19%), Positives = 27/62 (43%), Gaps = 2/62 (3%)

Query: 441 CFQMYDIDRSGC--ITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFD 498
            F  Y +       + + E   ++R    + L  +      ++ I + +D N D +++F+
Sbjct: 15  TFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFE 74

Query: 499 EF 500
           EF
Sbjct: 75  EF 76

>d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]} Length = 95

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.9 bits (103), Expect = 2e-06
 Identities = 15/63 (23%), Positives = 23/63 (36%), Gaps = 8/63 (12%)

Query: 442 FQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFR 501
           F   D D  G ++  EV  +                  L  I+ L D  + GK++ D+F 
Sbjct: 16  FLKTDKDMDGFVSGLEVREIFLKTGLP--------STLLAHIWSLCDTKDCGKLSKDQFA 67

Query: 502 AAM 504
            A 
Sbjct: 68  LAF 70

>d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]} Length = 95

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.0 bits (93), Expect = 5e-05
 Identities = 13/60 (21%), Positives = 21/60 (35%), Gaps = 2/60 (3%)

Query: 404 RIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLR 463
            IF   D + DG V   E+   F           L   + + D    G ++K++ A    
Sbjct: 14  EIFLKTDKDMDGFVSGLEVREIFLKTGLPSTL--LAHIWSLCDTKDCGKLSKDQFALAFH 71

>d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]} Length = 99

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.1 bits (101), Expect = 4e-06
 Identities = 15/86 (17%), Positives = 31/86 (36%), Gaps = 8/86 (9%)

Query: 426 FSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFD 485
            S  + S G+      ++  +   +G +   +            L         L +I+D
Sbjct: 1   LSLTQLSSGNPVYEKYYRQVEAGNTGRVLALDA--------AAFLKKSGLPDLILGKIWD 52

Query: 486 LMDANNDGKVTFDEFRAAMQRDSSLQ 511
           L D +  G ++  EF  A++  +  Q
Sbjct: 53  LADTDGKGVLSKQEFFVALRLVACAQ 78

>d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 181

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Apoptosis-linked protein alg-2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 45.1 bits (105), Expect = 5e-06
 Identities = 19/135 (14%), Positives = 36/135 (26%), Gaps = 25/135 (18%)

Query: 404 RIFDLFDNNRDGTVDMREILCGFSSL-RKSQGDDALRLCFQMYDIDRSGCITKEEVASML 462
            +F   D +R G +   E+    S+          +R    M+D +    +   E   + 
Sbjct: 23  NVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVW 82

Query: 463 RALPDDCLPV------------------------DITEPGKLDEIFDLMDANNDGKVTFD 498
           + + D                                     D +    D    G++ FD
Sbjct: 83  KYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFD 142

Query: 499 EFRAAMQRDSSLQDV 513
           +F         L D+
Sbjct: 143 DFIQGCIVLQRLTDI 157

>d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 181

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Apoptosis-linked protein alg-2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.1 bits (92), Expect = 2e-04
 Identities = 21/164 (12%), Positives = 51/164 (31%), Gaps = 22/164 (13%)

Query: 339 SSTIFLRRTKKLKNLLGSHDLNEEEIQNLRIHFRTICANGDNATLSEFEEVLKAMNMSSL 398
           S  I     ++  +       N   ++++   F     + +N     F E        + 
Sbjct: 33  SGVISDNELQQALSNGTWTPFNPVTVRSIISMF-----DRENKAGVNFSEFTGVWKYITD 87

Query: 399 VPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEV 458
                R +D  ++      ++++     S       D    +  + +D    G I  ++ 
Sbjct: 88  WQNVFRTYDRDNSGMIDKNELKQA---LSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 144

Query: 459 ASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVT--FDEF 500
                 L             +L +IF   D + DG +   ++++
Sbjct: 145 IQGCIVLQ------------RLTDIFRRYDTDQDGWIQVSYEQY 176

>d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 146

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Light Chain Mlc1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 43.9 bits (102), Expect = 6e-06
 Identities = 14/139 (10%), Positives = 39/139 (28%), Gaps = 37/139 (26%)

Query: 405 IFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRA 464
           IF LFD    G +    +     ++  +  +  ++         R       +  + L  
Sbjct: 7   IFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIE 66

Query: 465 LPDDCLPVDITEPGK-------------------------------------LDEIFDLM 487
           + +  L        +                                     +DE+   +
Sbjct: 67  VNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGV 126

Query: 488 DANNDGKVTFDEFRAAMQR 506
           + +++G++ + +F   + R
Sbjct: 127 EVDSNGEIDYKKFIEDVLR 145

>d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 146

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Light Chain Mlc1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.7 bits (91), Expect = 2e-04
 Identities = 6/25 (24%), Positives = 10/25 (40%)

Query: 482 EIFDLMDANNDGKVTFDEFRAAMQR 506
           +IF L D    G +  D     ++ 
Sbjct: 6   DIFTLFDKKGQGAIAKDSLGDYLRA 30

>d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 146

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Light Chain Mlc1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.3 bits (90), Expect = 2e-04
 Identities = 9/29 (31%), Positives = 15/29 (51%)

Query: 437 ALRLCFQMYDIDRSGCITKEEVASMLRAL 465
           A +  F ++D    G I K+ +   LRA+
Sbjct: 3   ANKDIFTLFDKKGQGAIAKDSLGDYLRAI 31

>d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]} Length = 87

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]

 Score = 41.7 bits (98), Expect = 9e-06
 Identities = 13/73 (17%), Positives = 26/73 (35%), Gaps = 7/73 (9%)

Query: 436 DALRLCFQMY-DIDRSGCI-TKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDG 493
           +++   +  Y  I  +     ++++  +L                  D  F  +D N DG
Sbjct: 10  NSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQY-----IRKKGADVWFKELDINTDG 64

Query: 494 KVTFDEFRAAMQR 506
            V F EF   + +
Sbjct: 65  AVNFQEFLILVIK 77

>d1tuza_ a.39.1.7 (A:) Diacylglycerol kinase alpha, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 118

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Diacylglycerol kinase alpha, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.3 bits (99), Expect = 1e-05
 Identities = 19/104 (18%), Positives = 36/104 (34%), Gaps = 14/104 (13%)

Query: 350 LKNLLGSHDLNEEEIQNLRIHFRTICAN----GDNATLSEFEEVLKAMNMSSLVP--LAP 403
              L    + + +++ ++   F          GD      F++ LK       VP  L+ 
Sbjct: 13  FAQLQKYMEYSTKKVSDVLKLFEDGEMAKYVQGDAIGYEGFQQFLKIYLEVDNVPRHLSL 72

Query: 404 RIFDLFDNNRD--------GTVDMREILCGFSSLRKSQGDDALR 439
            +F  F+              V + ++ C FS L   + +D L 
Sbjct: 73  ALFQSFETGHCLNETNVTKDVVCLNDVSCYFSLLEGGRPEDKLE 116

>d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 140

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Cdc4p
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 42.3 bits (98), Expect = 2e-05
 Identities = 21/136 (15%), Positives = 42/136 (30%), Gaps = 42/136 (30%)

Query: 404 RIFDLFDNNRDGTVDMREILCGFSSLRKSQGD---------------------------- 435
           + F LFD +  G +    I     +  ++                               
Sbjct: 9   QAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIESTLPAEVDMEQFLQVLNRPNG 68

Query: 436 -------DALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMD 488
                  +     FQ++D D +G I   E+  +L +L +     ++      DE+   + 
Sbjct: 69  FDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEM------DELLKGVP 122

Query: 489 ANNDGKVTFDEFRAAM 504
              DG V + +F   +
Sbjct: 123 -VKDGMVNYHDFVQMI 137

>d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 140

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Cdc4p
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 35.8 bits (81), Expect = 0.004
 Identities = 10/35 (28%), Positives = 16/35 (45%)

Query: 432 SQGDDALRLCFQMYDIDRSGCITKEEVASMLRALP 466
           S  D   +  F ++D   +G I K  +  +LRA  
Sbjct: 1   STDDSPYKQAFSLFDRHGTGRIPKTSIGDLLRACG 35

>d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]} Length = 83

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: DJ-1-binding protein, DJBP
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.5 bits (94), Expect = 3e-05
 Identities = 16/87 (18%), Positives = 37/87 (42%), Gaps = 11/87 (12%)

Query: 420 REILCGFSSLRK--SQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEP 477
           R+IL   + L K  +    A+   F+ +D  ++  I++EE  ++                
Sbjct: 5   RDIL---ARLHKAVTSHYHAITQEFENFDTMKTNTISREEFRAICNRRVQIL------TD 55

Query: 478 GKLDEIFDLMDANNDGKVTFDEFRAAM 504
            + D +++ M  N  G++ + +F +  
Sbjct: 56  EQFDRLWNEMPVNAKGRLKYPDFLSRF 82

>d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]} Length = 83

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: DJ-1-binding protein, DJBP
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.3 bits (83), Expect = 0.001
 Identities = 10/78 (12%), Positives = 24/78 (30%), Gaps = 1/78 (1%)

Query: 385 EFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQM 444
           +    L     S    +  + F+ FD  +  T+   E     +   +   D+     +  
Sbjct: 6   DILARLHKAVTSHYHAIT-QEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNE 64

Query: 445 YDIDRSGCITKEEVASML 462
             ++  G +   +  S  
Sbjct: 65  MPVNAKGRLKYPDFLSRF 82

>d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]} Length = 94

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100p [TaxId: 9606]

 Score = 40.5 bits (95), Expect = 3e-05
 Identities = 15/62 (24%), Positives = 25/62 (40%), Gaps = 3/62 (4%)

Query: 441 CFQMYDIDRSGC--ITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFD 498
            F  Y         +TK E+  ++       L     +   +D++   +DAN D +V F 
Sbjct: 14  VFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQ-SGKDKDAVDKLLKDLDANGDAQVDFS 72

Query: 499 EF 500
           EF
Sbjct: 73  EF 74

>d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]} Length = 90

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Cow (Bos taurus), s100b [TaxId: 9913]

 Score = 40.5 bits (95), Expect = 3e-05
 Identities = 15/65 (23%), Positives = 28/65 (43%), Gaps = 3/65 (4%)

Query: 438 LRLCFQMYDIDRSGC--ITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKV 495
           L   F  Y         + K E+  ++       L  +I E   +D++ + +D++ DG+ 
Sbjct: 11  LIDVFHQYSGREGDKHKLKKSELKELINNELSHFLE-EIKEQEVVDKVMETLDSDGDGEC 69

Query: 496 TFDEF 500
            F EF
Sbjct: 70  DFQEF 74

>d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 92

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Reps1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.3 bits (91), Expect = 8e-05
 Identities = 16/67 (23%), Positives = 23/67 (34%), Gaps = 8/67 (11%)

Query: 438 LRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTF 497
               F+    D +G I                         +L  I++L D + DG +T 
Sbjct: 11  YVNQFKTIQPDLNGFIPGSAAKEFFTKSKLP--------ILELSHIWELSDFDKDGALTL 62

Query: 498 DEFRAAM 504
           DEF AA 
Sbjct: 63  DEFCAAF 69

>d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 92

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Reps1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.3 bits (86), Expect = 4e-04
 Identities = 9/60 (15%), Positives = 21/60 (35%), Gaps = 2/60 (3%)

Query: 404 RIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLR 463
             F     + +G +        F+  +       L   +++ D D+ G +T +E  +   
Sbjct: 13  NQFKTIQPDLNGFIPGSAAKEFFTKSKLP--ILELSHIWELSDFDKDGALTLDEFCAAFH 70

>d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]} Length = 95

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]

 Score = 37.8 bits (88), Expect = 3e-04
 Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 5/63 (7%)

Query: 441 CFQMYDIDRSGC--ITKEEVASMLRA-LPDDCLPVDITEPGKLDEIFDLMDANNDGKVTF 497
            FQ +         I+K E    +   L       +  +PG LD +   +D ++DG++ F
Sbjct: 14  IFQKHAGRDGNNTKISKTEFLIFMNTELA--AFTQNQKDPGVLDRMMKKLDLDSDGQLDF 71

Query: 498 DEF 500
            EF
Sbjct: 72  QEF 74

>d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]} Length = 182

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Programmed cell death 6 protein-like protein
species: Leishmania major [TaxId: 5664]

 Score = 38.9 bits (89), Expect = 5e-04
 Identities = 8/33 (24%), Positives = 16/33 (48%)

Query: 474 ITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR 506
           + +  +L E F  +D +  G ++  E  AA+  
Sbjct: 14  MNDNQELMEWFRAVDTDGSGAISVPELNAALSS 46

>d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]} Length = 182

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Programmed cell death 6 protein-like protein
species: Leishmania major [TaxId: 5664]

 Score = 36.2 bits (82), Expect = 0.004
 Identities = 26/172 (15%), Positives = 50/172 (29%), Gaps = 45/172 (26%)

Query: 362 EEIQNLRIHFRTICANGDNA-TLSEFEEVLKAMNMSS----------------------- 397
            + Q L   FR +  +G  A ++ E    L +  +                         
Sbjct: 15  NDNQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFD 74

Query: 398 -------LVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRS 450
                   +      F   D++ DG +D  E+     S      +   +   + +D  R 
Sbjct: 75  EFKDLHHFILSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRR 134

Query: 451 GCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVT--FDEF 500
           G +  ++   +   +              +  +F   D    G+VT  FD F
Sbjct: 135 GSLGFDDYVELSIFVCR------------VRNVFAFYDRERTGQVTFTFDTF 174

>d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]} Length = 182

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Programmed cell death 6 protein-like protein
species: Leishmania major [TaxId: 5664]

 Score = 36.2 bits (82), Expect = 0.004
 Identities = 11/42 (26%), Positives = 17/42 (40%)

Query: 428 SLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDC 469
           S R    +  L   F+  D D SG I+  E+ + L +     
Sbjct: 10  SARHMNDNQELMEWFRAVDTDGSGAISVPELNAALSSAGVPF 51

>d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]} Length = 110

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Pob1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.1 bits (80), Expect = 0.004
 Identities = 16/63 (25%), Positives = 24/63 (38%), Gaps = 8/63 (12%)

Query: 442 FQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFR 501
           F+    D S  I+     +                  +L  I++L DA+ DG +T  EF 
Sbjct: 28  FRSLQPDPSSFISGSVAKNFFTKSKLS--------IPELSYIWELSDADCDGALTLPEFC 79

Query: 502 AAM 504
           AA 
Sbjct: 80  AAF 82

>d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]} Length = 95

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.6 bits (79), Expect = 0.004
 Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 9/63 (14%)

Query: 442 FQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFR 501
           F       +G ++ ++V  +L       LPVDI     L  +++L D ++DG +  DEF 
Sbjct: 16  FDSLS-PVNGFLSGDKVKPVLLNS---KLPVDI-----LGRVWELSDIDHDGMLDRDEFA 66

Query: 502 AAM 504
            AM
Sbjct: 67  VAM 69

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	521
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	100.0
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.92
d1exra_	146	Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI	99.89
d1lkja_	146	Calmodulin {Baker's yeast (Saccharomyces cerevisia	99.88
d1wdcb_	142	Myosin Essential Chain {Bay scallop (Aequipecten i	99.88
d2obha1	141	Calmodulin {Human (Homo sapiens) [TaxId: 9606]}	99.86
d1fpwa_	190	Frequenin (neuronal calcium sensor 1) {Baker's yea	99.86
d1wdcc_	152	Myosin Regulatory Chain {Bay scallop (Aequipecten	99.86
d2mysb_	145	Myosin Essential Chain {Chicken (Gallus gallus) [T	99.86
d1dtla_	156	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	99.85
d1topa_	162	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	99.85
d1bjfa_	181	Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}	99.84
d1jbaa_	189	Guanylate cyclase activating protein 2, GCAP-2 {Co	99.84
d1jfja_	134	EHCABP {Entamoeba (Entamoeba histolytica) [TaxId:	99.84
d2mysc_	145	Myosin Regulatory Chain {Chicken (Gallus gallus) [	99.84
d1g8ia_	187	Frequenin (neuronal calcium sensor 1) {Human (Homo	99.84
d1omra_	201	Recoverin {Cow (Bos taurus) [TaxId: 9913]}	99.83
d1s6ia_	182	Calcium-dependent protein kinase sk5 CLD {Soybean	99.83
d1auib_	165	Calcineurin regulatory subunit (B-chain) {Human (H	99.83
d2zfda1	183	Calcineurin B-like protein 2 {Thale cress (Arabido	99.83
d1s6ca_	178	Kchip1, Kv4 potassium channel-interacting protein	99.82
d1ggwa_	140	Cdc4p {Fission yeast (Schizosaccharomyces pombe) [	99.82
d1y1xa_	182	Programmed cell death 6 protein-like protein {Leis	99.8
d1m45a_	146	Myosin Light Chain Mlc1p {Baker's yeast (Saccharom	99.8
d1xo5a_	180	Calcium- and integrin-binding protein, CIB {Human	99.8
d1hqva_	181	Apoptosis-linked protein alg-2 {Mouse (Mus musculu	99.78
d1w7jb1	139	Myosin Essential Chain {Human (Homo sapiens) [TaxI	99.76
d1k94a_	165	Grancalcin {Human (Homo sapiens) [TaxId: 9606]}	99.74
d1df0a1	186	Calpain large subunit, C-terminal domain (domain I	99.73
d1alva_	173	Calpain small (regulatory) subunit (domain VI) {Pi	99.71
d2scpa_	174	Sarcoplasmic calcium-binding protein {Sandworm (Ne	99.71
d1qxpa2	188	Calpain large subunit, C-terminal domain (domain I	99.7
d2sasa_	185	Sarcoplasmic calcium-binding protein {Amphioxus (B	99.7
d1ij5a_	321	Cbp40 (plasmodial specific CaII-binding protein LA	99.7
d1juoa_	172	Sorcin {Human (Homo sapiens) [TaxId: 9606]}	99.69
d1qv0a_	189	Calcium-regulated photoprotein {Hydrozoa (Obelia l	99.68
d5pala_	109	Parvalbumin {Leopard shark (Triakis semifasciata)	99.68
d1pvaa_	109	Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	99.67
d1nyaa_	176	Calerythrin {Saccharopolyspora erythraea [TaxId: 1	99.65
d1uhka1	187	Calcium-regulated photoprotein {Jellyfish (Aequore	99.65
d1k94a_	165	Grancalcin {Human (Homo sapiens) [TaxId: 9606]}	99.58
d2pvba_	107	Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	99.58
d1hqva_	181	Apoptosis-linked protein alg-2 {Mouse (Mus musculu	99.58
d1rwya_	109	Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]}	99.57
d2mysc_	145	Myosin Regulatory Chain {Chicken (Gallus gallus) [	99.55
d1df0a1	186	Calpain large subunit, C-terminal domain (domain I	99.54
d1juoa_	172	Sorcin {Human (Homo sapiens) [TaxId: 9606]}	99.52
d1wdcb_	142	Myosin Essential Chain {Bay scallop (Aequipecten i	99.52
d1rroa_	108	Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116	99.51
d1jfja_	134	EHCABP {Entamoeba (Entamoeba histolytica) [TaxId:	99.51
d1alva_	173	Calpain small (regulatory) subunit (domain VI) {Pi	99.5
d1exra_	146	Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI	99.49
d1qxpa2	188	Calpain large subunit, C-terminal domain (domain I	99.49
d1ggwa_	140	Cdc4p {Fission yeast (Schizosaccharomyces pombe) [	99.49
d1y1xa_	182	Programmed cell death 6 protein-like protein {Leis	99.49
d1lkja_	146	Calmodulin {Baker's yeast (Saccharomyces cerevisia	99.46
d1fw4a_	65	Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	99.45
d1jc2a_	75	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	99.44
d1wdcc_	152	Myosin Regulatory Chain {Bay scallop (Aequipecten	99.43
d2obha1	141	Calmodulin {Human (Homo sapiens) [TaxId: 9606]}	99.43
d1m45a_	146	Myosin Light Chain Mlc1p {Baker's yeast (Saccharom	99.43
d2opoa1	81	Polcalcin Che a 3 {Pigweed (Chenopodium album) [Ta	99.42
d1fi5a_	81	Troponin C {Chicken (Gallus gallus), cardiac isofo	99.41
d1c7va_	68	Calcium vector protein {Amphioxus (Branchiostoma l	99.41
d1oqpa_	77	Caltractin (centrin 2) {Green algae (Chlamydomonas	99.4
d1f54a_	77	Calmodulin {Baker's yeast (Saccharomyces cerevisia	99.39
d1w7jb1	139	Myosin Essential Chain {Human (Homo sapiens) [TaxI	99.39
d1tiza_	67	Calmodulin-related protein T21P5.17 {Thale cress (	99.39
d1avsa_	81	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	99.38
d2pq3a1	73	Calmodulin {Rattus norvegicus [TaxId: 10116]}	99.37
d2mysb_	145	Myosin Essential Chain {Chicken (Gallus gallus) [T	99.36
d2opoa1	81	Polcalcin Che a 3 {Pigweed (Chenopodium album) [Ta	99.36
d2fcea1	61	Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	99.35
d1fpwa_	190	Frequenin (neuronal calcium sensor 1) {Baker's yea	99.35
d1s6ja_	87	Calcium-dependent protein kinase sk5 CLD {Soybean	99.34
d1avsa_	81	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	99.34
d2zkmx1	170	Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI	99.34
d1wrka1	82	Troponin C {Human (Homo sapiens), cardiac isoform	99.34
d1dtla_	156	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	99.33
d1topa_	162	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	99.33
d1pvaa_	109	Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	99.32
d5pala_	109	Parvalbumin {Leopard shark (Triakis semifasciata)	99.31
d1s6ia_	182	Calcium-dependent protein kinase sk5 CLD {Soybean	99.31
d2pq3a1	73	Calmodulin {Rattus norvegicus [TaxId: 10116]}	99.31
d1omra_	201	Recoverin {Cow (Bos taurus) [TaxId: 9913]}	99.3
d1f54a_	77	Calmodulin {Baker's yeast (Saccharomyces cerevisia	99.3
d1jbaa_	189	Guanylate cyclase activating protein 2, GCAP-2 {Co	99.28
d1wrka1	82	Troponin C {Human (Homo sapiens), cardiac isoform	99.26
d1bjfa_	181	Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}	99.24
d1auib_	165	Calcineurin regulatory subunit (B-chain) {Human (H	99.24
d1g8ia_	187	Frequenin (neuronal calcium sensor 1) {Human (Homo	99.24
d1s6ja_	87	Calcium-dependent protein kinase sk5 CLD {Soybean	99.24
d1tiza_	67	Calmodulin-related protein T21P5.17 {Thale cress (	99.24
d1fw4a_	65	Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	99.23
d1fi5a_	81	Troponin C {Chicken (Gallus gallus), cardiac isofo	99.21
d1jc2a_	75	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	99.2
d1qx2a_	76	Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}	99.18
d1rwya_	109	Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]}	99.18
d2fcea1	61	Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	99.17
d1oqpa_	77	Caltractin (centrin 2) {Green algae (Chlamydomonas	99.17
d2pvba_	107	Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	99.14
d1rroa_	108	Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116	99.14
d2zfda1	183	Calcineurin B-like protein 2 {Thale cress (Arabido	99.14
d1c7va_	68	Calcium vector protein {Amphioxus (Branchiostoma l	99.12
d1s6ca_	178	Kchip1, Kv4 potassium channel-interacting protein	99.12
d1xo5a_	180	Calcium- and integrin-binding protein, CIB {Human	99.1
d1wlza1	83	DJ-1-binding protein, DJBP {Human (Homo sapiens) [	99.1
d1zfsa1	93	Calcyclin (S100) {Rat (Rattus norvegicus), s100a1	99.05
d1c07a_	95	Eps15 {Human (Homo sapiens) [TaxId: 9606]}	99.04
d1snla_	99	Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [Tax	99.03
d1fi6a_	92	Reps1 {Mouse (Mus musculus) [TaxId: 10090]}	99.01
d1qx2a_	76	Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}	98.99
d1c07a_	95	Eps15 {Human (Homo sapiens) [TaxId: 9606]}	98.98
d1wlza1	83	DJ-1-binding protein, DJBP {Human (Homo sapiens) [	98.98
d1cb1a_	78	Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]}	98.98
d1ksoa_	93	Calcyclin (S100) {Human (Homo sapiens), s100a3 [Ta	98.98
d1a4pa_	92	Calcyclin (S100) {Human (Homo sapiens), P11 s100a1	98.95
d1a4pa_	92	Calcyclin (S100) {Human (Homo sapiens), P11 s100a1	98.93
d1yuta1	98	Calcyclin (S100) {Human (Homo sapiens), s100a13 [T	98.92
d1cb1a_	78	Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]}	98.92
d2scpa_	174	Sarcoplasmic calcium-binding protein {Sandworm (Ne	98.92
d3c1va1	93	Calcyclin (S100) {Human (Homo sapiens), s100a4 [Ta	98.92
d2zkmx1	170	Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI	98.91
d1fi6a_	92	Reps1 {Mouse (Mus musculus) [TaxId: 10090]}	98.9
d3c1va1	93	Calcyclin (S100) {Human (Homo sapiens), s100a4 [Ta	98.89
d1yuta1	98	Calcyclin (S100) {Human (Homo sapiens), s100a13 [T	98.88
d1zfsa1	93	Calcyclin (S100) {Rat (Rattus norvegicus), s100a1	98.87
d1ij5a_	321	Cbp40 (plasmodial specific CaII-binding protein LA	98.86
d2jxca1	95	Eps15 {Human (Homo sapiens) [TaxId: 9606]}	98.86
d2sasa_	185	Sarcoplasmic calcium-binding protein {Amphioxus (B	98.84
d1k8ua_	89	Calcyclin (S100) {Human (Homo sapiens), s100a6 [Ta	98.82
d1ksoa_	93	Calcyclin (S100) {Human (Homo sapiens), s100a3 [Ta	98.82
d1k8ua_	89	Calcyclin (S100) {Human (Homo sapiens), s100a6 [Ta	98.82
d1xk4a1	87	Calcyclin (S100) {Human (Homo sapiens), calgranuli	98.81
d1uhka1	187	Calcium-regulated photoprotein {Jellyfish (Aequore	98.79
d1iq3a_	110	Pob1 {Human (Homo sapiens) [TaxId: 9606]}	98.79
d1xk4a1	87	Calcyclin (S100) {Human (Homo sapiens), calgranuli	98.78
d1snla_	99	Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [Tax	98.77
d2jxca1	95	Eps15 {Human (Homo sapiens) [TaxId: 9606]}	98.76
d1qv0a_	189	Calcium-regulated photoprotein {Hydrozoa (Obelia l	98.75
d1e8aa_	87	Calcyclin (S100) {Human (Homo sapiens), calgranuli	98.74
d1iq3a_	110	Pob1 {Human (Homo sapiens) [TaxId: 9606]}	98.74
d1qjta_	99	Eps15 {Mouse (Mus musculus) [TaxId: 10090]}	98.73
d1e8aa_	87	Calcyclin (S100) {Human (Homo sapiens), calgranuli	98.72
d1nyaa_	176	Calerythrin {Saccharopolyspora erythraea [TaxId: 1	98.71
d1psra_	100	Calcyclin (S100) {Human (Homo sapiens), psoriasin	98.7
d2hf5a1	33	Troponin C {Human (Homo sapiens), cardiac isoform	98.63
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	98.61
d1psra_	100	Calcyclin (S100) {Human (Homo sapiens), psoriasin	98.61
d1qjta_	99	Eps15 {Mouse (Mus musculus) [TaxId: 10090]}	98.55
d3cr5x1	90	Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId:	98.42
d1tuza_	118	Diacylglycerol kinase alpha, N-terminal domain {Hu	98.35
d1qlsa_	95	Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s1	98.32
d1j55a_	94	Calcyclin (S100) {Human (Homo sapiens), s100p [Tax	98.29
d2hf5a1	33	Troponin C {Human (Homo sapiens), cardiac isoform	98.24
d3cr5x1	90	Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId:	98.24
d1ctda_	34	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	98.22
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	98.12
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	98.12
d1qlsa_	95	Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s1	98.05
d1xk4c1	83	Calcyclin (S100) {Human (Homo sapiens), s100a9 (mr	98.0
d1j55a_	94	Calcyclin (S100) {Human (Homo sapiens), s100p [Tax	97.99
d1xk4c1	83	Calcyclin (S100) {Human (Homo sapiens), s100a9 (mr	97.98
d1ctda_	34	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	97.97
d1tuza_	118	Diacylglycerol kinase alpha, N-terminal domain {Hu	97.66
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	97.24
d1sraa_	151	C-terminal (EC) domain of BM-40/SPARC/osteonectin	97.22
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	96.92
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	96.47
d1sraa_	151	C-terminal (EC) domain of BM-40/SPARC/osteonectin	96.25
d1qasa1	94	Phosphoinositide-specific phospholipase C, isozyme	94.32
d1qasa1	94	Phosphoinositide-specific phospholipase C, isozyme	93.55
d2cclb1	59	Endo-1,4-beta-xylanase Y {Clostridium thermocellum	91.18
d1j7qa_	86	Calcium vector protein {Amphioxus (Branchiostoma l	89.31
d2cclb1	59	Endo-1,4-beta-xylanase Y {Clostridium thermocellum	89.06
d1eg3a1	125	Dystrophin {Human (Homo sapiens) [TaxId: 9606]}	88.37
d1pula1	103	Hypothetical protein c32e8.3 {Caenorhabditis elega	88.0
d1wlma1	138	Protein cgi-38 {Mouse (Mus musculus) [TaxId: 10090	85.13
d1h8ba_	73	alpha-Actinin {Human (Homo sapiens) [TaxId: 9606]}	84.22
d1dava_	71	Cellulosome endoglucanase SS {Clostridium thermoce	83.85
d1j7qa_	86	Calcium vector protein {Amphioxus (Branchiostoma l	83.65
d1dava_	71	Cellulosome endoglucanase SS {Clostridium thermoce	83.36
d2b59b1	60	Cellulosomal scaffolding protein A {Clostridium th	82.14

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.8e-65  Score=494.84  Aligned_cols=293  Identities=39%  Similarity=0.667  Sum_probs=241.6

Q ss_pred             cccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHH
Q 009980            4 ETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDAL   83 (521)
Q Consensus         4 ~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (521)
                      +.+.+.++|++.+.||+|+||+||+|+++.  +++.||||++.+.....                           ....
T Consensus         3 ~~edi~d~Y~~~~~lG~G~fg~Vy~~~~~~--~~~~vAvK~i~~~~~~~---------------------------~~~~   53 (307)
T d1a06a_           3 QAEDIRDIYDFRDVLGTGAFSEVILAEDKR--TQKLVAIKCIAKKALEG---------------------------KEGS   53 (307)
T ss_dssp             ECSCGGGTEEEEEESBSGGGGGEEEEEETT--TCCEEEEEEEEC------------------------------------
T ss_pred             CCCCCccceEEEEEEeeccCeEEEEEEECC--CCCEEEEEEEchHHhhh---------------------------HHHH
Confidence            456789999999999999999999999988  78999999997643321                           1234


Q ss_pred             HHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 009980           84 LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANI  163 (521)
Q Consensus        84 ~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i  163 (521)
                      +.+|+.+++++     +|||||++++++.+++.+|||||||+||+|.+++...+.+++.++..++.||+.||.|||++||
T Consensus        54 ~~~Ei~il~~l-----~HpnIv~l~~~~~~~~~~~lvmE~~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~i  128 (307)
T d1a06a_          54 MENEIAVLHKI-----KHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGI  128 (307)
T ss_dssp             -CHHHHHHHTC-----CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHhC-----CCCCCCcEEEEEEECCEEEEEEeccCCCcHHHhhhcccCCCHHHHHHHHHHHHHHHHhhhhcee
Confidence            77899999998     9999999999999999999999999999999999998999999999999999999999999999


Q ss_pred             eeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCC
Q 009980          164 VHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPP  243 (521)
Q Consensus       164 ~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~p  243 (521)
                      +||||||+|||+...+.++.+||+|||+|+...........+||+.|+|||++.+..|+.++||||+||++|+|++|.+|
T Consensus       129 iHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~P  208 (307)
T d1a06a_         129 VHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP  208 (307)
T ss_dssp             CCSCCCGGGEEESSSSTTCCEEECCC------------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             eeEEecccceeecccCCCceEEEeccceeEEccCCCeeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCC
Confidence            99999999999976566789999999999877655556667899999999999999999999999999999999999999


Q ss_pred             CCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCCCcchhchHHHHHHHHhH
Q 009980          244 FIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAKEEEMDAEIVSRLQSF  323 (521)
Q Consensus       244 f~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~~~~~~~~~~~~~~~~~~  323 (521)
                      |.+.+..+....+..+...++.+.++.+|+++++||.+||.+||.+|||++|+|+||||++..............+++..
T Consensus       209 f~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~~~~~~~~~~~~~~~~~~~  288 (307)
T d1a06a_         209 FYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQSVSEQIKKN  288 (307)
T ss_dssp             CCCSSHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTTSSCCCCCCCHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHhccCCCCCCccccCCCHHHHHHHHHHccCCHhHCcCHHHHhcCHhhCCCCccccccchhHHHHHHHH
Confidence            99999999999999999888888888999999999999999999999999999999999876655444555555555554


Q ss_pred             HHHhHHH
Q 009980          324 NARRKLR  330 (521)
Q Consensus       324 ~~~~~~~  330 (521)
                      ..+++++
T Consensus       289 ~~~~~~~  295 (307)
T d1a06a_         289 FAKSKWK  295 (307)
T ss_dssp             SCCCTTT
T ss_pred             HHHhhhh
Confidence            4444443

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.2e-63  Score=467.37  Aligned_cols=256  Identities=32%  Similarity=0.568  Sum_probs=232.3

Q ss_pred             ccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEI   88 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   88 (521)
                      .++|++++.||+|+||+||+|+++.  +++.||||++.+.....                         ......+.+|+
T Consensus         5 l~dy~i~~~iG~G~fg~Vy~~~~~~--~~~~vAiK~i~~~~~~~-------------------------~~~~~~~~~E~   57 (263)
T d2j4za1           5 LEDFEIGRPLGKGKFGNVYLAREKQ--SKFILALKVLFKAQLEK-------------------------AGVEHQLRREV   57 (263)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETT--TCCEEEEEEEEHHHHHH-------------------------TTCHHHHHHHH
T ss_pred             hhHeEEEEEEecCCCcEEEEEEECC--CCcEEEEEEEchHHccC-------------------------hHHHHHHHHHH
Confidence            5789999999999999999999998  78999999997543211                         12245688999


Q ss_pred             HHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 009980           89 LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDL  168 (521)
Q Consensus        89 ~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dl  168 (521)
                      .+++++     +||||+++++++.+++.+|+|||||+||+|.+++...+.+++..++.++.||+.||.|||++||+||||
T Consensus        58 ~il~~l-----~hpnIv~~~~~~~~~~~~~ivmEy~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDi  132 (263)
T d2j4za1          58 EIQSHL-----RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDI  132 (263)
T ss_dssp             HHHHTC-----CCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred             HHHHhc-----CCCCCCeEEEEEEECCEEEEEEeecCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeeee
Confidence            999998     999999999999999999999999999999999999899999999999999999999999999999999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCC
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQS  248 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~  248 (521)
                      ||+|||+   +.++.+||+|||+|+..... .....+||+.|+|||++.+.+|+.++|||||||++|+|++|++||.+.+
T Consensus       133 Kp~Nill---~~~~~~kl~DFG~a~~~~~~-~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~  208 (263)
T d2j4za1         133 KPENLLL---GSAGELKIADFGWSVHAPSS-RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT  208 (263)
T ss_dssp             CGGGEEE---CTTSCEEECCCCSCSCCCCC-CCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred             cccccee---cCCCCEeecccceeeecCCC-cccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCC
Confidence            9999999   77889999999999876533 3445689999999999999999999999999999999999999999999


Q ss_pred             cHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccC
Q 009980          249 NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIG  304 (521)
Q Consensus       249 ~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~  304 (521)
                      ..+....+.++.+.++    +.+|+++++||.+||+.||.+|||++|+|+||||+.
T Consensus       209 ~~~~~~~i~~~~~~~p----~~~s~~~~~li~~~L~~dp~~R~t~~eil~hp~~~~  260 (263)
T d2j4za1         209 YQETYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA  260 (263)
T ss_dssp             HHHHHHHHHTTCCCCC----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTCHHHHH
T ss_pred             HHHHHHHHHcCCCCCC----ccCCHHHHHHHHHHccCCHhHCcCHHHHHcCcCcCC
Confidence            9999999998887765    458999999999999999999999999999999974

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-62  Score=464.70  Aligned_cols=262  Identities=29%  Similarity=0.522  Sum_probs=222.9

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      .+.++|++++.||+|+||+||+|+++.  +++.||||++++.....                           ....+.+
T Consensus         2 Pf~~dy~~~~~lG~G~fg~V~~~~~~~--~~~~vAiK~i~~~~~~~---------------------------~~~~~~~   52 (271)
T d1nvra_           2 PFVEDWDLVQTLGEGAYGEVQLAVNRV--TEEAVAVKIVDMKRAVD---------------------------CPENIKK   52 (271)
T ss_dssp             TTTTEEEEEEEEEEETTEEEEEEEETT--TCCEEEEEEEECC----------------------------------CHHH
T ss_pred             CCCcceEEEEEEecCcCeEEEEEEECC--CCCEEEEEEEehhhcch---------------------------HHHHHHH
Confidence            367899999999999999999999998  78999999997543211                           1234789


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHR  166 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~  166 (521)
                      |+.+++++     +||||+++++++.+++.+|||||||+||+|.+++...+.+++.+++.++.||+.||.|||++||+||
T Consensus        53 Ei~~l~~l-----~HpnIv~~~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~~~IiHr  127 (271)
T d1nvra_          53 EICINKML-----NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR  127 (271)
T ss_dssp             HHHHHHTC-----CCTTBCCEEEEEEETTEEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred             HHHHHHhC-----CCCCEeeEeeeeccCceeEEEEeccCCCcHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCccC
Confidence            99999998     9999999999999999999999999999999999888899999999999999999999999999999


Q ss_pred             cCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC---CcccccCCcccccccccccCCC-CchhhhHHHHHHHHHHHhCCC
Q 009980          167 DLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD---PVVGLFGSIDYVSPEALLQDRI-TSKSDMWSLGVILYILLSGYP  242 (521)
Q Consensus       167 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~~ll~g~~  242 (521)
                      ||||+|||+   +.++.+||+|||+|+......   .....+||+.|+|||++.+..+ +.++||||+||++|+|++|++
T Consensus       128 DiKp~NILl---~~~~~~KL~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~  204 (271)
T d1nvra_         128 DIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL  204 (271)
T ss_dssp             CCCGGGEEE---CTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSC
T ss_pred             cccHHHEEE---CCCCCEEEccchhheeeccCCccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCC
Confidence            999999999   777899999999998653222   2345689999999999988776 578999999999999999999


Q ss_pred             CCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCC
Q 009980          243 PFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDS  306 (521)
Q Consensus       243 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~  306 (521)
                      ||...+.............. ....+..+|+++++||.+||+.||.+|||++|+|+||||+...
T Consensus       205 pf~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~l  267 (271)
T d1nvra_         205 PWDQPSDSCQEYSDWKEKKT-YLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPL  267 (271)
T ss_dssp             SCSSSSTTSHHHHHHHTTCT-TSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCC
T ss_pred             CCCCCChHHHHHHHHhcCCC-CCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCcCC
Confidence            99876554333333332222 2234578999999999999999999999999999999997543

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-61  Score=467.08  Aligned_cols=271  Identities=36%  Similarity=0.640  Sum_probs=244.6

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      +++.++|++++.||+|+||+||+|+++.  +++.||||++++......                      ........+.
T Consensus         6 ~~i~d~Y~~~~~lG~G~fg~Vy~~~~~~--~~~~~AvK~i~~~~~~~~----------------------~~~~~~~~~~   61 (293)
T d1jksa_           6 ENVDDYYDTGEELGSGQFAVVKKCREKS--TGLQYAAKFIKKRRTKSS----------------------RRGVSREDIE   61 (293)
T ss_dssp             SCGGGTEEEEEEEEECSSEEEEEEEETT--TCCEEEEEEEEBCSSTTC----------------------SSSBCHHHHH
T ss_pred             CCcccCEEEeEEEecCCCeEEEEEEECC--CCCEEEEEEEEhhhcchh----------------------hhhHHHHHHH
Confidence            5688999999999999999999999988  889999999987544321                      1113356689


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      +|+.+++++     +|||||+++++|.+++.+|||||||+||+|.+++...+.+++..++.++.||+.||.|||++||+|
T Consensus        62 ~E~~il~~l-----~HpnIv~~~~~~~~~~~~~iv~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~~~ivH  136 (293)
T d1jksa_          62 REVSILKEI-----QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH  136 (293)
T ss_dssp             HHHHHHHHC-----CCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             HHHHHHHhC-----CCCCCCcEEEEEEECCEEEEEEEcCCCccccchhccccccchhHHHHHHHHHHHHHHhhhhcceee
Confidence            999999999     999999999999999999999999999999999999889999999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCC-CCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCC
Q 009980          166 RDLKPENCLFLNDR-EDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF  244 (521)
Q Consensus       166 ~dlkp~Nil~~~~~-~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf  244 (521)
                      |||||+|||+..++ ....+||+|||+|.............||+.|+|||++.+..|+.++||||+||++|+|++|++||
T Consensus       137 rDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf  216 (293)
T d1jksa_         137 FDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF  216 (293)
T ss_dssp             CCCSGGGEEESCSSSSSCCEEECCCTTCEECTTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred             cccccceEEEecCCCcccceEecchhhhhhcCCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCC
Confidence            99999999994332 22369999999998876666666778999999999999999999999999999999999999999


Q ss_pred             CCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCC
Q 009980          245 IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGD  305 (521)
Q Consensus       245 ~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~  305 (521)
                      .+.+..+....+..+...++...++.+|+++++||.+||..||.+|||++++|+||||+..
T Consensus       217 ~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~  277 (293)
T d1jksa_         217 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPK  277 (293)
T ss_dssp             CCSSHHHHHHHHHTTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTCC-
T ss_pred             CCCCHHHHHHHHHhcCCCCCchhcCCCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCC
Confidence            9999999999999999998888889999999999999999999999999999999999753

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=2.7e-61  Score=473.42  Aligned_cols=265  Identities=32%  Similarity=0.599  Sum_probs=240.6

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      ..+.++|++++.||+|+||+||+|+++.  +++.||||++.+...                            .....+.
T Consensus        22 ~~il~~Y~i~~~lG~G~fg~Vy~~~~~~--~g~~vAvK~i~~~~~----------------------------~~~~~~~   71 (350)
T d1koaa2          22 DHVLDHYDIHEELGTGAFGVVHRVTERA--TGNNFAAKFVMTPHE----------------------------SDKETVR   71 (350)
T ss_dssp             SCGGGTEEEEEEEEEETTEEEEEEEETT--TTEEEEEEEECCCSH----------------------------HHHHHHH
T ss_pred             CCCccCeEEEEEEecCcCeEEEEEEECC--CCCEEEEEEEcccch----------------------------hhHHHHH
Confidence            3466899999999999999999999988  889999999864211                            2245688


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIV-AQERYMEVGAAAVIRQIAEGLAALHQANIV  164 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~-~~~~~~~~~~~~i~~qil~al~~lH~~~i~  164 (521)
                      +|+.+++++     +|||||++++++.+++.+|||||||+||+|.+++. ..+++++.+++.|+.||+.||.|||++||+
T Consensus        72 ~E~~il~~l-----~HpnIv~~~~~~~~~~~~~ivmE~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~ii  146 (350)
T d1koaa2          72 KEIQTMSVL-----RHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYV  146 (350)
T ss_dssp             HHHHHHHHT-----CCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHhC-----CCCCCCcEEEEEEECCEEEEEEEcCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCe
Confidence            999999999     99999999999999999999999999999999985 456799999999999999999999999999


Q ss_pred             eccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCC
Q 009980          165 HRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF  244 (521)
Q Consensus       165 H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf  244 (521)
                      ||||||+|||+.. +.++.+||+|||+|+...........+||+.|||||++.+.+|+.++|||||||++|+|++|++||
T Consensus       147 HrDiKp~NIll~~-~~~~~vkL~DFG~a~~~~~~~~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf  225 (350)
T d1koaa2         147 HLDLKPENIMFTT-KRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPF  225 (350)
T ss_dssp             CCCCCGGGEEESS-TTSCCEEECCCTTCEECCTTSCEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSS
T ss_pred             eeeechhHeeecc-CCCCeEEEeecchheecccccccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCC
Confidence            9999999999943 235789999999998877666666778999999999999999999999999999999999999999


Q ss_pred             CCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCC
Q 009980          245 IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDS  306 (521)
Q Consensus       245 ~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~  306 (521)
                      .+.+..+....+..+...++...+..+|+++++||.+||..||.+|||++|+|+||||+...
T Consensus       226 ~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hp~~~~~~  287 (350)
T d1koaa2         226 GGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGN  287 (350)
T ss_dssp             CCSSHHHHHHHHHHTCCCSCCGGGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHHSTTTSCTT
T ss_pred             CCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCC
Confidence            99999999999999998888888889999999999999999999999999999999998654

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-60  Score=457.30  Aligned_cols=257  Identities=26%  Similarity=0.443  Sum_probs=226.4

Q ss_pred             cccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      ..++|++.+.||+|+||+||+|+++.  +++.||||++.+...                            .....+.+|
T Consensus        18 p~~~Y~~~~~iG~G~fg~Vy~a~~~~--~~~~vAvK~~~~~~~----------------------------~~~~~~~~E   67 (293)
T d1yhwa1          18 PKKKYTRFEKIGQGASGTVYTAMDVA--TGQEVAIRQMNLQQQ----------------------------PKKELIINE   67 (293)
T ss_dssp             TTTTBCSCEECCCSSSCEEEEEEBTT--TCCEEEEEEEEGGGC----------------------------SCHHHHHHH
T ss_pred             cccccEEEEEEecCcCcEEEEEEECC--CCCEEEEEEEecccC----------------------------hHHHHHHHH
Confidence            45689999999999999999999988  789999999975322                            123568899


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecc
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRD  167 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~d  167 (521)
                      +.+++++     +|||||+++++|.+++.+|||||||+||+|.+++.. +.+++.+++.++.||+.||.|||++||+|||
T Consensus        68 ~~il~~l-----~HpnIv~~~~~~~~~~~~~ivmEy~~gg~L~~~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrD  141 (293)
T d1yhwa1          68 ILVMREN-----KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRD  141 (293)
T ss_dssp             HHHHHHC-----CCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             HHHHHhC-----CCCCEeeEeEEEEECCEEEEEEEecCCCcHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCCcccC
Confidence            9999998     999999999999999999999999999999987765 5799999999999999999999999999999


Q ss_pred             CCCCcEEEeeCCCCCCEEEeecCCCccCCCCC-CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCC
Q 009980          168 LKPENCLFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIA  246 (521)
Q Consensus       168 lkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~  246 (521)
                      |||+|||+   +.++.+||+|||+|+...... .....+||+.|+|||++.+..|+.++||||+||++|+|++|++||.+
T Consensus       142 iKp~NILl---~~~~~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~  218 (293)
T d1yhwa1         142 IKSDNILL---GMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLN  218 (293)
T ss_dssp             CSGGGEEE---CTTCCEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             CcHHHeEE---CCCCcEeeccchhheeeccccccccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCC
Confidence            99999999   677899999999998754332 34556799999999999999999999999999999999999999998


Q ss_pred             CCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccC
Q 009980          247 QSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIG  304 (521)
Q Consensus       247 ~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~  304 (521)
                      .+..+....+...... ....+..+|+++++||.+||..||.+|||+.|+|+||||+.
T Consensus       219 ~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~Hp~~~~  275 (293)
T d1yhwa1         219 ENPLRALYLIATNGTP-ELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKI  275 (293)
T ss_dssp             SCHHHHHHHHHHHCSC-CCSSGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTTCGGGGG
T ss_pred             CCHHHHHHHHHhCCCC-CCCCcccCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhCC
Confidence            8877766666554332 12334679999999999999999999999999999999974

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=4.7e-61  Score=472.06  Aligned_cols=264  Identities=34%  Similarity=0.622  Sum_probs=239.9

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      .+.++|++++.||+|+||+||+|+++.  +++.||||++++...                            .....+.+
T Consensus        26 ~~~d~Y~i~~~lG~G~fg~V~~a~~~~--~~~~vAiK~i~~~~~----------------------------~~~~~~~~   75 (352)
T d1koba_          26 SVYDYYDILEELGSGAFGVVHRCVEKA--TGRVFVAKFINTPYP----------------------------LDKYTVKN   75 (352)
T ss_dssp             CGGGTEEEEEEEEEETTEEEEEEEETT--TCCEEEEEEEECCSH----------------------------HHHHHHHH
T ss_pred             CcccceEEEEEEecCCCeEEEEEEECC--CCCEEEEEEECCcch----------------------------hHHHHHHH
Confidence            456889999999999999999999988  789999999875221                            22456789


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE-RYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      |+.+++++     +|||||+++++|.+++.+|||||||+||+|.+.+...+ ++++.+++.|+.||+.||.|||++||+|
T Consensus        76 Ei~il~~l-----~HpnIv~~~~~~~~~~~~~ivmE~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiH  150 (352)
T d1koba_          76 EISIMNQL-----HHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVH  150 (352)
T ss_dssp             HHHHHTTC-----CSTTBCCEEEEEECSSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             HHHHHHhC-----CCCCCCcEEEEEEECCEEEEEEEcCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence            99999998     99999999999999999999999999999999876544 6999999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCC
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFI  245 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~  245 (521)
                      |||||+|||+.. ...+.+||+|||+|+............||+.|+|||++.+..|+.++|||||||++|+|++|.+||.
T Consensus       151 RDiKp~NILl~~-~~~~~vkL~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~  229 (352)
T d1koba_         151 LDIKPENIMCET-KKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFA  229 (352)
T ss_dssp             CCCCGGGEEESS-TTCCCEEECCCTTCEECCTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSC
T ss_pred             cccccccccccc-cCCCeEEEeecccceecCCCCceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCC
Confidence            999999999932 2567899999999998776666667789999999999999999999999999999999999999999


Q ss_pred             CCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCC
Q 009980          246 AQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDS  306 (521)
Q Consensus       246 ~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~  306 (521)
                      +.+..+....+..+.+.++...+..+|+++++||.+||++||.+|||+.|+|+||||++..
T Consensus       230 ~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~Hp~~~~~~  290 (352)
T d1koba_         230 GEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDH  290 (352)
T ss_dssp             CSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSCC
T ss_pred             CCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhCCCc
Confidence            9999999999999999888888889999999999999999999999999999999998653

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.1e-61  Score=460.40  Aligned_cols=262  Identities=31%  Similarity=0.503  Sum_probs=231.3

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      ....++|++++.||+|+||+||+|+++.  +++.||||++.+.....                         ......+.
T Consensus         4 ~~~p~dy~i~~~lG~G~fg~Vy~a~~~~--~~~~vAvK~i~~~~~~~-------------------------~~~~~~~~   56 (288)
T d1uu3a_           4 KKRPEDFKFGKILGEGSFSTVVLARELA--TSREYAIKILEKRHIIK-------------------------ENKVPYVT   56 (288)
T ss_dssp             CCCGGGEEEEEEEEECSSCEEEEEEETT--TCCEEEEEEEEHHHHHH-------------------------TTCHHHHH
T ss_pred             CCCCCCCEEEEEEeeCCCeEEEEEEECC--CCCEEEEEEEehHHccC-------------------------HHHHHHHH
Confidence            3445789999999999999999999988  78999999997533211                         11235588


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      +|+.+++++     +||||+++++++.+++.+|+|||||+||+|.+++...+.+++..++.++.|++.||.|||++||+|
T Consensus        57 ~E~~il~~l-----~HpnIv~l~~~~~~~~~~~ivmEy~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiH  131 (288)
T d1uu3a_          57 RERDVMSRL-----DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIH  131 (288)
T ss_dssp             HHHHHHHHC-----CSTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             HHHHHHHHc-----CCCCeeEEEEEEEECCEEEEEEEccCCCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhccccEEc
Confidence            999999999     999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC---CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCC
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD---PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYP  242 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~  242 (521)
                      |||||+|||+   +.++.+||+|||+|+......   .....+||+.|+|||++.+..|+.++||||+||++|+|++|++
T Consensus       132 rDiKp~NIll---~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~  208 (288)
T d1uu3a_         132 RDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP  208 (288)
T ss_dssp             SCCSGGGEEE---CTTSCEEECCCTTCEECC----------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSC
T ss_pred             CcCCcccccc---CCCceEEecccccceecccCCcccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCC
Confidence            9999999999   778899999999998654322   2345679999999999999999999999999999999999999


Q ss_pred             CCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHH------HHcCCcccCCC
Q 009980          243 PFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQE------LLNHPWVIGDS  306 (521)
Q Consensus       243 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~------~l~h~~~~~~~  306 (521)
                      ||.+.+..+....+.++.+.++    ..+|+++++||.+||+.||.+|||++|      +++||||.+-.
T Consensus       209 Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~li~~~L~~dP~~R~t~~e~~~~~~i~~Hpff~~i~  274 (288)
T d1uu3a_         209 PFRAGNEYLIFQKIIKLEYDFP----EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVT  274 (288)
T ss_dssp             SSCCSSHHHHHHHHHTTCCCCC----TTCCHHHHHHHHTTSCSSGGGSTTSGGGTCHHHHHTSGGGTTCC
T ss_pred             CCCCcCHHHHHHHHHcCCCCCC----ccCCHHHHHHHHHHccCCHhHCcCHHHHcCCHHHHcCCccCCCC
Confidence            9999999999999999887765    468999999999999999999999987      58899997644

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=4.2e-60  Score=450.27  Aligned_cols=269  Identities=36%  Similarity=0.614  Sum_probs=239.7

Q ss_pred             cccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      |.++|++.+.||+|+||+||+|+++.  +++.||||++++......                   ...........+.+|
T Consensus         1 f~~~y~~~~~iG~G~~g~V~~~~~~~--~~~~~AvK~i~~~~~~~~-------------------~~~~~~~~~~~~~~E   59 (277)
T d1phka_           1 FYENYEPKEILGRGVSSVVRRCIHKP--TCKEYAVKIIDVTGGGSF-------------------SAEEVQELREATLKE   59 (277)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETT--TTEEEEEEEEETTCSTTC-------------------CHHHHHHHHHHHHHH
T ss_pred             CcccCEEceEEecCcCeEEEEEEECC--CCCEEEEEEEecccccch-------------------hHHHHHHHHHHHHHH
Confidence            57899999999999999999999988  789999999987543321                   001111223457889


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecc
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRD  167 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~d  167 (521)
                      +.+++++    ..||||+++++++.+++.+|||||||+||+|.+++..++++++..++.++.||+.||.|||++||+|||
T Consensus        60 ~~~l~~l----~~hpnIv~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~ivHrD  135 (277)
T d1phka_          60 VDILRKV----SGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRD  135 (277)
T ss_dssp             HHHHHHH----TTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             HHHHHHh----cCCCCeEEEEeecccCcceEEEEEcCCCchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCcccc
Confidence            9999999    249999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCccccccccccc------CCCCchhhhHHHHHHHHHHHhCC
Q 009980          168 LKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQ------DRITSKSDMWSLGVILYILLSGY  241 (521)
Q Consensus       168 lkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~~ll~g~  241 (521)
                      |||+|||+   +.++.+||+|||+|+...........+||+.|+|||.+.+      ..++.++||||+||++|+|++|+
T Consensus       136 lkp~Nill---~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~  212 (277)
T d1phka_         136 LKPENILL---DDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGS  212 (277)
T ss_dssp             CSGGGEEE---CTTCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSS
T ss_pred             cccceEEE---cCCCCeEEccchheeEccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCC
Confidence            99999999   7889999999999987766555566789999999999853      35788999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccC
Q 009980          242 PPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIG  304 (521)
Q Consensus       242 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~  304 (521)
                      +||.+.+.......+..+...++.+.+.++|+++++||.+||+.||.+|||++|+|+||||+.
T Consensus       213 ~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h~~~~~  275 (277)
T d1phka_         213 PPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ  275 (277)
T ss_dssp             CSSCCSSHHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCT
T ss_pred             CCCCCCCHHHHHHHHHhCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHHHH
Confidence            999999999999999999888888888899999999999999999999999999999999975

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-60  Score=456.10  Aligned_cols=260  Identities=27%  Similarity=0.407  Sum_probs=227.0

Q ss_pred             cccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      ..+.|++++.||+|+||+||+|+++.  +++.||||++++...                            .....+.+|
T Consensus        10 p~d~Y~i~~~iG~G~fg~Vy~~~~~~--~~~~vAvK~i~~~~~----------------------------~~~~~~~~E   59 (288)
T d2jfla1          10 PEDFWEIIGELGDGAFGKVYKAQNKE--TSVLAAAKVIDTKSE----------------------------EELEDYMVE   59 (288)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETT--TCCEEEEEEEECSSS----------------------------GGGGGTHHH
T ss_pred             cccCeEEeEEEeeCCCcEEEEEEECC--CCeEEEEEEECcCCH----------------------------HHHHHHHHH
Confidence            35689999999999999999999998  788999999975321                            112347899


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQANIVHR  166 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~al~~lH~~~i~H~  166 (521)
                      +.+++++     +|||||++++++.+++.+|||||||+||+|.+++.. .+.+++.+++.++.||+.||.|||++||+||
T Consensus        60 ~~il~~l-----~HpnIv~l~~~~~~~~~~~lvmEy~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHr  134 (288)
T d2jfla1          60 IDILASC-----DHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHR  134 (288)
T ss_dssp             HHHHHHC-----CCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred             HHHHHhC-----CCCCCCeEEEEEeeCCeEEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEe
Confidence            9999998     999999999999999999999999999999998765 4579999999999999999999999999999


Q ss_pred             cCCCCcEEEeeCCCCCCEEEeecCCCccCCCC-CCcccccCCcccccccccc-----cCCCCchhhhHHHHHHHHHHHhC
Q 009980          167 DLKPENCLFLNDREDSPLKIMDFGLSSVEGYT-DPVVGLFGSIDYVSPEALL-----QDRITSKSDMWSLGVILYILLSG  240 (521)
Q Consensus       167 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslG~il~~ll~g  240 (521)
                      ||||+|||+   +.++.+||+|||+|+..... ......+||+.|+|||++.     ...|+.++||||+||++|+|++|
T Consensus       135 DiKp~NIll---~~~~~~Kl~DFG~a~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg  211 (288)
T d2jfla1         135 DLKAGNILF---TLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEI  211 (288)
T ss_dssp             CCSGGGEEE---CTTSCEEECCCTTCEECHHHHHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHS
T ss_pred             ecChhheeE---CCCCCEEEEechhhhccCCCcccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhC
Confidence            999999999   77889999999999754322 1233567999999999984     45689999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCC
Q 009980          241 YPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDS  306 (521)
Q Consensus       241 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~  306 (521)
                      ++||.+.+..+....+..+..+.. ..+..+|+++++||.+||+.||.+|||++|+|+||||+...
T Consensus       212 ~~Pf~~~~~~~~~~~i~~~~~~~~-~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~hp~~~~~~  276 (288)
T d2jfla1         212 EPPHHELNPMRVLLKIAKSEPPTL-AQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDS  276 (288)
T ss_dssp             SCTTTTSCGGGHHHHHHHSCCCCC-SSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGCCCC
T ss_pred             CCCCCCCCHHHHHHHHHcCCCCCC-CccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCC
Confidence            999999999888888888765433 23467999999999999999999999999999999997543

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-60  Score=464.45  Aligned_cols=262  Identities=32%  Similarity=0.590  Sum_probs=240.1

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      .+.++|++++.||+|+||+||+|+++.  +++.||||++++..                             .....+.+
T Consensus         2 ~~~~rY~i~~~lG~G~fg~Vy~~~~~~--~~~~~AiK~i~~~~-----------------------------~~~~~~~~   50 (321)
T d1tkia_           2 ELYEKYMIAEDLGRGEFGIVHRCVETS--SKKTYMAKFVKVKG-----------------------------TDQVLVKK   50 (321)
T ss_dssp             CCTTTEEEEEEEEECSSEEEEEEEETT--TTEEEEEEEECCCT-----------------------------HHHHHHHH
T ss_pred             CCccceEEEEEEecCCCeEEEEEEECC--CCcEEEEEEEcCCc-----------------------------ccHHHHHH
Confidence            477899999999999999999999998  78899999996522                             22345789


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE-RYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      |+.+|+++     +|||||+++++|++++.+|||||||+||+|.+++...+ .+++.+++.|+.||+.||.|||++||+|
T Consensus        51 Ei~il~~l-----~HpnIv~~~~~~~~~~~~~lvmE~~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~iiH  125 (321)
T d1tkia_          51 EISILNIA-----RHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGH  125 (321)
T ss_dssp             HHHHHHHS-----CCTTBCCEEEEEEETTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             HHHHHHhC-----CCCCCCeEEEEEEECCEEEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence            99999998     99999999999999999999999999999999998665 7999999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCC
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFI  245 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~  245 (521)
                      |||||+|||+.. +....+||+|||+++...........+||+.|+|||.+.+..|+.++||||+||++|+|++|.+||.
T Consensus       126 rDlKp~NIll~~-~~~~~ikl~DFG~~~~~~~~~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~  204 (321)
T d1tkia_         126 FDIRPENIIYQT-RRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFL  204 (321)
T ss_dssp             CCCCGGGEEESS-SSCCCEEECCCTTCEECCTTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTC
T ss_pred             ccccccceeecC-CCceEEEEcccchhhccccCCcccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCC
Confidence            999999999943 2456899999999987766555666789999999999999999999999999999999999999999


Q ss_pred             CCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCC
Q 009980          246 AQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGD  305 (521)
Q Consensus       246 ~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~  305 (521)
                      +.+..+....+..+.+.++...|+.+|+++++||.+||..||.+|||+.|+|+||||++.
T Consensus       205 ~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~~  264 (321)
T d1tkia_         205 AETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQK  264 (321)
T ss_dssp             CSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSC
T ss_pred             CCCHHHHHHHHHhCCCCCChhhccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccC
Confidence            999999999999999999999999999999999999999999999999999999999754

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.9e-60  Score=461.63  Aligned_cols=258  Identities=28%  Similarity=0.465  Sum_probs=233.8

Q ss_pred             ccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEI   88 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   88 (521)
                      .++|++++.||+|+||+||+|+++.  +++.||||++++.....                         ......+.+|+
T Consensus         4 l~dy~~~~~lG~G~fg~V~~~~~~~--~~~~~AiK~i~k~~~~~-------------------------~~~~~~~~~E~   56 (337)
T d1o6la_           4 MNDFDYLKLLGKGTFGKVILVREKA--TGRYYAMKILRKEVIIA-------------------------KDEVAHTVTES   56 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETT--TCCEEEEEEEEHHHHHH-------------------------TTCHHHHHHHH
T ss_pred             hHhcEEEEEEecCcCeEEEEEEECC--CCCEEEEEEEchhhccC-------------------------HHHHHHHHHHH
Confidence            4689999999999999999999998  88999999998643211                         11235578899


Q ss_pred             HHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 009980           89 LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDL  168 (521)
Q Consensus        89 ~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dl  168 (521)
                      .+|+++     +||||++++++|++++.+|+|||||+||+|.+++...+.++|..++.++.||+.||.|||++||+||||
T Consensus        57 ~il~~l-----~hp~Iv~l~~~~~~~~~~~iv~ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~~iiHRDl  131 (337)
T d1o6la_          57 RVLQNT-----RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDI  131 (337)
T ss_dssp             HHHHSC-----CCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCC
T ss_pred             HHHHhC-----CCCCEEEEEeeeccccccccceeccCCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhhhcCcccccc
Confidence            999998     999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCccCCC-CCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSSVEGY-TDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQ  247 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~  247 (521)
                      ||+|||+   +.++.+||+|||+|+.... .......+||+.|+|||++.+.+|+.++|||||||++|+|++|++||.+.
T Consensus       132 KP~NILl---~~~g~vkl~DFG~a~~~~~~~~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~  208 (337)
T d1o6la_         132 KLENLML---DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ  208 (337)
T ss_dssp             CGGGEEE---CTTSCEEECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             CHHHeEe---cCCCCEEEeecccccccccCCcccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCc
Confidence            9999999   7789999999999986543 34455678999999999999999999999999999999999999999999


Q ss_pred             CcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCC-----HHHHHcCCcccCC
Q 009980          248 SNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPS-----AQELLNHPWVIGD  305 (521)
Q Consensus       248 ~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t-----~~~~l~h~~~~~~  305 (521)
                      +..++...+..+.+.++    +.+|+++++||.+||++||.+||+     ++++++||||.+.
T Consensus       209 ~~~~~~~~i~~~~~~~p----~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~Hp~f~~i  267 (337)
T d1o6la_         209 DHERLFELILMEEIRFP----RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI  267 (337)
T ss_dssp             SHHHHHHHHHHCCCCCC----TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred             CHHHHHHHHhcCCCCCC----ccCCHHHHHHHHhhccCCchhhcccccccHHHHHcCcccccC
Confidence            99999999999887765    568999999999999999999994     9999999999753

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-60  Score=449.90  Aligned_cols=255  Identities=29%  Similarity=0.506  Sum_probs=214.0

Q ss_pred             ccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEI   88 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   88 (521)
                      .++|++.+.||+|+||+||+|+++.  +++.||||++.+....                          ......+.+|+
T Consensus         3 ~edy~~~~~iG~G~fg~Vy~~~~~~--~~~~vAvK~i~~~~~~--------------------------~~~~~~~~~E~   54 (269)
T d2java1           3 AEDYEVLYTIGTGSYGRCQKIRRKS--DGKILVWKELDYGSMT--------------------------EAEKQMLVSEV   54 (269)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETT--TCCEEEEEEECCTTSC--------------------------HHHHHHHHHHH
T ss_pred             chhCEEeEEEecCCCeEEEEEEECC--CCCEEEEEEEChhhCC--------------------------HHHHHHHHHHH
Confidence            4789999999999999999999998  7889999999754321                          12245588999


Q ss_pred             HHHHHHhhccCCCCCccceeEEEEe--CCeEEEEEeccCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 009980           89 LVMRKIVENVSPHPNVIDLYDVYED--QNGVHLILELCSGGELFDRIVA----QERYMEVGAAAVIRQIAEGLAALHQAN  162 (521)
Q Consensus        89 ~~l~~l~~~~~~hpniv~~~~~~~~--~~~~~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qil~al~~lH~~~  162 (521)
                      .+++++     +|||||++++++.+  ++.+|||||||+||+|.+++.+    .+.+++..++.++.||+.||.|||++|
T Consensus        55 ~il~~l-----~HpnIv~~~~~~~~~~~~~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~  129 (269)
T d2java1          55 NLLREL-----KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS  129 (269)
T ss_dssp             HHTTSC-----CCTTBCCEEEEEEC----CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHC-----CCCCEeeEEEEEEeCCCCEEEEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhc
Confidence            999988     99999999999864  5679999999999999998864    467999999999999999999999987


Q ss_pred             -----CeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC-CcccccCCcccccccccccCCCCchhhhHHHHHHHHH
Q 009980          163 -----IVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYI  236 (521)
Q Consensus       163 -----i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~  236 (521)
                           |+||||||+|||+   +.++.+||+|||+|+...... .....+||+.|+|||++.+.+|+.++|||||||++|+
T Consensus       130 ~~~~~IiHrDiKp~NIll---~~~~~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilye  206 (269)
T d2java1         130 DGGHTVLHRDLKPANVFL---DGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYE  206 (269)
T ss_dssp             C---------CCGGGEEE---CTTSCEEECCHHHHHHC-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEeCcCchhhcCc---CCCCcEEEeeccceeecccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHH
Confidence                 9999999999999   778899999999998754332 2345689999999999999999999999999999999


Q ss_pred             HHhCCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcc
Q 009980          237 LLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV  302 (521)
Q Consensus       237 ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~  302 (521)
                      |++|++||.+.+..+....+..+.....   +..+|+++++||.+||+.||.+|||++|+|+|||+
T Consensus       207 l~tg~~Pf~~~~~~~~~~~i~~~~~~~~---~~~~s~~l~~li~~~L~~dp~~Rps~~ell~hp~i  269 (269)
T d2java1         207 LCALMPPFTAFSQKELAGKIREGKFRRI---PYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI  269 (269)
T ss_dssp             HHHSSCSCCCSSHHHHHHHHHHTCCCCC---CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred             HhhCCCCCCCCCHHHHHHHHHcCCCCCC---CcccCHHHHHHHHHHcCCChhHCcCHHHHHhCCcC
Confidence            9999999999999988888888776533   25689999999999999999999999999999996

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.4e-59  Score=441.58  Aligned_cols=256  Identities=23%  Similarity=0.372  Sum_probs=217.1

Q ss_pred             ccce-eecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            9 TDEY-EVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         9 ~~~Y-~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      .++| ++.+.||+|+||+||+|+++.  +++.||+|.+......                          ......+.+|
T Consensus         7 ~gry~~~~~~iG~G~fg~Vy~~~~~~--~~~~va~K~i~~~~~~--------------------------~~~~~~~~~E   58 (270)
T d1t4ha_           7 DGRFLKFDIEIGRGSFKTVYKGLDTE--TTVEVAWCELQDRKLT--------------------------KSERQRFKEE   58 (270)
T ss_dssp             TSCEEEEEEEEEECSSEEEEEEEETT--TCCEEEEEEEEGGGSC--------------------------HHHHHHHHHH
T ss_pred             CCCEEEeeeEEecCcCcEEEEEEECC--CCeEEEEEEEchhhCC--------------------------HHHHHHHHHH
Confidence            3455 788899999999999999987  7889999998753321                          1223468899


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEe----CCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC-
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYED----QNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQAN-  162 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~----~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~-  162 (521)
                      +++++++     +|||||+++++|++    +..+|+|||||+||+|.+++.+.+.+++..+..++.||+.||.|||++| 
T Consensus        59 ~~il~~l-----~HpnIv~~~~~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~  133 (270)
T d1t4ha_          59 AEMLKGL-----QHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTP  133 (270)
T ss_dssp             HHHHTTC-----CCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSS
T ss_pred             HHHHHhC-----CCCCeeeEEEEEeeccccCCEEEEEEeCCCCCcHHHHHhccccccHHHHHHHHHHHHHHHHHHHHCCC
Confidence            9999998     99999999999976    4568999999999999999999899999999999999999999999999 


Q ss_pred             -CeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCC
Q 009980          163 -IVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGY  241 (521)
Q Consensus       163 -i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~  241 (521)
                       |+||||||+|||+.  +.++.+||+|||+|+.... ......+||+.|+|||++.+ +|+.++||||+||++|+|++|+
T Consensus       134 ~IiHrDiKp~NILl~--~~~~~~Kl~DFGla~~~~~-~~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~  209 (270)
T d1t4ha_         134 PIIHRDLKCDNIFIT--GPTGSVKIGDLGLATLKRA-SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSE  209 (270)
T ss_dssp             CCCCSCCCGGGEEES--STTSCEEECCTTGGGGCCT-TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSS
T ss_pred             CEEeCCcChhhceee--CCCCCEEEeecCcceeccC-CccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCC
Confidence             99999999999992  2467899999999986443 33456689999999999865 6999999999999999999999


Q ss_pred             CCCCCCCcH-HHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCccc
Q 009980          242 PPFIAQSNR-QKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVI  303 (521)
Q Consensus       242 ~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~  303 (521)
                      +||.+.... +..+.+..+..  +...+..+++++++||.+||+.||++|||++|+|+||||+
T Consensus       210 ~Pf~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~Hp~fk  270 (270)
T d1t4ha_         210 YPYSECQNAAQIYRRVTSGVK--PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQ  270 (270)
T ss_dssp             CTTTTCSSHHHHHHHHTTTCC--CGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC
T ss_pred             CCCCCcccHHHHHHHHHcCCC--CcccCccCCHHHHHHHHHHccCCHhHCcCHHHHhCCcccC
Confidence            999776544 44455554433  2334467899999999999999999999999999999995

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-59  Score=458.00  Aligned_cols=265  Identities=33%  Similarity=0.624  Sum_probs=228.9

Q ss_pred             cccccccceeecc-cccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHH
Q 009980            4 ETRKLTDEYEVTD-ILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDA   82 (521)
Q Consensus         4 ~~~~~~~~Y~~~~-~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (521)
                      ....+.++|++.+ .||+|+||+||+|+++.  +++.||||++++                                 ..
T Consensus         5 ~~~~i~~~y~i~~~~lG~G~fg~Vy~a~~~~--~~~~vAiK~i~~---------------------------------~~   49 (335)
T d2ozaa1           5 KKNAIIDDYKVTSQVLGLGINGKVLQIFNKR--TQEKFALKMLQD---------------------------------CP   49 (335)
T ss_dssp             BCSCGGGTEEEEEEEEEECSSCEEEEEEETT--TCCEEEEEEEEC---------------------------------SH
T ss_pred             CCCCcccCEEEeeEEeeeccCeEEEEEEECC--CCCEEEEEEECC---------------------------------cH
Confidence            3456788999875 69999999999999988  789999999864                                 13


Q ss_pred             HHHHHHHHHHHHhhccCCCCCccceeEEEEe----CCeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHH
Q 009980           83 LLTNEILVMRKIVENVSPHPNVIDLYDVYED----QNGVHLILELCSGGELFDRIVAQ--ERYMEVGAAAVIRQIAEGLA  156 (521)
Q Consensus        83 ~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~----~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~al~  156 (521)
                      .+.+|+.++.++    .+|||||+++++|++    ...+|||||||+||+|.+++...  ..+++.+++.|+.||+.||+
T Consensus        50 ~~~~E~~~~~~~----~~hpnIv~l~~~~~~~~~~~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~  125 (335)
T d2ozaa1          50 KARREVELHWRA----SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ  125 (335)
T ss_dssp             HHHHHHHHHHHH----TTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHh----cCCCCCCeEEEEEeecccCCCEEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHH
Confidence            467899887665    389999999999976    46799999999999999999874  46999999999999999999


Q ss_pred             HHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHH
Q 009980          157 ALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYI  236 (521)
Q Consensus       157 ~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~  236 (521)
                      |||++||+||||||+|||+......+.+||+|||+|+...........+||+.|+|||++.+..|+.++|||||||++|+
T Consensus       126 ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~  205 (335)
T d2ozaa1         126 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYI  205 (335)
T ss_dssp             HHHHTTEECCCCSGGGEEESCSSTTCCEEECCCTTCEECCCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHH
T ss_pred             HHHHcCCccccccccccccccccccccccccccceeeeccCCCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHH
Confidence            99999999999999999996655677899999999987766666667789999999999999999999999999999999


Q ss_pred             HHhCCCCCCCCCcHHHH----HHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCCC
Q 009980          237 LLSGYPPFIAQSNRQKQ----QMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSA  307 (521)
Q Consensus       237 ll~g~~pf~~~~~~~~~----~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~~  307 (521)
                      |+||++||.+.+.....    ..+..+.+.++.+.+..+|+++++||.+||+.||++|||+.++|+||||.....
T Consensus       206 lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~~~  280 (335)
T d2ozaa1         206 LLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTK  280 (335)
T ss_dssp             HTTSSCSCEETTCC--------CCCSCSSSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHSHHHHTTTS
T ss_pred             HhhCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHhhCCCC
Confidence            99999999887655443    334456667777778889999999999999999999999999999999975543

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.1e-60  Score=460.97  Aligned_cols=263  Identities=22%  Similarity=0.331  Sum_probs=219.0

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      +...++|++++.||+|+||+||+|+++.  +++.||+|++++....                           .....+.
T Consensus         2 el~~d~y~~~~~iG~G~fg~V~~~~~~~--~~~~vAiK~i~~~~~~---------------------------~~~~~~~   52 (322)
T d1s9ja_           2 ELKDDDFEKISELGAGNGGVVFKVSHKP--SGLVMARKLIHLEIKP---------------------------AIRNQII   52 (322)
T ss_dssp             CCCGGGEEEEEEEECCSSCCEEEEEETT--TTEEEEEEEEECCCCT---------------------------THHHHHH
T ss_pred             CCCccCCEEEEEEecCCCeEEEEEEECC--CCcEEEEEEEChhhCH---------------------------HHHHHHH
Confidence            3457899999999999999999999988  8899999999753211                           2235688


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CCe
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQA-NIV  164 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~-~i~  164 (521)
                      +|+.+|+++     +|||||+++++|.+++.+|||||||+||+|.+++.+.+.+++..++.++.||+.||.|||++ ||+
T Consensus        53 ~Ei~il~~l-----~HpnIv~l~~~~~~~~~~~iVmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~~~Ii  127 (322)
T d1s9ja_          53 RELQVLHEC-----NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIM  127 (322)
T ss_dssp             HHGGGGGGC-----CCTTBCCEEEEEECSSEEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred             HHHHHHHhC-----CCCCCCcEEEEEEECCEEEEEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCEE
Confidence            999999998     99999999999999999999999999999999999989999999999999999999999975 999


Q ss_pred             eccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCC
Q 009980          165 HRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPF  244 (521)
Q Consensus       165 H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf  244 (521)
                      ||||||+|||+   +.++.+||+|||+|+.... ....+.+||+.|+|||++.+.+|+.++||||+||++|+|++|+.||
T Consensus       128 HRDiKP~NILl---~~~~~vkl~DFGla~~~~~-~~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf  203 (322)
T d1s9ja_         128 HRDVKPSNILV---NSRGEIKLCDFGVSGQLID-SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI  203 (322)
T ss_dssp             CSCCSGGGEEE---CTTCCEEECCCCCCHHHHH-HTC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCS
T ss_pred             ccccCHHHeeE---CCCCCEEEeeCCCccccCC-CccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCC
Confidence            99999999999   7788999999999986432 2234568999999999999999999999999999999999999999


Q ss_pred             CCCCcHHHHHHHHc---CC-------------------------------------CCCchhhhhccCHHHHHHHHHhcc
Q 009980          245 IAQSNRQKQQMIMA---GE-------------------------------------FSFYEQTWKNISSSAKQLISSLLT  284 (521)
Q Consensus       245 ~~~~~~~~~~~i~~---~~-------------------------------------~~~~~~~~~~~s~~~~~li~~~l~  284 (521)
                      .+.+..+.......   +.                                     ..++......+|+++++||.+||.
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~  283 (322)
T d1s9ja_         204 PPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLI  283 (322)
T ss_dssp             SCCCTTHHHHHC------------------------------CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTC
T ss_pred             CCCCHHHHHHHHHHHhcCCcccCCcccccccccccccccccccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcC
Confidence            87654432111000   00                                     000000112368999999999999


Q ss_pred             CCCCCCCCHHHHHcCCcccCCC
Q 009980          285 VDPNRRPSAQELLNHPWVIGDS  306 (521)
Q Consensus       285 ~dp~~R~t~~~~l~h~~~~~~~  306 (521)
                      .||.+|||++|+|+||||++..
T Consensus       284 ~dP~~R~ta~e~L~Hpf~~~~~  305 (322)
T d1s9ja_         284 KNPAERADLKQLMVHAFIKRSD  305 (322)
T ss_dssp             SSTTTSCCHHHHHTSHHHHHHH
T ss_pred             CChhHCcCHHHHhhCHhhCcCC
Confidence            9999999999999999997543

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.7e-59  Score=452.91  Aligned_cols=260  Identities=27%  Similarity=0.394  Sum_probs=227.3

Q ss_pred             cccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      ..+.|++.+.||+|+||+||+|+++.  +++.||||++.+.....                         ......+.+|
T Consensus        13 p~~~y~~l~~lG~G~fg~Vy~a~~~~--~~~~vAvK~i~~~~~~~-------------------------~~~~~~~~~E   65 (309)
T d1u5ra_          13 PEKLFSDLREIGHGSFGAVYFARDVR--NSEVVAIKKMSYSGKQS-------------------------NEKWQDIIKE   65 (309)
T ss_dssp             HHHHEEEEEEEEECSSSEEEEEEETT--TTEEEEEEEEECCSSCH-------------------------HHHHHHHHHH
T ss_pred             cHHhcEeeEEEecCCCeEEEEEEECC--CCcEEEEEEEchhhccC-------------------------HHHHHHHHHH
Confidence            34569999999999999999999988  78999999997643211                         1223457899


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecc
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRD  167 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~d  167 (521)
                      +.+++++     +|||||++++++.+++.+|+|||||.||+|..++...+++++.+++.++.||+.||.|||++||+|||
T Consensus        66 i~il~~l-----~HpnIv~~~~~~~~~~~~~iv~E~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrD  140 (309)
T d1u5ra_          66 VRFLQKL-----RHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRD  140 (309)
T ss_dssp             HHHHTTC-----CCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCC
T ss_pred             HHHHHHC-----CCCCEeeEEEEEEECCEEEEEEEecCCCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccC
Confidence            9999998     99999999999999999999999999999988888888999999999999999999999999999999


Q ss_pred             CCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCccccccccccc---CCCCchhhhHHHHHHHHHHHhCCCCC
Q 009980          168 LKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQ---DRITSKSDMWSLGVILYILLSGYPPF  244 (521)
Q Consensus       168 lkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwslG~il~~ll~g~~pf  244 (521)
                      |||+|||+   +.++.+||+|||+|+....   ....+||+.|+|||++.+   +.|+.++|||||||++|+|++|.+||
T Consensus       141 iKp~NILl---~~~~~~Kl~DFG~a~~~~~---~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf  214 (309)
T d1u5ra_         141 VKAGNILL---SEPGLVKLGDFGSASIMAP---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL  214 (309)
T ss_dssp             CSGGGEEE---ETTTEEEECCCTTCBSSSS---BCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred             CCcceEEE---CCCCCEEEeecccccccCC---CCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCC
Confidence            99999999   6778899999999986543   345679999999999864   46899999999999999999999999


Q ss_pred             CCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCCC
Q 009980          245 IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSA  307 (521)
Q Consensus       245 ~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~~  307 (521)
                      .+.+..+....+..+..+...  ...+|+++++||.+||+.||.+|||++++|+||||.....
T Consensus       215 ~~~~~~~~~~~i~~~~~~~~~--~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~Hp~~~~~~~  275 (309)
T d1u5ra_         215 FNMNAMSALYHIAQNESPALQ--SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERP  275 (309)
T ss_dssp             TTSCHHHHHHHHHHSCCCCCS--CTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSCCC
T ss_pred             CCCCHHHHHHHHHhCCCCCCC--CCCCCHHHHHHHHHHCcCChhHCcCHHHHHhCHHhcCCCC
Confidence            998888888877777654432  2568999999999999999999999999999999986543

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=3.5e-59  Score=452.54  Aligned_cols=256  Identities=27%  Similarity=0.502  Sum_probs=231.6

Q ss_pred             ccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEI   88 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   88 (521)
                      .++|++++.||+|+||+||+|+++.  +++.||||++++.....                         ......+.+|+
T Consensus         3 l~dy~i~~~lG~G~fg~Vy~a~~~~--~g~~vAvK~i~~~~~~~-------------------------~~~~~~~~~E~   55 (316)
T d1fota_           3 LQDFQILRTLGTGSFGRVHLIRSRH--NGRYYAMKVLKKEIVVR-------------------------LKQVEHTNDER   55 (316)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETT--TCCEEEEEEEEHHHHHH-------------------------TTCHHHHHHHH
T ss_pred             hhHeEEEEEEecCcCcEEEEEEECC--CCCEEEEEEEchHHccC-------------------------HHHHHHHHHHH
Confidence            3689999999999999999999988  78999999997532211                         01235588999


Q ss_pred             HHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 009980           89 LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDL  168 (521)
Q Consensus        89 ~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dl  168 (521)
                      .+++++     +||||+++++++.+++.+|+|||||.||+|..++.....+++..++.++.||+.||.|||++||+||||
T Consensus        56 ~il~~l-----~HpnIv~~~~~~~~~~~~~ivmE~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDi  130 (316)
T d1fota_          56 LMLSIV-----THPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDL  130 (316)
T ss_dssp             HHHHSC-----CBTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCC
T ss_pred             HHHHhc-----cCcChhheeeeEeeCCeeeeEeeecCCccccccccccccccccHHHHHHHHHHHhhhhhccCcEEcccc
Confidence            999998     999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCC
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQS  248 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~  248 (521)
                      ||+|||+   +.++.+||+|||+|+....  .....+||+.|+|||++.+.+|+.++|||||||++|+|++|++||.+.+
T Consensus       131 Kp~NILl---~~~g~vkL~DFG~a~~~~~--~~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~  205 (316)
T d1fota_         131 KPENILL---DKNGHIKITDFGFAKYVPD--VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSN  205 (316)
T ss_dssp             CGGGEEE---CTTSCEEECCCSSCEECSS--CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred             CchheeE---cCCCCEEEecCccceEecc--ccccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcC
Confidence            9999999   7788999999999987543  3345689999999999999999999999999999999999999999999


Q ss_pred             cHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCC-----CHHHHHcCCcccCC
Q 009980          249 NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRP-----SAQELLNHPWVIGD  305 (521)
Q Consensus       249 ~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~-----t~~~~l~h~~~~~~  305 (521)
                      ..+....+..+...++    ..+|++++++|.+||.+||.+|+     |++++|+||||++.
T Consensus       206 ~~~~~~~i~~~~~~~p----~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~Hp~f~~i  263 (316)
T d1fota_         206 TMKTYEKILNAELRFP----PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEV  263 (316)
T ss_dssp             HHHHHHHHHHCCCCCC----TTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSC
T ss_pred             HHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHcCcccccC
Confidence            9999999998887665    45899999999999999999996     99999999999764

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2.2e-58  Score=453.05  Aligned_cols=256  Identities=28%  Similarity=0.476  Sum_probs=231.1

Q ss_pred             ccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEI   88 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   88 (521)
                      .++|++++.||+|+||+||+|+++.  +++.||||++.+.....                         ......+.+|+
T Consensus        40 ld~y~i~~~lG~G~fg~Vy~a~~~~--~g~~~AvK~i~~~~~~~-------------------------~~~~~~~~~E~   92 (350)
T d1rdqe_          40 LDQFDRIKTLGTGSFGRVMLVKHKE--SGNHYAMKILDKQKVVK-------------------------LKQIEHTLNEK   92 (350)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETT--TCCEEEEEEEEHHHHHH-------------------------TTCHHHHHHHH
T ss_pred             ccCeEEEEEeecCcCcEEEEEEECC--CCCEEEEEEEchHHccC-------------------------HHHHHHHHHHH
Confidence            4799999999999999999999998  78999999997532211                         01234578999


Q ss_pred             HHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 009980           89 LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDL  168 (521)
Q Consensus        89 ~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dl  168 (521)
                      .+++++     +|||||++++++.+...+|+||||+.||+|.+++...+.+++..++.++.||+.||.|||++||+||||
T Consensus        93 ~il~~l-----~hpnIv~~~~~~~~~~~~~~v~e~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDI  167 (350)
T d1rdqe_          93 RILQAV-----NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL  167 (350)
T ss_dssp             HHHTTC-----CCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             HHHHHc-----CCCcEeecccccccccccccccccccccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCcC
Confidence            999988     999999999999999999999999999999999999899999999999999999999999999999999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCCC
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQS  248 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~  248 (521)
                      ||+|||+   +.++.+||+|||+|+....  .....+||+.|||||++.+..|+.++|||||||++|+|++|++||.+.+
T Consensus       168 KP~NILl---~~~g~ikL~DFG~a~~~~~--~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~  242 (350)
T d1rdqe_         168 KPENLLI---DQQGYIQVTDFGFAKRVKG--RTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ  242 (350)
T ss_dssp             SGGGEEE---CTTSCEEECCCTTCEECSS--CBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             CHHHccc---CCCCCEEeeeceeeeeccc--ccccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcC
Confidence            9999999   7788999999999987643  2345689999999999999999999999999999999999999999999


Q ss_pred             cHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCC-----CHHHHHcCCcccCC
Q 009980          249 NRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRP-----SAQELLNHPWVIGD  305 (521)
Q Consensus       249 ~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~-----t~~~~l~h~~~~~~  305 (521)
                      .......+..+...++    ..+|+++++||.+||.+||.+|+     |++++++||||++.
T Consensus       243 ~~~~~~~i~~~~~~~p----~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~Hp~f~~~  300 (350)
T d1rdqe_         243 PIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT  300 (350)
T ss_dssp             HHHHHHHHHHCCCCCC----TTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTC
T ss_pred             HHHHHHHHhcCCCCCC----ccCCHHHHHHHHHHhhhCHHhccccccccHHHHHcCccccCC
Confidence            9999999988877665    46899999999999999999994     99999999999764

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.4e-58  Score=445.59  Aligned_cols=257  Identities=26%  Similarity=0.424  Sum_probs=227.2

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ++|++++.||+|+||+||+|+++.  +++.||||++++.....                         ......+..|..
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~--t~~~vAvK~i~k~~~~~-------------------------~~~~~~~~~e~~   54 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKK--TNQFFAIKALKKDVVLM-------------------------DDDVECTMVEKR   54 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETT--TTEEEEEEEEEHHHHHH-------------------------TTCHHHHHHHHH
T ss_pred             CCeEEeeEEecCCCcEEEEEEECC--CCCEEEEEEEchhhccC-------------------------hHHHHHHHHHHH
Confidence            689999999999999999999998  88999999997532111                         011233556666


Q ss_pred             HHH-HHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 009980           90 VMR-KIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDL  168 (521)
Q Consensus        90 ~l~-~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dl  168 (521)
                      ++. .+     +|||||++++++.+++.+|||||||+||+|.+++...+.+++.+++.++.||+.||.|||++||+||||
T Consensus        55 ~l~~~~-----~hp~Iv~~~~~~~~~~~~yivmEy~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDi  129 (320)
T d1xjda_          55 VLSLAW-----EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDL  129 (320)
T ss_dssp             HHHHHT-----TCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCC
T ss_pred             HHHHhC-----CCCcEEEEEEEEccCCceeEEEeecCCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccC
Confidence            655 45     999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCccCCCC-CCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSSVEGYT-DPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQ  247 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~  247 (521)
                      ||+|||+   +..+.+||+|||+|+..... ......+||+.|+|||++.+.+|+.++||||+||++|+|++|+.||.+.
T Consensus       130 kp~NiL~---~~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~  206 (320)
T d1xjda_         130 KLDNILL---DKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ  206 (320)
T ss_dssp             CGGGEEE---CTTSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             cccceee---cCCCceeccccchhhhcccccccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCC
Confidence            9999999   78889999999999865433 3344568999999999999999999999999999999999999999999


Q ss_pred             CcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHH-HHHcCCcccCC
Q 009980          248 SNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQ-ELLNHPWVIGD  305 (521)
Q Consensus       248 ~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~-~~l~h~~~~~~  305 (521)
                      +..+....+..+.+.++    +.+|+++++||.+||.+||.+|||+. ++++||||++-
T Consensus       207 ~~~~~~~~i~~~~~~~p----~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~hpff~~~  261 (320)
T d1xjda_         207 DEEELFHSIRMDNPFYP----RWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREI  261 (320)
T ss_dssp             SHHHHHHHHHHCCCCCC----TTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTTC
T ss_pred             CHHHHHHHHHcCCCCCC----ccCCHHHHHHHHHhcccCCCCCcCHHHHHHhCchhccC
Confidence            99999999988877655    46899999999999999999999995 89999999753

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=1.9e-57  Score=448.76  Aligned_cols=263  Identities=26%  Similarity=0.414  Sum_probs=218.0

Q ss_pred             ccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEI   88 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   88 (521)
                      .++|++.+.||+|+||.||+|+++.  +++.||||++.+.....                         ......+.+|.
T Consensus         3 lddy~i~~~lG~G~fg~Vy~~~~~~--t~~~vAiK~i~~~~~~~-------------------------~~~~~~~~~e~   55 (364)
T d1omwa3           3 MNDFSVHRIIGRGGFGEVYGCRKAD--TGKMYAMKCLDKKRIKM-------------------------KQGETLALNER   55 (364)
T ss_dssp             STTEEEEEEEEECSSCEEEEEEETT--TCCEEEEEEEEHHHHHH-------------------------HTCHHHHHHHH
T ss_pred             HHhCeeeeEEecCCCeEEEEEEECC--CCCEEEEEEEchHHcch-------------------------hhHHHHHHHHH
Confidence            4689999999999999999999998  88999999997532211                         11123345554


Q ss_pred             HHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 009980           89 LVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDL  168 (521)
Q Consensus        89 ~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dl  168 (521)
                      ..++.+  ...+|||||++++++.+++.+|+|||||+||+|.+++.+...+++..++.++.||+.||.|||++||+||||
T Consensus        56 ~~~~~l--~~~~hpnIv~l~~~~~~~~~~~ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDl  133 (364)
T d1omwa3          56 IMLSLV--STGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDL  133 (364)
T ss_dssp             HHHHHH--SSSCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             HHHHHH--hcCCCCcEEEEEEEEEECCEEEEEEEecCCCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHCCccceee
Confidence            444433  112899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCccccccccccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQ-DRITSKSDMWSLGVILYILLSGYPPFIAQ  247 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~  247 (521)
                      ||+|||+   +.++.+||+|||+|+..... .....+||+.|+|||++.. ..|+.++|||||||++|+|+||++||.+.
T Consensus       134 KP~NILl---~~~g~iKl~DFGla~~~~~~-~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~  209 (364)
T d1omwa3         134 KPANILL---DEHGHVRISDLGLACDFSKK-KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQH  209 (364)
T ss_dssp             SGGGEEE---CSSSCEEECCCTTCEECSSS-CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSS
T ss_pred             ccceeEE---cCCCcEEEeeeceeeecCCC-cccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCC
Confidence            9999999   77889999999999876543 3345689999999999974 56899999999999999999999999876


Q ss_pred             CcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCC-----HHHHHcCCcccCC
Q 009980          248 SNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPS-----AQELLNHPWVIGD  305 (521)
Q Consensus       248 ~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t-----~~~~l~h~~~~~~  305 (521)
                      +........ ......+...+..+|+++++||.+||.+||.+|||     ++++++||||++-
T Consensus       210 ~~~~~~~~~-~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~Hp~f~~i  271 (364)
T d1omwa3         210 KTKDKHEID-RMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSL  271 (364)
T ss_dssp             CSSCHHHHH-HHSSSCCCCCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTSGGGTTC
T ss_pred             CHHHHHHHH-HhcccCCCCCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHcCccccCC
Confidence            654433222 22222233344679999999999999999999999     7999999999864

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.7e-57  Score=430.40  Aligned_cols=260  Identities=30%  Similarity=0.474  Sum_probs=218.2

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      .+.++|++++.||+|+||+||+|+++.  +++.||||++++.......                      .......+.+
T Consensus         1 pl~~~Y~i~~~lG~G~fg~Vy~a~~~~--~~~~vAvK~i~~~~~~~~~----------------------~~~~~~~~~~   56 (273)
T d1xwsa_           1 PLESQYQVGPLLGSGGFGSVYSGIRVS--DNLPVAIKHVEKDRISDWG----------------------ELPNGTRVPM   56 (273)
T ss_dssp             CCTTTEEEEEEEEEETTEEEEEEEETT--TCCEEEEEEEEGGGCCCEE----------------------ECTTCCEEEH
T ss_pred             CCCCeEEEeEEEeeCCCeEEEEEEECC--CCCEEEEEEEehHHccchh----------------------hhhHHHHHHH
Confidence            367899999999999999999999998  7899999999865432210                      0001122568


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCC-CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSG-GELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~g-g~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      |+.+++++.   ..|||||++++++.+++.+|+||||+.| +++.+++.....+++.+++.++.||+.||.|||++||+|
T Consensus        57 E~~il~~l~---~~h~nIv~~~~~~~~~~~~~lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~~iiH  133 (273)
T d1xwsa_          57 EVVLLKKVS---SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLH  133 (273)
T ss_dssp             HHHHHHHHC---SSSCSBCCEEEEEECSSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             HHHHHHHhc---cCCCCccEEEEEEeeCCeEEEEEEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcc
Confidence            999999981   1399999999999999999999999986 678888888889999999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCC-CchhhhHHHHHHHHHHHhCCCCC
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRI-TSKSDMWSLGVILYILLSGYPPF  244 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~~ll~g~~pf  244 (521)
                      |||||+|||+.  ...+.+||+|||+|+.... ......+||+.|+|||++.+..+ +.++||||+||++|+|++|++||
T Consensus       134 rDiKp~NIll~--~~~~~vkl~DFG~a~~~~~-~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf  210 (273)
T d1xwsa_         134 RDIKDENILID--LNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF  210 (273)
T ss_dssp             SCCSGGGEEEE--TTTTEEEECCCTTCEECCS-SCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSC
T ss_pred             ccCcccceEEe--cCCCeEEECccccceeccc-ccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCC
Confidence            99999999992  2346899999999986543 23455689999999999987765 67899999999999999999999


Q ss_pred             CCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCC
Q 009980          245 IAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDS  306 (521)
Q Consensus       245 ~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~  306 (521)
                      .+.      ..+..+...++    ..+|+++++||.+||+.||.+|||++|+|+||||++..
T Consensus       211 ~~~------~~i~~~~~~~~----~~~s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~~~  262 (273)
T d1xwsa_         211 EHD------EEIIRGQVFFR----QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVL  262 (273)
T ss_dssp             CSH------HHHHHCCCCCS----SCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCC
T ss_pred             CCc------hHHhhcccCCC----CCCCHHHHHHHHHHccCCHhHCcCHHHHhcCHhhCCCC
Confidence            753      23555555444    56899999999999999999999999999999997643

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.7e-57  Score=434.17  Aligned_cols=261  Identities=25%  Similarity=0.333  Sum_probs=216.6

Q ss_pred             ecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHH
Q 009980           14 VTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRK   93 (521)
Q Consensus        14 ~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~   93 (521)
                      .+++||+|+||+||+|+++.  +++.||||++++......                       .......+.+|+.++++
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~~--~~~~vAvK~i~~~~~~~~-----------------------~~~~~~~~~~Ei~il~~   56 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDKN--TNQIVAIKKIKLGHRSEA-----------------------KDGINRTALREIKLLQE   56 (299)
T ss_dssp             EEEEEEEETTEEEEEEECSS--CCSEEEEEEC-----------------------------------CTHHHHHHHHHHH
T ss_pred             cceEeccCcCeEEEEEEECC--CCcEEEEEEEehhhhhhh-----------------------hHHHHHHHHHHHHHHHh
Confidence            46789999999999999988  789999999975432210                       00112357899999999


Q ss_pred             HhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcE
Q 009980           94 IVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENC  173 (521)
Q Consensus        94 l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Ni  173 (521)
                      +     +|||||++++++.+++.+|||||||.|+++.........+++..++.++.||+.||+|||++||+||||||+||
T Consensus        57 l-----~hpnIv~~~~~~~~~~~~~ivmE~~~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NI  131 (299)
T d1ua2a_          57 L-----SHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNL  131 (299)
T ss_dssp             C-----CCTTBCCEEEEECCTTCCEEEEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGE
T ss_pred             C-----CCCCEeEEEeeeccCCceeehhhhhcchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceE
Confidence            9     99999999999999999999999999988877777677899999999999999999999999999999999999


Q ss_pred             EEeeCCCCCCEEEeecCCCccCCCCC-CcccccCCccccccccccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCCcHH
Q 009980          174 LFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALLQ-DRITSKSDMWSLGVILYILLSGYPPFIAQSNRQ  251 (521)
Q Consensus       174 l~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~  251 (521)
                      |+   +..+.+||+|||+|+...... .....+||+.|+|||++.+ ..|+.++||||+||++|+|++|.+||.+.+..+
T Consensus       132 li---~~~~~~KL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~  208 (299)
T d1ua2a_         132 LL---DENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD  208 (299)
T ss_dssp             EE---CTTCCEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred             Ee---cCCCccccccCccccccCCCcccccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHH
Confidence            99   788999999999997654332 3345679999999999865 467999999999999999999999999998888


Q ss_pred             HHHHHHcCCCCCc------------------------hhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCCCC
Q 009980          252 KQQMIMAGEFSFY------------------------EQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSA  307 (521)
Q Consensus       252 ~~~~i~~~~~~~~------------------------~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~~~  307 (521)
                      ....+......+.                        ...++.+|+++++||.+||+.||++|||++|+|+||||+....
T Consensus       209 ~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~p~  288 (299)
T d1ua2a_         209 QLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPG  288 (299)
T ss_dssp             HHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSSC
T ss_pred             HHHHHHHhcCCCChhhccchhccchhhhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCCHhhCCCCC
Confidence            7777654211111                        1223467899999999999999999999999999999986543

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.3e-56  Score=428.18  Aligned_cols=263  Identities=26%  Similarity=0.396  Sum_probs=222.8

Q ss_pred             ccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHH
Q 009980            5 TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALL   84 (521)
Q Consensus         5 ~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (521)
                      +..+.++|++.+.||+|+||+||+|+++.  +++.||||++++.....                         ......+
T Consensus         2 p~~l~drY~i~~~lG~G~fg~Vy~a~~~~--~~~~vAiK~i~~~~~~~-------------------------~~~~~~~   54 (277)
T d1o6ya_           2 PSHLSDRYELGEILGFGGMSEVHLARDLR--LHRDVAVKVLRADLARD-------------------------PSFYLRF   54 (277)
T ss_dssp             CSEETTTEEEEEEEEECSSEEEEEEEETT--TTEEEEEEEECSTTTTC-------------------------HHHHHHH
T ss_pred             CcCccceeEEeEEEeeCCCeEEEEEEECC--CCCEEEEEEEchhhccC-------------------------HHHHHHH
Confidence            56788999999999999999999999988  78999999997643321                         1223458


Q ss_pred             HHHHHHHHHHhhccCCCCCccceeEEEEeCC----eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Q 009980           85 TNEILVMRKIVENVSPHPNVIDLYDVYEDQN----GVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ  160 (521)
Q Consensus        85 ~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~----~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~  160 (521)
                      .+|+.+++++     +||||+++++++...+    .+|||||||+|++|.+++...+++++.+++.++.||+.||.|||+
T Consensus        55 ~~E~~~l~~~-----~hpniv~~~~~~~~~~~~~~~~~lvmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~  129 (277)
T d1o6ya_          55 RREAQNAAAL-----NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQ  129 (277)
T ss_dssp             HHHHHHHHTC-----CCTTBCCEEEEEEEECSSSEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhc-----CCCCCCcccceeeeccCCCceEEEEEECCCCCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            8999999998     9999999999997654    489999999999999999999999999999999999999999999


Q ss_pred             CCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC----CcccccCCcccccccccccCCCCchhhhHHHHHHHHH
Q 009980          161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD----PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYI  236 (521)
Q Consensus       161 ~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~  236 (521)
                      +||+||||||+|||+   +.++.++++|||.+.......    .....+||+.|+|||++.+..|++++||||+||++|+
T Consensus       130 ~~iiHrDiKP~NIll---~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilye  206 (277)
T d1o6ya_         130 NGIIHRDVKPANIMI---SATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYE  206 (277)
T ss_dssp             TTEECCCCSGGGEEE---ETTSCEEECCCTTCEECC----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred             CCccCccccCccccc---CccccceeehhhhhhhhccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHH
Confidence            999999999999999   678889999999986543222    2345679999999999999999999999999999999


Q ss_pred             HHhCCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcc
Q 009980          237 LLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV  302 (521)
Q Consensus       237 ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~  302 (521)
                      |+||.+||.+.+..+....+......++...++.+|+++++||.+||++||.+||+..+.+.|+|.
T Consensus       207 lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~  272 (277)
T d1o6ya_         207 VLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLV  272 (277)
T ss_dssp             HHHSSCSCCCSSHHHHHHHHHHCCCCCGGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred             HHhCCCCCCCcCHHHHHHHHHhcCCCCCchhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHH
Confidence            999999999999888888888888777777788999999999999999999999954444456664

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-55  Score=426.77  Aligned_cols=267  Identities=25%  Similarity=0.366  Sum_probs=220.8

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      +..++|++++.||+|+||+||+|+++.+ +++.||||+++.......                          ......+
T Consensus         4 ~~~~~Y~i~~~LG~G~fg~V~~a~~~~~-~~~~vAiK~i~~~~~~~~--------------------------~~~~~~~   56 (305)
T d1blxa_           4 RADQQYECVAEIGEGAYGKVFKARDLKN-GGRFVALKRVRVQTGEEG--------------------------MPLSTIR   56 (305)
T ss_dssp             CGGGTEEEEEEEEEETTEEEEEEEETTT-TTEEEEEEEEEEEBCTTS--------------------------CBCTHHH
T ss_pred             CCcCCEEEEEEEecccCeEEEEEEEECC-CCEEEEEEEEehhhccch--------------------------HHHHHHH
Confidence            3468999999999999999999999762 367799999976433211                          1123567


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEe-----CCeEEEEEeccCCCchHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHH
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYED-----QNGVHLILELCSGGELFDRIV-AQERYMEVGAAAVIRQIAEGLAALHQ  160 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~-----~~~~~lv~e~~~gg~L~~~l~-~~~~~~~~~~~~i~~qil~al~~lH~  160 (521)
                      |+.+++.|..  .+||||++++++|..     ...+|++||||.|+.+..... ....+++..++.++.|++.||+|||+
T Consensus        57 E~~~l~~l~~--~~HpnIv~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~  134 (305)
T d1blxa_          57 EVAVLRHLET--FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS  134 (305)
T ss_dssp             HHHHHHHHHH--TCCTTBCCEEEEEEEEECSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhh--cCCCCcceeeeeecccccccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            8888877632  279999999999853     347899999999987754433 34679999999999999999999999


Q ss_pred             CCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhC
Q 009980          161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSG  240 (521)
Q Consensus       161 ~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g  240 (521)
                      +||+||||||+|||+   +..+.+||+|||+++...........+||+.|+|||++.+.+|+.++||||+||++|+|++|
T Consensus       135 ~~ivHrDiKp~NILi---~~~~~~kl~dfg~~~~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g  211 (305)
T d1blxa_         135 HRVVHRDLKPQNILV---TSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRR  211 (305)
T ss_dssp             TTCCCCCCCGGGEEE---CTTCCEEECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHS
T ss_pred             CCEEecCCCccEEEE---cCCCCeeecchhhhhhhcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHC
Confidence            999999999999999   77889999999999877666666677899999999999999999999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHHcCCCC-----------------------CchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHH
Q 009980          241 YPPFIAQSNRQKQQMIMAGEFS-----------------------FYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELL  297 (521)
Q Consensus       241 ~~pf~~~~~~~~~~~i~~~~~~-----------------------~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l  297 (521)
                      ++||.+.+..+....+......                       .....+..+|+.+++||.+||.+||.+|||+.|+|
T Consensus       212 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L  291 (305)
T d1blxa_         212 KPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL  291 (305)
T ss_dssp             SCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHhhCCCchhcccccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHh
Confidence            9999998888777766532111                       11123356899999999999999999999999999


Q ss_pred             cCCcccCC
Q 009980          298 NHPWVIGD  305 (521)
Q Consensus       298 ~h~~~~~~  305 (521)
                      +||||+.-
T Consensus       292 ~Hpff~~i  299 (305)
T d1blxa_         292 SHPYFQDL  299 (305)
T ss_dssp             TSGGGTTC
T ss_pred             cChhhcCc
Confidence            99999754

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-55  Score=426.12  Aligned_cols=263  Identities=25%  Similarity=0.369  Sum_probs=216.1

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ++|++++.||+|+||+||+|+++.  +++.||||+++......                          .....+.+|+.
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~--~~~~vAvK~i~~~~~~~--------------------------~~~~~~~~Ei~   53 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKL--TGEVVALKKIRLDTETE--------------------------GVPSTAIREIS   53 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETT--TCCEEEEEEEC---------------------------------CCHHHHHHHH
T ss_pred             CCCEeccEEecCcCeEEEEEEECC--CCCEEEEEEEehhhcCh--------------------------HHHHHHHHHHH
Confidence            689999999999999999999988  78899999996532211                          12345889999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIV-AQERYMEVGAAAVIRQIAEGLAALHQANIVHRDL  168 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~-~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dl  168 (521)
                      +++++     +|||||++++++.+++.+|+|||||.|+.+..... ....+++..++.++.||+.||.|||++||+||||
T Consensus        54 il~~l-----~Hp~Iv~~~~~~~~~~~~~iv~e~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDi  128 (298)
T d1gz8a_          54 LLKEL-----NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL  128 (298)
T ss_dssp             HHTTC-----CCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             HHHhC-----CCCcEEEeccccccccceeEEEeecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEcccc
Confidence            99998     99999999999999999999999997754433323 3456999999999999999999999999999999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCccCCCC-CCcccccCCcccccccccccCCC-CchhhhHHHHHHHHHHHhCCCCCCC
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSSVEGYT-DPVVGLFGSIDYVSPEALLQDRI-TSKSDMWSLGVILYILLSGYPPFIA  246 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~~ll~g~~pf~~  246 (521)
                      ||+|||+   +.++.+||+|||+|+..... .......||+.|+|||++....+ +.++||||+||++|+|++|++||.+
T Consensus       129 KpeNIl~---~~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~  205 (298)
T d1gz8a_         129 KPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG  205 (298)
T ss_dssp             CGGGEEE---CTTSCEEECSTTHHHHHCCCSBCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             Cchheee---cccCcceeccCCcceeccCCcccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCC
Confidence            9999999   77889999999999765432 33445679999999999876654 7899999999999999999999998


Q ss_pred             CCcHHHHHHHHcCCCCCc-------------------------hhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCc
Q 009980          247 QSNRQKQQMIMAGEFSFY-------------------------EQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPW  301 (521)
Q Consensus       247 ~~~~~~~~~i~~~~~~~~-------------------------~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~  301 (521)
                      .+..+....+......+.                         ...+..+|+++++||.+||..||.+|||++|+|+|||
T Consensus       206 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~f  285 (298)
T d1gz8a_         206 DSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF  285 (298)
T ss_dssp             SSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGG
T ss_pred             CCHHHHHHHHHHhcCCCchhhccccccccccccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCCHh
Confidence            887776665543211111                         1123467899999999999999999999999999999


Q ss_pred             ccCCCCc
Q 009980          302 VIGDSAK  308 (521)
Q Consensus       302 ~~~~~~~  308 (521)
                      |+.-..+
T Consensus       286 f~~~~~p  292 (298)
T d1gz8a_         286 FQDVTKP  292 (298)
T ss_dssp             GTTCCCC
T ss_pred             hccCCCC
Confidence            9865443

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=1e-54  Score=417.29  Aligned_cols=258  Identities=26%  Similarity=0.409  Sum_probs=215.8

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ++|++.+.||+|+||+||+|+++   +++.||||+++......                          .....+.+|+.
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~---~~~~vAvK~i~~~~~~~--------------------------~~~~~~~~E~~   52 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNN---YGETFALKKIRLEKEDE--------------------------GIPSTTIREIS   52 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEET---TSCEEEEEEECCSSGGG--------------------------CCCHHHHHHHH
T ss_pred             CCceeccEEecCCCcEEEEEEeC---CCCEEEEEEEehhhcCh--------------------------HHHHHHHHHHH
Confidence            69999999999999999999986   57899999996543211                          12345889999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCC
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLK  169 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlk  169 (521)
                      +|+++     +||||+++++++.+++..|++|||+.|+.+..+....+.+++..++.++.||+.||+|||++||+|||||
T Consensus        53 il~~l-----~hpnIv~~~~~~~~~~~~~i~~e~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiK  127 (286)
T d1ob3a_          53 ILKEL-----KHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLK  127 (286)
T ss_dssp             GGGGC-----CCTTBCCEEEEEECSSCEEEEEECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred             HHHhC-----CCCcEEeeeeecccCCceeEEEEeehhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccCcEEecCCC
Confidence            99998     9999999999999999999999999988887777778889999999999999999999999999999999


Q ss_pred             CCcEEEeeCCCCCCEEEeecCCCccCCCCC-CcccccCCcccccccccccC-CCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 009980          170 PENCLFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALLQD-RITSKSDMWSLGVILYILLSGYPPFIAQ  247 (521)
Q Consensus       170 p~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~  247 (521)
                      |+|||+   +.++.+||+|||.|....... ......|++.|+|||.+.+. .++.++||||+||++|+|++|++||.+.
T Consensus       128 p~NIll---~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~  204 (286)
T d1ob3a_         128 PQNLLI---NREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGV  204 (286)
T ss_dssp             GGGEEE---CTTSCEEECCTTHHHHHCC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             CceeeE---cCCCCEEecccccceecccCccccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCC
Confidence            999999   778899999999997654322 23445689999999998754 5689999999999999999999999988


Q ss_pred             CcHHHHHHHHcCCCCCc-------------------------hhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcc
Q 009980          248 SNRQKQQMIMAGEFSFY-------------------------EQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWV  302 (521)
Q Consensus       248 ~~~~~~~~i~~~~~~~~-------------------------~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~  302 (521)
                      +..+...++......+.                         ......+|+.+++||.+||++||++|||++|+|+||||
T Consensus       205 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~Hp~f  284 (286)
T d1ob3a_         205 SEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYF  284 (286)
T ss_dssp             SHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGG
T ss_pred             CHHHHHHHHHHhhCCCChhhccchhhhhhcccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcCccc
Confidence            87777666543211111                         12234578999999999999999999999999999999


Q ss_pred             cC
Q 009980          303 IG  304 (521)
Q Consensus       303 ~~  304 (521)
                      +.
T Consensus       285 ~~  286 (286)
T d1ob3a_         285 KE  286 (286)
T ss_dssp             GC
T ss_pred             Cc
Confidence            63

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-54  Score=412.46  Aligned_cols=249  Identities=24%  Similarity=0.360  Sum_probs=210.8

Q ss_pred             ccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHHh
Q 009980           16 DILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIV   95 (521)
Q Consensus        16 ~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~   95 (521)
                      +.||+|+||+||+|.++..++++.||||+++......                          .....+.+|+.+++++ 
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~--------------------------~~~~~~~~E~~il~~l-   65 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDP--------------------------ALKDELLAEANVMQQL-   65 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----C--------------------------HHHHHHHHHHHHHHTC-
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCH--------------------------HHHHHHHHHHHHHHhC-
Confidence            4799999999999988765577899999996432211                          2245688999999998 


Q ss_pred             hccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEE
Q 009980           96 ENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLF  175 (521)
Q Consensus        96 ~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~  175 (521)
                          +|||||++++++.++ ..|||||||+||+|.+++.....+++..+..++.||+.||.|||++||+||||||+|||+
T Consensus        66 ----~HpnIv~~~g~~~~~-~~~lvmE~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill  140 (277)
T d1xbba_          66 ----DNPYIVRMIGICEAE-SWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL  140 (277)
T ss_dssp             ----CCTTBCCEEEEEESS-SEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE
T ss_pred             ----CCCCCceEEEEeccC-CEEEEEEcCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhcc
Confidence                999999999999654 578999999999999999998999999999999999999999999999999999999999


Q ss_pred             eeCCCCCCEEEeecCCCccCCCCCC----cccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCCcH
Q 009980          176 LNDREDSPLKIMDFGLSSVEGYTDP----VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFIAQSNR  250 (521)
Q Consensus       176 ~~~~~~~~~kl~Dfg~a~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~  250 (521)
                         +.++.+||+|||+|+.......    .....||+.|+|||++.+..|+.++||||+||++|+|+| |.+||.+.+..
T Consensus       141 ---~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~  217 (277)
T d1xbba_         141 ---VTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS  217 (277)
T ss_dssp             ---EETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH
T ss_pred             ---cccCcccccchhhhhhccccccccccccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHH
Confidence               6678899999999986543322    223468999999999999999999999999999999998 89999999988


Q ss_pred             HHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHH---cCCcc
Q 009980          251 QKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELL---NHPWV  302 (521)
Q Consensus       251 ~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l---~h~~~  302 (521)
                      +....+.++.....   +..+|+++++||.+||+.||.+|||+++++   +|+|+
T Consensus       218 ~~~~~i~~~~~~~~---p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~~~  269 (277)
T d1xbba_         218 EVTAMLEKGERMGC---PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY  269 (277)
T ss_dssp             HHHHHHHTTCCCCC---CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCCCCC---CcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCHHh
Confidence            88888887653322   356899999999999999999999999984   55554

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=5.7e-54  Score=410.63  Aligned_cols=249  Identities=25%  Similarity=0.378  Sum_probs=212.9

Q ss_pred             cccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      -.++|++.+.||+|+||+||+|+++.  +++.||||++++..                             .....+.+|
T Consensus        15 ~~~~~~~~~~iG~G~fg~Vy~a~~~~--~~~~vAvK~i~~~~-----------------------------~~~~~~~~E   63 (287)
T d1opja_          15 ERTDITMKHKLGGGQYGEVYEGVWKK--YSLTVAVKTLKEDT-----------------------------MEVEEFLKE   63 (287)
T ss_dssp             CGGGEEEEEETTTTTTSSEEEEEEGG--GTEEEEEEECCTTC-----------------------------SCHHHHHHH
T ss_pred             cHHHeEEeeEEeeCCCeEEEEEEECC--CCeEEEEEEECCcc-----------------------------chHHHHHHH
Confidence            45689999999999999999999987  78899999986422                             123458899


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ--ERYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      +.+++++     +|||||++++++.+++.+|||||||++|+|.+++...  ..+++..+..++.||+.||.|||++||+|
T Consensus        64 ~~il~~l-----~HpnIv~~~~~~~~~~~~~iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiH  138 (287)
T d1opja_          64 AAVMKEI-----KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH  138 (287)
T ss_dssp             HHHHHHC-----CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             HHHHHhC-----CCCCEecCCccEeeCCeeEEEeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCccc
Confidence            9999999     9999999999999999999999999999999998764  56899999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC--cccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCC
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP--VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPP  243 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~p  243 (521)
                      |||||+|||+   +.++.+||+|||+|+.......  .....||+.|+|||++.+..|+.++||||+||++|+|++|..|
T Consensus       139 rDlKp~NILl---~~~~~~Kl~DFG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p  215 (287)
T d1opja_         139 RDLAARNCLV---GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS  215 (287)
T ss_dssp             SCCSGGGEEE---CGGGCEEECCCCCTTTCCSSSSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCC
T ss_pred             CccccCeEEE---CCCCcEEEccccceeecCCCCceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCC
Confidence            9999999999   7788999999999987644322  2334588999999999999999999999999999999996555


Q ss_pred             -CCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          244 -FIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       244 -f~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                       |.+.+..+....+..+. .+  +.+..+|+++++||.+||+.||.+|||+.++++
T Consensus       216 ~~~~~~~~~~~~~i~~~~-~~--~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~  268 (287)
T d1opja_         216 PYPGIDLSQVYELLEKDY-RM--ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ  268 (287)
T ss_dssp             SSTTCCHHHHHHHHHTTC-CC--CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCcchHHHHHHHHhcCC-CC--CCCccchHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence             45555555555555442 22  233678999999999999999999999999976

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.1e-54  Score=410.60  Aligned_cols=255  Identities=26%  Similarity=0.408  Sum_probs=215.5

Q ss_pred             ccceeeccc-ccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            9 TDEYEVTDI-LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         9 ~~~Y~~~~~-lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      .++|.+.+. ||+|+||+||+|.++..+++..||||++++...                           ......+.+|
T Consensus         7 ~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~---------------------------~~~~~~~~~E   59 (285)
T d1u59a_           7 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE---------------------------KADTEEMMRE   59 (285)
T ss_dssp             GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCC---------------------------HHHHHHHHHH
T ss_pred             ccCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcC---------------------------HHHHHHHHHH
Confidence            367888885 999999999999987655667899999864221                           1223568899


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQANIVHR  166 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~al~~lH~~~i~H~  166 (521)
                      +.+++++     +|||||++++++.+ +.+|||||||+||+|.+++.. ...+++..+..++.||+.||.|||++||+||
T Consensus        60 ~~il~~l-----~HpnIv~l~g~~~~-~~~~lvmE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHr  133 (285)
T d1u59a_          60 AQIMHQL-----DNPYIVRLIGVCQA-EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHR  133 (285)
T ss_dssp             HHHHHHC-----CCTTBCCEEEEEES-SSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred             HHHHHhC-----CCCCEeeEeeeecc-CeEEEEEEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence            9999999     99999999999875 468999999999999998765 4679999999999999999999999999999


Q ss_pred             cCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC----cccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CC
Q 009980          167 DLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP----VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GY  241 (521)
Q Consensus       167 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~  241 (521)
                      ||||+|||+   +.++.+||+|||+|+.......    .....||+.|+|||++.++.++.++||||+||++|+|+| |.
T Consensus       134 DlKp~Nill---~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~  210 (285)
T d1u59a_         134 DLAARNVLL---VNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQ  210 (285)
T ss_dssp             CCSGGGEEE---EETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSC
T ss_pred             cCchhheee---ccCCceeeccchhhhcccccccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCC
Confidence            999999999   5677899999999986543322    234468999999999999999999999999999999998 99


Q ss_pred             CCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHH---HcCCcc
Q 009980          242 PPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQEL---LNHPWV  302 (521)
Q Consensus       242 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~---l~h~~~  302 (521)
                      +||.+.+..+....+..+.....   ++.+|+++.+||.+||..||++|||+.++   |+|+|+
T Consensus       211 ~Pf~~~~~~~~~~~i~~~~~~~~---p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~  271 (285)
T d1u59a_         211 KPYKKMKGPEVMAFIEQGKRMEC---PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYY  271 (285)
T ss_dssp             CTTTTCCTHHHHHHHHTTCCCCC---CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHcCCCCCC---CCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            99999988888888887754322   35689999999999999999999999888   456665

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.2e-54  Score=408.85  Aligned_cols=254  Identities=27%  Similarity=0.444  Sum_probs=207.2

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      +.-.++|++++.||+|+||+||+|+.+.     .||||+++......                          .....+.
T Consensus         4 ei~~~~~~~~~~lG~G~fg~Vy~~~~~~-----~vAvK~~~~~~~~~--------------------------~~~~~~~   52 (276)
T d1uwha_           4 EIPDGQITVGQRIGSGSFGTVYKGKWHG-----DVAVKMLNVTAPTP--------------------------QQLQAFK   52 (276)
T ss_dssp             BCCTTCCCCCSEEEECSSCEEEEEESSS-----EEEEEECCCSSCCT--------------------------THHHHHH
T ss_pred             ccccccEEEEEEEeeCCCcEEEEEEECC-----EEEEEEEEcccCCH--------------------------HHHHHHH
Confidence            3346789999999999999999997542     49999986543221                          2235688


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQANIV  164 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~~~i~  164 (521)
                      +|+.+++++     +|||||++++++. .+.+|||||||+||+|.+++... ..+++..+..++.||+.||.|||++||+
T Consensus        53 ~E~~~l~~l-----~HpnIv~~~~~~~-~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~iv  126 (276)
T d1uwha_          53 NEVGVLRKT-----RHVNILLFMGYST-APQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSII  126 (276)
T ss_dssp             HHHHHHTTC-----CCTTBCCEEEEEC-SSSCEEEEECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHhC-----CCCCEeeeeEEEe-ccEEEEEEecCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcCCEe
Confidence            999999998     9999999999864 55689999999999999999754 5699999999999999999999999999


Q ss_pred             eccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC---CcccccCCccccccccccc---CCCCchhhhHHHHHHHHHHH
Q 009980          165 HRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD---PVVGLFGSIDYVSPEALLQ---DRITSKSDMWSLGVILYILL  238 (521)
Q Consensus       165 H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwslG~il~~ll  238 (521)
                      ||||||+|||+   +.++.+||+|||+|+......   ......||+.|||||++.+   ..|+.++||||+||++|+|+
T Consensus       127 HrDlKp~NiLl---~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~  203 (276)
T d1uwha_         127 HRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM  203 (276)
T ss_dssp             CSCCCGGGEEE---ETTSSEEECCCCCSCC------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHH
T ss_pred             ccccCHHHEEE---cCCCCEEEccccceeeccccCCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHH
Confidence            99999999999   678899999999998654322   2345679999999999864   35899999999999999999


Q ss_pred             hCCCCCCCCCcHHHHHH-HHcCCCCC-chhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          239 SGYPPFIAQSNRQKQQM-IMAGEFSF-YEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       239 ~g~~pf~~~~~~~~~~~-i~~~~~~~-~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      ||+.||.+.+....... +..+...+ ....+.++|+++++|+.+||..||.+|||+.+++++
T Consensus       204 tg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~  266 (276)
T d1uwha_         204 TGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILAS  266 (276)
T ss_dssp             HSSCTTTTCCCHHHHHHHHHHTSCCCCGGGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HCCCCCCCCChHHHHHHHHhcCCCCCcchhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            99999988776654444 44443322 233456789999999999999999999999999975

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.1e-54  Score=405.80  Aligned_cols=247  Identities=30%  Similarity=0.464  Sum_probs=207.2

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ++|++.+.||+|+||+||+|+++   +++.||||++++..                             .....+.+|+.
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~---~~~~vAvK~i~~~~-----------------------------~~~~~~~~E~~   52 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWL---NKDKVAIKTIREGA-----------------------------MSEEDFIEEAE   52 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEET---TTEEEEEEECCSSS-----------------------------SCHHHHHHHHH
T ss_pred             HHcEEEEEEeeCCCeEEEEEEEC---CCCEEEEEEECCCc-----------------------------CcHHHHHHHHH
Confidence            58999999999999999999986   45689999986422                             12456899999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQANIVHRDL  168 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~~~i~H~dl  168 (521)
                      +++++     +||||+++++++.+++.+|+|||||++|+|.+++... ..+++..+..++.||+.||.|||+++|+||||
T Consensus        53 ~l~~l-----~HpnIv~~~g~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDl  127 (263)
T d1sm2a_          53 VMMKL-----SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDL  127 (263)
T ss_dssp             HHHHC-----CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTC
T ss_pred             HHHhc-----CCCCcccccceeccCCceEEEEEecCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhccceeeccc
Confidence            99999     9999999999999999999999999999999988754 56889999999999999999999999999999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCccCCCCCC--cccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CCCCCC
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSSVEGYTDP--VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFI  245 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~pf~  245 (521)
                      ||+|||+   +.++.+||+|||+|+.......  .....||+.|+|||++.+..|+.++||||+||++|+|+| |.+||.
T Consensus       128 Kp~Nill---~~~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~  204 (263)
T d1sm2a_         128 AARNCLV---GENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE  204 (263)
T ss_dssp             SGGGEEE---CGGGCEEECSCC------------------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTC
T ss_pred             chhheee---cCCCCeEecccchheeccCCCceeecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCC
Confidence            9999999   7788999999999986543322  234568999999999999999999999999999999999 678888


Q ss_pred             CCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          246 AQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       246 ~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      ..+..+....+..+.....   +..+|+++.+|+.+||..||++|||++++++|
T Consensus       205 ~~~~~~~~~~i~~~~~~~~---p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~  255 (263)
T d1sm2a_         205 NRSNSEVVEDISTGFRLYK---PRLASTHVYQIMNHCWKERPEDRPAFSRLLRQ  255 (263)
T ss_dssp             SCCHHHHHHHHHHTCCCCC---CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCHHHHHHHHHhcCCCCC---ccccCHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence            8888888888877654332   25679999999999999999999999999975

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-53  Score=401.77  Aligned_cols=247  Identities=26%  Similarity=0.438  Sum_probs=219.0

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ++|++++.||+|+||+||+|+++   +++.||||++++...                             ....+.+|+.
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~~---~~~~vAvK~l~~~~~-----------------------------~~~~~~~Ev~   51 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKWR---GQYDVAIKMIKEGSM-----------------------------SEDEFIEEAK   51 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEET---TTEEEEEEEEESSSS-----------------------------CHHHHHHHHH
T ss_pred             HHCEEeEEEecCCCeEEEEEEEC---CCCEEEEEEECcCcC-----------------------------CHHHHHHHHH
Confidence            68999999999999999999986   577899999975322                             2456899999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccC
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQANIVHRDL  168 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dl  168 (521)
                      +++++     +||||+++++++.+++.+|+||||+++|+|.+++.. ...+++..+..++.||+.||.|||++||+||||
T Consensus        52 ~~~~l-----~HpnIv~~~g~~~~~~~~~iv~Ey~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dl  126 (258)
T d1k2pa_          52 VMMNL-----SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDL  126 (258)
T ss_dssp             HHHTC-----CCTTBCCEEEEECCSSSEEEEEECCTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCC
T ss_pred             HHHhc-----CCCceeeEEEEEeeCCceEEEEEccCCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhcCcccccc
Confidence            99998     999999999999999999999999999999988654 467899999999999999999999999999999


Q ss_pred             CCCcEEEeeCCCCCCEEEeecCCCccCCCCC--CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CCCCCC
Q 009980          169 KPENCLFLNDREDSPLKIMDFGLSSVEGYTD--PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPPFI  245 (521)
Q Consensus       169 kp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~pf~  245 (521)
                      ||+|||+   +.++.+||+|||+|+......  ......||+.|+|||++.+..|+.++||||+||++|+|+| |+.||.
T Consensus       127 k~~Nill---~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~  203 (258)
T d1k2pa_         127 AARNCLV---NDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE  203 (258)
T ss_dssp             SGGGEEE---CTTCCEEECCCSSCCBCSSSSCCCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTT
T ss_pred             cceeEEE---cCCCcEEECcchhheeccCCCceeecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCC
Confidence            9999999   778899999999997654332  2234578999999999999999999999999999999998 899999


Q ss_pred             CCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          246 AQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       246 ~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      +.+..++...+..+.....   +..+|+++++||.+||+.||++|||++++++|
T Consensus       204 ~~~~~~~~~~i~~~~~~~~---p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~  254 (258)
T d1k2pa_         204 RFTNSETAEHIAQGLRLYR---PHLASEKVYTIMYSCWHEKADERPTFKILLSN  254 (258)
T ss_dssp             TSCHHHHHHHHHTTCCCCC---CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             CCCHHHHHHHHHhCCCCCC---cccccHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence            9999999988888654332   35689999999999999999999999999987

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-53  Score=416.09  Aligned_cols=262  Identities=23%  Similarity=0.371  Sum_probs=215.4

Q ss_pred             ccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEI   88 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   88 (521)
                      .++|++++.||+|+||+||+|+++.  +++.||||++.+.....                          .....+.+|+
T Consensus         9 ~~rY~i~~~LG~G~fg~Vy~a~~~~--~~~~vAvK~i~~~~~~~--------------------------~~~~~~~~E~   60 (318)
T d3blha1           9 VSKYEKLAKIGQGTFGEVFKARHRK--TGQKVALKKVLMENEKE--------------------------GFPITALREI   60 (318)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETT--TCCEEEEEEC----CTT--------------------------SSCHHHHHHH
T ss_pred             cCCEEEEEEEecCcCeEEEEEEECC--CCCEEEEEEEehhhcch--------------------------HHHHHHHHHH
Confidence            5899999999999999999999987  88999999986543221                          1234578999


Q ss_pred             HHHHHHhhccCCCCCccceeEEEEe--------CCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Q 009980           89 LVMRKIVENVSPHPNVIDLYDVYED--------QNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ  160 (521)
Q Consensus        89 ~~l~~l~~~~~~hpniv~~~~~~~~--------~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~  160 (521)
                      .+|+++     +||||+++++++..        .+.+|+|||||.++.+.........+++..++.++.||+.||.|||+
T Consensus        61 ~il~~l-----~h~nii~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~  135 (318)
T d3blha1          61 KILQLL-----KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHR  135 (318)
T ss_dssp             HHHHHC-----CCTTBCCEEEEEEC----------CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHh-----cCCCccceEeeeecccccccccCceEEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhcc
Confidence            999999     99999999999855        45689999999888776666667789999999999999999999999


Q ss_pred             CCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCC-----CCcccccCCcccccccccccC-CCCchhhhHHHHHHH
Q 009980          161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYT-----DPVVGLFGSIDYVSPEALLQD-RITSKSDMWSLGVIL  234 (521)
Q Consensus       161 ~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il  234 (521)
                      +||+||||||+|||+   +.++.+||+|||+|+.....     ....+.+||+.|+|||++.+. .|+.++||||+||++
T Consensus       136 ~~ivHrDlKp~NILl---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil  212 (318)
T d3blha1         136 NKILHRDMKAANVLI---TRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIM  212 (318)
T ss_dssp             TTEECCCCCGGGEEE---CTTSCEEECCCTTCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHH
T ss_pred             CCEEecCcCchheee---cCCCcEEeeecceeeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCcee
Confidence            999999999999999   77889999999999754321     223445799999999998755 689999999999999


Q ss_pred             HHHHhCCCCCCCCCcHHHHHHHHcCCCCCchhhh----------------------------hccCHHHHHHHHHhccCC
Q 009980          235 YILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTW----------------------------KNISSSAKQLISSLLTVD  286 (521)
Q Consensus       235 ~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~----------------------------~~~s~~~~~li~~~l~~d  286 (521)
                      |+|++|++||.+.+.......+......+....+                            ...++++++||.+||++|
T Consensus       213 ~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~d  292 (318)
T d3blha1         213 AEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLD  292 (318)
T ss_dssp             HHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSS
T ss_pred             eeHhhCCCCCCCCCHHHHHHHHHHhcCCCChhhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCC
Confidence            9999999999988877776666543332222111                            124788999999999999


Q ss_pred             CCCCCCHHHHHcCCcccCCC
Q 009980          287 PNRRPSAQELLNHPWVIGDS  306 (521)
Q Consensus       287 p~~R~t~~~~l~h~~~~~~~  306 (521)
                      |++|||++|+|+||||+...
T Consensus       293 P~~R~sa~elL~Hpff~~~p  312 (318)
T d3blha1         293 PAQRIDSDDALNHDFFWSDP  312 (318)
T ss_dssp             TTTSCCHHHHHHSGGGSSSS
T ss_pred             hhHCcCHHHHHcChhhccCC
Confidence            99999999999999998643

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.1e-54  Score=418.98  Aligned_cols=254  Identities=24%  Similarity=0.371  Sum_probs=213.8

Q ss_pred             cceeecccccccCceEEEEeEEccCC---CcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCG---ETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      ++|++++.||+|+||+||+|+++..+   ....||+|.+......                           .....+.+
T Consensus        37 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~---------------------------~~~~~~~~   89 (325)
T d1rjba_          37 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADS---------------------------SEREALMS   89 (325)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC---------------------------------CHHHHH
T ss_pred             HHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCH---------------------------HHHHHHHH
Confidence            78999999999999999999987521   2346999998643211                           12345788


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC-----------------------CCCHHH
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE-----------------------RYMEVG  143 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-----------------------~~~~~~  143 (521)
                      |+.++.++    .+|||||++++++.+++.+|+|||||+||+|.+++....                       .+++..
T Consensus        90 E~~~l~~l----~~HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  165 (325)
T d1rjba_          90 ELKMMTQL----GSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFED  165 (325)
T ss_dssp             HHHHHHHH----CCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHH
T ss_pred             HHHHHHHh----cCCCcEeEEEEEEeeCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHH
Confidence            99999887    479999999999999999999999999999999997542                       488999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC---cccccCCcccccccccccCC
Q 009980          144 AAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALLQDR  220 (521)
Q Consensus       144 ~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~  220 (521)
                      +..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|+.......   .....||+.|||||++.++.
T Consensus       166 ~~~i~~qi~~gl~yLH~~~IiHRDlKp~Nill---~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~  242 (325)
T d1rjba_         166 LLCFAYQVAKGMEFLEFKSCVHRDLAARNVLV---THGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGI  242 (325)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEEETTCSGGGEEE---ETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHHhCCeeeccCchhcccc---ccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCC
Confidence            99999999999999999999999999999999   7778999999999986543322   23456899999999999999


Q ss_pred             CCchhhhHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          221 ITSKSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       221 ~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      |+.++||||+||++|+|+| |.+||.+.+..+....+......++.  +..+|+++++||.+||+.||++|||++++++|
T Consensus       243 ~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~~~~~~~~~~~~~~~--p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~  320 (325)
T d1rjba_         243 YTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQ--PFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF  320 (325)
T ss_dssp             CCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCcceeccchhHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCC--CCcCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            9999999999999999998 89999987776666666665544332  35689999999999999999999999999986

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-53  Score=421.47  Aligned_cols=263  Identities=28%  Similarity=0.414  Sum_probs=213.2

Q ss_pred             ccccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHH
Q 009980            3 QETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDA   82 (521)
Q Consensus         3 ~~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (521)
                      ++.-.+.++|++++.||+|+||+||+|+++.  +++.||||++++....                          .....
T Consensus        11 ~~~~~~~~~Y~~i~~lG~G~fg~V~~~~~~~--~~~~vAiK~i~~~~~~--------------------------~~~~~   62 (346)
T d1cm8a_          11 KTAWEVRAVYRDLQPVGSGAYGAVCSAVDGR--TGAKVAIKKLYRPFQS--------------------------ELFAK   62 (346)
T ss_dssp             SSEECCBSSEEEEEEC------CEEEEEETT--TCCEEEEEECSSTTSS--------------------------HHHHH
T ss_pred             CceeecCCcEEEEEEEecCCCeEEEEEEECC--CCCEEEEEEEchhhcC--------------------------hHHHH
Confidence            3334588999999999999999999999988  7899999999653221                          12234


Q ss_pred             HHHHHHHHHHHHhhccCCCCCccceeEEEEeCC------eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 009980           83 LLTNEILVMRKIVENVSPHPNVIDLYDVYEDQN------GVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLA  156 (521)
Q Consensus        83 ~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~------~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~  156 (521)
                      .+.+|+.+|+++     +|||||+++++|...+      .+|+||||| |.+|...+ +.+++++..++.++.||+.||.
T Consensus        63 ~~~~Ei~il~~l-----~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~-~~~~l~~~~~~~~~~qi~~aL~  135 (346)
T d1cm8a_          63 RAYRELRLLKHM-----RHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLM-KHEKLGEDRIQFLVYQMLKGLR  135 (346)
T ss_dssp             HHHHHHHHHHHC-----CBTTBCCCSEEECSCSSTTTCCCCEEEEECC-SEEHHHHH-HHCCCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhc-----CCCCeeEEEEEeccCccccccceEEEEEecc-cccHHHHH-HhccccHHHHHHHHHHHHHHHH
Confidence            578999999998     9999999999997664      579999999 65666655 4568999999999999999999


Q ss_pred             HHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccC-CCCchhhhHHHHHHHH
Q 009980          157 ALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQD-RITSKSDMWSLGVILY  235 (521)
Q Consensus       157 ~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~  235 (521)
                      |||++||+||||||+|||+   +.++.+|++|||+|+....  ......||+.|+|||++.+. .++.++||||+||++|
T Consensus       136 ~LH~~~IiHrDiKp~NIL~---~~~~~~kl~Dfg~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~  210 (346)
T d1cm8a_         136 YIHAAGIIHRDLKPGNLAV---NEDCELKILDFGLARQADS--EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMA  210 (346)
T ss_dssp             HHHHTTEECCCCCGGGEEE---CTTCCEEECCCTTCEECCS--SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHH
T ss_pred             HHHhCCCcccccCcchhhc---ccccccccccccceeccCC--ccccccccccccCHHHHcCCCCCCccchhhcchHHHH
Confidence            9999999999999999999   7889999999999987543  34556799999999998764 5689999999999999


Q ss_pred             HHHhCCCCCCCCCcHHHHHHHHcCCCCCc---------------------------hhhhhccCHHHHHHHHHhccCCCC
Q 009980          236 ILLSGYPPFIAQSNRQKQQMIMAGEFSFY---------------------------EQTWKNISSSAKQLISSLLTVDPN  288 (521)
Q Consensus       236 ~ll~g~~pf~~~~~~~~~~~i~~~~~~~~---------------------------~~~~~~~s~~~~~li~~~l~~dp~  288 (521)
                      +|++|++||.+.+.......+......++                           .....++|+++++||.+||..||.
T Consensus       211 ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~  290 (346)
T d1cm8a_         211 EMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAE  290 (346)
T ss_dssp             HHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTT
T ss_pred             HHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChh
Confidence            99999999988877666554433222111                           122346789999999999999999


Q ss_pred             CCCCHHHHHcCCcccCC
Q 009980          289 RRPSAQELLNHPWVIGD  305 (521)
Q Consensus       289 ~R~t~~~~l~h~~~~~~  305 (521)
                      +|||+.|+|+||||+..
T Consensus       291 ~R~ta~eiL~Hp~f~~~  307 (346)
T d1cm8a_         291 QRVTAGEALAHPYFESL  307 (346)
T ss_dssp             TSCCHHHHHHSGGGTTT
T ss_pred             HCcCHHHHhcChhhCcC
Confidence            99999999999999853

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-53  Score=420.78  Aligned_cols=254  Identities=27%  Similarity=0.322  Sum_probs=211.5

Q ss_pred             ccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEI   88 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   88 (521)
                      .-+|+..++||+|+||+||+|+++.  +++.||||++.+...                                ...+|+
T Consensus        19 ~~~Y~~~k~LG~G~fg~Vy~a~~~~--~~~~vAiK~i~~~~~--------------------------------~~~~Ei   64 (350)
T d1q5ka_          19 EVSYTDTKVIGNGSFGVVYQAKLCD--SGELVAIKKVLQDKR--------------------------------FKNREL   64 (350)
T ss_dssp             EEEEEEEEEEEEETTEEEEEEEETT--TCCEEEEEEEECCSS--------------------------------SCCHHH
T ss_pred             cCCcEeeeEEeeCcCeEEEEEEECC--CCCEEEEEEECccch--------------------------------HHHHHH
Confidence            4479999999999999999999998  889999999975321                                123799


Q ss_pred             HHHHHHhhccCCCCCccceeEEEEeC------CeEEEEEeccCCCchHH---HHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 009980           89 LVMRKIVENVSPHPNVIDLYDVYEDQ------NGVHLILELCSGGELFD---RIVAQERYMEVGAAAVIRQIAEGLAALH  159 (521)
Q Consensus        89 ~~l~~l~~~~~~hpniv~~~~~~~~~------~~~~lv~e~~~gg~L~~---~l~~~~~~~~~~~~~i~~qil~al~~lH  159 (521)
                      .+|+++     +||||++++++|...      .++|||||||.++.+..   .......+++.+++.++.||+.||.|||
T Consensus        65 ~il~~l-----~h~niv~~~~~~~~~~~~~~~~~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH  139 (350)
T d1q5ka_          65 QIMRKL-----DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH  139 (350)
T ss_dssp             HHHHHC-----CCTTBCCEEEEEEEC--CCSCCEEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhc-----CCCCCCcEEEEEEecCccCCceEEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence            999998     999999999998543      35899999998764332   2334567999999999999999999999


Q ss_pred             HCCCeeccCCCCcEEEeeCCCC-CCEEEeecCCCccCCCCCCcccccCCccccccccccc-CCCCchhhhHHHHHHHHHH
Q 009980          160 QANIVHRDLKPENCLFLNDRED-SPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQ-DRITSKSDMWSLGVILYIL  237 (521)
Q Consensus       160 ~~~i~H~dlkp~Nil~~~~~~~-~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~~l  237 (521)
                      ++||+||||||+|||+   +.+ ..+||+|||+|+...........+||+.|+|||.+.+ ..|+.++||||+||++|+|
T Consensus       140 ~~~IiHrDiKp~NILl---~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el  216 (350)
T d1q5ka_         140 SFGICHRDIKPQNLLL---DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL  216 (350)
T ss_dssp             TTTEECCCCCGGGEEE---CTTTCCEEECCCTTCEECCTTSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHH
T ss_pred             hcCCcccCCCcceEEE---ecCCCceeEecccchhhccCCcccccccccccccChHHhhcccCCCcceeecccceEEEeh
Confidence            9999999999999999   544 4899999999987766666667789999999998765 4689999999999999999


Q ss_pred             HhCCCCCCCCCcHHHHHHHHcCCCCC-------------------------chhhhhccCHHHHHHHHHhccCCCCCCCC
Q 009980          238 LSGYPPFIAQSNRQKQQMIMAGEFSF-------------------------YEQTWKNISSSAKQLISSLLTVDPNRRPS  292 (521)
Q Consensus       238 l~g~~pf~~~~~~~~~~~i~~~~~~~-------------------------~~~~~~~~s~~~~~li~~~l~~dp~~R~t  292 (521)
                      ++|++||.+.+..+....+.......                         .......+|+++++||.+||..||.+|||
T Consensus       217 ~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t  296 (350)
T d1q5ka_         217 LLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT  296 (350)
T ss_dssp             HHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCC
T ss_pred             hhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcC
Confidence            99999999888777666554311110                         11122457999999999999999999999


Q ss_pred             HHHHHcCCcccC
Q 009980          293 AQELLNHPWVIG  304 (521)
Q Consensus       293 ~~~~l~h~~~~~  304 (521)
                      +.|+|+||||..
T Consensus       297 a~e~L~Hp~f~~  308 (350)
T d1q5ka_         297 PLEACAHSFFDE  308 (350)
T ss_dssp             HHHHHTSGGGGG
T ss_pred             HHHHhcCHhhcc
Confidence            999999999975

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.6e-53  Score=410.03  Aligned_cols=253  Identities=28%  Similarity=0.375  Sum_probs=207.2

Q ss_pred             ccceeecccccccCceEEEEeEEccCC-CcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTCG-ETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      .++|++.+.||+|+||+||+|+++.++ ....||||.+.....                           ......+.+|
T Consensus        25 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~---------------------------~~~~~~~~~E   77 (299)
T d1jpaa_          25 ISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYT---------------------------EKQRRDFLSE   77 (299)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCC---------------------------HHHHHHHHHH
T ss_pred             hhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccC---------------------------HHHHHHHHHH
Confidence            478999999999999999999998632 223588888754211                           1223458899


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQANIVHR  166 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~~~i~H~  166 (521)
                      +.+|+++     +|||||++++++.+++.+|+|||||+||+|.+++... +.+++.++..++.||+.||.|||++||+||
T Consensus        78 ~~~l~~l-----~HpnIv~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHr  152 (299)
T d1jpaa_          78 ASIMGQF-----DHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHR  152 (299)
T ss_dssp             HHHHTTC-----CCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred             HHHHHhC-----CCCCCccEEEEEeeCCEEEEEEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhCCCccC
Confidence            9999998     9999999999999999999999999999999988764 579999999999999999999999999999


Q ss_pred             cCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC------cccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-
Q 009980          167 DLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP------VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-  239 (521)
Q Consensus       167 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-  239 (521)
                      ||||+|||+   +.++.+||+|||+|+.......      .....||+.|+|||.+.++.|+.++|||||||++|+|+| 
T Consensus       153 DlKp~NILl---~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~  229 (299)
T d1jpaa_         153 DLAARNILV---NSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSY  229 (299)
T ss_dssp             CCCGGGEEE---CTTCCEEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTT
T ss_pred             ccccceEEE---CCCCcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhC
Confidence            999999999   7888999999999986543221      122457999999999999999999999999999999998 


Q ss_pred             CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          240 GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       240 g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      |.+||.+.+..+....+..+.....   +..+|+++.+|+.+||+.||.+|||+.+++++
T Consensus       230 g~~Pf~~~~~~~~~~~i~~~~~~~~---~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~  286 (299)
T d1jpaa_         230 GERPYWDMTNQDVINAIEQDYRLPP---PMDCPSALHQLMLDCWQKDRNHRPKFGQIVNT  286 (299)
T ss_dssp             SCCTTTTCCHHHHHHHHHTTCCCCC---CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHcCCCCCC---CccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            8999999998888888877643322   35689999999999999999999999999863

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.8e-54  Score=406.22  Aligned_cols=253  Identities=26%  Similarity=0.384  Sum_probs=215.9

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      .-.++|++.+.||+|+||+||+|+++   +++.||||+++...                             .....+.+
T Consensus        10 i~~~~~~~~~~iG~G~fg~Vy~~~~~---~~~~vAvK~~~~~~-----------------------------~~~~~~~~   57 (272)
T d1qpca_          10 VPRETLKLVERLGAGQFGEVWMGYYN---GHTKVAVKSLKQGS-----------------------------MSPDAFLA   57 (272)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEET---TTEEEEEEEECTTS-----------------------------SCHHHHHH
T ss_pred             cCHHHeEEeEEEecCCCcEEEEEEEC---CCCEEEEEEEccCc-----------------------------CCHHHHHH
Confidence            44579999999999999999999986   46789999986422                             12346899


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ--ERYMEVGAAAVIRQIAEGLAALHQANIV  164 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qil~al~~lH~~~i~  164 (521)
                      |+.+++++     +|||||++++++. ++.+|+|||||++|+|.+++...  ..+++..+..|+.||+.||.|||++||+
T Consensus        58 E~~~l~~l-----~HpnIv~~~g~~~-~~~~~iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~iv  131 (272)
T d1qpca_          58 EANLMKQL-----QHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYI  131 (272)
T ss_dssp             HHHHHHHC-----CCTTBCCEEEEEC-SSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHhC-----CCCCEeEEEeeec-cCCeEEEEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence            99999999     9999999999875 45679999999999999877543  3599999999999999999999999999


Q ss_pred             eccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC--CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CC
Q 009980          165 HRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD--PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GY  241 (521)
Q Consensus       165 H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~  241 (521)
                      ||||||+|||+   +.++.+||+|||+|+......  ......||+.|+|||++.++.|+.++||||+||++|+|+| |.
T Consensus       132 HrDiKp~NIll---~~~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~  208 (272)
T d1qpca_         132 HRDLRAANILV---SDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR  208 (272)
T ss_dssp             CSCCSGGGEEE---CTTSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTC
T ss_pred             cCccchhheee---ecccceeeccccceEEccCCccccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCC
Confidence            99999999999   788999999999998754332  2334578999999999998899999999999999999999 56


Q ss_pred             CCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc--CCccc
Q 009980          242 PPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN--HPWVI  303 (521)
Q Consensus       242 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~--h~~~~  303 (521)
                      +||...+..+....+..+.....   +..+|+++++|+.+||+.||++|||++++++  |+||.
T Consensus       209 ~~~~~~~~~~~~~~i~~~~~~~~---p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~ft  269 (272)
T d1qpca_         209 IPYPGMTNPEVIQNLERGYRMVR---PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT  269 (272)
T ss_dssp             CSSTTCCHHHHHHHHHTTCCCCC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHhcCCCCC---cccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhhh
Confidence            67777777778888877644332   2568999999999999999999999999998  77774

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-53  Score=415.39  Aligned_cols=265  Identities=28%  Similarity=0.441  Sum_probs=220.2

Q ss_pred             ccceeecccccccCceEEEEeEEcc-CCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKT-CGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~-~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      .++|++++.||+|+||+||+|++.. ..+++.||||++++.....                        .......+.+|
T Consensus        23 l~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~------------------------~~~~~~~~~~E   78 (322)
T d1vzoa_          23 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQ------------------------KAKTTEHTRTE   78 (322)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEE------------------------EESSGGGCCCH
T ss_pred             hhceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhcc------------------------chHHHHHHHHH
Confidence            4789999999999999999999854 2368899999997543211                        01122346789


Q ss_pred             HHHHHHHhhccCCC-CCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 009980           88 ILVMRKIVENVSPH-PNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHR  166 (521)
Q Consensus        88 ~~~l~~l~~~~~~h-pniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~  166 (521)
                      +.+++++     +| |||+++++++++...+|+||||+.||+|.+++...+.+++..+..++.||+.||.|||++||+||
T Consensus        79 ~~il~~l-----~h~pnIv~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~~ivHr  153 (322)
T d1vzoa_          79 RQVLEHI-----RQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYR  153 (322)
T ss_dssp             HHHHHHH-----HTCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred             HHHHHhc-----cCCCeEEEeeeeeccCCceeeeeecccccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhhcCCEEec
Confidence            9999999     55 89999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCcEEEeeCCCCCCEEEeecCCCccCCCC--CCcccccCCcccccccccccC--CCCchhhhHHHHHHHHHHHhCCC
Q 009980          167 DLKPENCLFLNDREDSPLKIMDFGLSSVEGYT--DPVVGLFGSIDYVSPEALLQD--RITSKSDMWSLGVILYILLSGYP  242 (521)
Q Consensus       167 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~~ll~g~~  242 (521)
                      ||||+|||+   +.++.+||+|||+|+.....  .......|++.|+|||.+.+.  .++.++|||||||++|+|++|..
T Consensus       154 DiKp~Nill---~~~~~vkL~DFG~a~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~  230 (322)
T d1vzoa_         154 DIKLENILL---DSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGAS  230 (322)
T ss_dssp             CCCGGGEEE---CTTSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSC
T ss_pred             cCCccceee---cCCCCEEEeeccchhhhcccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCC
Confidence            999999999   77889999999999764332  223456799999999999754  46889999999999999999999


Q ss_pred             CCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCC-----CHHHHHcCCcccCC
Q 009980          243 PFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRP-----SAQELLNHPWVIGD  305 (521)
Q Consensus       243 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~-----t~~~~l~h~~~~~~  305 (521)
                      ||.+.+.......+..+......+.+..+|+++++||.+||.+||.+||     |++|+|+||||++.
T Consensus       231 PF~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~Hpff~~i  298 (322)
T d1vzoa_         231 PFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKI  298 (322)
T ss_dssp             TTSCTTSCCCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTC
T ss_pred             CCCCCCHHHHHHHHHHhcccCCCCCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcCHhhcCC
Confidence            9988766555444444333223333356899999999999999999999     58999999999753

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-53  Score=418.98  Aligned_cols=260  Identities=26%  Similarity=0.382  Sum_probs=205.3

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      -.+.++|+++++||+|+||+||+|+++.  +++.||||++++.....                          .....+.
T Consensus        13 f~i~~~Y~i~~~LG~G~fg~V~~~~d~~--t~~~vAvK~i~~~~~~~--------------------------~~~~~~~   64 (355)
T d2b1pa1          13 FTVLKRYQNLKPIGSGAQGIVCAAYDAV--LDRNVAIKKLSRPFQNQ--------------------------THAKRAY   64 (355)
T ss_dssp             EEEETTEEEEEECSCC--CEEEEEEETT--TTEEEEEEEEESTTSSH--------------------------HHHHHHH
T ss_pred             eeecCCeEEEEEeecCcCeEEEEEEECC--CCCEEEEEEEChhhcCH--------------------------HHHHHHH
Confidence            3466899999999999999999999998  88999999997643211                          1234578


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEe------CCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYED------QNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALH  159 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~------~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH  159 (521)
                      +|+.+++++     +||||++++++|..      ...+|+|||||.|+.+ +.+  ...+++..++.++.||+.||.|||
T Consensus        65 ~Ei~il~~l-----~hpnIv~~~~~f~~~~~~~~~~~~~iv~Ey~~~~l~-~~~--~~~~~~~~i~~~~~qil~gl~~LH  136 (355)
T d2b1pa1          65 RELVLMKCV-----NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLC-QVI--QMELDHERMSYLLYQMLCGIKHLH  136 (355)
T ss_dssp             HHHHHHHHC-----CCTTBCCCSEEECSCCSTTTCCEEEEEEECCSEEHH-HHH--TSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhc-----CCCCeeEEEEEEecccccccCceeEEEEeccchHHH-Hhh--hcCCCHHHHHHHHHHHHHHHHHhh
Confidence            999999998     99999999999963      4689999999977544 444  357999999999999999999999


Q ss_pred             HCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh
Q 009980          160 QANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS  239 (521)
Q Consensus       160 ~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~  239 (521)
                      ++||+||||||+|||+   +.++.+|++|||+++...........+||+.|+|||++.+..+++++||||+||++|+|++
T Consensus       137 ~~giiHrDlKP~Nil~---~~~~~~kl~df~~~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~  213 (355)
T d2b1pa1         137 SAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR  213 (355)
T ss_dssp             HTTCCCSCCCGGGEEE---CTTCCEEECCCCC---------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHH
T ss_pred             hcccccccCCcccccc---ccccceeeechhhhhccccccccccccccccccChhhhcCCCCCCCcccccccchHHHHhh
Confidence            9999999999999999   7788899999999987766666667789999999999999999999999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHHcCCCCCc--------------------------------------hhhhhccCHHHHHHHHH
Q 009980          240 GYPPFIAQSNRQKQQMIMAGEFSFY--------------------------------------EQTWKNISSSAKQLISS  281 (521)
Q Consensus       240 g~~pf~~~~~~~~~~~i~~~~~~~~--------------------------------------~~~~~~~s~~~~~li~~  281 (521)
                      |++||.+.+.......+........                                      ...+..+|+++++||++
T Consensus       214 g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~  293 (355)
T d2b1pa1         214 HKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSK  293 (355)
T ss_dssp             SSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHH
Confidence            9999988876666555432211110                                      11123357889999999


Q ss_pred             hccCCCCCCCCHHHHHcCCcccC
Q 009980          282 LLTVDPNRRPSAQELLNHPWVIG  304 (521)
Q Consensus       282 ~l~~dp~~R~t~~~~l~h~~~~~  304 (521)
                      ||..||++||||+|+|+||||+.
T Consensus       294 mL~~dP~~R~ta~elL~Hpw~~~  316 (355)
T d2b1pa1         294 MLVIDPAKRISVDDALQHPYINV  316 (355)
T ss_dssp             HSCSSTTTSCCHHHHHTSTTTGG
T ss_pred             HCcCChhHCcCHHHHhcCcccCC
Confidence            99999999999999999999975

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=1e-52  Score=411.53  Aligned_cols=256  Identities=24%  Similarity=0.380  Sum_probs=211.3

Q ss_pred             cccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      ..++|++++.||+|+||+||+|+++.  +++.||||++++.                               ....+.+|
T Consensus        33 ~~d~y~i~~~LG~G~fg~V~~a~~~~--~~~~vAiK~i~~~-------------------------------~~~~~~~E   79 (328)
T d3bqca1          33 NQDDYQLVRKLGRGKYSEVFEAINIT--NNEKVVVKILKPV-------------------------------KKKKIKRE   79 (328)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETT--TTEEEEEEEECSS-------------------------------CHHHHHHH
T ss_pred             CCcCeEEEEEEecCcCeEEEEEEECC--CCCEEEEEEECHH-------------------------------HHHHHHHH
Confidence            35789999999999999999999988  8899999998641                               13457899


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEeC--CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYEDQ--NGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~~--~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      +.+|+++    ..||||++++++|...  ..+|+|||||.+++|...   .+.+++.+++.++.||+.||.|||++||+|
T Consensus        80 i~il~~l----~~hpnIv~~~~~~~~~~~~~~~~v~e~~~~~~L~~~---~~~l~e~~i~~i~~qil~aL~~LH~~gIvH  152 (328)
T d3bqca1          80 IKILENL----RGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQL---YQTLTDYDIRFYMYEILKALDYCHSMGIMH  152 (328)
T ss_dssp             HHHHHHH----TTSTTBCCEEEEEECTTTCSEEEEEECCCSCBGGGT---TTSCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             HHHHHhc----cCCCCCcEEEEEEEecCCCceeEEEeecCCCcHHHH---hcCCCHHHHHHHHHHHHHHHHHHhhccccc
Confidence            9999998    3599999999999854  579999999999999765   357999999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccC-CCCchhhhHHHHHHHHHHHhCCCCC
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQD-RITSKSDMWSLGVILYILLSGYPPF  244 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~~ll~g~~pf  244 (521)
                      |||||+|||+.  ..+..+||+|||+|+...........+||+.|+|||.+.+. .|+.++||||+||++|+|++|..||
T Consensus       153 rDiKp~NILi~--~~~~~vkl~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf  230 (328)
T d3bqca1         153 RDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF  230 (328)
T ss_dssp             CCCSGGGEEEE--TTTTEEEECCGGGCEECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSS
T ss_pred             ccccccceEEc--CCCCeeeecccccceeccCCCcccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCC
Confidence            99999999993  23446999999999877666666777899999999998765 4799999999999999999999999


Q ss_pred             CCCCcHHH-HHHHHc-------------CCCC--------------------CchhhhhccCHHHHHHHHHhccCCCCCC
Q 009980          245 IAQSNRQK-QQMIMA-------------GEFS--------------------FYEQTWKNISSSAKQLISSLLTVDPNRR  290 (521)
Q Consensus       245 ~~~~~~~~-~~~i~~-------------~~~~--------------------~~~~~~~~~s~~~~~li~~~l~~dp~~R  290 (521)
                      ........ ...+..             ....                    .....+..+|+++++||.+||.+||.+|
T Consensus       231 ~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R  310 (328)
T d3bqca1         231 FHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSR  310 (328)
T ss_dssp             SCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGS
T ss_pred             CCCchhHHHHHHHHHHHCCchhhhhhhhcccccCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHC
Confidence            76554321 111110             0000                    1112234589999999999999999999


Q ss_pred             CCHHHHHcCCcccCC
Q 009980          291 PSAQELLNHPWVIGD  305 (521)
Q Consensus       291 ~t~~~~l~h~~~~~~  305 (521)
                      ||++|+|+||||+.-
T Consensus       311 ~ta~e~L~Hp~F~~v  325 (328)
T d3bqca1         311 LTAREAMEHPYFYTV  325 (328)
T ss_dssp             CCHHHHHTSGGGTTS
T ss_pred             cCHHHHhcCcccCCC
Confidence            999999999999753

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-52  Score=412.71  Aligned_cols=262  Identities=26%  Similarity=0.405  Sum_probs=211.6

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      -.+.++|++++.||+|+||+||+|+++.  +++.||||++.+...                           ......+.
T Consensus         4 ~~i~~rY~~~~~LG~G~fg~Vy~~~~~~--~~~~vAvK~i~~~~~---------------------------~~~~~~~~   54 (345)
T d1pmea_           4 FDVGPRYTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEH---------------------------QTYCQRTL   54 (345)
T ss_dssp             CCCCTTEEEEEECC---CCCEEEEEETT--TCSEEEEEEECCTTC---------------------------HHHHHHHH
T ss_pred             cCcCCCeEEEEEEeeccCeEEEEEEECC--CCcEEEEEEEehhcC---------------------------hHHHHHHH
Confidence            3566899999999999999999999988  789999999964221                           12234578


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCC-----eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQN-----GVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ  160 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~-----~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~  160 (521)
                      +|+.+|+++     +||||+++++++....     .+|++ +|+.||+|.+++.. +.+++..++.++.||+.||.|||+
T Consensus        55 ~Ei~il~~l-----~hp~iv~~~~~~~~~~~~~~~~~~l~-~~~~~g~L~~~l~~-~~l~~~~i~~i~~qil~al~yLH~  127 (345)
T d1pmea_          55 REIKILLRF-----RHENIIGINDIIRAPTIEQMKDVYLV-THLMGADLYKLLKT-QHLSNDHICYFLYQILRGLKYIHS  127 (345)
T ss_dssp             HHHHHHHHC-----CCTTBCCCCEEECCSSTTTCCCEEEE-EECCCEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHc-----CCCCCCcEEEEEeeccccccceEEEE-EeecCCchhhhhhc-CCCCHHHHHHHHHHHHHHHHHHHH
Confidence            999999999     9999999999997653     34555 55668999999876 479999999999999999999999


Q ss_pred             CCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC----CcccccCCcccccccccc-cCCCCchhhhHHHHHHHH
Q 009980          161 ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD----PVVGLFGSIDYVSPEALL-QDRITSKSDMWSLGVILY  235 (521)
Q Consensus       161 ~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~  235 (521)
                      +||+||||||+|||+   +.++.+||+|||+|+......    .....+||+.|+|||++. ...|+.++||||+||++|
T Consensus       128 ~~iiHRDIKp~NILl---~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~  204 (345)
T d1pmea_         128 ANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILA  204 (345)
T ss_dssp             TTEECCCCCGGGEEE---CTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHH
T ss_pred             CCCcCCCCCcceEEE---CCCCCEEEcccCceeeccCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceeh
Confidence            999999999999999   778899999999997654322    234557999999999985 456789999999999999


Q ss_pred             HHHhCCCCCCCCCcHHHHHHHHcCCC---------------------------CCchhhhhccCHHHHHHHHHhccCCCC
Q 009980          236 ILLSGYPPFIAQSNRQKQQMIMAGEF---------------------------SFYEQTWKNISSSAKQLISSLLTVDPN  288 (521)
Q Consensus       236 ~ll~g~~pf~~~~~~~~~~~i~~~~~---------------------------~~~~~~~~~~s~~~~~li~~~l~~dp~  288 (521)
                      +|++|.+||.+.+.............                           ......+..+|+++++||.+||..||.
T Consensus       205 eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~  284 (345)
T d1pmea_         205 EMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPH  284 (345)
T ss_dssp             HHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTT
T ss_pred             HHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChh
Confidence            99999999988776555443322110                           111233457889999999999999999


Q ss_pred             CCCCHHHHHcCCcccCCC
Q 009980          289 RRPSAQELLNHPWVIGDS  306 (521)
Q Consensus       289 ~R~t~~~~l~h~~~~~~~  306 (521)
                      +|||++++|+||||....
T Consensus       285 ~R~ta~e~L~hpf~~~~~  302 (345)
T d1pmea_         285 KRIEVEQALAHPYLEQYY  302 (345)
T ss_dssp             TSCCHHHHHTSGGGTTTC
T ss_pred             HCcCHHHHhcCHhhccCC
Confidence            999999999999998544

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.1e-52  Score=401.77  Aligned_cols=260  Identities=23%  Similarity=0.366  Sum_probs=218.4

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ++|++++.||+|+||+||+|+++.  +++.||||+++......                          .....+.+|+.
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~--~~~~vAvK~i~~~~~~~--------------------------~~~~~~~~E~~   53 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRE--THEIVALKRVRLDDDDE--------------------------GVPSSALREIC   53 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETT--TCCEEEEEEEESSCSST--------------------------THHHHHHHHHH
T ss_pred             CCCEeeeEEecCcCeEEEEEEECC--CCcEEEEEEEehhhCCh--------------------------HHHHHHHHHHH
Confidence            689999999999999999999998  88999999997643221                          22456889999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCC
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLK  169 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlk  169 (521)
                      +++++     +||||+++++++.+....++||+++.|++|..++...+.+++..++.++.|++.||+|||++||+|||||
T Consensus        54 il~~l-----~h~niv~~~~~~~~~~~~~iv~~~~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiK  128 (292)
T d1unla_          54 LLKEL-----KHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLK  128 (292)
T ss_dssp             HHTTC-----CCTTBCCEEEEEECSSEEEEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             HHHhc-----CcCCEEeeccccccccceeEEeeeccccccccccccccccchhHHHHHHHHHHHHHHHhhcCCEeeeccc
Confidence            99998     9999999999999999999999999999999998888999999999999999999999999999999999


Q ss_pred             CCcEEEeeCCCCCCEEEeecCCCccCCCCC-CcccccCCcccccccccccCC-CCchhhhHHHHHHHHHHHhCCCCCC-C
Q 009980          170 PENCLFLNDREDSPLKIMDFGLSSVEGYTD-PVVGLFGSIDYVSPEALLQDR-ITSKSDMWSLGVILYILLSGYPPFI-A  246 (521)
Q Consensus       170 p~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~~ll~g~~pf~-~  246 (521)
                      |+|||+   +..+.+||+|||.|+...... ......+++.|+|||++.... ++.++||||+||++|+|++|+.||. +
T Consensus       129 P~NIli---~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~  205 (292)
T d1unla_         129 PQNLLI---NRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPG  205 (292)
T ss_dssp             GGGEEE---CTTCCEEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCC
T ss_pred             Cccccc---ccCCceeeeecchhhcccCCCccceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCC
Confidence            999999   777899999999998765433 233446788999999987665 6899999999999999999998864 4


Q ss_pred             CCcHHHHHHHHcCCCCC-------------------------chhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCc
Q 009980          247 QSNRQKQQMIMAGEFSF-------------------------YEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPW  301 (521)
Q Consensus       247 ~~~~~~~~~i~~~~~~~-------------------------~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~  301 (521)
                      .+..+....+.......                         .......+|+.+++||.+||+.||.+||||+|+|+|||
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~Hp~  285 (292)
T d1unla_         206 NDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPY  285 (292)
T ss_dssp             SSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGG
T ss_pred             CCHHHHHHHHHhhcCCCChhhhhhhhhcccccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcChh
Confidence            44444444443211111                         11123457899999999999999999999999999999


Q ss_pred             ccCC
Q 009980          302 VIGD  305 (521)
Q Consensus       302 ~~~~  305 (521)
                      |++.
T Consensus       286 f~~~  289 (292)
T d1unla_         286 FSDF  289 (292)
T ss_dssp             GSSC
T ss_pred             hcCC
Confidence            9753

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-52  Score=413.61  Aligned_cols=262  Identities=25%  Similarity=0.392  Sum_probs=215.3

Q ss_pred             ccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHH
Q 009980            5 TRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALL   84 (521)
Q Consensus         5 ~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (521)
                      .-.+.++|++++.||+|+||+||+|+++.  +++.||||++.+....                          ......+
T Consensus        13 ~~~~~~rY~i~~~LG~G~fg~Vy~a~~~~--~~~~vAiK~i~~~~~~--------------------------~~~~~~~   64 (348)
T d2gfsa1          13 IWEVPERYQNLSPVGSGAYGSVCAAFDTK--TGLRVAVKKLSRPFQS--------------------------IIHAKRT   64 (348)
T ss_dssp             EEEEETTEEEEEECGGGTTSSEEEEEETT--TTEEEEEEECSCTTSS--------------------------HHHHHHH
T ss_pred             cccCCCCeEEEEEEecCCCeEEEEEEECC--CCCEEEEEEECchhcC--------------------------hHHHHHH
Confidence            34567899999999999999999999988  8899999999753221                          1223457


Q ss_pred             HHHHHHHHHHhhccCCCCCccceeEEEEeC-----CeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 009980           85 TNEILVMRKIVENVSPHPNVIDLYDVYEDQ-----NGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALH  159 (521)
Q Consensus        85 ~~E~~~l~~l~~~~~~hpniv~~~~~~~~~-----~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH  159 (521)
                      .+|+.+++++     +|||||++++++...     ...++||+|+.||+|.+++.. +++++.+++.++.||+.||.|||
T Consensus        65 ~~Ei~il~~l-----~h~~iv~~~~~~~~~~~~~~~~~~~i~~~~~gg~L~~~~~~-~~l~e~~~~~i~~qil~aL~~LH  138 (348)
T d2gfsa1          65 YRELRLLKHM-----KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIH  138 (348)
T ss_dssp             HHHHHHHHHC-----CCTTBCCCSEEECSCSSTTTCCCCEEEEECCSEEHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhc-----CCCCeeeEEEEEeeccccccCceEEEEEeecCCchhhhccc-ccccHHHHHHHHHHHHHHHHHHH
Confidence            8999999999     999999999999643     334666777889999998754 57999999999999999999999


Q ss_pred             HCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCC-CCchhhhHHHHHHHHHHH
Q 009980          160 QANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDR-ITSKSDMWSLGVILYILL  238 (521)
Q Consensus       160 ~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~~ll  238 (521)
                      ++||+||||||+|||+   +.++.+|++|||+|.....  ......||+.|+|||++.+.. ++.++||||+||++|+|+
T Consensus       139 ~~giiHrDiKp~NILi---~~~~~~kl~dfg~a~~~~~--~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll  213 (348)
T d2gfsa1         139 SADIIHRDLKPSNLAV---NEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL  213 (348)
T ss_dssp             HTTCCCCCCCGGGEEE---CTTCCEEECCC----CCTG--GGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHH
T ss_pred             hCCCcccccCCccccc---cccccccccccchhcccCc--ccccccccccccCchhhcCCccCCcccchhhhhHHHHHHH
Confidence            9999999999999999   7889999999999976532  344567999999999877654 589999999999999999


Q ss_pred             hCCCCCCCCCcHHHHHHHHcCCCCCch---------------------------hhhhccCHHHHHHHHHhccCCCCCCC
Q 009980          239 SGYPPFIAQSNRQKQQMIMAGEFSFYE---------------------------QTWKNISSSAKQLISSLLTVDPNRRP  291 (521)
Q Consensus       239 ~g~~pf~~~~~~~~~~~i~~~~~~~~~---------------------------~~~~~~s~~~~~li~~~l~~dp~~R~  291 (521)
                      +|.+||.+.+.......+.........                           ..+.++|+++++||.+||..||.+||
T Consensus       214 ~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~  293 (348)
T d2gfsa1         214 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI  293 (348)
T ss_dssp             HSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSC
T ss_pred             hCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCc
Confidence            999999998877776666543322211                           12346899999999999999999999


Q ss_pred             CHHHHHcCCcccCC
Q 009980          292 SAQELLNHPWVIGD  305 (521)
Q Consensus       292 t~~~~l~h~~~~~~  305 (521)
                      |+.|+|+||||++.
T Consensus       294 ta~elL~Hp~f~~~  307 (348)
T d2gfsa1         294 TAAQALAHAYFAQY  307 (348)
T ss_dssp             CHHHHHTSGGGTTT
T ss_pred             CHHHHhcCHhhCCC
Confidence            99999999999854

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.8e-52  Score=393.77  Aligned_cols=257  Identities=28%  Similarity=0.381  Sum_probs=212.9

Q ss_pred             cccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      +--.++|++++.||+|+||+||+|+++.   ++.||||+++...                             .....+.
T Consensus        13 ~i~~~~~~i~~~iG~G~fg~Vy~~~~~~---~~~vAiK~l~~~~-----------------------------~~~~~~~   60 (285)
T d1fmka3          13 EIPRESLRLEVKLGQGCFGEVWMGTWNG---TTRVAIKTLKPGT-----------------------------MSPEAFL   60 (285)
T ss_dssp             BCCGGGEEEEEEEEECSSCEEEEEEETT---TEEEEEEECCTTS-----------------------------SCHHHHH
T ss_pred             EcCHHHEEEeeEEeeCCCeEEEEEEECC---CCEEEEEEECccc-----------------------------CCHHHHH
Confidence            3345799999999999999999999875   4579999986432                             1235689


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA--QERYMEVGAAAVIRQIAEGLAALHQANI  163 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~--~~~~~~~~~~~i~~qil~al~~lH~~~i  163 (521)
                      +|+.+++++     +|||||++++++. ++.+|+|||||++|+|..++..  .+.+++.++..++.||+.||+|||++||
T Consensus        61 ~E~~~l~~l-----~h~nIv~~~g~~~-~~~~~lv~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~i  134 (285)
T d1fmka3          61 QEAQVMKKL-----RHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY  134 (285)
T ss_dssp             HHHHHHHHC-----CCTTBCCEEEEEC-SSSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHhc-----ccCCEeEEEEEEe-cCCeEEEEEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhhe
Confidence            999999999     9999999999985 4567999999999999888754  3579999999999999999999999999


Q ss_pred             eeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC--CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhC-
Q 009980          164 VHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD--PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSG-  240 (521)
Q Consensus       164 ~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g-  240 (521)
                      +||||||+|||+   +.++.+||+|||+|+......  ......||+.|+|||++..+.++.++||||+||++|+|++| 
T Consensus       135 vH~DlKp~NIll---~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~  211 (285)
T d1fmka3         135 VHRDLRAANILV---GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG  211 (285)
T ss_dssp             CCSCCSGGGEEE---CGGGCEEECCCCTTC--------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTT
T ss_pred             ecccccceEEEE---CCCCcEEEcccchhhhccCCCceeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCC
Confidence            999999999999   777899999999998654322  22345799999999999999999999999999999999995 


Q ss_pred             CCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc--CCcccCCC
Q 009980          241 YPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN--HPWVIGDS  306 (521)
Q Consensus       241 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~--h~~~~~~~  306 (521)
                      .+|+.+....+....+..+....   .+..+|+++++||.+||+.||++|||+++++.  |+||....
T Consensus       212 ~p~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~~~  276 (285)
T d1fmka3         212 RVPYPGMVNREVLDQVERGYRMP---CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE  276 (285)
T ss_dssp             CCSSTTCCHHHHHHHHHTTCCCC---CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSC
T ss_pred             CCCCCCCCHHHHHHHHHhcCCCC---CCcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhcCCC
Confidence            66667777777777777664322   23678999999999999999999999999998  88997543

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4e-52  Score=395.96  Aligned_cols=253  Identities=29%  Similarity=0.396  Sum_probs=206.2

Q ss_pred             cccceeecccccccCceEEEEeEEccCC-CcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCG-ETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      -.++|++++.||+|+||.||+|++...+ .+..||||.++....                           ......+.+
T Consensus         5 ~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~---------------------------~~~~~~~~~   57 (273)
T d1mp8a_           5 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTS---------------------------DSVREKFLQ   57 (273)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTS---------------------------HHHHHHHHH
T ss_pred             CHHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccC---------------------------HHHHHHHHH
Confidence            3579999999999999999999987532 345688888753211                           122456889


Q ss_pred             HHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 009980           87 EILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQANIVH  165 (521)
Q Consensus        87 E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~al~~lH~~~i~H  165 (521)
                      |+.+++++     +||||+++++++. ++.+|+|||||++|+|.+++.. ...+++..+..++.||+.||.|||++||+|
T Consensus        58 E~~~l~~l-----~HpnIv~l~~~~~-~~~~~iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiH  131 (273)
T d1mp8a_          58 EALTMRQF-----DHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVH  131 (273)
T ss_dssp             HHHHHHTC-----CCTTBCCEEEEEC-SSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             HHHHHHhC-----CCCCEeeEEEEEe-cCeEEEEEEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcccCeec
Confidence            99999998     9999999999985 5678999999999999998765 457999999999999999999999999999


Q ss_pred             ccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC--CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CCC
Q 009980          166 RDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD--PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYP  242 (521)
Q Consensus       166 ~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~  242 (521)
                      |||||+||++   +.++.+||+|||+|+......  ......||+.|+|||++.+..|+.++||||+||++|+|++ |.+
T Consensus       132 rDlKp~NIll---~~~~~~Kl~DfG~a~~~~~~~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~  208 (273)
T d1mp8a_         132 RDIAARNVLV---SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVK  208 (273)
T ss_dssp             SCCSGGGEEE---EETTEEEECC-------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCC
T ss_pred             cccchhheee---cCCCcEEEccchhheeccCCcceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCC
Confidence            9999999999   667789999999998654322  2234568999999999999999999999999999999998 899


Q ss_pred             CCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          243 PFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       243 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      ||.+.+..+....+..+....   .++++|+++++||.+||+.||.+|||+.++++|
T Consensus       209 P~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~  262 (273)
T d1mp8a_         209 PFQGVKNNDVIGRIENGERLP---MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ  262 (273)
T ss_dssp             TTTTCCGGGHHHHHHTTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHcCCCCC---CCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            999999999998888876432   346799999999999999999999999999874

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-51  Score=391.16  Aligned_cols=255  Identities=27%  Similarity=0.349  Sum_probs=207.5

Q ss_pred             cccccceeecccccccCceEEEEeEEccCC--CcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTCG--ETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDAL   83 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~--~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (521)
                      +.-.++|++.++||+|+||+||+|..+..+  ....||||+++....                           ......
T Consensus         3 ei~~~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~---------------------------~~~~~~   55 (283)
T d1mqba_           3 EIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYT---------------------------EKQRVD   55 (283)
T ss_dssp             BCCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCC---------------------------HHHHHH
T ss_pred             cCCHHHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccC---------------------------hHHHHH
Confidence            334568999999999999999999987532  124799999864221                           122345


Q ss_pred             HHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Q 009980           84 LTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQAN  162 (521)
Q Consensus        84 ~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~~~  162 (521)
                      +.+|+.+++++     +|||||++++++.+.+..++|||||.++++.+.+... +.+++.++..++.||+.||.|||++|
T Consensus        56 ~~~E~~il~~l-----~H~nIv~~~g~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~  130 (283)
T d1mqba_          56 FLGEAGIMGQF-----SHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMN  130 (283)
T ss_dssp             HHHHHHHHHTC-----CCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHhc-----CCCCEeeeeEEEecCCceEEEEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhccccc
Confidence            78999999998     9999999999999999999999999999999887654 57999999999999999999999999


Q ss_pred             CeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC----CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHH
Q 009980          163 IVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD----PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILL  238 (521)
Q Consensus       163 i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll  238 (521)
                      |+||||||+|||+   +.++.+||+|||+|+......    ......||+.|+|||++.++.|+.++||||+||++|+|+
T Consensus       131 iiHrDlKp~NILl---~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~  207 (283)
T d1mqba_         131 YVHRDLAARNILV---NSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVM  207 (283)
T ss_dssp             CCCSCCCGGGEEE---CTTCCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHH
T ss_pred             cccCccccceEEE---CCCCeEEEcccchhhcccCCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHH
Confidence            9999999999999   788999999999998653322    123346899999999999999999999999999999999


Q ss_pred             hC-CCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          239 SG-YPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       239 ~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      +| .+|+...+..+....+..+....   .+..+|+.+++||.+||..||++|||+.++++
T Consensus       208 t~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~  265 (283)
T d1mqba_         208 TYGERPYWELSNHEVMKAINDGFRLP---TPMDCPSAIYQLMMQCWQQERARRPKFADIVS  265 (283)
T ss_dssp             TTSCCTTTTCCHHHHHHHHHTTCCCC---CCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             hCCCCccccCCHHHHHHHHhccCCCC---CchhhHHHHHHHHHHHCcCCHhHCcCHHHHHH
Confidence            95 56666667777777777664322   22568999999999999999999999999986

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-51  Score=398.75  Aligned_cols=253  Identities=25%  Similarity=0.340  Sum_probs=214.0

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ++|++.+.||+|+||+||+|+++.++....||||.+......                           .....+.+|+.
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~---------------------------~~~~~~~~E~~   62 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASK---------------------------DDHRDFAGELE   62 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC---------------------------------CHHHHHHH
T ss_pred             HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccCh---------------------------HHHHHHHHHHH
Confidence            699999999999999999999988444446788887543221                           11235889999


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc----------------CCCCHHHHHHHHHHHHH
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ----------------ERYMEVGAAAVIRQIAE  153 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~----------------~~~~~~~~~~i~~qil~  153 (521)
                      ++.++    .+|||||++++++.+++..|+|||||+||+|.+++...                ..+++..+..++.||+.
T Consensus        63 ~l~~l----~~HpnIv~~~~~~~~~~~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~  138 (309)
T d1fvra_          63 VLCKL----GHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVAR  138 (309)
T ss_dssp             HHTTC----CCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHH
T ss_pred             HHHhc----cCCCCEeeEEEEEecCCeeEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHH
Confidence            99886    36999999999999999999999999999999998654                56999999999999999


Q ss_pred             HHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHH
Q 009980          154 GLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVI  233 (521)
Q Consensus       154 al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i  233 (521)
                      ||.|||++||+||||||+|||+   +.++.+||+|||+|+............||+.|+|||.+.++.|+.++|||||||+
T Consensus       139 gl~~lH~~~iiHrDlkp~NIL~---~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvi  215 (309)
T d1fvra_         139 GMDYLSQKQFIHRDLAARNILV---GENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVL  215 (309)
T ss_dssp             HHHHHHHTTEECSCCSGGGEEE---CGGGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHH
T ss_pred             HHHhhhcCCccccccccceEEE---cCCCceEEccccccccccccccccceecCCcccchHHhccCCCCccceeehhHHH
Confidence            9999999999999999999999   7778999999999986654444455679999999999999999999999999999


Q ss_pred             HHHHHhC-CCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          234 LYILLSG-YPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       234 l~~ll~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      +|+|++| .+||.+.+..++...+..+...   ..+..+|+++++||.+||+.||++|||+.++++|
T Consensus       216 l~ell~~~~~p~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~  279 (309)
T d1fvra_         216 LWEIVSLGGTPYCGMTCAELYEKLPQGYRL---EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  279 (309)
T ss_dssp             HHHHHTTSCCTTTTCCHHHHHHHGGGTCCC---CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHhcCCCCCCCCCHHHHHHHHHhcCCC---CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            9999996 5689888888888887766432   2235689999999999999999999999999985

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4e-51  Score=394.68  Aligned_cols=254  Identities=24%  Similarity=0.345  Sum_probs=200.7

Q ss_pred             ccceeecccccccCceEEEEeEEccC---CCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKTC---GETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      .++|++++.||+|+||.||+|+++..   .+++.||||+++....                           ......+.
T Consensus        12 ~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~---------------------------~~~~~~~~   64 (299)
T d1ywna1          12 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT---------------------------HSEHRALM   64 (299)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----C---------------------------HHHHHHHH
T ss_pred             HHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccC---------------------------cHHHHHHH
Confidence            47899999999999999999997642   2457899999864221                           12234566


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeC-CeEEEEEeccCCCchHHHHHhc----------------CCCCHHHHHHHH
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQ-NGVHLILELCSGGELFDRIVAQ----------------ERYMEVGAAAVI  148 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~-~~~~lv~e~~~gg~L~~~l~~~----------------~~~~~~~~~~i~  148 (521)
                      +|..++.++    .+||||+.+++++..+ ..+++|||||+||+|.+++...                ..+++.++..++
T Consensus        65 ~e~~~l~~~----~~h~~iv~~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  140 (299)
T d1ywna1          65 SELKILIHI----GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS  140 (299)
T ss_dssp             HHHHHHHHH----CCCTTBCCEEEEECSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHH
T ss_pred             HHHHHHHhh----cCCCeEEEeeeeeccCCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHH
Confidence            777777776    4799999999998654 4689999999999999999753                348999999999


Q ss_pred             HHHHHHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC---CcccccCCcccccccccccCCCCchh
Q 009980          149 RQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD---PVVGLFGSIDYVSPEALLQDRITSKS  225 (521)
Q Consensus       149 ~qil~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~  225 (521)
                      .||+.||.|||++||+||||||+|||+   +.++.+||+|||+|+......   ......||+.|+|||++.++.|+.++
T Consensus       141 ~qi~~gl~ylH~~~ivHrDlKp~NILl---~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~s  217 (299)
T d1ywna1         141 FQVAKGMEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQS  217 (299)
T ss_dssp             HHHHHHHHHHHHTTCCCSCCCGGGEEE---CGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHH
T ss_pred             HHHHHHHHHHHhCCCcCCcCCccceeE---CCCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCccc
Confidence            999999999999999999999999999   778899999999998644322   22345799999999999999999999


Q ss_pred             hhHHHHHHHHHHHhC-CCCCCCCCcHHHH-HHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          226 DMWSLGVILYILLSG-YPPFIAQSNRQKQ-QMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       226 DiwslG~il~~ll~g-~~pf~~~~~~~~~-~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      ||||+||++|+|++| .+||.+.+..+.. ..+..+...   ..+..+|+++++|+.+||+.||++|||+.++++|
T Consensus       218 DiwS~Gvil~ellt~~~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~  290 (299)
T d1ywna1         218 DVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM---RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  290 (299)
T ss_dssp             HHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ceeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCC---CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            999999999999986 5788776655444 444444322   1235689999999999999999999999999986

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-51  Score=389.29  Aligned_cols=254  Identities=26%  Similarity=0.375  Sum_probs=205.7

Q ss_pred             ccceeecccccccCceEEEEeEEcc-CCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            9 TDEYEVTDILGRGGFSVVRRGIKKT-CGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         9 ~~~Y~~~~~lG~G~~g~V~~a~~~~-~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      .++|++.+.||+|+||.||+|+... .+....||||++.+.....                         ......+.+|
T Consensus         7 ~~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~-------------------------~~~~~~~~~E   61 (273)
T d1u46a_           7 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQ-------------------------PEAMDDFIRE   61 (273)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC---------------------------------CHHHHHHHHH
T ss_pred             hHHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCC-------------------------HHHHHHHHHH
Confidence            3679999999999999999998753 2234579999987543321                         1223468899


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVA-QERYMEVGAAAVIRQIAEGLAALHQANIVHR  166 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qil~al~~lH~~~i~H~  166 (521)
                      +.+++++     +||||+++++++.+ ..+++|||||++|+|.+++.. .+.+++..+..++.||+.||.|||++||+||
T Consensus        62 i~~l~~l-----~H~nIv~~~g~~~~-~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHr  135 (273)
T d1u46a_          62 VNAMHSL-----DHRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHR  135 (273)
T ss_dssp             HHHHHHC-----CCTTBCCEEEEECS-SSCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred             HHHHHhC-----CCCCEEEEEEEEee-cchheeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhCCEeee
Confidence            9999999     99999999999975 467899999999999987765 4579999999999999999999999999999


Q ss_pred             cCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC----cccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CC
Q 009980          167 DLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP----VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GY  241 (521)
Q Consensus       167 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~  241 (521)
                      ||||+||++   +.++.+||+|||+++.......    .....||+.|+|||++.+..++.++|||||||++|+|+| |.
T Consensus       136 Dikp~NIll---~~~~~vkl~DfGl~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~  212 (273)
T d1u46a_         136 DLAARNLLL---ATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQ  212 (273)
T ss_dssp             CCCGGGEEE---EETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSC
T ss_pred             eecHHHhcc---ccccceeeccchhhhhcccCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCC
Confidence            999999999   5567899999999987543322    223457889999999999999999999999999999998 89


Q ss_pred             CCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          242 PPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       242 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      +||.+.+..+....+......++  .++.+|+++++||.+||..||++|||+.++++
T Consensus       213 ~Pf~~~~~~~~~~~i~~~~~~~~--~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~  267 (273)
T d1u46a_         213 EPWIGLNGSQILHKIDKEGERLP--RPEDCPQDIYNVMVQCWAHKPEDRPTFVALRD  267 (273)
T ss_dssp             CTTTTCCHHHHHHHHHTSCCCCC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCCcCHHHHHHHHHhCCCCCC--CcccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            99999999999888887765443  23678999999999999999999999999874

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6e-51  Score=396.01  Aligned_cols=250  Identities=27%  Similarity=0.396  Sum_probs=208.9

Q ss_pred             cceeecccccccCceEEEEeEEccCCCcc----eEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHH
Q 009980           10 DEYEVTDILGRGGFSVVRRGIKKTCGETN----QVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLT   85 (521)
Q Consensus        10 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~----~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (521)
                      ++|++++.||+|+||+||+|+++.  +++    .||+|.++.....                           .....+.
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~--~~~~~~~~vavK~~~~~~~~---------------------------~~~~~~~   59 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIP--EGEKVKIPVAIKELREATSP---------------------------KANKEIL   59 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC------CCEEEEEEEECC-------------------------------CTHHHHH
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcC--CCCEEEEEEEEEEeccccCH---------------------------HHHHHHH
Confidence            479999999999999999999987  444    5788887542211                           1245688


Q ss_pred             HHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 009980           86 NEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQANIV  164 (521)
Q Consensus        86 ~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~~~i~  164 (521)
                      +|+.+++++     +|||||++++++.++ ..+++|||+.+|+|.+.+... ..+++..+..++.||+.||.|||++||+
T Consensus        60 ~E~~~l~~l-----~HpnIv~l~g~~~~~-~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~ii  133 (317)
T d1xkka_          60 DEAYVMASV-----DNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV  133 (317)
T ss_dssp             HHHHHHHHC-----CCTTBCCEEEEEESS-SEEEEEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHhC-----CCCCEeeEEEEEecC-CeeEEEEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHcCcc
Confidence            999999999     999999999999865 567889999999999887764 5799999999999999999999999999


Q ss_pred             eccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC---cccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-C
Q 009980          165 HRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-G  240 (521)
Q Consensus       165 H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g  240 (521)
                      ||||||+|||+   +.++.+||+|||+|+.......   .....||+.|+|||++.++.|+.++||||+||++|+|+| |
T Consensus       134 HrDlKp~NIll---~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g  210 (317)
T d1xkka_         134 HRDLAARNVLV---KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG  210 (317)
T ss_dssp             CSCCCGGGEEE---EETTEEEECCCSHHHHTTTTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred             cCcchhhccee---CCCCCeEeeccccceecccccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCC
Confidence            99999999999   6678899999999986543322   233468999999999999999999999999999999998 8


Q ss_pred             CCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCC
Q 009980          241 YPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHP  300 (521)
Q Consensus       241 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~  300 (521)
                      .+||.+.+..++...+..+.....   +..+|+++.+|+.+||..||.+|||+.+++.|.
T Consensus       211 ~~p~~~~~~~~~~~~i~~~~~~~~---p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l  267 (317)
T d1xkka_         211 SKPYDGIPASEISSILEKGERLPQ---PPICTIDVYMIMVKCWMIDADSRPKFRELIIEF  267 (317)
T ss_dssp             CCTTTTSCGGGHHHHHHHTCCCCC---CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHcCCCCCC---CcccCHHHHHHHHHhCCCChhhCcCHHHHHHHH
Confidence            999999888888888877654322   256899999999999999999999999999873

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-51  Score=385.58  Aligned_cols=244  Identities=25%  Similarity=0.363  Sum_probs=204.3

Q ss_pred             cccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      -.++|++++.||+|+||.||+|+.+    +..||||++++..                              ....+.+|
T Consensus         5 ~~~~~~~~~~lG~G~fg~Vy~~~~~----~~~vAvK~i~~~~------------------------------~~~~~~~E   50 (262)
T d1byga_           5 NMKELKLLQTIGKGEFGDVMLGDYR----GNKVAVKCIKNDA------------------------------TAQAFLAE   50 (262)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEET----TEEEEEEECCCCC--------------------------------HHHHHT
T ss_pred             CHHHeEEeEEEecCCCeEEEEEEEC----CeEEEEEEECcHH------------------------------HHHHHHHH
Confidence            3578999999999999999999984    5679999986421                              12458899


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEe-CCeEEEEEeccCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYED-QNGVHLILELCSGGELFDRIVAQE--RYMEVGAAAVIRQIAEGLAALHQANIV  164 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~-~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qil~al~~lH~~~i~  164 (521)
                      +.+++++     +||||+++++++.+ ++.+|+||||+++|+|.+++...+  .+++..+..++.||+.||.|||+++|+
T Consensus        51 ~~~l~~l-----~HpnIv~~~g~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~iv  125 (262)
T d1byga_          51 ASVMTQL-----RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFV  125 (262)
T ss_dssp             HHHHTTC-----CCTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHhC-----CCCCEeeEEEEEEecCCcEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCcee
Confidence            9999998     99999999998854 567899999999999999987543  489999999999999999999999999


Q ss_pred             eccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHh-CCCC
Q 009980          165 HRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLS-GYPP  243 (521)
Q Consensus       165 H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~p  243 (521)
                      ||||||+|||+   +.++.+||+|||+++.....  .....+|+.|+|||++.++.++.++|||||||++|+|+| |++|
T Consensus       126 H~dlkp~Nil~---~~~~~~kl~dfg~s~~~~~~--~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p  200 (262)
T d1byga_         126 HRDLAARNVLV---SEDNVAKVSDFGLTKEASST--QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP  200 (262)
T ss_dssp             CSCCSGGGEEE---CTTSCEEECCCCC--------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCS
T ss_pred             ccccchHhhee---cCCCCEeecccccceecCCC--CccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCC
Confidence            99999999999   77889999999999865432  334468999999999999999999999999999999998 7999


Q ss_pred             CCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          244 FIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       244 f~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      |...+..+....+..+.....   ...+|+++++||.+||..||.+|||+.++++
T Consensus       201 ~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~  252 (262)
T d1byga_         201 YPRIPLKDVVPRVEKGYKMDA---PDGCPPAVYEVMKNCWHLDAAMRPSFLQLRE  252 (262)
T ss_dssp             CTTSCGGGHHHHHTTTCCCCC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCCHHHHHHHHHcCCCCCC---CccCCHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence            999888888888876543322   3568999999999999999999999999987

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-50  Score=388.12  Aligned_cols=254  Identities=25%  Similarity=0.379  Sum_probs=211.3

Q ss_pred             cccceeecccccccCceEEEEeEEccCC-----CcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCG-----ETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDA   82 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (521)
                      -.++|++++.||+|+||.||+|++...+     ++..||||++++...                           .....
T Consensus        11 ~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~---------------------------~~~~~   63 (299)
T d1fgka_          11 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT---------------------------EKDLS   63 (299)
T ss_dssp             CGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCC---------------------------HHHHH
T ss_pred             cHHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccC---------------------------hHHHH
Confidence            4689999999999999999999876421     235799999864221                           12234


Q ss_pred             HHHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc----------------CCCCHHHHHH
Q 009980           83 LLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ----------------ERYMEVGAAA  146 (521)
Q Consensus        83 ~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~----------------~~~~~~~~~~  146 (521)
                      .+.+|...+.++    .+|||||++++++.+++.+|+|||||++|+|.+++...                ..+++.++..
T Consensus        64 ~~~~e~~~l~~~----~~HpnIv~~~~~~~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  139 (299)
T d1fgka_          64 DLISEMEMMKMI----GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS  139 (299)
T ss_dssp             HHHHHHHHHHHH----CCCTTBCCEEEEECSSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHH
T ss_pred             HHHHHHHHHHHh----cCCCeEEecccccccCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHH
Confidence            577788888877    47999999999999999999999999999999999754                3589999999


Q ss_pred             HHHHHHHHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC---CcccccCCcccccccccccCCCCc
Q 009980          147 VIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD---PVVGLFGSIDYVSPEALLQDRITS  223 (521)
Q Consensus       147 i~~qil~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~  223 (521)
                      ++.||+.||+|||++||+||||||+|||+   +.++.+||+|||+++......   ......||+.|+|||.+.++.|+.
T Consensus       140 ~~~qi~~al~ylH~~~ivHrDiKp~NiLl---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~  216 (299)
T d1fgka_         140 CAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTH  216 (299)
T ss_dssp             HHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCH
T ss_pred             HHHHHHHHHHHhhhCCEEeeeecccceee---cCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCc
Confidence            99999999999999999999999999999   778899999999998653322   233457899999999999999999


Q ss_pred             hhhhHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          224 KSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       224 ~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      ++|||||||++|+|++ |.+||.+.+..+....+..+....   .+..+|+++++||.+||+.||.+|||+.++++
T Consensus       217 k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~~~~i~~~~~~~---~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~  289 (299)
T d1fgka_         217 QSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMD---KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE  289 (299)
T ss_dssp             HHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCC---CCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hhhhHHhHHHHHHhccCCCCCCCCCCHHHHHHHHHcCCCCC---CCccchHHHHHHHHHHccCCHhHCcCHHHHHH
Confidence            9999999999999998 799999988888888777764332   23568999999999999999999999999986

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.8e-50  Score=389.95  Aligned_cols=255  Identities=25%  Similarity=0.344  Sum_probs=217.3

Q ss_pred             cccccceeecccccccCceEEEEeEEcc---CCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKT---CGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDA   82 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~---~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (521)
                      +.-.++|++.+.||+|+||+||+|+.+.   ..+++.||||+++....                           .....
T Consensus         9 e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~---------------------------~~~~~   61 (301)
T d1lufa_           9 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS---------------------------ADMQA   61 (301)
T ss_dssp             BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCC---------------------------HHHHH
T ss_pred             cCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcC---------------------------hHHHH
Confidence            3446789999999999999999999753   12567899999864221                           12245


Q ss_pred             HHHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC------------------------C
Q 009980           83 LLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE------------------------R  138 (521)
Q Consensus        83 ~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~------------------------~  138 (521)
                      .+.+|+.+++++     +||||+++++++...+..++||||+.+|+|.+++....                        .
T Consensus        62 ~~~~E~~il~~l-----~h~niv~~~~~~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  136 (301)
T d1lufa_          62 DFQREAALMAEF-----DNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPP  136 (301)
T ss_dssp             HHHHHHHHHHTC-----CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CC
T ss_pred             HHHHHHHHHHhc-----CCCCcccceeeeccCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCC
Confidence            688999999998     99999999999999999999999999999999986532                        3


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC---CcccccCCcccccccc
Q 009980          139 YMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD---PVVGLFGSIDYVSPEA  215 (521)
Q Consensus       139 ~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~  215 (521)
                      +++..+..|+.||+.||+|||++||+||||||+|||+   +.++.+||+|||+|+......   ......||+.|+|||.
T Consensus       137 l~~~~~~~i~~qi~~gl~ylH~~~ivHrDlKp~NILl---d~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~  213 (301)
T d1lufa_         137 LSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLV---GENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPES  213 (301)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHH
T ss_pred             CCHHHHHHHHHHHHHHhhhcccCCeEeeEEcccceEE---CCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHH
Confidence            7899999999999999999999999999999999999   778899999999997543322   2234578999999999


Q ss_pred             cccCCCCchhhhHHHHHHHHHHHhCC-CCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHH
Q 009980          216 LLQDRITSKSDMWSLGVILYILLSGY-PPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQ  294 (521)
Q Consensus       216 ~~~~~~~~~~DiwslG~il~~ll~g~-~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~  294 (521)
                      +.+..|+.++|||||||++|+|++|. +||.+.+..+....+..+.....   +..+|+++.+||.+||+.||++|||+.
T Consensus       214 ~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e~~~~v~~~~~~~~---p~~~~~~~~~li~~cl~~~P~~RPt~~  290 (301)
T d1lufa_         214 IFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILAC---PENCPLELYNLMRLCWSKLPADRPSFC  290 (301)
T ss_dssp             HHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCC---CTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HccCCCChhhhhccchhhHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCC---CccchHHHHHHHHHHcCCChhHCcCHH
Confidence            99999999999999999999999984 78999999999998888765432   357899999999999999999999999


Q ss_pred             HHHc
Q 009980          295 ELLN  298 (521)
Q Consensus       295 ~~l~  298 (521)
                      ++++
T Consensus       291 ev~~  294 (301)
T d1lufa_         291 SIHR  294 (301)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9965

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=4.1e-50  Score=387.68  Aligned_cols=260  Identities=19%  Similarity=0.231  Sum_probs=205.7

Q ss_pred             ccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHH
Q 009980            7 KLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTN   86 (521)
Q Consensus         7 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (521)
                      ++.++|++++.||+|+||+||+|+++.  +++.||||++.....                              ...+..
T Consensus         4 ~vg~rY~l~~~iG~G~fG~Vy~a~~~~--~~~~vAvK~~~~~~~------------------------------~~~~~~   51 (299)
T d1ckia_           4 RVGNRYRLGRKIGSGSFGDIYLGTDIA--AGEEVAIKLECVKTK------------------------------HPQLHI   51 (299)
T ss_dssp             EETTTEEEEEEEEECSSSEEEEEEETT--TTEEEEEEEEESCTT------------------------------SCCHHH
T ss_pred             eECCEEEEeEEEeeCCCcEEEEEEECC--CCCEEEEEEEchhcc------------------------------CHHHHH
Confidence            356789999999999999999999987  788999999865321                              123678


Q ss_pred             HHHHHHHHhhccCCCC-CccceeEEEEeCCeEEEEEeccCCCchHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 009980           87 EILVMRKIVENVSPHP-NVIDLYDVYEDQNGVHLILELCSGGELFDRIV-AQERYMEVGAAAVIRQIAEGLAALHQANIV  164 (521)
Q Consensus        87 E~~~l~~l~~~~~~hp-niv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~-~~~~~~~~~~~~i~~qil~al~~lH~~~i~  164 (521)
                      |+.+++.+     .|+ +|+.+..++.+.+..++||||+.| +|.+.+. ..+.+++..+..++.|++.||.|||++||+
T Consensus        52 E~~i~~~l-----~~~~~i~~~~~~~~~~~~~~ivme~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ii  125 (299)
T d1ckia_          52 ESKIYKMM-----QGGVGIPTIRWCGAEGDYNVMVMELLGP-SLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFI  125 (299)
T ss_dssp             HHHHHHHS-----TTSTTCCCEEEEEEETTEEEEEEECCCC-BHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHc-----cCCCcccEEEEEEecCCEEEEEEEEcCC-chhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHCCee
Confidence            99999888     555 566667777888999999999955 6655554 456899999999999999999999999999


Q ss_pred             eccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC--------CcccccCCcccccccccccCCCCchhhhHHHHHHHHH
Q 009980          165 HRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD--------PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYI  236 (521)
Q Consensus       165 H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~  236 (521)
                      ||||||+|||+...+.+..+||+|||+|+......        .....+||+.|+|||++.+.+|+.++|||||||++|+
T Consensus       126 HrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~e  205 (299)
T d1ckia_         126 HRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMY  205 (299)
T ss_dssp             CSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHH
T ss_pred             eccCCHhhccccccCCCceeeeeccCcceeccccccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHH
Confidence            99999999999655667789999999998643221        1234579999999999999999999999999999999


Q ss_pred             HHhCCCCCCCCCcHHHHHHHH---cCCC-CCchhhhhccCHHHHHHHHHhccCCCCCCCCHHH---HHcCCcccC
Q 009980          237 LLSGYPPFIAQSNRQKQQMIM---AGEF-SFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQE---LLNHPWVIG  304 (521)
Q Consensus       237 ll~g~~pf~~~~~~~~~~~i~---~~~~-~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~---~l~h~~~~~  304 (521)
                      |++|.+||...........+.   .... ......+.++|+++.+|+.+||+.||++||++.+   +|+|+|...
T Consensus       206 l~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~~~  280 (299)
T d1ckia_         206 FNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ  280 (299)
T ss_dssp             HHHSSCTTCCCC-------HHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHHHH
T ss_pred             HHhCCCcccccchHHHHHHHHHhhcccCCCChhHhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHHHc
Confidence            999999998765544332221   1111 1223345679999999999999999999999874   567777643

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-49  Score=384.89  Aligned_cols=255  Identities=22%  Similarity=0.347  Sum_probs=214.2

Q ss_pred             cccceeecccccccCceEEEEeEEcc---CCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKT---CGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALL   84 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~---~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (521)
                      -.++|++++.||+|+||.||+|+.+.   ..+++.||||++++...                           ......+
T Consensus        21 ~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~---------------------------~~~~~~~   73 (311)
T d1t46a_          21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH---------------------------LTEREAL   73 (311)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC---------------------------HHHHHHH
T ss_pred             CHHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccC---------------------------HHHHHHH
Confidence            35899999999999999999998642   23678899999964321                           1234458


Q ss_pred             HHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcC------------------CCCHHHHHH
Q 009980           85 TNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQE------------------RYMEVGAAA  146 (521)
Q Consensus        85 ~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~------------------~~~~~~~~~  146 (521)
                      .+|+.++.++    .+|||||++++++.+++.+|+|||||+||+|.+++....                  .+++..+..
T Consensus        74 ~~E~~~~~~l----~~HpnIv~~~g~~~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  149 (311)
T d1t46a_          74 MSELKVLSYL----GNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLS  149 (311)
T ss_dssp             HHHHHHHHHH----CCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHH
T ss_pred             HHHHHHHHhc----cCCCCEEEEEEEEeeCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHH
Confidence            8999999988    469999999999999999999999999999999987543                  589999999


Q ss_pred             HHHHHHHHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC---cccccCCcccccccccccCCCCc
Q 009980          147 VIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALLQDRITS  223 (521)
Q Consensus       147 i~~qil~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~  223 (521)
                      ++.||+.||+|||++||+||||||+||++   +..+.+|++|||.++.......   ....+||+.|+|||++.+..++.
T Consensus       150 ~~~qi~~gl~~LH~~~ivHrDLKp~NIl~---~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  226 (311)
T d1t46a_         150 FSYQVAKGMAFLASKNCIHRDLAARNILL---THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTF  226 (311)
T ss_dssp             HHHHHHHHHHHHHHTTCCCSCCSGGGEEE---ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCH
T ss_pred             HHHHHHHHHHHHHhCCeeecccccccccc---cccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCC
Confidence            99999999999999999999999999999   6778999999999986543322   23457899999999999999999


Q ss_pred             hhhhHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          224 KSDMWSLGVILYILLS-GYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       224 ~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      ++|||||||++|+|+| |.+||.+.+..+....+.........  ...+|+.+++||.+||+.||.+|||++++++
T Consensus       227 ~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~  300 (311)
T d1t46a_         227 ESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLS--PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ  300 (311)
T ss_dssp             HHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCCC--CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cccccchHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCC--cccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            9999999999999998 77778777766665555444333322  2568999999999999999999999999986

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.3e-49  Score=381.88  Aligned_cols=255  Identities=28%  Similarity=0.382  Sum_probs=218.1

Q ss_pred             cccccceeecccccccCceEEEEeEEccC---CCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHH
Q 009980            6 RKLTDEYEVTDILGRGGFSVVRRGIKKTC---GETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDA   82 (521)
Q Consensus         6 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (521)
                      +.-.++|++++.||+|+||+||+|.++..   .++..||||++++...                           .....
T Consensus        16 ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~---------------------------~~~~~   68 (308)
T d1p4oa_          16 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS---------------------------MRERI   68 (308)
T ss_dssp             BCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSC---------------------------HHHHH
T ss_pred             eecHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccC---------------------------hHHHH
Confidence            34468999999999999999999988631   1357899999864221                           12234


Q ss_pred             HHHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc----------CCCCHHHHHHHHHHHH
Q 009980           83 LLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ----------ERYMEVGAAAVIRQIA  152 (521)
Q Consensus        83 ~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~----------~~~~~~~~~~i~~qil  152 (521)
                      .+.+|+.+++++     +||||+++++++..+...++|||||.+|+|.+++...          ..++...+..++.|++
T Consensus        69 ~~~~E~~il~~l-----~h~nIv~~~~~~~~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia  143 (308)
T d1p4oa_          69 EFLNEASVMKEF-----NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA  143 (308)
T ss_dssp             HHHHHHHHGGGC-----CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHc-----CCCCEeeeeeEEecCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHH
Confidence            588999999998     9999999999999999999999999999999988643          2468899999999999


Q ss_pred             HHHHHHHHCCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCCC---cccccCCcccccccccccCCCCchhhhHH
Q 009980          153 EGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDP---VVGLFGSIDYVSPEALLQDRITSKSDMWS  229 (521)
Q Consensus       153 ~al~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Diws  229 (521)
                      .||.|||+++|+||||||+|||+   +.++.+||+|||+|+.......   .....||+.|+|||.+.+..++.++||||
T Consensus       144 ~gl~~LH~~~ivHrDlk~~NiLl---d~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S  220 (308)
T d1p4oa_         144 DGMAYLNANKFVHRDLAARNCMV---AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWS  220 (308)
T ss_dssp             HHHHHHHHTTCBCSCCSGGGEEE---CTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHH
T ss_pred             HHHHHHhhCCeeeceEcCCceee---cCCceEEEeecccceeccCCcceeeccceecccccCCHHHHccCCCCccccccc
Confidence            99999999999999999999999   7889999999999986543222   23346899999999999999999999999


Q ss_pred             HHHHHHHHHhC-CCCCCCCCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          230 LGVILYILLSG-YPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       230 lG~il~~ll~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      +||++|+|+|| .+||.+.+..+....+.++.....   ...+|+.++++|.+||+.||++|||+.++++
T Consensus       221 ~G~il~El~t~~~~p~~~~~~~~~~~~i~~~~~~~~---p~~~~~~l~~li~~cl~~~P~~RPs~~~il~  287 (308)
T d1p4oa_         221 FGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDK---PDNCPDMLFELMRMCWQYNPKMRPSFLEIIS  287 (308)
T ss_dssp             HHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTCCCCC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCCCCCC---cccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            99999999998 589999999999988888765332   2568999999999999999999999999997

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=3.5e-48  Score=372.15  Aligned_cols=254  Identities=20%  Similarity=0.274  Sum_probs=208.6

Q ss_pred             cccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      +.++|++++.||+|+||+||+|+++.  +++.||||+++....                              ...+.+|
T Consensus         3 ig~~Y~i~~~iG~G~fG~Vy~a~~~~--~~~~vAvK~~~~~~~------------------------------~~~~~~e   50 (293)
T d1csna_           3 VGVHYKVGRRIGEGSFGVIFEGTNLL--NNQQVAIKFEPRRSD------------------------------APQLRDE   50 (293)
T ss_dssp             ETTTEEEEEEEEECSSCEEEEEEETT--TTEEEEEEEEECCTT------------------------------SCCHHHH
T ss_pred             CCCceEEEEEEecCCCeEEEEEEECC--CCCEEEEEEEccccC------------------------------cHHHHHH
Confidence            56799999999999999999999988  789999999865321                              1236788


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQANIVHR  166 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~~~i~H~  166 (521)
                      ++.++.+    .+||||+.+++++..+...|+||||+ |++|.+.+... ..+++..+..++.|++.||.|||++||+||
T Consensus        51 ~~~~~~l----~~~~~i~~~~~~~~~~~~~~~vme~~-~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHr  125 (293)
T d1csna_          51 YRTYKLL----AGCTGIPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYR  125 (293)
T ss_dssp             HHHHHHT----TTCTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECC
T ss_pred             HHHHHHh----cCCCCCCEEEEEeecCCccEEEEEec-CCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCCceec
Confidence            9888887    35699999999999999999999999 67999888765 469999999999999999999999999999


Q ss_pred             cCCCCcEEEeeCC--CCCCEEEeecCCCccCCCC--------CCcccccCCcccccccccccCCCCchhhhHHHHHHHHH
Q 009980          167 DLKPENCLFLNDR--EDSPLKIMDFGLSSVEGYT--------DPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYI  236 (521)
Q Consensus       167 dlkp~Nil~~~~~--~~~~~kl~Dfg~a~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~  236 (521)
                      ||||+|||+....  ..+.+||+|||+|+.....        ......+||+.|||||++.+..+++++|||||||++|+
T Consensus       126 DiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~e  205 (293)
T d1csna_         126 DIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMY  205 (293)
T ss_dssp             CCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred             cCCccceeecCcccccCCceEEcccceeEEcccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHH
Confidence            9999999995432  3568999999999764321        12334579999999999999999999999999999999


Q ss_pred             HHhCCCCCCCCCcH---HHHHHHHcCCC-CCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHc
Q 009980          237 LLSGYPPFIAQSNR---QKQQMIMAGEF-SFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLN  298 (521)
Q Consensus       237 ll~g~~pf~~~~~~---~~~~~i~~~~~-~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~  298 (521)
                      |++|.+||.+....   .....+..... .......+++|+++.+++..|+..+|++||+++.+.+
T Consensus       206 lltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~  271 (293)
T d1csna_         206 FLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQG  271 (293)
T ss_dssp             HHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             HHhCCCcCCCccchhHHHHHHHHHhccCCCChHHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence            99999999765433   22333322222 2233444679999999999999999999999876653

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-47  Score=370.90  Aligned_cols=248  Identities=24%  Similarity=0.368  Sum_probs=201.4

Q ss_pred             ecccccccCceEEEEeEEccCC-CcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHH
Q 009980           14 VTDILGRGGFSVVRRGIKKTCG-ETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMR   92 (521)
Q Consensus        14 ~~~~lG~G~~g~V~~a~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   92 (521)
                      +.++||+|+||+||+|++...+ +...||||.+++...                           ......+.+|+.+++
T Consensus        31 ~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~---------------------------~~~~~~~~~E~~~l~   83 (311)
T d1r0pa_          31 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD---------------------------IGEVSQFLTEGIIMK   83 (311)
T ss_dssp             EEEEEEEETTEEEEEEEECC----CEEEEEEEECCCCC---------------------------HHHHHHHHHHHHHHH
T ss_pred             cceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccC---------------------------HHHHHHHHHHHHHHH
Confidence            3678999999999999987532 334689999864211                           122356899999999


Q ss_pred             HHhhccCCCCCccceeEEEEe-CCeEEEEEeccCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCC
Q 009980           93 KIVENVSPHPNVIDLYDVYED-QNGVHLILELCSGGELFDRIVAQ-ERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKP  170 (521)
Q Consensus        93 ~l~~~~~~hpniv~~~~~~~~-~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp  170 (521)
                      ++     +||||+++++++.. ++..++|||||++|+|.+++... ...++..+..++.|++.||.|||+.+|+||||||
T Consensus        84 ~l-----~HpnIv~~~g~~~~~~~~~~lv~E~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~  158 (311)
T d1r0pa_          84 DF-----SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAA  158 (311)
T ss_dssp             TC-----CCTTBCCCCEEEEETTTEEEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred             hC-----CCCCEeEEeEEEEecCCceEEEEEEeecCchhhhhccccccchHHHHHHHHHHHHHhhhhhcccCcccCCccH
Confidence            98     99999999999765 56899999999999999988754 4577888999999999999999999999999999


Q ss_pred             CcEEEeeCCCCCCEEEeecCCCccCCCCC-----CcccccCCcccccccccccCCCCchhhhHHHHHHHHHHHhCCCCCC
Q 009980          171 ENCLFLNDREDSPLKIMDFGLSSVEGYTD-----PVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFI  245 (521)
Q Consensus       171 ~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~  245 (521)
                      +|||+   +.++.+||+|||+++......     ......||+.|+|||.+....++.++||||||+++|+|+||..||.
T Consensus       159 ~NILl---~~~~~~kL~DFG~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~  235 (311)
T d1r0pa_         159 RNCML---DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY  235 (311)
T ss_dssp             GGEEE---CTTCCEEECSSGGGCCTTTTTCCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSC
T ss_pred             HhEeE---CCCCCEEEecccchhhccccccccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCC
Confidence            99999   788999999999998654332     1223468999999999999999999999999999999999666664


Q ss_pred             C-CCcHHHHHHHHcCCCCCchhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcC
Q 009980          246 A-QSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNH  299 (521)
Q Consensus       246 ~-~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h  299 (521)
                      . .+..+....+..+.....   .+.+++++.+||.+||..||++|||+.|+++|
T Consensus       236 ~~~~~~~~~~~i~~g~~~~~---p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~  287 (311)
T d1r0pa_         236 PDVNTFDITVYLLQGRRLLQ---PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR  287 (311)
T ss_dssp             C------CHHHHHTTCCCCC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCHHHHHHHHHcCCCCCC---cccCcHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            4 445556666666654332   25689999999999999999999999999986

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.3e-47  Score=365.83  Aligned_cols=249  Identities=19%  Similarity=0.297  Sum_probs=191.1

Q ss_pred             cccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHH
Q 009980            8 LTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNE   87 (521)
Q Consensus         8 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   87 (521)
                      +..+|.+.+.||+|+||.||+|+.    +++.||||+++...                             ......+.|
T Consensus         1 ~~~~~~l~~~iG~G~fg~Vy~~~~----~g~~vAvK~~~~~~-----------------------------~~~~~~e~e   47 (303)
T d1vjya_           1 IARTIVLQESIGKGRFGEVWRGKW----RGEEVAVKIFSSRE-----------------------------ERSWFREAE   47 (303)
T ss_dssp             CGGGEEEEEEEECCSSSEEEEEEE----TTEEEEEEEECGGG-----------------------------HHHHHHHHH
T ss_pred             CCcEEEEEEEEeeCCCeEEEEEEE----CCEEEEEEEECccc-----------------------------hhHHHHHHH
Confidence            467899999999999999999986    56799999985321                             111223334


Q ss_pred             HHHHHHHhhccCCCCCccceeEEEEeCC----eEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---
Q 009980           88 ILVMRKIVENVSPHPNVIDLYDVYEDQN----GVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ---  160 (521)
Q Consensus        88 ~~~l~~l~~~~~~hpniv~~~~~~~~~~----~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~---  160 (521)
                      +..+.++     +||||+++++++.+.+    .+|+|||||++|+|.+++.+. .++......++.|++.||.|||+   
T Consensus        48 i~~~~~~-----~HpnIv~~~~~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~-~l~~~~~~~~~~~ia~gl~~lH~~~~  121 (303)
T d1vjya_          48 IYQTVML-----RHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIV  121 (303)
T ss_dssp             HHTSTTC-----CCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBC
T ss_pred             HHHHhhC-----CCCcCcceEEEEEeCCCcceEEEEEEecccCCCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHhhh
Confidence            4444455     8999999999997654    689999999999999999764 68999999999999999999996   


Q ss_pred             -----CCCeeccCCCCcEEEeeCCCCCCEEEeecCCCccCCCCC-----CcccccCCcccccccccccCC------CCch
Q 009980          161 -----ANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTD-----PVVGLFGSIDYVSPEALLQDR------ITSK  224 (521)
Q Consensus       161 -----~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~------~~~~  224 (521)
                           +||+||||||+|||+   +.++.+||+|||+++......     ......||+.|+|||++.+..      ++.+
T Consensus       122 ~~~~~~~IvHrDlKp~NILl---~~~~~~Kl~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k  198 (303)
T d1vjya_         122 GTQGKPAIAHRDLKSKNILV---KKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKR  198 (303)
T ss_dssp             STTCBCEEECSCCCGGGEEE---CTTSCEEECCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHH
T ss_pred             hhccCCCeeccccCccceEE---cCCCCeEEEecCccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcc
Confidence                 599999999999999   778999999999998653322     223457999999999987542      5778


Q ss_pred             hhhHHHHHHHHHHHhCCCCCCCCC---------------cHHHHHHHHcCCCCCc-hhhh--hccCHHHHHHHHHhccCC
Q 009980          225 SDMWSLGVILYILLSGYPPFIAQS---------------NRQKQQMIMAGEFSFY-EQTW--KNISSSAKQLISSLLTVD  286 (521)
Q Consensus       225 ~DiwslG~il~~ll~g~~pf~~~~---------------~~~~~~~i~~~~~~~~-~~~~--~~~s~~~~~li~~~l~~d  286 (521)
                      +|||||||++|+|+||.+||....               .......+......+. ...+  ...+..+.+|+.+||+.|
T Consensus       199 ~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~d  278 (303)
T d1vjya_         199 ADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYAN  278 (303)
T ss_dssp             HHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSS
T ss_pred             hhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccchHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccC
Confidence            999999999999999988874322               1222222322222111 1111  223456899999999999


Q ss_pred             CCCCCCHHHHHc
Q 009980          287 PNRRPSAQELLN  298 (521)
Q Consensus       287 p~~R~t~~~~l~  298 (521)
                      |.+|||+.|+++
T Consensus       279 p~~Rps~~ei~~  290 (303)
T d1vjya_         279 GAARLTALRIKK  290 (303)
T ss_dssp             GGGSCCHHHHHH
T ss_pred             HhHCcCHHHHHH
Confidence            999999999986

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=6.6e-45  Score=361.22  Aligned_cols=268  Identities=24%  Similarity=0.390  Sum_probs=201.1

Q ss_pred             ccccc-cceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHH
Q 009980            5 TRKLT-DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDAL   83 (521)
Q Consensus         5 ~~~~~-~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (521)
                      ++.+. ++|++++.||+|+||+||+|+++.  +++.||||++++..                             .....
T Consensus         7 g~~~~~~rY~i~~~LG~G~fg~Vy~~~~~~--~g~~vAvKvi~~~~-----------------------------~~~~~   55 (362)
T d1q8ya_           7 GEPYKDARYILVRKLGWGHFSTVWLAKDMV--NNTHVAMKIVRGDK-----------------------------VYTEA   55 (362)
T ss_dssp             TCEETTTTEEEEEEEEECSSEEEEEEEETT--TTEEEEEEEECSCH-----------------------------HHHHH
T ss_pred             CCCccCCcEEEEEEEeeCCCeEEEEEEECC--CCCEEEEEEEeccc-----------------------------cchHH
Confidence            45555 469999999999999999999988  88999999996421                             12345


Q ss_pred             HHHHHHHHHHHhhcc------CCCCCccceeEEEEe--CCeEEEEEeccCCCchHHHH---HhcCCCCHHHHHHHHHHHH
Q 009980           84 LTNEILVMRKIVENV------SPHPNVIDLYDVYED--QNGVHLILELCSGGELFDRI---VAQERYMEVGAAAVIRQIA  152 (521)
Q Consensus        84 ~~~E~~~l~~l~~~~------~~hpniv~~~~~~~~--~~~~~lv~e~~~gg~L~~~l---~~~~~~~~~~~~~i~~qil  152 (521)
                      ..+|+.+++.+....      ..||||+++++++..  ....+++|+++.++......   .....+++..++.++.||+
T Consensus        56 ~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil  135 (362)
T d1q8ya_          56 AEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLL  135 (362)
T ss_dssp             HHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeeccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHH
Confidence            778999998883211      147899999998854  46677777777665443322   2345789999999999999


Q ss_pred             HHHHHHHH-CCCeeccCCCCcEEEeeCCCC---CCEEEeecCCCccCCCCCCcccccCCcccccccccccCCCCchhhhH
Q 009980          153 EGLAALHQ-ANIVHRDLKPENCLFLNDRED---SPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMW  228 (521)
Q Consensus       153 ~al~~lH~-~~i~H~dlkp~Nil~~~~~~~---~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  228 (521)
                      .||.|||+ .||+||||||+|||+..++..   ..++++|||.|.....  .....+||+.|+|||++.+..|+.++|||
T Consensus       136 ~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~~~~~kl~dfg~s~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  213 (362)
T d1q8ya_         136 LGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDE--HYTNSIQTREYRSPEVLLGAPWGCGADIW  213 (362)
T ss_dssp             HHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTB--CCCSCCSCGGGCCHHHHHTCCCCTHHHHH
T ss_pred             HHHHHHhhhcCcccccCChhHeeeeccCcccccceeeEeeccccccccc--ccccccccccccChhhccccCCCcccccc
Confidence            99999998 899999999999999443221   2489999999976543  33456799999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCcH------HHHHHHHc--CCC-------------------------CC-----------c
Q 009980          229 SLGVILYILLSGYPPFIAQSNR------QKQQMIMA--GEF-------------------------SF-----------Y  264 (521)
Q Consensus       229 slG~il~~ll~g~~pf~~~~~~------~~~~~i~~--~~~-------------------------~~-----------~  264 (521)
                      |+||++++|++|+.||......      ........  +..                         ..           .
T Consensus       214 SlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (362)
T d1q8ya_         214 STACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEK  293 (362)
T ss_dssp             HHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHT
T ss_pred             chHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccc
Confidence            9999999999999999754321      11111100  000                         00           0


Q ss_pred             hhhhhccCHHHHHHHHHhccCCCCCCCCHHHHHcCCcccCC
Q 009980          265 EQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGD  305 (521)
Q Consensus       265 ~~~~~~~s~~~~~li~~~l~~dp~~R~t~~~~l~h~~~~~~  305 (521)
                      ...+...++++++||.+||..||.+|||++|+|+||||+..
T Consensus       294 ~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~Hp~f~~~  334 (362)
T d1q8ya_         294 YKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDT  334 (362)
T ss_dssp             TCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTC
T ss_pred             cccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcCcccCCC
Confidence            00123457889999999999999999999999999999844

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.92  E-value=1.3e-25  Score=200.22  Aligned_cols=179  Identities=19%  Similarity=0.160  Sum_probs=122.3

Q ss_pred             eeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCcccc-ccccccccccHHHHHHHHHH
Q 009980           12 YEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGF-FPTRKQVSVSDALLTNEILV   90 (521)
Q Consensus        12 Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~E~~~   90 (521)
                      |.+++.||+|+||+||+|++.   +++.||||+++.........           .... ................|...
T Consensus         2 ~~vg~~IG~G~~g~Vy~a~~~---~g~~vAvKi~r~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~e~~~   67 (191)
T d1zara2           2 DAIGKLMGEGKESAVFNCYSE---KFGECVVKFHKVGHTSFKKV-----------KEKRDYGDLHFSVLAIRSARNEFRA   67 (191)
T ss_dssp             SEEEEEEEECSSEEEEEEEET---TTEEEEEEEECC------CC-----------CC-------CHHHHHHHHHHHHHHH
T ss_pred             chhCCEeeeCcceEEEEEECC---CCCEEEEEEEecccchhhhh-----------hhhhhhccHHHHHHHHHHHHHHHHH
Confidence            568899999999999999985   57899999986432211000           0000 00000111223345668888


Q ss_pred             HHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCCC
Q 009980           91 MRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKP  170 (521)
Q Consensus        91 l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~~~i~H~dlkp  170 (521)
                      +.++     .|++++..+++.  .  .+++|||+++..+.       .+++..+..++.|++.++.|||++||+||||||
T Consensus        68 l~~l-----~~~~v~~~~~~~--~--~~lvme~~~~~~~~-------~l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP  131 (191)
T d1zara2          68 LQKL-----QGLAVPKVYAWE--G--NAVLMELIDAKELY-------RVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQ  131 (191)
T ss_dssp             HHHT-----TTSSSCCEEEEE--T--TEEEEECCCCEEGG-------GCCCSCHHHHHHHHHHHHHHHHHTTEECSCCST
T ss_pred             HHHc-----cCCCcceEEEec--C--CEEEEEeecccccc-------chhhHHHHHHHHHHHHHHHHHhhCCEEEccCCh
Confidence            8888     899999887653  2  27999999987653       256667788999999999999999999999999


Q ss_pred             CcEEEeeCCCCCCEEEeecCCCccCCCCCCcccccCCcccccc------cccccCCCCchhhhHHHHH
Q 009980          171 ENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSP------EALLQDRITSKSDMWSLGV  232 (521)
Q Consensus       171 ~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aP------E~~~~~~~~~~~DiwslG~  232 (521)
                      +|||+.   . ..++|+|||.|+....+..       ..|...      +.+ .+.|+.++|+||+.-
T Consensus       132 ~NILv~---~-~~~~liDFG~a~~~~~~~~-------~~~l~rd~~~~~~~f-~r~y~~~~d~~s~~~  187 (191)
T d1zara2         132 YNVLVS---E-EGIWIIDFPQSVEVGEEGW-------REILERDVRNIITYF-SRTYRTEKDINSAID  187 (191)
T ss_dssp             TSEEEE---T-TEEEECCCTTCEETTSTTH-------HHHHHHHHHHHHHHH-HHHHCCCCCHHHHHH
T ss_pred             hheeee---C-CCEEEEECCCcccCCCCCc-------HHHHHHHHHHHHHHH-cCCCCCcccHHHHHH
Confidence            999993   2 3489999999976542221       112111      122 356888999999753

>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]

Probab=99.89  E-value=9.1e-23  Score=173.28  Aligned_cols=142  Identities=23%  Similarity=0.433  Sum_probs=130.1

Q ss_pred             CCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccC-CCcH
Q 009980          358 DLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRK-SQGD  435 (521)
Q Consensus       358 ~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~-~~~~  435 (521)
                      .+|++++.+++++|..+|.+++| |+.+||..++...+...+...+..+|+.+|.+++|.|+|.||+.++..... ....
T Consensus         2 ~lt~~e~~~l~~~F~~~D~~~~G~Is~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~   81 (146)
T d1exra_           2 QLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSE   81 (146)
T ss_dssp             CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCCeECHHHHHHHHHhcCCCCCHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHhhccChH
Confidence            47899999999999999999999 999999999999999998899999999999999999999999998865432 2346


Q ss_pred             HHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHh
Q 009980          436 DALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQ  505 (521)
Q Consensus       436 ~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~  505 (521)
                      +.++.+|+.+|.|++|+|+.+||..++..++..      .+++++..+|+.+|.|+||+|+|+||+++|.
T Consensus        82 ~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~------~~~~~~~~i~~~~D~d~dG~i~~~eF~~~l~  145 (146)
T d1exra_          82 EELIEAFKVFDRDGNGLISAAELRHVMTNLGEK------LTDDEVDEMIREADIDGDGHINYEEFVRMMV  145 (146)
T ss_dssp             HHHHHHHHHHSTTCSSCBCHHHHHHHHHHTTCC------CCHHHHHHHHHHHCSSSSSSBCHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhc------CCHHHHHHHHHHhCCCCCCeEeHHHHHHHhc
Confidence            789999999999999999999999999988765      6788999999999999999999999999886

>d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.88  E-value=3.3e-22  Score=169.65  Aligned_cols=143  Identities=17%  Similarity=0.386  Sum_probs=131.7

Q ss_pred             CCCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccC-CCc
Q 009980          357 HDLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRK-SQG  434 (521)
Q Consensus       357 ~~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~-~~~  434 (521)
                      .++|++++.+++++|+.+|.|++| |+.+||..++...|..++...+..++...+.++++.++|.+|...+..... ..+
T Consensus         2 ~~ls~~~i~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (146)
T d1lkja_           2 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDS   81 (146)
T ss_dssp             CCCCHHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCSSSCCEEEHHHHHHHHHHHTCCCCH
T ss_pred             CCCCHHHHHHHHHHHHHHCCCCCCcEeHHHHHHHHHhcCCCCCHHHHHHHHHHhccCCcccccHHHHHHHHHHhhccccH
Confidence            468999999999999999999999 999999999999999999899999999999999999999999998877543 345


Q ss_pred             HHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          435 DDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       435 ~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      ++.++.+|+.+|+|++|+|+.+||+.++..++..      +++++++.+|+.+| |+||+|+|+||+++|++
T Consensus        82 ~~~~~~aF~~~D~d~~G~I~~~el~~~l~~~g~~------~~~~~~~~~~~~~d-d~dG~I~~~eF~~~m~k  146 (146)
T d1lkja_          82 EQELLEAFKVFDKNGDGLISAAELKHVLTSIGEK------LTDAEVDDMLREVS-DGSGEINIQQFAALLSK  146 (146)
T ss_dssp             HHHHHHHHHHHCSSSSCEEEHHHHHHHHHHHTCS------CCHHHHHHHHHHHC-CSSSEEEHHHHHHHHCC
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCc------ccHHHHHHHHHhcc-CCCCeEeHHHHHHHhCC
Confidence            6789999999999999999999999999988875      77889999999999 99999999999999864

>d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=99.88  E-value=2.6e-22  Score=169.31  Aligned_cols=138  Identities=17%  Similarity=0.331  Sum_probs=124.6

Q ss_pred             CCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhh-ccCCCcHH
Q 009980          359 LNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSS-LRKSQGDD  436 (521)
Q Consensus       359 ~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~-~~~~~~~~  436 (521)
                      ++++++++++++|..+|.+++| |+.+||..+|+.+|..++..++..++    .+++|.|+|.||+.++.. +.....++
T Consensus         1 L~~~qi~e~~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~el~~~~----~~~~~~i~~~eF~~~~~~~~~~~~~~~   76 (142)
T d1wdcb_           1 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAML----KEAPGPLNFTMFLSIFSDKLSGTDSEE   76 (142)
T ss_dssp             CCHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHHHHSSCCCHHHHHHHH----TTSSSCCCHHHHHHHHHHHTCSCCCHH
T ss_pred             CCHHHHHHHHHHHHHHcCCCCCcCChHHHHHHHHHhhcCCCHHHHHHHH----HhccCccccccccccccccccccchhh
Confidence            4789999999999999999999 99999999999999999888887776    367899999999998876 34455678


Q ss_pred             HHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhcC
Q 009980          437 ALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRD  507 (521)
Q Consensus       437 ~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~~  507 (521)
                      .++.+|+.||.|++|+|+.+||+.++..++..      ++++++..+|+.+|.| +|+|+|+||+++|+..
T Consensus        77 ~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~------lt~~e~~~l~~~~d~~-~G~I~y~eF~~~l~~~  140 (142)
T d1wdcb_          77 TIRNAFAMFDEQETKKLNIEYIKDLLENMGDN------FNKDEMRMTFKEAPVE-GGKFDYVKFTAMIKGS  140 (142)
T ss_dssp             HHHHHHHTTCTTCCSCEEHHHHHHHHHHSSSC------CCHHHHHHHHHHCCEE-TTEECHHHHHHHHHTS
T ss_pred             hHHHhhhhhcccCCCcccHHHHHHHHHHcccc------CCHHHHHHHHHHhCCC-CCEEcHHHHHHHHhcC
Confidence            89999999999999999999999999998765      7888999999999998 6999999999999863

>d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=7.5e-22  Score=166.49  Aligned_cols=139  Identities=20%  Similarity=0.376  Sum_probs=127.5

Q ss_pred             CHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhcc-CCCcHHH
Q 009980          360 NEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLR-KSQGDDA  437 (521)
Q Consensus       360 ~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~-~~~~~~~  437 (521)
                      |+++.++++++|..+|.|++| |+..||..+++..+...+...+.+++..+|.+++|.|++.||...+.... .....+.
T Consensus         1 t~~~~~elk~~F~~~D~~~~G~Is~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~   80 (141)
T d2obha1           1 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEE   80 (141)
T ss_dssp             CHHHHHHHHHHHHTTCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHcCCCCCeEeHHHHHHHHHhcCCchhHHHHHHHHHhhccCCCCeechHHHHHHHHHHHhhhccHHH
Confidence            578889999999999999999 99999999999999999999999999999999999999999999886532 2234577


Q ss_pred             HHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHH
Q 009980          438 LRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAM  504 (521)
Q Consensus       438 l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~  504 (521)
                      ++.+|..+|.+++|+|+.++|..++..++..      ++++++..+|+.+|.|+||+|+|+||+++|
T Consensus        81 l~~~f~~~d~~~~G~i~~~el~~~l~~~g~~------l~~~e~~~l~~~~D~d~dG~i~~~EF~~~m  141 (141)
T d2obha1          81 ILKAFKLFDDDETGKISFKNLKRVAKELGEN------LTDEELQEMIDEADRDGDGEVSEQEFLRIM  141 (141)
T ss_dssp             HHHHHHHHCTTCSSSBCHHHHHHHHHHTTCC------CCHHHHHHHHHHHCTTSSSSBCHHHHHHHH
T ss_pred             HHHHHHHhcccCCCCccHHHHHHHHHHhCCC------CCHHHHHHHHHHHCCCCCCCEeHHHHHHhC
Confidence            9999999999999999999999999998765      778899999999999999999999999986

>d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.86  E-value=4.7e-21  Score=169.94  Aligned_cols=163  Identities=25%  Similarity=0.424  Sum_probs=136.7

Q ss_pred             HHHHhhhccCCCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCC-cchHHHHHHHHcCCCCcceeHHHHHHH
Q 009980          348 KKLKNLLGSHDLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSL-VPLAPRIFDLFDNNRDGTVDMREILCG  425 (521)
Q Consensus       348 ~~l~~l~~~~~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~-~~~~~~~f~~~D~~~~g~I~~~ef~~~  425 (521)
                      ..+.++...+.+++.++..|.+.|...+  ++| ++..||..++..++.... .+.+.++|+.+|.|++|.|+|.||+.+
T Consensus        11 e~l~~l~~~t~fs~~Ei~~l~~~F~~~~--~~G~i~~~ef~~~~~~~~~~~~~~~~~~~if~~~D~~~~G~I~~~Ef~~~   88 (190)
T d1fpwa_          11 DDLTCLKQSTYFDRREIQQWHKGFLRDC--PSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITV   88 (190)
T ss_dssp             HHHHHHTTTCCSTHHHHHHHHHHHHHHC--TTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEECHHHHHHH
T ss_pred             HHHHHHHHHcCCCHHHHHHHHHHHHHHC--CCCCccHHHHHHHHHHHCCCCChHHHHHHHHHHhCcCCCCcccHHHHHHH
Confidence            4567788888999999999999996554  467 999999999998865544 345789999999999999999999999


Q ss_pred             HhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCC------CCCCCCChhHHHHHHHHhcCCCCcceeHHH
Q 009980          426 FSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDC------LPVDITEPGKLDEIFDLMDANNDGKVTFDE  499 (521)
Q Consensus       426 ~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~------~~~~~~~~~~~~~~f~~~D~~~dG~I~~~E  499 (521)
                      +..+.....++.++.+|+.||.|++|.|+.+|+..++.......      ...+...++.++.+|+.+|.|+||.|+++|
T Consensus        89 ~~~~~~~~~~e~~~~~F~~~D~d~dG~is~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~if~~~D~d~dG~Is~~E  168 (190)
T d1fpwa_          89 LSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDE  168 (190)
T ss_dssp             HHHHSCCCSTHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCCCCHHHHHHHHHHHHTTTCSSEEEHHH
T ss_pred             HHHHccCchHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHHhcccccCCCchhhhHHHHHHHHHHHhCCCCCCcCcHHH
Confidence            99888888889999999999999999999999999987642210      011122346789999999999999999999


Q ss_pred             HHHHHhcCccHHH
Q 009980          500 FRAAMQRDSSLQD  512 (521)
Q Consensus       500 f~~~~~~~~~~~~  512 (521)
                      |+++++++|.+.+
T Consensus       169 F~~~~~~~p~i~~  181 (190)
T d1fpwa_         169 FREGSKVDPSIIG  181 (190)
T ss_dssp             HHHHHHSSTTHHH
T ss_pred             HHHHHHHCHHHHH
Confidence            9999999998864

>d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=99.86  E-value=1.5e-21  Score=166.70  Aligned_cols=143  Identities=18%  Similarity=0.277  Sum_probs=125.7

Q ss_pred             CCHHHHHHHHHHHHhhhc--CCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhcc--CCC
Q 009980          359 LNEEEIQNLRIHFRTICA--NGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLR--KSQ  433 (521)
Q Consensus       359 ~~~~~~~~l~~~F~~~D~--~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~--~~~  433 (521)
                      +|++++++++++|..||.  |++| |+..||..+|+.+|..++.+++..+. ..|.+++|.|+|+||+.++....  ...
T Consensus         1 Ls~eqi~~l~~~F~~fD~~~~~dG~I~~~el~~~l~~lG~~~t~~e~~~~~-~~~~~~~~~i~~~eFl~~~~~~~~~~~~   79 (152)
T d1wdcc_           1 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVG-GTHKMGEKSLPFEEFLPAYEGLMDCEQG   79 (152)
T ss_dssp             CCHHHHHHHHHHHHHHHHHTCSSSCEEGGGHHHHHHHTTCCCCHHHHHHTT-CCSSTTSCEECHHHHHHHHHHHTTSCCC
T ss_pred             CCHHHHHHHHHHHHHHCcCCCCCCeECHHHHHHHHHHhccCccHhhhhhhh-hhhccccccccccccccccccccccchh
Confidence            478899999999999995  7889 99999999999999999888887754 45888999999999999887643  235


Q ss_pred             cHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCC--CCcceeHHHHHHHHhcCc
Q 009980          434 GDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDAN--NDGKVTFDEFRAAMQRDS  508 (521)
Q Consensus       434 ~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~--~dG~I~~~Ef~~~~~~~~  508 (521)
                      ..+++..+|+.||.+++|+|+.+||+.++..++..      +++++++.+++.+|.+  ++|+|+|+||++.|..+|
T Consensus        80 ~~~~l~~aF~~~D~~~~G~I~~~el~~~l~~~g~~------ls~~e~~~l~~~~d~~~d~~G~I~y~eF~~~~~~~p  150 (152)
T d1wdcc_          80 TFADYMEAFKTFDREGQGFISGAELRHVLTALGER------LSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMAGP  150 (152)
T ss_dssp             CHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSSSC------CCHHHHHHHHHHHTCCCCTTSEEEHHHHHHHHHHCS
T ss_pred             HHHhhhhhhhccccccCccchHHHHHHHHHHcCCC------CCHHHHHHHHHHhccCCCCCCEEEHHHHHHHHhcCC
Confidence            66789999999999999999999999999998775      7888999999999865  468999999999988765

>d2mysb_ a.39.1.5 (B:) Myosin Essential Chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.86  E-value=2.1e-21  Score=164.28  Aligned_cols=141  Identities=18%  Similarity=0.327  Sum_probs=124.0

Q ss_pred             CCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhc-cCCCcHH
Q 009980          359 LNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSL-RKSQGDD  436 (521)
Q Consensus       359 ~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~-~~~~~~~  436 (521)
                      ++++++.+++++|..+|.+++| |+.+||..+|+.+|..++.+   +++..++.+++|.|+|.+|+.++... ......+
T Consensus         1 f~~~qi~el~e~F~~~D~~~~G~I~~~e~~~~l~~lg~~~~~~---~~~~~~~~~~~g~i~~~eF~~~~~~~~~~~~~~~   77 (145)
T d2mysb_           1 FDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKN---EELDAMIKEASGPINFTVFLTMFGEKLKGADPED   77 (145)
T ss_pred             CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhCCCcchH---HHHHHHHHhccCceeechhhhhhhhcccccchHH
Confidence            5788999999999999999999 99999999999998765543   34555667889999999999988663 4445567


Q ss_pred             HHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhcCc
Q 009980          437 ALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDS  508 (521)
Q Consensus       437 ~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~~~  508 (521)
                      .+..+|+.||.+++|+|+.+||++++..++.+      ++++++..+++.+|.|+||+|+|+||+++|+.++
T Consensus        78 ~l~~aF~~fD~~~~g~I~~~el~~~l~~~g~~------ls~~e~~~~~~~~d~d~dg~I~y~eF~~~l~~~~  143 (145)
T d2mysb_          78 VIMGAFKVLDPDGKGSIKKSFLEELLTTGGGR------FTPEEIKNMWAAFPPDVAGNVDYKNICYVITHGE  143 (145)
T ss_pred             HHHHHHHhhhhcccchhhHHHHHHHHHHcCCC------CCHHHHHHHHHHhCCCCCCeEeHHHHHHHhccCC
Confidence            89999999999999999999999999998875      7888999999999999999999999999998765

>d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.85  E-value=3.9e-21  Score=164.99  Aligned_cols=142  Identities=26%  Similarity=0.443  Sum_probs=126.6

Q ss_pred             CCCHHHHHHHHHHHHhhhcCC-CC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhc----cC
Q 009980          358 DLNEEEIQNLRIHFRTICANG-DN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSL----RK  431 (521)
Q Consensus       358 ~~~~~~~~~l~~~F~~~D~~~-~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~----~~  431 (521)
                      .++++++++++++|..+|.++ +| |+..||..+|+.+|...+..++..++..++.+++|.+++.+|...+...    ..
T Consensus         7 ~Lt~~~~~~l~~~F~~~D~d~~dG~I~~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (156)
T d1dtla_           7 QLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSK   86 (156)
T ss_dssp             GSCHHHHHHHHHHHHHHTTTCGGGSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC----
T ss_pred             HCCHHHHHHHHHHHHHHcCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhhccCCCccchhhhhhhhhhccccccc
Confidence            579999999999999999996 79 9999999999999999999999999999999999999999998765442    23


Q ss_pred             CCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHh
Q 009980          432 SQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQ  505 (521)
Q Consensus       432 ~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~  505 (521)
                      ..+++.++.+|+.||.|++|+|+.+||..++..++..      ++++++..+|+.+|.|+||+|+|+||+++|+
T Consensus        87 ~~~~~~l~~~F~~~D~d~~G~I~~~e~~~~~~~~~~~------ls~~e~~~i~~~~D~d~dG~I~~~eF~~~l~  154 (156)
T d1dtla_          87 GKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGET------ITEDDIEELMKDGDKNNDGRIDYDEFLEFMK  154 (156)
T ss_dssp             -CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC--C------CCHHHHHHHHHHHCTTSSSEEEHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHhCcCCCCcCcHHHHHHHHhhcCCC------CCHHHHHHHHHHhCCCCCCeEeHHHHHHHHc
Confidence            3567789999999999999999999999999887765      7888999999999999999999999999986

>d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.85  E-value=4.8e-21  Score=165.54  Aligned_cols=142  Identities=27%  Similarity=0.491  Sum_probs=127.5

Q ss_pred             CCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhcc----CCC
Q 009980          359 LNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLR----KSQ  433 (521)
Q Consensus       359 ~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~----~~~  433 (521)
                      ++++++.+++++|..+|.|++| |+.+||..+++.++...+...+..++..+|.+++|.+++.||...+....    ...
T Consensus        14 ls~~~i~el~~~F~~~D~d~~G~Is~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~e~~~~~~~~~~~~~~~~   93 (162)
T d1topa_          14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGK   93 (162)
T ss_dssp             SCHHHHHHHHHHHHTTTCSCSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHhccCCchhHHHHHhhhheeccCCCCCeeeehhhhhhhhhhhhhcccC
Confidence            7899999999999999999999 99999999999999999889999999999999999999999988765432    223


Q ss_pred             cHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          434 GDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       434 ~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      ..+.++.+|+.+|.|++|+|+.+||+.++...+..      .+++++..+|+.+|.|+||.|+|+||+++|..
T Consensus        94 ~~~~~~~aF~~~D~d~~G~Is~~e~~~~l~~~~~~------~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~  160 (162)
T d1topa_          94 SEEELANCFRIFDKNADGFIDIEELGEILRATGEH------VTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG  160 (162)
T ss_dssp             HHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTTTCC------CCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHS
T ss_pred             cHHHHHHHHHHHCCCCCCCCcHHHHHHHHHhhCCC------CCHHHHHHHHHHhCCCCCCcEEHHHHHHHHHc
Confidence            45678899999999999999999999999987654      56779999999999999999999999999864

>d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Neurocalcin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.84  E-value=1.5e-20  Score=165.55  Aligned_cols=163  Identities=29%  Similarity=0.475  Sum_probs=136.4

Q ss_pred             HHHHHhhhccCCCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCc-chHHHHHHHHcCCCCcceeHHHHHH
Q 009980          347 TKKLKNLLGSHDLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLV-PLAPRIFDLFDNNRDGTVDMREILC  424 (521)
Q Consensus       347 ~~~l~~l~~~~~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~-~~~~~~f~~~D~~~~g~I~~~ef~~  424 (521)
                      ...+++|.....++.+++..+++.|...  +++| |+.+||..++..++..... +.+.++|+.+|.+++|.|+|.||+.
T Consensus         6 ~~~~~~L~~~t~fs~~ei~~l~~~F~~~--~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~i~~~eFl~   83 (181)
T d1bjfa_           6 PEVMQDLLESTDFTEHEIQEWYKGFLRD--CPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFII   83 (181)
T ss_dssp             HHHHHHHHHHSSCCHHHHHHHHHHHHHH--STTSEEEHHHHHHHHTTTSSSSCCHHHHHHHHHHHCSSCSSEEEHHHHHH
T ss_pred             HHHHHHHHHhcCCCHHHHHHHHHHHHhh--CCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhcCCCCCCcEeHHHHHH
Confidence            4566778888999999999999988554  5677 9999999999988655543 5678999999999999999999999


Q ss_pred             HHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCC------CCCCChhHHHHHHHHhcCCCCcceeHH
Q 009980          425 GFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLP------VDITEPGKLDEIFDLMDANNDGKVTFD  498 (521)
Q Consensus       425 ~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~------~~~~~~~~~~~~f~~~D~~~dG~I~~~  498 (521)
                      ++........++.++.+|+.+|.|++|+|+.+|+..++.........      .....++.++.+|+.+|.|+||.|||+
T Consensus        84 ~~~~~~~~~~~~~~~~~f~~~D~d~dg~i~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~dG~Is~~  163 (181)
T d1bjfa_          84 ALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLE  163 (181)
T ss_dssp             HHHHHTSSCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGGSSHHHHHHHHHHHSCTTCSSEECHH
T ss_pred             HHHHHhhhchHHHHHHHHHHhccCCCCeecHHHHHHHHHHHhhhccccccCCcccccHHHHHHHHHHHhCCCCCCcEeHH
Confidence            99988877888999999999999999999999999998864221110      112345678999999999999999999


Q ss_pred             HHHHHHhcCccHH
Q 009980          499 EFRAAMQRDSSLQ  511 (521)
Q Consensus       499 Ef~~~~~~~~~~~  511 (521)
                      ||++++.++|.+.
T Consensus       164 EF~~~~~~~p~~~  176 (181)
T d1bjfa_         164 EFIRGAKSDPSIV  176 (181)
T ss_dssp             HHHHHHHHCTHHH
T ss_pred             HHHHHHHhCHHHH
Confidence            9999999988654

>d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Guanylate cyclase activating protein 2, GCAP-2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.84  E-value=2.1e-20  Score=165.74  Aligned_cols=153  Identities=23%  Similarity=0.443  Sum_probs=123.7

Q ss_pred             CHHHHHHHHHHHHhhhcC-CCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHH
Q 009980          360 NEEEIQNLRIHFRTICAN-GDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDA  437 (521)
Q Consensus       360 ~~~~~~~l~~~F~~~D~~-~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~  437 (521)
                      +.....+++.+|+.|+.+ ++| |+.+||..+|+..+...+...+.++|+.+|.|++|.|+|.||+.++........++.
T Consensus        16 ~~~~~~ei~~~~~~F~~~~~~G~i~~~Ef~~~l~~~~~~~~~~~~~~lf~~~D~d~dG~I~f~Ef~~~l~~~~~~~~~~~   95 (189)
T d1jbaa_          16 GAADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHK   95 (189)
T ss_dssp             CHHHHHHHHHHHHHHHSSSTTCCEEHHHHHHHHHCCSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCCTHH
T ss_pred             CccCHHHHHHHHHHhcccCCCCeeeHHHHHHHHHHcCCCccHHHHHHHHHHhccCCCCeEeehhHHHHHHhhcccchHHH
Confidence            344444455555555544 468 999999999998888888889999999999999999999999999998877788889


Q ss_pred             HHHHhHhhccCCCcceeHHHHHHHHHhCC-------CCC----CCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          438 LRLCFQMYDIDRSGCITKEEVASMLRALP-------DDC----LPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       438 l~~~f~~~D~d~~G~I~~~e~~~~l~~~~-------~~~----~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      ++.+|+.||.|++|.|+.+|+..++..+.       ...    .......++.++.+|+.+|.|+||+|||+||+++|+.
T Consensus        96 ~~~~F~~~D~d~~g~i~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~if~~~D~d~dG~Is~~EF~~~~~~  175 (189)
T d1jbaa_          96 LKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGARR  175 (189)
T ss_dssp             HHHHHHHHCSSCSSCBCHHHHHHHHHHHHHHHHHSSCCTTSSTTTCCCCHHHHHHHHHHHHCCSCCSCBCHHHHHHHHTT
T ss_pred             HHHHHhhhccCCCCcccHhHHHHHHHHHHHhhccccccchhhhhccccchHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence            99999999999999999999988775421       000    0011122456789999999999999999999999999


Q ss_pred             CccHHH
Q 009980          507 DSSLQD  512 (521)
Q Consensus       507 ~~~~~~  512 (521)
                      +|.+.+
T Consensus       176 ~p~i~~  181 (189)
T d1jbaa_         176 DKWVMK  181 (189)
T ss_dssp             TTTHHH
T ss_pred             CHHHHH
Confidence            998764

>d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: EHCABP
species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]

Probab=99.84  E-value=7.8e-21  Score=158.62  Aligned_cols=127  Identities=27%  Similarity=0.393  Sum_probs=113.7

Q ss_pred             HHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCC---cHHHHHHHhH
Q 009980          368 RIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQ---GDDALRLCFQ  443 (521)
Q Consensus       368 ~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~---~~~~l~~~f~  443 (521)
                      ..+|+.+|.|++| |+..||..++..++...+.+++..+|+.+|.+++|.|+++||+.++.......   ....++.+|+
T Consensus         3 e~~F~~~D~d~dG~is~~E~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~F~   82 (134)
T d1jfja_           3 EALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLYK   82 (134)
T ss_dssp             HHHHHHHCTTCSSEEEHHHHHHHHHTTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCCcCCCcHHHHHHHHHHcCCCCCHHHHHHHHHHhhhccccccccccccccccccccccccccccccccccc
Confidence            5789999999999 99999999999999998888999999999999999999999999887654332   2456889999


Q ss_pred             hhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHH
Q 009980          444 MYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAM  504 (521)
Q Consensus       444 ~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~  504 (521)
                      .+|.+++|+|+.+|+..++...+          .+.+..+|+.+|.|+||+|+|+||.++|
T Consensus        83 ~~D~~~~g~i~~~el~~~~~~~~----------~~~~~~~~~~~D~d~dG~is~~EF~~~~  133 (134)
T d1jfja_          83 LMDVDGDGKLTKEEVTSFFKKHG----------IEKVAEQVMKADANGDGYITLEEFLEFS  133 (134)
T ss_dssp             HHCCSSSSEEEHHHHHHHHTTTT----------CHHHHHHHHHHHCSSSSEEEHHHHHHHH
T ss_pred             ccccccCCcccHHHHHHHHHhcC----------cHHHHHHHHHHCCCCCCCCCHHHHHHHh
Confidence            99999999999999999987643          3478899999999999999999999987

>d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.84  E-value=1.1e-20  Score=159.81  Aligned_cols=135  Identities=13%  Similarity=0.258  Sum_probs=118.3

Q ss_pred             HHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCC--CCcceeHHHHHHHHhhccC---CCcHHH
Q 009980          364 IQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNN--RDGTVDMREILCGFSSLRK---SQGDDA  437 (521)
Q Consensus       364 ~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~--~~g~I~~~ef~~~~~~~~~---~~~~~~  437 (521)
                      .++++++|..+|.|++| |+.+||..+|+.+|..++..++..++..++.+  ++|.|+|+||..++.....   ....+.
T Consensus         3 ~eelke~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~e~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~   82 (145)
T d2mysc_           3 ADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITFEEFLPMLQAAANNKDQGTFED   82 (145)
T ss_pred             HHHHHHHHHHHcCCCCCeECHHHHHHHHHHhhhcchhhhhHHHHHHHhhcccccCccchhHHHHHHhhhhhccccchHHH
Confidence            35688999999999999 99999999999999999999999999988655  6889999999998866332   235667


Q ss_pred             HHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHh
Q 009980          438 LRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQ  505 (521)
Q Consensus       438 l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~  505 (521)
                      +..+|+.+|.|++|+|+.+||+.++..++..      .++++++.+++. |.|+||.|+|+||.++|.
T Consensus        83 l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~------~~~~e~~~l~~~-~~d~dG~I~y~eF~~~ll  143 (145)
T d2mysc_          83 FVEGLRVFDKEGNGTVMGAELRHVLATLGEK------MTEEEVEELMKG-QEDSNGCINYEAFVKHIM  143 (145)
T ss_pred             HHHHHHHhhcCCCCEEcHHHHHHHHHHhCCC------CCHHHHHHHHhh-cCCCCCeEEHHHHHHHHh
Confidence            9999999999999999999999999988765      677899999975 889999999999998774

>d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=2.8e-20  Score=164.58  Aligned_cols=164  Identities=27%  Similarity=0.480  Sum_probs=134.4

Q ss_pred             HHHHHhhhccCCCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCc-chHHHHHHHHcCCCCcceeHHHHHH
Q 009980          347 TKKLKNLLGSHDLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLV-PLAPRIFDLFDNNRDGTVDMREILC  424 (521)
Q Consensus       347 ~~~l~~l~~~~~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~-~~~~~~f~~~D~~~~g~I~~~ef~~  424 (521)
                      ...++++...+.++++++..|.+.|...|  ++| ++..++..++..++..... +.+..+|+.+|.|++|.|+|.||+.
T Consensus         7 ~e~i~~l~~~t~fs~~Ei~~l~~~F~~~~--~~g~i~~~ef~~~~~~~~~~~~~~~~~~~if~~~d~~~dg~I~~~EF~~   84 (187)
T d1g8ia_           7 PEVVEELTRKTYFTEKEVQQWYKGFIKDC--PSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFIQ   84 (187)
T ss_dssp             HHHHHHHHHTSSSCHHHHHHHHHHHHHHC--TTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTCSSEEEHHHHHH
T ss_pred             HHHHHHHHHhcCCCHHHHHHHHHHHHHHC--CCCCcCHHHHHHHHHHhcCCCCHHHHHHHHHHHhCcCCCCCCcHHHHHH
Confidence            34566777788899999999998887654  567 9999999999988765544 4567899999999999999999999


Q ss_pred             HHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCC----CCC--CCCCCCChhHHHHHHHHhcCCCCcceeHH
Q 009980          425 GFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALP----DDC--LPVDITEPGKLDEIFDLMDANNDGKVTFD  498 (521)
Q Consensus       425 ~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~----~~~--~~~~~~~~~~~~~~f~~~D~~~dG~I~~~  498 (521)
                      ++........++.++.+|+.||.|++|+|+.+|+..++..+.    ...  .......++.++.+|+.+|.|+||+|+++
T Consensus        85 ~l~~~~~~~~~e~l~~~F~~~D~d~dG~i~~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~if~~~D~d~dG~Is~~  164 (187)
T d1g8ia_          85 ALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQ  164 (187)
T ss_dssp             HHHHHHHCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHHC-----CCGGGSSHHHHHHHHHHHHCSSCSSEEEHH
T ss_pred             HHHHhccCchhhhHHHHHHHHhcCCCCeEcHHHHHHHHHHHhhhhcccccCchhhccHHHHHHHHHHHhCCCCCCcEeHH
Confidence            999877777888999999999999999999999999886431    110  01111334678899999999999999999


Q ss_pred             HHHHHHhcCccHHH
Q 009980          499 EFRAAMQRDSSLQD  512 (521)
Q Consensus       499 Ef~~~~~~~~~~~~  512 (521)
                      ||++++..+|.+.+
T Consensus       165 EF~~~~~~~p~~~~  178 (187)
T d1g8ia_         165 EFQEGSKADPSIVQ  178 (187)
T ss_dssp             HHHHHHHHCHHHHH
T ss_pred             HHHHHHHHCHHHHH
Confidence            99999999887754

>d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Recoverin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.83  E-value=1.4e-20  Score=168.69  Aligned_cols=162  Identities=23%  Similarity=0.352  Sum_probs=134.3

Q ss_pred             HHHHhhhccCCCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCC-cchHHHHHHHHcCCCCcceeHHHHHHH
Q 009980          348 KKLKNLLGSHDLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSL-VPLAPRIFDLFDNNRDGTVDMREILCG  425 (521)
Q Consensus       348 ~~l~~l~~~~~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~-~~~~~~~f~~~D~~~~g~I~~~ef~~~  425 (521)
                      ..++.|.....++.+++..+.+.|...  +++| |+.+||..++..++.... .+.+..+|+.+|.|++|.|+|.||+.+
T Consensus        11 e~l~~l~~~t~f~~~ei~~l~~~F~~~--~~~G~is~~EF~~~l~~~~~~~~~~~~~~~if~~~D~~~~G~I~f~EF~~~   88 (201)
T d1omra_          11 EILEELQLNTKFTEEELSSWYQSFLKE--CPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIA   88 (201)
T ss_dssp             HHHHHHGGGCSSCHHHHHHHHHHHHHH--CTTSEEEHHHHHHHHHHHCTTSCCHHHHHHHHHTTTSCSSSEEEHHHHHHH
T ss_pred             HHHHHHHHhCCCCHHHHHHHHHHHHHH--CcCCCccHHHHHHHHHHhcCCCCHHHHHHHHHHHhccCCCCeEeehhHHHH
Confidence            346778888999999999999999544  5678 999999999998876544 456689999999999999999999999


Q ss_pred             HhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCC--------CCCCCChhHHHHHHHHhcCCCCcceeH
Q 009980          426 FSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCL--------PVDITEPGKLDEIFDLMDANNDGKVTF  497 (521)
Q Consensus       426 ~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~--------~~~~~~~~~~~~~f~~~D~~~dG~I~~  497 (521)
                      +..+.....++.++.+|+.||.|++|+|+.+||..++........        ......++.++.+|+.+|.|+||.|+|
T Consensus        89 ~~~~~~~~~~~~l~~~F~~~D~d~~G~is~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~dG~Is~  168 (201)
T d1omra_          89 LHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHLPEDENTPEKRAEKIWGFFGKKDDDKLTE  168 (201)
T ss_dssp             HHHHHSSCGGGSHHHHHHHHCTTCSSSBCHHHHHHHHHHHHTTSCHHHHTTSCGGGSSHHHHHHHHHHHTTCCTTCCBCH
T ss_pred             HHhhcccchHHHHHHHHHHHccCCCCccCHHHHHHHHHHHHhhcChhhhhhhhhhhccHHHHHHHHHHHhCCCCCCCCcH
Confidence            988887788889999999999999999999999998876432110        011122346788999999999999999


Q ss_pred             HHHHHHHhcCccHH
Q 009980          498 DEFRAAMQRDSSLQ  511 (521)
Q Consensus       498 ~Ef~~~~~~~~~~~  511 (521)
                      +||++.+..+|.+.
T Consensus       169 ~EF~~~~~~~~~~~  182 (201)
T d1omra_         169 KEFIEGTLANKEIL  182 (201)
T ss_dssp             HHHHHHHHHCHHHH
T ss_pred             HHHHHHHHHCHHHH
Confidence            99999999888765

>d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

Probab=99.83  E-value=1.5e-21  Score=171.81  Aligned_cols=143  Identities=27%  Similarity=0.459  Sum_probs=130.3

Q ss_pred             CCCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcH
Q 009980          357 HDLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGD  435 (521)
Q Consensus       357 ~~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~  435 (521)
                      ..++++++.+|+++|+.+|.|++| |+.+||..+++.++..++...+..+|+.+|.+++|.|+|.+|+.++.........
T Consensus         2 ~~Lt~~ei~~l~~~F~~~D~d~dG~Is~~e~~~~l~~l~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~   81 (182)
T d1s6ia_           2 ERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLERE   81 (182)
T ss_dssp             CSSSCTTTCSHHHHHHTTSSSSSSCEEHHHHHHHHTTTTCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCCC
T ss_pred             CCCCHHHHHHHHHHHHHHcCCCcCCCCHHHHHHHHHHcCCccccccchhhhhhhhccccccchHHHHHHHHHhhcccccH
Confidence            357888899999999999999999 9999999999999999999999999999999999999999999988776666666


Q ss_pred             HHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhcC
Q 009980          436 DALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRD  507 (521)
Q Consensus       436 ~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~~  507 (521)
                      +.+..+|+.+|.+++|+|+.++|..++..++        .+++++..+|+.+|.|+||+|+|+||+++|+..
T Consensus        82 e~l~~aF~~~D~d~~G~i~~~el~~~l~~~g--------l~~~ev~~~f~~~D~d~DG~Is~~EF~~~m~~~  145 (182)
T d1s6ia_          82 ENLVSAFSYFDKDGSGYITLDEIQQACKDFG--------LDDIHIDDMIKEIDQDNDGQIDYGEFAAMMRKR  145 (182)
T ss_dssp             CSTHHHHHHTTTTCSSEEEHHHHHHTTTTTT--------CCTTHHHHHHHHHCSSSSSEEETTHHHHTTSCC
T ss_pred             HHHHHHHHHHhhcCCCccchhhhhhhhhhcC--------ccHHHHHHHHHHhhcCCCCeEeHHHHHHHHHhC
Confidence            7899999999999999999999999887654        355689999999999999999999999999874

>d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin regulatory subunit (B-chain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=1.6e-20  Score=162.49  Aligned_cols=146  Identities=25%  Similarity=0.518  Sum_probs=121.8

Q ss_pred             cCCCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccC-CC
Q 009980          356 SHDLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRK-SQ  433 (521)
Q Consensus       356 ~~~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~-~~  433 (521)
                      .+.+|++++.+++++|+.+|.|++| |+.+||..++....    .+.+.++|+.+|.+++|.|+|+||+.++..... ..
T Consensus         7 ~t~ft~eei~~l~~~F~~~D~d~~G~I~~~E~~~~~~~~~----~~~~~~l~~~~d~~~~g~i~~~EFl~~~~~~~~~~~   82 (165)
T d1auib_           7 CSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQ----NPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGD   82 (165)
T ss_dssp             CCSCCHHHHHHHHHHHHHHCTTCCSEECHHHHTTSHHHHT----CTTHHHHHHHHCTTCSSSEEHHHHHHHHGGGCTTCC
T ss_pred             cCCCCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHhhhccC----CHHHHHHHHHHccccchhhhhhhhhhhccccccchh
Confidence            3568999999999999999999999 99999987665432    356889999999999999999999999988653 34


Q ss_pred             cHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          434 GDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       434 ~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      ..+.++.+|+.+|.|++|+|+.+|+..++.......... ...++.+..+|..+|.|+||+|+++||.++|+.
T Consensus        83 ~~~~~~~~f~~~d~d~~g~Is~~el~~~l~~~~~~~~~~-~~~~~~~~~~~~~~D~~~dG~Is~~EF~~i~~~  154 (165)
T d1auib_          83 KEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKD-TQLQQIVDKTIINADKDGDGRISFEEFCAVVGG  154 (165)
T ss_dssp             HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHTTSSCH-HHHHHHHHHHHHHHCTTSSSSEEHHHHHHHHGG
T ss_pred             hHHHHHHHHHHhcccccccccHHHHHHHHHHhccccCch-HHHHHHHHHHHHHcCCCCCCcEeHHHHHHHHhc
Confidence            567799999999999999999999999987643321111 123456888999999999999999999999985

>d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin B-like protein 2
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.83  E-value=3.7e-20  Score=163.19  Aligned_cols=157  Identities=29%  Similarity=0.468  Sum_probs=128.7

Q ss_pred             hhccCCCCHHHHHHHHHHHHhhhcC--CCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhc
Q 009980          353 LLGSHDLNEEEIQNLRIHFRTICAN--GDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSL  429 (521)
Q Consensus       353 l~~~~~~~~~~~~~l~~~F~~~D~~--~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~  429 (521)
                      +...+.++++++..|++.|..+|.+  ++| |+.+||..++...+... .+.+..+|+.+|.|++|.|+|.||+.++...
T Consensus         5 l~~~t~Fs~~ei~~L~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~-~~~~~~lf~~~d~~~dg~I~f~EFl~~l~~~   83 (183)
T d2zfda1           5 LARDTVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKE-SLFADRVFDLFDTKHNGILGFEEFARALSVF   83 (183)
T ss_dssp             HHHHSSCCHHHHHHHHHHHHHHHTSSSCSSSBCHHHHHHHHHSCSSCC-CHHHHHHHHHHCSSCSSSBCHHHHHHHHHHT
T ss_pred             HhhhCCCCHHHHHHHHHHHHHHCcCCCCCCcCcHHHHHHHHHhcCCCC-CHHHHHHHHHHccCCCCcCcHHHHHHHHHhh
Confidence            4456789999999999999999976  578 99999999998776654 3578999999999999999999999998776


Q ss_pred             cC-CCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhC----CCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHH
Q 009980          430 RK-SQGDDALRLCFQMYDIDRSGCITKEEVASMLRAL----PDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAM  504 (521)
Q Consensus       430 ~~-~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~----~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~  504 (521)
                      .. ...++.++.+|+.+|.|++|.|+.+|+..++...    +.. . .+...++.+..+|+.+|.|+||+|+|+||++++
T Consensus        84 ~~~~~~~~~~~~~F~~~D~d~~G~Is~~e~~~~~~~~~~~~~~~-~-~~~~~~~~~~~if~~~D~d~dG~Is~~EF~~~~  161 (183)
T d2zfda1          84 HPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMN-L-KDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLV  161 (183)
T ss_dssp             STTSCHHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTCC-C-CHHHHHHHHHHHHHHHCSSCSSEECHHHHHHHH
T ss_pred             hccCcHHHHHHHhhcccccCCCCCccHHHHHHHHHHHHhhhhcc-c-chHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHH
Confidence            43 4567789999999999999999999999987643    211 0 000112346778999999999999999999999


Q ss_pred             hcCccHHH
Q 009980          505 QRDSSLQD  512 (521)
Q Consensus       505 ~~~~~~~~  512 (521)
                      ..+|.+.+
T Consensus       162 ~~~p~~~~  169 (183)
T d2zfda1         162 LRHPSLLK  169 (183)
T ss_dssp             HHSGGGGG
T ss_pred             HHCHHHHH
Confidence            99887643

>d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Kchip1, Kv4 potassium channel-interacting protein
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.82  E-value=4.1e-20  Score=162.17  Aligned_cols=160  Identities=26%  Similarity=0.457  Sum_probs=128.9

Q ss_pred             HhhhccCCCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCC-cchHHHHHHHHcCCCCcceeHHHHHHHHhh
Q 009980          351 KNLLGSHDLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSL-VPLAPRIFDLFDNNRDGTVDMREILCGFSS  428 (521)
Q Consensus       351 ~~l~~~~~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~-~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~  428 (521)
                      ++|...+.++++++..+.+.|...|  ++| |+.+||..++..++.... .+.+.++|+.+|.|++|.|+++||+.++..
T Consensus         2 ~~l~~~t~ft~~ei~~l~~~F~~~~--~~G~is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~~~~g~I~~~EFl~~~~~   79 (178)
T d1s6ca_           2 EQLEAQTNFTKRELQVLYRGFKNEC--PSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSI   79 (178)
T ss_dssp             HHHHHHSSCCHHHHHHHHHHHHHHC--TTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHH
T ss_pred             HHHHhcCCCCHHHHHHHHHHHHHHC--cCCCccHHHHHHHHHHhCCCCCHHHHHHHHHHHHCCCCCCcccHHHHHHHHHH
Confidence            3455667899999999988886554  567 999999999998866543 445689999999999999999999999988


Q ss_pred             ccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhC----CCCC--CCCCCCChhHHHHHHHHhcCCCCcceeHHHHHH
Q 009980          429 LRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRAL----PDDC--LPVDITEPGKLDEIFDLMDANNDGKVTFDEFRA  502 (521)
Q Consensus       429 ~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~----~~~~--~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~  502 (521)
                      +.....++.++.+|+.||.|++|+|+.+|+..++..+    +...  .......++.++.+|+.+|.|+||.||++||.+
T Consensus        80 ~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~DG~Is~~EF~~  159 (178)
T d1s6ca_          80 LLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLE  159 (178)
T ss_dssp             HHHCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHTC-----------CHHHHHHHHHHHCTTCSSEECHHHHHH
T ss_pred             HhccchHHHHHHHHHhhccCCCCeecHHHHHHHHHHHHhhcccccccCCcHHHHHHHHHHHHHHhCCCCCCcEeHHHHHH
Confidence            7777888899999999999999999999998876542    1110  011113355688999999999999999999999


Q ss_pred             HHhcCccHHH
Q 009980          503 AMQRDSSLQD  512 (521)
Q Consensus       503 ~~~~~~~~~~  512 (521)
                      ++..+|++.+
T Consensus       160 ~i~~~~~~~~  169 (178)
T d1s6ca_         160 SCQEDDNIMR  169 (178)
T ss_dssp             HTTSCCHHHH
T ss_pred             HHHHCHHHHH
Confidence            9999988753

>d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Cdc4p
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.82  E-value=1.5e-20  Score=157.88  Aligned_cols=131  Identities=18%  Similarity=0.301  Sum_probs=115.6

Q ss_pred             HHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhcc---CCCcHHHHHH
Q 009980          365 QNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLR---KSQGDDALRL  440 (521)
Q Consensus       365 ~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~---~~~~~~~l~~  440 (521)
                      .+++++|..+|.+++| |+..||..+|+.+|..++.+++..    ++.+++|.|+|++|+.++....   .....+++..
T Consensus         5 ~~fke~F~~~D~d~dG~I~~~el~~~l~~lg~~~t~~ei~~----~~~~~~~~i~~~eF~~~~~~~~~~~~~~~~~~l~~   80 (140)
T d1ggwa_           5 SPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITE----IESTLPAEVDMEQFLQVLNRPNGFDMPGDPEEFVK   80 (140)
T ss_dssp             TTTHHHHHHTCSSSSSEECHHHHHHHHHHTSCCCCHHHHHH----HHTTSCSSEEHHHHHHHHCTTSSSSSSCCHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCeECHHHHHHHHHHHHhhhHHHhhhh----hhccccccccchhhhhhhhhhhhcchhhHHHHHHH
Confidence            4678999999999999 999999999999999988776654    5788999999999999987533   2234678999


Q ss_pred             HhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          441 CFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       441 ~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      +|+.+|.|++|+|+.+||+.++..++.+      +++++++.+++.+|.| ||.|+|+||+++|..
T Consensus        81 aF~~~D~d~~G~I~~~el~~~l~~~g~~------lt~~e~~~l~~~~d~~-dG~I~y~eF~~~m~s  139 (140)
T d1ggwa_          81 GFQVFDKDATGMIGVGELRYVLTSLGEK------LSNEEMDELLKGVPVK-DGMVNYHDFVQMILA  139 (140)
T ss_dssp             HHHTTCSSCSSCCCHHHHHHHHHHHHSC------SCHHHHHHHHHHTTCS-SCCSTTTHHHHHHHC
T ss_pred             HHHHHhccCCCcchHHHHHHHHHHcCCC------CCHHHHHHHHHhhCCC-CCEEeHHHHHHHHhc
Confidence            9999999999999999999999988765      7888999999999988 999999999999864

>d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Programmed cell death 6 protein-like protein
species: Leishmania major [TaxId: 5664]

Probab=99.80  E-value=1.6e-19  Score=158.55  Aligned_cols=130  Identities=17%  Similarity=0.284  Sum_probs=119.9

Q ss_pred             HHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhH
Q 009980          365 QNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQ  443 (521)
Q Consensus       365 ~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~  443 (521)
                      ++++++|+.+|.|++| |+.+||..+|+.++...+..++..+++.+|.|++|.|++.||...+..      ...++.+|+
T Consensus        18 ~~l~~~F~~~D~d~dG~Is~~El~~~l~~l~~~~s~~~~~~l~~~~d~d~~~~i~~~ef~~~~~~------~~~~~~~F~   91 (182)
T d1y1xa_          18 QELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKDLHHF------ILSMREGFR   91 (182)
T ss_dssp             SCHHHHHHHHCTTCSSSBCHHHHHHHHCBTTBCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH------HHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCcCCCCHHHHHHHHHHhcccCchhhhhhhhcccccccccccccccccccccc------ccccccchh
Confidence            4689999999999999 999999999999999999999999999999999999999999987653      346888999


Q ss_pred             hhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          444 MYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       444 ~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      .+|.+++|+|+.+||..++..++..      .++++++.+|+.+|.|+||.|+|+||+.+|..
T Consensus        92 ~~D~~~~g~I~~~el~~~l~~~g~~------ls~~e~~~i~~~~d~~~dg~I~~~eF~~~~~~  148 (182)
T d1y1xa_          92 KRDSSGDGRLDSNEVRAALLSSGYQ------VSEQTFQALMRKFDRQRRGSLGFDDYVELSIF  148 (182)
T ss_dssp             HHCTTSSSCBCHHHHHHHHHTTSCC------CCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             ccccccchhhhhHHHHHHHHHhCCc------hhHHHHHHHHhhcccCCCCCcCHHHHHHHHHH
Confidence            9999999999999999999988765      67889999999999999999999999999865

>d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Light Chain Mlc1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.80  E-value=7.5e-20  Score=154.85  Aligned_cols=133  Identities=14%  Similarity=0.267  Sum_probs=115.0

Q ss_pred             HHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHH-HHcCCCCcceeHHHHHHHHhhcc------CCCcHHHH
Q 009980          367 LRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFD-LFDNNRDGTVDMREILCGFSSLR------KSQGDDAL  438 (521)
Q Consensus       367 l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~-~~D~~~~g~I~~~ef~~~~~~~~------~~~~~~~l  438 (521)
                      ++++|..+|.+++| |+.+||..+|+.+|..++.+++..++. ..+.+.+|.|+|++|...+....      .....+.+
T Consensus         4 ~k~~F~~~D~d~~G~I~~~el~~~l~~lg~~~s~~ei~~l~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~~~~~~~~~l   83 (146)
T d1m45a_           4 NKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAKTEDF   83 (146)
T ss_dssp             CTTCHHHHCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGCCCTHHH
T ss_pred             HHHHHHHHcCCCcCCCCHHHHHHHHHHcCCchhHHHHhhhhccccccccccccccchhhhhhhhhcccccccccchHHHH
Confidence            46789999999999 999999999999999999999999886 45666779999999999875431      23445789


Q ss_pred             HHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHh
Q 009980          439 RLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQ  505 (521)
Q Consensus       439 ~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~  505 (521)
                      ..+|+.+|.+++|+|+.+||..++..++..      ++++++..+|..+|.|+||.|+|+||++.+.
T Consensus        84 ~~~F~~~D~~~~G~I~~~el~~~l~~~g~~------l~~~ei~~l~~~~D~d~dG~I~y~eF~~~i~  144 (146)
T d1m45a_          84 VKAFQVFDKESTGKVSVGDLRYMLTGLGEK------LTDAEVDELLKGVEVDSNGEIDYKKFIEDVL  144 (146)
T ss_dssp             HHHHHTTCSSSSSEEEHHHHHHHHHHSTTC------CCHHHHHHHHTTCCCCTTSEEEHHHHHHHHH
T ss_pred             HHHHHhhccccccccchhhhhhhhcccCCc------chHHHHHHHHHHhCCCCCCcEEHHHHHHHHH
Confidence            999999999999999999999999998765      7788999999999999999999999988765

>d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium- and integrin-binding protein, CIB
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=1.4e-19  Score=158.41  Aligned_cols=160  Identities=16%  Similarity=0.318  Sum_probs=122.4

Q ss_pred             HhhhccCCCCHHHHHHHHHHHHhhhcCCCC-C--------CHHHHHHHHHhcCCCCCcchHHHHHHHHcCC-CCcceeHH
Q 009980          351 KNLLGSHDLNEEEIQNLRIHFRTICANGDN-A--------TLSEFEEVLKAMNMSSLVPLAPRIFDLFDNN-RDGTVDMR  420 (521)
Q Consensus       351 ~~l~~~~~~~~~~~~~l~~~F~~~D~~~~g-i--------~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~-~~g~I~~~  420 (521)
                      .++...+.++++++..+++.|..+|+++++ +        +.+++..+. .+.   ..+...++|+.+|.| ++|.|+|+
T Consensus         3 ~~~~~~T~ft~~EI~~l~~~F~~l~~~~~~~~~~~~~~~i~~~e~~~~~-~l~---~~~~~~rif~~fd~~~~~g~I~f~   78 (180)
T d1xo5a_           3 AEYQDLTFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILSLP-ELK---ANPFKERICRVFSTSPAKDSLSFE   78 (180)
T ss_dssp             GGGSCCCCSCHHHHHHHHHHHHTTSCGGGCSHHHHHHCCEEHHHHHTSH-HHH---TCTTHHHHHHHHCCSTTCCEECHH
T ss_pred             HHHHHhcCCCHHHHHHHHHHHHHHCcCccccccccccceEcHHHHhcCc-ccc---cChHHHHHHHhccCCCCCCcCcHH
Confidence            456677889999999999999999888765 3        344443221 111   134678999999987 69999999


Q ss_pred             HHHHHHhhcc-CCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCC---CCCChhHHHHHHHHhcCCCCccee
Q 009980          421 EILCGFSSLR-KSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPV---DITEPGKLDEIFDLMDANNDGKVT  496 (521)
Q Consensus       421 ef~~~~~~~~-~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~---~~~~~~~~~~~f~~~D~~~dG~I~  496 (521)
                      ||+.++.... ....++.++.+|+.||.|++|+|+.+|+..++..+.......   +...++.+..+|+.+|.|+||+||
T Consensus        79 EFv~~l~~~~~~~~~~~kl~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~D~d~dG~Is  158 (180)
T d1xo5a_          79 DFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTIN  158 (180)
T ss_dssp             HHHHHHHHHSTTSCHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHC------CCCCTTHHHHHHHHHHHHCTTCSSSBC
T ss_pred             HHHHHHHHHhhcCCHHHHHHHhhccccCCCCCeeeHHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHhCCCCCCcCc
Confidence            9999998765 446678999999999999999999999999998753221111   111123467789999999999999


Q ss_pred             HHHHHHHHhcCccHHHHH
Q 009980          497 FDEFRAAMQRDSSLQDVV  514 (521)
Q Consensus       497 ~~Ef~~~~~~~~~~~~~~  514 (521)
                      |+||.+++.++|.+.+..
T Consensus       159 ~~EF~~~~~~~P~~~~~f  176 (180)
T d1xo5a_         159 LSEFQHVISRSPDFASSF  176 (180)
T ss_dssp             HHHHHHHHHHCHHHHHHH
T ss_pred             HHHHHHHHHhCHHHHhhC
Confidence            999999999999876543

>d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Apoptosis-linked protein alg-2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.78  E-value=5.9e-19  Score=154.79  Aligned_cols=134  Identities=19%  Similarity=0.250  Sum_probs=118.9

Q ss_pred             HHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCC-CCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHH
Q 009980          363 EIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMS-SLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRL  440 (521)
Q Consensus       363 ~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~-~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~  440 (521)
                      +.+.|..+|+.+|.|++| |+.+||..+|+.++.. .+.+.++.+++.+|.+++|.|+|+||+.++...      ..++.
T Consensus        17 ~~~~L~~iF~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EFl~~~~~~------~~~~~   90 (181)
T d1hqva_          17 DQSFLWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYI------TDWQN   90 (181)
T ss_dssp             CHHHHHHHHHHHCTTCCSSBCHHHHHHHCCCSSSSCCCHHHHHHHHHHHCCSSSSSBCHHHHHHHHHHH------HHHHH
T ss_pred             cHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCcccHHHHHHHhhccccccccchhhhHHHhhhhhc------ccccc
Confidence            446789999999999999 9999999999988765 466788999999999999999999999987653      46889


Q ss_pred             HhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhcCc
Q 009980          441 CFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDS  508 (521)
Q Consensus       441 ~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~~~  508 (521)
                      +|+.+|.+++|+|+.+||+.++...+..      .+++++..+++.+|.+++|+|+|+||+.++...+
T Consensus        91 ~f~~~D~~~~G~i~~~el~~~l~~~~~~------l~~e~~~~~~~~~d~~~dg~Is~~eF~~~~~~l~  152 (181)
T d1hqva_          91 VFRTYDRDNSGMIDKNELKQALSGFGYR------LSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQ  152 (181)
T ss_dssp             HHHHHCTTCCSSBCHHHHHHHHHHHTBC------CCHHHHHHHHHHHCSSCSSCBCHHHHHHHHHHHH
T ss_pred             ccccccccccchhhhHHHHHHHHHcCCc------chhHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHH
Confidence            9999999999999999999999887654      6788999999999999999999999999886533

>d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=2.5e-19  Score=150.28  Aligned_cols=132  Identities=14%  Similarity=0.270  Sum_probs=113.0

Q ss_pred             HHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcC--CCCcceeHHHHHHHHhhccCC---CcHHHHH
Q 009980          366 NLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDN--NRDGTVDMREILCGFSSLRKS---QGDDALR  439 (521)
Q Consensus       366 ~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~--~~~g~I~~~ef~~~~~~~~~~---~~~~~l~  439 (521)
                      +++++|..+|.+++| |+.+||..+|+.+|..++.+++..++..++.  +++|.|+|.+|...+......   ...+++.
T Consensus         1 e~ke~F~~~D~d~~G~I~~~el~~~l~~lg~~~t~~e~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~~~~~~l~   80 (139)
T d1w7jb1           1 EFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRGQGTYEDYL   80 (139)
T ss_dssp             CHHHHHHHHCCSSSSEEESTTHHHHHHHTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC--------CCH
T ss_pred             CHHHHHHHHhCCCCCeECHHHHHHHHHHhccCCCHHHHHHHHHHHhcccccCCceeeeccchhhHhhhhhccccHHHHHH
Confidence            368899999999999 9999999999999999999999999877663  678999999999988654322   2345688


Q ss_pred             HHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHH
Q 009980          440 LCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAM  504 (521)
Q Consensus       440 ~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~  504 (521)
                      .+|+.+|.|++|+|+.+||+.++..++..      .++++++.++.. |.|+||.|+|+||+++|
T Consensus        81 ~aF~~~D~d~~G~I~~~el~~~l~~~g~~------~~~~e~~~l~~~-~~d~dg~I~~~eF~~~l  138 (139)
T d1w7jb1          81 EGFRVFDKEGNGKVMGAELRHVLTTLGEK------MTEEEVETVLAG-HEDSNGCINYEAFLKHI  138 (139)
T ss_dssp             HHHHTTCTTSSSEEEHHHHHHHHHHSSSC------CCHHHHHHHHTT-CCCTTSEEEHHHHHHHT
T ss_pred             HhhhhccCCCCCeEeHHHHHHHHHHhCCC------CCHHHHHHHHhh-CCCCCCeEeHHHHHHHh
Confidence            99999999999999999999999998765      677889988864 88999999999999976

>d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Grancalcin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=1e-17  Score=143.54  Aligned_cols=125  Identities=18%  Similarity=0.325  Sum_probs=108.0

Q ss_pred             HHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCc-----chHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHH
Q 009980          367 LRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLV-----PLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRL  440 (521)
Q Consensus       367 l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~-----~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~  440 (521)
                      +..+|+.+ .+.+| |+..||+.+|+..|.+...     +.++.+++.+|.|++|.|+|+||+.++...      ..++.
T Consensus         2 ~~~~F~~~-a~~dG~I~~~EL~~~L~~~g~~~~~~~~s~~~~~~li~~~D~~~~G~i~~~EF~~l~~~~------~~~~~   74 (165)
T d1k94a_           2 VYTYFSAV-AGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAAL------NAWKE   74 (165)
T ss_dssp             HHHHHHHH-HGGGTSBCHHHHHHHHHHHTTTTTSCCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHH------HHHHH
T ss_pred             hHHHHHHh-cCCCCCCCHHHHHHHHHHcCCCCCcccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHhhcc------chhHH
Confidence            45678877 56688 9999999999998876543     467899999999999999999999987643      57899


Q ss_pred             HhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          441 CFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       441 ~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      +|+.||+|++|+|+.+||+.++..+|..      +++++++.+++.+|+  ||.|+|+||..+|..
T Consensus        75 ~F~~fD~d~sG~I~~~El~~~l~~~G~~------l~~~~~~~l~~~~d~--~g~i~~~eFi~~~~~  132 (165)
T d1k94a_          75 NFMTVDQDGSGTVEHHELRQAIGLMGYR------LSPQTLTTIVKRYSK--NGRIFFDDYVACCVK  132 (165)
T ss_dssp             HHHHHCTTCCSBCCHHHHHHHHHHTTCC------CCHHHHHHHHHHHCB--TTBCBHHHHHHHHHH
T ss_pred             HHHHhCCCCCCeEcHHHHHHHHHHhhhc------CCHHHHHHHHHHcCC--CCcCcHHHHHHHHHH
Confidence            9999999999999999999999998875      677899999999975  589999999998765

>d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), M-type [TaxId: 10116]

Probab=99.73  E-value=2.2e-18  Score=151.91  Aligned_cols=136  Identities=19%  Similarity=0.342  Sum_probs=113.5

Q ss_pred             CCCCHHHH-HHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCC--------CcchHHHHHHHHcCCCCcceeHHHHHHHH
Q 009980          357 HDLNEEEI-QNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSS--------LVPLAPRIFDLFDNNRDGTVDMREILCGF  426 (521)
Q Consensus       357 ~~~~~~~~-~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~--------~~~~~~~~f~~~D~~~~g~I~~~ef~~~~  426 (521)
                      ...+.+++ +.++.+|..+| |++| |+..||..+|..++...        +.+.+..+++.+|.|++|.|+|.||+..+
T Consensus         9 ~~~~~~~~~~~~r~~F~~~d-~~dG~Is~~EL~~~L~~~~~~~~~~~~~~~s~~~~~~l~~~~D~d~~G~I~~~EF~~~~   87 (186)
T d1df0a1           9 IEANEEDIGDGFRRLFAQLA-GEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYILW   87 (186)
T ss_dssp             C-CCCSCSCHHHHHHHHHHH-GGGTCEEHHHHHHHHHHHHHC----CCCCCCHHHHHHHHHHHCCSSSSEECHHHHHHHH
T ss_pred             ccCCHHHHHHHHHHHHHHHc-CCCCeEcHHHHHHHHHHhcccccccccccCCHHHHHHHHHHHcCCCCCcccHHHHHHHH
Confidence            34555555 45899999999 8889 99999999999875442        34578999999999999999999999887


Q ss_pred             hhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          427 SSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       427 ~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      ...      ..++.+|+.+|+|++|+|+.+||..++...+..      .++ ++..++..+|.|+||.|+|+||..+|..
T Consensus        88 ~~~------~~~~~~F~~~D~d~sG~I~~~El~~~l~~~g~~------~~~-~~~~~~~~~d~d~dg~I~f~eFi~~~~~  154 (186)
T d1df0a1          88 TKI------QKYQKIYREIDVDRSGTMNSYEMRKALEEAGFK------LPC-QLHQVIVARFADDELIIDFDNFVRCLVR  154 (186)
T ss_dssp             HHH------HHHHHHHHHHCTTCCSCEEGGGHHHHHHHTTEE------CCH-HHHHHHHHHHCCSTTEECHHHHHHHHHH
T ss_pred             HhH------HHHHHHHHhhCCCCCCcccHHHHHHHHHHHHhc------ccH-HHHHHHHHHHcCCCCeEeHHHHHHHHHH
Confidence            643      568899999999999999999999999988765      444 5567777899999999999999998864

>d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain small (regulatory) subunit (domain VI)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.71  E-value=2.1e-17  Score=143.77  Aligned_cols=131  Identities=18%  Similarity=0.348  Sum_probs=110.3

Q ss_pred             HHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCC--------CcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCC
Q 009980          362 EEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSS--------LVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKS  432 (521)
Q Consensus       362 ~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~--------~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~  432 (521)
                      +++++++++|+.+|.+ || |+..||..+|..++...        +.+.+..++..+|.|++|.|+|+||+.++...   
T Consensus         1 ee~~~~r~~F~~~d~~-dg~I~~~EL~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~d~d~~g~i~~~ef~~~~~~~---   76 (173)
T d1alva_           1 EEVRQFRRLFAQLAGD-DMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNI---   76 (173)
T ss_dssp             CHHHHHHHHHHHHHGG-GTSBCHHHHHHHHHHHHHTCSTTCCSCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH---
T ss_pred             ChHHHHHHHHHHHcCC-CCcCCHHHHHHHHHHhCCCcchhhhccCCHHHHHHHHHHhccCCCCcccchhhhhhhhhh---
Confidence            3678999999999955 78 99999999999886543        23578899999999999999999999887543   


Q ss_pred             CcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          433 QGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       433 ~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                         ..++.+|+.||.|++|.|+.+||..++...+..      .+++.+ ..|..+|.|++|.|+|+||+++|..
T Consensus        77 ---~~~~~~f~~~D~d~~G~I~~~el~~~L~~~g~~------~~~~~~-~~~~~~d~d~~G~i~~~EF~~~~~~  140 (173)
T d1alva_          77 ---KKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFH------LNEHLY-SMIIRRYSDEGGNMDFDNFISCLVR  140 (173)
T ss_dssp             ---HHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCC------CCHHHH-HHHHHHHTCSSSCBCHHHHHHHHHH
T ss_pred             ---hHHHHHHHHhccCCCCeecHHHHHHHHHHHHHh------hHHHHH-HHhhccccCCCCeEeHHHHHHHHHH
Confidence               458889999999999999999999999987765      455444 4555777799999999999999865

>d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Sandworm (Nereis diversicolor) [TaxId: 126592]

Probab=99.71  E-value=1.3e-16  Score=139.00  Aligned_cols=138  Identities=20%  Similarity=0.290  Sum_probs=108.7

Q ss_pred             HHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcC--CCCCcchH-------HHHHHH--HcCCCCcceeHHHHHHHHhh
Q 009980          361 EEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMN--MSSLVPLA-------PRIFDL--FDNNRDGTVDMREILCGFSS  428 (521)
Q Consensus       361 ~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~--~~~~~~~~-------~~~f~~--~D~~~~g~I~~~ef~~~~~~  428 (521)
                      +-.+++++.+|+.+|.|++| |+.+||..++..++  .....+..       ...+..  .+.+++|.|+++||+..+..
T Consensus         2 ~~~~~~l~~~F~~~D~d~dG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ef~~~~~~   81 (174)
T d2scpa_           2 DLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVAGGKGIDETTFINSMKE   81 (174)
T ss_dssp             HHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHSCCCTTHHHHHHHHHHHHHHHTGGGTTTTSCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHccCCCCcEeHHHHHHHHHHHhccccchhHHHHHhHHhhhhhccccccccCCCCcCcHHHHHHHHHh
Confidence            45678899999999999999 99999999987653  11111211       223332  27788999999999998876


Q ss_pred             ccCCC-----cHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHH
Q 009980          429 LRKSQ-----GDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAA  503 (521)
Q Consensus       429 ~~~~~-----~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~  503 (521)
                      .....     ....+..+|+.+|.|++|+||.+||..++..++        .+.+++..+|+.+|.|+||+|+++||+.+
T Consensus        82 ~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~--------~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~  153 (174)
T d2scpa_          82 MVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLG--------LDKTMAPASFDAIDTNNDGLLSLEEFVIA  153 (174)
T ss_dssp             HTSCGGGTHHHHTHHHHHHHHHCTTCSSSEEHHHHHHHHHHTT--------CCGGGHHHHHHHHCTTCSSEECHHHHHHH
T ss_pred             hhcchhhHHHHHHHHHHHHHHHCCCccccCCHHHHHHHHHHHh--------hhhHHHHHHHhhcCCCCCCcEeHHHHHHH
Confidence            43322     234578899999999999999999999998764        34568999999999999999999999998


Q ss_pred             Hhc
Q 009980          504 MQR  506 (521)
Q Consensus       504 ~~~  506 (521)
                      +..
T Consensus       154 ~~~  156 (174)
T d2scpa_         154 GSD  156 (174)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            764

>d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]

Probab=99.70  E-value=2e-18  Score=151.44  Aligned_cols=137  Identities=20%  Similarity=0.317  Sum_probs=96.8

Q ss_pred             cCCCCHHHHH-HHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCC--------CcchHHHHHHHHcCCCCcceeHHHHHHH
Q 009980          356 SHDLNEEEIQ-NLRIHFRTICANGDN-ATLSEFEEVLKAMNMSS--------LVPLAPRIFDLFDNNRDGTVDMREILCG  425 (521)
Q Consensus       356 ~~~~~~~~~~-~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~--------~~~~~~~~f~~~D~~~~g~I~~~ef~~~  425 (521)
                      ...++++++. .++++|+.+|. ++| |+..||+.+|...+...        +.+.++.++..+|.|++|.|+|+||..+
T Consensus        10 ~~~ls~~~~~~~~r~~F~~~d~-~dG~Is~~EL~~~L~~~~~~~~~~~~~~~s~e~~~~li~~~D~d~~G~i~~~EF~~l   88 (188)
T d1qxpa2          10 EKVLSEEEIDDNFKTLFSKLAG-DDMEISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLVEFNIL   88 (188)
T ss_dssp             -----------------CCCCC-SSSSCCCSCTTTTTCC---------CCCCCHHHHHHHHHHHCC--CCCCCSSSHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHcC-CCCEECHHHHHHHHHHhCccccccccccCCHHHHHHHHHHhcCCCCCcccHHHHHHH
Confidence            3446677764 58999999994 478 99999999987764432        3357899999999999999999999998


Q ss_pred             HhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHh
Q 009980          426 FSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQ  505 (521)
Q Consensus       426 ~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~  505 (521)
                      +..+      ..++.+|+.||+|++|+|+.+||+.++..+|..      .+++.++.++.. |.|++|.|+|+||..+|.
T Consensus        89 ~~~~------~~~~~~F~~~D~d~sG~i~~~El~~~l~~~g~~------~~~~~~~~l~~~-~~~~dg~i~f~eFi~~~~  155 (188)
T d1qxpa2          89 WNRI------RNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFK------LPCQLHQVIVAR-FADDELIIDFDNFVRCLV  155 (188)
T ss_dssp             HHHH------HHHHHHHGGGCTTCCSCCBHHHHHHHHHHTTEE------CCHHHHHHHHHH-TSCSSSBCCHHHHHHHHH
T ss_pred             Hhhh------HHHHHHHHHhCCCCCCEECHHHHHHHHHHhhhc------CCHHHHHHHHHH-hcCCCCcCCHHHHHHHHH
Confidence            7643      568899999999999999999999999988765      455555555555 679999999999999886


Q ss_pred             c
Q 009980          506 R  506 (521)
Q Consensus       506 ~  506 (521)
                      .
T Consensus       156 ~  156 (188)
T d1qxpa2         156 R  156 (188)
T ss_dssp             H
T ss_pred             H
Confidence            5

>d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=99.70  E-value=1.3e-17  Score=147.02  Aligned_cols=140  Identities=15%  Similarity=0.240  Sum_probs=113.1

Q ss_pred             CCHHHHHHHHHHHHh-hhcCCCC-CCHHHHHHHHHhcCC----CCCc-----------chHHHHHHHHcCCCCcceeHHH
Q 009980          359 LNEEEIQNLRIHFRT-ICANGDN-ATLSEFEEVLKAMNM----SSLV-----------PLAPRIFDLFDNNRDGTVDMRE  421 (521)
Q Consensus       359 ~~~~~~~~l~~~F~~-~D~~~~g-i~~~el~~~l~~~~~----~~~~-----------~~~~~~f~~~D~~~~g~I~~~e  421 (521)
                      +|+.+..+++.+|+. +|.|++| |+.+||..+++.++.    ....           .....++...|.+++|.|++++
T Consensus         2 lt~~q~~~i~~~F~~~~D~d~dG~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~i~~~~   81 (185)
T d2sasa_           2 LNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEE   81 (185)
T ss_dssp             CCHHHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHH
T ss_pred             cCHHHHHHHHHHHHHhhcCCCCCcCCHHHHHHHHHHhccccCCCcccHHHHHHHHHHHHHHHHHHHHhCcCCCCcEeeeH
Confidence            578889999999997 5999999 999999999987531    1111           1224567788999999999999


Q ss_pred             HHHHHhhcc---------CCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCC
Q 009980          422 ILCGFSSLR---------KSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANND  492 (521)
Q Consensus       422 f~~~~~~~~---------~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~d  492 (521)
                      |..++....         .......+..+|+.+|.|++|+||.+||+.++..++        +++++++.+|..+|.|+|
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~--------l~~~~~~~~f~~~D~d~d  153 (185)
T d2sasa_          82 YLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQ--------LQCADVPAVYNVITDGGK  153 (185)
T ss_dssp             HHHHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSC--------CCCSSHHHHHHHHHTTTT
T ss_pred             hhHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHccCCCccCCHHHHHHHHHHcC--------CCHHHHHHHHHHcCCCCC
Confidence            999876532         112245688999999999999999999999987654        345689999999999999


Q ss_pred             cceeHHHHHHHHhc
Q 009980          493 GKVTFDEFRAAMQR  506 (521)
Q Consensus       493 G~I~~~Ef~~~~~~  506 (521)
                      |.|+|+||.+++..
T Consensus       154 G~i~~~EF~~~~~~  167 (185)
T d2sasa_         154 VTFDLNRYKELYYR  167 (185)
T ss_dssp             SCCSHHHHHHHHHH
T ss_pred             CCCcHHHHHHHHHH
Confidence            99999999998764

>d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
species: Physarum polycephalum [TaxId: 5791]

Probab=99.70  E-value=3.1e-17  Score=157.87  Aligned_cols=144  Identities=20%  Similarity=0.323  Sum_probs=120.4

Q ss_pred             CCCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhcc-----
Q 009980          357 HDLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLR-----  430 (521)
Q Consensus       357 ~~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~-----  430 (521)
                      ..++.++...++.+|..+|.|++| |+.+||..+|+.+|...+..++..+|..+|.|++|.|+|.||...+....     
T Consensus       114 ~~l~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~  193 (321)
T d1ij5a_         114 PMLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAKYADTIPEGPLKKLFVMVENDTKGRMSYITLVAVANDLAALVAD  193 (321)
T ss_dssp             CCCCHHHHHHHHHHHTSSSSTTSSCCCHHHHHHHHHHHHTTSCSSHHHHHHHHHHHCCSSTHHHHHHTTSHHHHHTSCCC
T ss_pred             ccCCHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHcCCcccHHHHHHHHHHHhhcCCccccchhhhhhhhhhhhhhHH
Confidence            346788899999999999999999 99999999999999999999999999999999999999999975432110     


Q ss_pred             -------------------------CCCc-----------------------------HHHHHHHhHhhccCCCcceeHH
Q 009980          431 -------------------------KSQG-----------------------------DDALRLCFQMYDIDRSGCITKE  456 (521)
Q Consensus       431 -------------------------~~~~-----------------------------~~~l~~~f~~~D~d~~G~I~~~  456 (521)
                                               ....                             ...+..+|..+|.|++|+|+.+
T Consensus       194 F~~~d~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~F~~~D~d~~G~Is~~  273 (321)
T d1ij5a_         194 FRKIDTNSNGTLSRKEFREHFVRLGFDKKSVQDALFRYADEDESDDVGFSEYVHLGLCLLVLRILYAFADFDKSGQLSKE  273 (321)
T ss_dssp             HHHHCTTCCSEECHHHHHHHHHHTTCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHHHHHHHTCSSSCSSEEHH
T ss_pred             HHHHhhcccccchhHHHhhhhhcccccchHHHHHHHHhhhcccccccccccccchhhhhhHHHHHHHHHhcCCCCCCcHH
Confidence                                     0000                             0123457999999999999999


Q ss_pred             HHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHh
Q 009980          457 EVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQ  505 (521)
Q Consensus       457 e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~  505 (521)
                      ||..++...+..     ..+++++..+|+.+|.|+||+|+|+||+++|.
T Consensus       274 E~~~~l~~~~~~-----~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~ml  317 (321)
T d1ij5a_         274 EVQKVLEDAHIP-----ESARKKFEHQFSVVDVDDSKSLSYQEFVMLVL  317 (321)
T ss_dssp             HHHHHHHHTTCC-----GGGCSTHHHHHHHHTTTTCSEECHHHHHHHHH
T ss_pred             HHHHHHHHcCCC-----cCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            999999987642     14556899999999999999999999999875

>d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Sorcin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=6e-17  Score=140.65  Aligned_cols=130  Identities=20%  Similarity=0.334  Sum_probs=110.3

Q ss_pred             HHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCC-----cchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcH
Q 009980          362 EEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSL-----VPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGD  435 (521)
Q Consensus       362 ~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~-----~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~  435 (521)
                      ++...++..|..+| ++|| |+..||+.+|+.+|..++     .+.++.+++.+|.|++|.|+|.||+.++..      .
T Consensus         4 ~~~~~~~~~F~~~~-~~dG~Is~~EL~~~L~~~g~~~~~~~~~~~~v~~l~~~~D~d~~G~I~f~EF~~~~~~------~   76 (172)
T d1juoa_           4 QTQDPLYGYFAAVA-GQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAV------L   76 (172)
T ss_dssp             CCCCTTHHHHHHHH-TTTTEECHHHHHHHHHHHTTTCSSCCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHH------H
T ss_pred             chHHHHHHHHHHhC-CCCCCCCHHHHHHHHHHcCCCCCcccCCHHHHHHHHHHHCCCCCCceehHHHHHHHHh------h
Confidence            34456788999997 7789 999999999999987654     356789999999999999999999988764      2


Q ss_pred             HHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          436 DALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       436 ~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      ..+..+|+.+|.|++|.|+.+|+..++..++..      .+++++..+++.+|.  +|.|+|+||..+|..
T Consensus        77 ~~~~~~f~~~D~d~sG~i~~~El~~~l~~~g~~------ls~~~~~~l~~~~d~--~g~i~~~eF~~~~~~  139 (172)
T d1juoa_          77 NGWRQHFISFDTDRSGTVDPQELQKALTTMGFR------LSPQAVNSIAKRYST--NGKITFDDYIACCVK  139 (172)
T ss_dssp             HHHHHHHHTTCTTCCSEECHHHHHHHHHHTTCC------CCHHHHHHHHHHTCS--SSSEEHHHHHHHHHH
T ss_pred             hhhhHHHHHhCcCCCCcCCHHHHHHHHHHHHHh------hhHHHHHHHHHHHHh--cCCcCHHHHHHHHHH
Confidence            457889999999999999999999999988765      667789999998864  578999999888765

>d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]

Probab=99.68  E-value=1.7e-16  Score=140.22  Aligned_cols=141  Identities=18%  Similarity=0.203  Sum_probs=110.2

Q ss_pred             CHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHH-----HhcCCCCCcchHH-----HHHHHHcCCCCcceeHHHHHHHHhh
Q 009980          360 NEEEIQNLRIHFRTICANGDN-ATLSEFEEVL-----KAMNMSSLVPLAP-----RIFDLFDNNRDGTVDMREILCGFSS  428 (521)
Q Consensus       360 ~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l-----~~~~~~~~~~~~~-----~~f~~~D~~~~g~I~~~ef~~~~~~  428 (521)
                      +++.+++++.+|..+|.|++| |+.+||..++     +.++..++..+..     ..+...+.+.++.|+++||...+..
T Consensus         9 ~~~~i~r~k~~F~~~D~d~dG~I~~~E~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~e~~~~~~~   88 (189)
T d1qv0a_           9 NPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFLDGWKQ   88 (189)
T ss_dssp             CHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTHHHHTTCCHHHHHHHHHHHHHHHHHTTCCTTCCBCHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHhhhccccCCCceehHHHHHHHHH
Confidence            688999999999999999999 9999998754     3456555443332     2345557788999999999988755


Q ss_pred             ccC-----------CCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeH
Q 009980          429 LRK-----------SQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTF  497 (521)
Q Consensus       429 ~~~-----------~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~  497 (521)
                      ...           ....+.+..+|+.+|.|++|+|+.+||..++..++..      ++++++..+|+.+|.|+||.|+|
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~is~~E~~~~l~~~g~~------~~~~~~~~lf~~~D~d~dG~Is~  162 (189)
T d1qv0a_          89 LATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGIS------PSQEDCEATFRHCDLDNAGDLDV  162 (189)
T ss_dssp             HHHHHHHHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHHHHHHHSSC------CCHHHHHHHHHHSCCCTTSCEEH
T ss_pred             HHHHhhhccccccHHHHHHHHHHHHHHHccCCCCcccchhhHHHHHhcCCC------CCHHHHHHHHHHhCCCCCCcEeH
Confidence            311           1123457789999999999999999999999988765      67889999999999999999999


Q ss_pred             HHHHHHHhc
Q 009980          498 DEFRAAMQR  506 (521)
Q Consensus       498 ~Ef~~~~~~  506 (521)
                      +||++++..
T Consensus       163 ~EF~~~~~~  171 (189)
T d1qv0a_         163 DEMTRQHLG  171 (189)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999998864

>d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Leopard shark (Triakis semifasciata) [TaxId: 30493]

Probab=99.68  E-value=1e-16  Score=126.48  Aligned_cols=101  Identities=22%  Similarity=0.364  Sum_probs=82.9

Q ss_pred             cchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChh
Q 009980          399 VPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPG  478 (521)
Q Consensus       399 ~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~  478 (521)
                      .+++.++++.+|  .+|.|+|+||+.++..  ...++++++.+|+.||+|++|+|+.+||+.++..+....   ...+++
T Consensus         8 ~~di~~~~~~~~--~~G~idf~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g---~~~~~~   80 (109)
T d5pala_           8 ADDINKAISAFK--DPGTFDYKRFFHLVGL--KGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHG---RDLNDT   80 (109)
T ss_dssp             HHHHHHHHHHTC--STTCCCHHHHHHHHTC--TTCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTC---CCCCHH
T ss_pred             HHHHHHHHHhcC--CCCcCcHHHHHHHHHh--cCCCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHhhhcc---CcCCHH
Confidence            456777777776  4588999999987753  334678899999999999999999999999997653211   126778


Q ss_pred             HHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          479 KLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       479 ~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      +++.+|+.+|.|+||.|+|+||+++|++
T Consensus        81 e~~~~~~~~D~d~dG~I~~~EF~~~m~~  108 (109)
T d5pala_          81 ETKALLAAGDSDHDGKIGADEFAKMVAQ  108 (109)
T ss_dssp             HHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCCEeHHHHHHHHHh
Confidence            9999999999999999999999999874

>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

Probab=99.67  E-value=1.3e-16  Score=125.80  Aligned_cols=101  Identities=19%  Similarity=0.345  Sum_probs=82.6

Q ss_pred             cchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChh
Q 009980          399 VPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPG  478 (521)
Q Consensus       399 ~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~  478 (521)
                      .+++.+++..+|  ++|.|+|+||+.++...  ..+.+.++.+|+.||.|++|+|+.+||+.++..+....   ...+++
T Consensus         8 ~eeI~~~~~~~d--~dG~idf~EF~~~~~~~--~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g---~~ls~~   80 (109)
T d1pvaa_           8 ADDIKKALDAVK--AEGSFNHKKFFALVGLK--AMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADG---RDLTDA   80 (109)
T ss_dssp             HHHHHHHHHHTC--STTCCCHHHHHHHHTCT--TSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTC---CCCCHH
T ss_pred             HHHHHHHHHhcC--CCCCCcHHHHHHHHHHc--cCCHHHHHHHhhCccCCCcCeEcHHHHHHHHHHhhhcC---CCCCHH
Confidence            456666776654  56889999999887542  34567899999999999999999999999988764321   126778


Q ss_pred             HHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          479 KLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       479 ~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      +++.+|+.+|.|+||.|+|+||.++|.+
T Consensus        81 ev~~~~~~~D~d~dG~I~~~EF~~~m~~  108 (109)
T d1pvaa_          81 ETKAFLKAADKDGDGKIGIDEFETLVHE  108 (109)
T ss_dssp             HHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred             HHHHHHHHHCCCCcCcEeHHHHHHHHHh
Confidence            9999999999999999999999999864

>d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calerythrin
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.65  E-value=1.6e-15  Score=132.01  Aligned_cols=136  Identities=19%  Similarity=0.255  Sum_probs=111.3

Q ss_pred             HHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhc----CCCCCcchH-----------HHHHHHHcCCCCcceeHHHHHHHH
Q 009980          363 EIQNLRIHFRTICANGDN-ATLSEFEEVLKAM----NMSSLVPLA-----------PRIFDLFDNNRDGTVDMREILCGF  426 (521)
Q Consensus       363 ~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~----~~~~~~~~~-----------~~~f~~~D~~~~g~I~~~ef~~~~  426 (521)
                      ..++++++|+.+|.|++| |+.+||..++..+    +.....+.+           ..++...|.+++|.|++.++...+
T Consensus         5 ~~~~l~~~F~~~D~d~dG~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~   84 (176)
T d1nyaa_           5 ASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFIRVT   84 (176)
T ss_dssp             HHHHHHHHHHHCCSSCCSSBCSHHHHHHHHHHHHHTSSCSSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHcCCcccHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccHHHHHHHH
Confidence            345688999999999999 9999999998765    333333222           345667789999999999999887


Q ss_pred             hhccCCC--------cHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHH
Q 009980          427 SSLRKSQ--------GDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFD  498 (521)
Q Consensus       427 ~~~~~~~--------~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~  498 (521)
                      .......        ....++.+|..+|.|++|.|+.+||..++..++        +++++++.+|..+|.|+||+|+++
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~~~~~~--------~~~~~~~~~f~~~D~d~dG~i~~~  156 (176)
T d1nyaa_          85 ENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALG--------MSKAEAAEAFNQVDTNGNGELSLD  156 (176)
T ss_dssp             HHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTT--------CCHHHHHHHHHHHCTTCSSEEEHH
T ss_pred             hhhhhhhhhhhhHHHHHHHHHHHHHHHccCCChhhhHHHHHHHHHhcC--------CcHHHHHHHHHHHCCCCCCcEeHH
Confidence            6643322        134578899999999999999999999998764        467799999999999999999999


Q ss_pred             HHHHHHhc
Q 009980          499 EFRAAMQR  506 (521)
Q Consensus       499 Ef~~~~~~  506 (521)
                      ||..+++.
T Consensus       157 Ef~~~~~~  164 (176)
T d1nyaa_         157 ELLTAVRD  164 (176)
T ss_dssp             HHHHHHSC
T ss_pred             HHHHHHHH
Confidence            99999886

>d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]

Probab=99.65  E-value=3.6e-16  Score=137.78  Aligned_cols=141  Identities=17%  Similarity=0.157  Sum_probs=111.4

Q ss_pred             CHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHh-----cCCCCCcchHHH-----HHHHHcCCCCcceeHHHHHHHHhh
Q 009980          360 NEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKA-----MNMSSLVPLAPR-----IFDLFDNNRDGTVDMREILCGFSS  428 (521)
Q Consensus       360 ~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~-----~~~~~~~~~~~~-----~f~~~D~~~~g~I~~~ef~~~~~~  428 (521)
                      +|..+++++.+|+.+|.|++| |+.+||..++..     ++..++...+..     .+.......++.+++.+|+.++..
T Consensus         7 ~p~~~~~~k~~F~~~D~d~dG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (187)
T d1uhka1           7 NPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGWKK   86 (187)
T ss_dssp             CHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHHhccCccHHHHHHHHHHhhhhcccccccccccHHHHHHHHHH
Confidence            577789999999999999999 999999776654     455544433322     333445666778999999887654


Q ss_pred             ccC-----------CCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeH
Q 009980          429 LRK-----------SQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTF  497 (521)
Q Consensus       429 ~~~-----------~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~  497 (521)
                      ...           ......+..+|+.+|.|++|+|+.+||+.++..++..      .+++++..+|+.+|.|+||+|+|
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~------~~~~~~~~lf~~~D~d~dG~Is~  160 (187)
T d1uhka1          87 LATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGII------QSSEDCEETFRVCDIDESGQLDV  160 (187)
T ss_dssp             HHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTSC------CSHHHHHHHHHHSCCCTTSCEEH
T ss_pred             HHHHHHHhhhhhhHHHHHHHHHHHHHHHccCCCcccchHHHHHHHHHhCCC------ccHHHHHHHHHHhCCCCCCCEeH
Confidence            321           1123457889999999999999999999999988764      67889999999999999999999


Q ss_pred             HHHHHHHhc
Q 009980          498 DEFRAAMQR  506 (521)
Q Consensus       498 ~Ef~~~~~~  506 (521)
                      +||.+++..
T Consensus       161 ~EF~~~~~~  169 (187)
T d1uhka1         161 DEMTRQHLG  169 (187)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999997753

>d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Grancalcin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=9.2e-15  Score=124.83  Aligned_cols=121  Identities=18%  Similarity=0.258  Sum_probs=105.7

Q ss_pred             HHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhH
Q 009980          365 QNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQ  443 (521)
Q Consensus       365 ~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~  443 (521)
                      +.++.++..+|.|++| |+.+||..++..+      ..+..+|+.+|.|++|.|+.+||..++...+...+.+++..+++
T Consensus        40 ~~~~~li~~~D~~~~G~i~~~EF~~l~~~~------~~~~~~F~~fD~d~sG~I~~~El~~~l~~~G~~l~~~~~~~l~~  113 (165)
T d1k94a_          40 ETCRIMIAMLDRDHTGKMGFNAFKELWAAL------NAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVK  113 (165)
T ss_dssp             HHHHHHHHHHCTTCSSCBCHHHHHHHHHHH------HHHHHHHHHHCTTCCSBCCHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHhhcc------chhHHHHHHhCCCCCCeEcHHHHHHHHHHhhhcCCHHHHHHHHH
Confidence            3456667888999999 9999999988764      57889999999999999999999999999999999999999999


Q ss_pred             hhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcce--eHHHHHHHHh
Q 009980          444 MYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKV--TFDEFRAAMQ  505 (521)
Q Consensus       444 ~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I--~~~Ef~~~~~  505 (521)
                      .+|.  +|.|+++||..++..+            +.+..+|+.+|+|++|+|  +++||.+++.
T Consensus       114 ~~d~--~g~i~~~eFi~~~~~l------------~~~~~~F~~~D~d~~G~i~l~~~ef~~~~~  163 (165)
T d1k94a_         114 RYSK--NGRIFFDDYVACCVKL------------RALTDFFRKRDHLQQGSANFIYDDFLQGTM  163 (165)
T ss_dssp             HHCB--TTBCBHHHHHHHHHHH------------HHHHHHHHTTCTTCCSEEEEEHHHHHHHHH
T ss_pred             HcCC--CCcCcHHHHHHHHHHH------------HHHHHHHHHhCCCCCCcEEecHHHHHHHHH
Confidence            9986  5899999999988653            256789999999999987  7899998754

>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

Probab=99.58  E-value=4e-15  Score=116.88  Aligned_cols=101  Identities=18%  Similarity=0.267  Sum_probs=83.2

Q ss_pred             CcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCCh
Q 009980          398 LVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEP  477 (521)
Q Consensus       398 ~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~  477 (521)
                      +.+++..+++..+.  +|.|+|.||+.++...  ....++++.+|+.||.|++|+|+.+||..++..++..   ....++
T Consensus         6 s~~di~~~~~~~~~--~gsi~~~eF~~~~~l~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l~~~---~~~~~~   78 (107)
T d2pvba_           6 KDADVAAALAACSA--ADSFKHKEFFAKVGLA--SKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPS---ARALTD   78 (107)
T ss_dssp             CHHHHHHHHHHTCS--TTCCCHHHHHHHHTGG--GSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTT---SCCCCH
T ss_pred             CHHHHHHHHHhccC--CCCcCHHHHHHHHhcc--cCCHHHHHHHHHhhccCCCCcCcHHHHHHHHHHhhcc---cccCCH
Confidence            34567777777765  4679999999887632  3456789999999999999999999999999887532   123677


Q ss_pred             hHHHHHHHHhcCCCCcceeHHHHHHHHh
Q 009980          478 GKLDEIFDLMDANNDGKVTFDEFRAAMQ  505 (521)
Q Consensus       478 ~~~~~~f~~~D~~~dG~I~~~Ef~~~~~  505 (521)
                      ++++.+|+.+|.|+||.|+|+||+.+|+
T Consensus        79 ~~~~~l~~~~D~d~dG~I~~~EF~~~m~  106 (107)
T d2pvba_          79 AETKAFLADGDKDGDGMIGVDEFAAMIK  106 (107)
T ss_dssp             HHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence            8999999999999999999999999986

>d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Apoptosis-linked protein alg-2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.58  E-value=1.1e-14  Score=127.05  Aligned_cols=123  Identities=19%  Similarity=0.325  Sum_probs=108.6

Q ss_pred             HHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHh
Q 009980          364 IQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCF  442 (521)
Q Consensus       364 ~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f  442 (521)
                      ...+..+|..+|.+++| |+.+||..+++..      ..+..+|+.+|.+++|.|+.+||..++...+...+++.+..++
T Consensus        55 ~~~~~~l~~~~D~d~~g~i~~~EFl~~~~~~------~~~~~~f~~~D~~~~G~i~~~el~~~l~~~~~~l~~e~~~~~~  128 (181)
T d1hqva_          55 PVTVRSIISMFDRENKAGVNFSEFTGVWKYI------TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILI  128 (181)
T ss_dssp             HHHHHHHHHHHCCSSSSSBCHHHHHHHHHHH------HHHHHHHHHHCTTCCSSBCHHHHHHHHHHHTBCCCHHHHHHHH
T ss_pred             HHHHHHHhhccccccccchhhhHHHhhhhhc------cccccccccccccccchhhhHHHHHHHHHcCCcchhHHHHHHH
Confidence            34567778899999999 9999999988764      4678899999999999999999999999988888999999999


Q ss_pred             HhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcce--eHHHHHHHH
Q 009980          443 QMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKV--TFDEFRAAM  504 (521)
Q Consensus       443 ~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I--~~~Ef~~~~  504 (521)
                      +.+|.+++|.|+++||..++..+            +.+..+|+.+|+++||.|  +++||..+|
T Consensus       129 ~~~d~~~dg~Is~~eF~~~~~~l------------~~l~~~F~~~D~~~dG~i~~~~~ef~~~~  180 (181)
T d1hqva_         129 RKFDRQGRGQIAFDDFIQGCIVL------------QRLTDIFRRYDTDQDGWIQVSYEQYLSMV  180 (181)
T ss_dssp             HHHCSSCSSCBCHHHHHHHHHHH------------HHHHHHHHHHCTTCSSCCCCCHHHHHHHH
T ss_pred             HHhCCCCCCcCcHHHHHHHHHHH------------HHHHHHHHHhCCCCCCCEEecHHHHHHHh
Confidence            99999999999999999887642            257889999999999966  799999876

>d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=99.57  E-value=7.1e-15  Score=116.12  Aligned_cols=101  Identities=19%  Similarity=0.355  Sum_probs=82.9

Q ss_pred             cchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChh
Q 009980          399 VPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPG  478 (521)
Q Consensus       399 ~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~  478 (521)
                      .+++.+++..++.  +|.|+|+||+.++...  ..+++.++.+|+.||+|++|+|+.+||..++..++...   ...+++
T Consensus         8 ~~~i~~~~~~~~~--~~~i~f~eF~~~~~~~--~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~---~~~~~~   80 (109)
T d1rwya_           8 AEDIKKAIGAFTA--ADSFDHKKFFQMVGLK--KKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDA---RDLSAK   80 (109)
T ss_dssp             HHHHHHHHHTTCS--TTCCCHHHHHHHHTGG--GSCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTC---CCCCHH
T ss_pred             HHHHHHHHHhccc--CCCcCHHHHHHHHccc--cCCHHHHHHHhhcccCCCCCcCcHHHHHHHHHHhcccc---ccCCHH
Confidence            4566777776644  5789999999887532  24577899999999999999999999999998764321   125678


Q ss_pred             HHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          479 KLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       479 ~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      +++.+|+.+|.|+||+|+|+||+++|++
T Consensus        81 e~~~~~~~~D~d~dG~i~~~EF~~~m~~  108 (109)
T d1rwya_          81 ETKTLMAAGDKDGDGKIGVEEFSTLVAE  108 (109)
T ss_dssp             HHHHHHHHHCTTCSSSEEHHHHHHHHHT
T ss_pred             HHHHHHHHhCCCCCCeEeHHHHHHHHHh
Confidence            9999999999999999999999999874

>d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.55  E-value=8.4e-15  Score=123.06  Aligned_cols=119  Identities=17%  Similarity=0.173  Sum_probs=102.0

Q ss_pred             cchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccC--CCcceeHHHHHHHHHhCCCCCCCCCCCC
Q 009980          399 VPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDID--RSGCITKEEVASMLRALPDDCLPVDITE  476 (521)
Q Consensus       399 ~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d--~~G~I~~~e~~~~l~~~~~~~~~~~~~~  476 (521)
                      .++++++|..+|.|++|.|+.+||..+++.++..++..++..++..++.+  ++|.|+++||..++........   ...
T Consensus         3 ~eelke~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~e~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~---~~~   79 (145)
T d2mysc_           3 ADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITFEEFLPMLQAAANNKD---QGT   79 (145)
T ss_pred             HHHHHHHHHHHcCCCCCeECHHHHHHHHHHhhhcchhhhhHHHHHHHhhcccccCccchhHHHHHHhhhhhccc---cch
Confidence            36788999999999999999999999999999888889999999888665  6899999999998875432211   123


Q ss_pred             hhHHHHHHHHhcCCCCcceeHHHHHHHHhc-CccHHHHHHHhhhh
Q 009980          477 PGKLDEIFDLMDANNDGKVTFDEFRAAMQR-DSSLQDVVLSSLRQ  520 (521)
Q Consensus       477 ~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~-~~~~~~~~~~~~~~  520 (521)
                      .+++..+|+.+|.|++|+|+.+||+++|.. +..+++++++.|++
T Consensus        80 ~~~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~  124 (145)
T d2mysc_          80 FEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMK  124 (145)
T ss_pred             HHHHHHHHHHhhcCCCCEEcHHHHHHHHHHhCCCCCHHHHHHHHh
Confidence            457899999999999999999999999998 88999999999875

>d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), M-type [TaxId: 10116]

Probab=99.54  E-value=2.2e-14  Score=125.77  Aligned_cols=120  Identities=18%  Similarity=0.198  Sum_probs=103.9

Q ss_pred             HHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHh
Q 009980          366 NLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQM  444 (521)
Q Consensus       366 ~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~  444 (521)
                      .+..++..+|.|++| |+..||..+...+      ..+..+|+.+|+|++|.|+.+|+..++...+...+.+ +..++..
T Consensus        62 ~~~~l~~~~D~d~~G~I~~~EF~~~~~~~------~~~~~~F~~~D~d~sG~I~~~El~~~l~~~g~~~~~~-~~~~~~~  134 (186)
T d1df0a1          62 TCKIMVDMLDEDGSGKLGLKEFYILWTKI------QKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPCQ-LHQVIVA  134 (186)
T ss_dssp             HHHHHHHHHCCSSSSEECHHHHHHHHHHH------HHHHHHHHHHCTTCCSCEEGGGHHHHHHHTTEECCHH-HHHHHHH
T ss_pred             HHHHHHHHHcCCCCCcccHHHHHHHHHhH------HHHHHHHHhhCCCCCCcccHHHHHHHHHHHHhcccHH-HHHHHHH
Confidence            456678999999999 9999999887764      5678999999999999999999999999888777755 4567778


Q ss_pred             hccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcce--eHHHHHHHH
Q 009980          445 YDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKV--TFDEFRAAM  504 (521)
Q Consensus       445 ~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I--~~~Ef~~~~  504 (521)
                      +|.|++|.|+++||..++..+            +.+..+|+.+|+|++|+|  +++||..+.
T Consensus       135 ~d~d~dg~I~f~eFi~~~~~l------------~~~~~~F~~~D~~~~G~i~l~~~ef~~~~  184 (186)
T d1df0a1         135 RFADDELIIDFDNFVRCLVRL------------EILFKIFKQLDPENTGTIQLDLISWLSFS  184 (186)
T ss_dssp             HHCCSTTEECHHHHHHHHHHH------------HHHHHHHHHHCTTCCSEEEEEHHHHHHHH
T ss_pred             HHcCCCCeEeHHHHHHHHHHH------------HHHHHHHHHhCCCCCCcEEecHHHHHHHh
Confidence            999999999999999988653            378899999999999987  799998864

>d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Sorcin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=3.8e-14  Score=122.61  Aligned_cols=121  Identities=21%  Similarity=0.315  Sum_probs=105.3

Q ss_pred             HHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhH
Q 009980          365 QNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQ  443 (521)
Q Consensus       365 ~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~  443 (521)
                      +.++.++..+|.|++| |+..||..++...      .....+|+.+|.+++|.|+.+|+..++..++...+.+.++.+|+
T Consensus        47 ~~v~~l~~~~D~d~~G~I~f~EF~~~~~~~------~~~~~~f~~~D~d~sG~i~~~El~~~l~~~g~~ls~~~~~~l~~  120 (172)
T d1juoa_          47 ETCRLMVSMLDRDMSGTMGFNEFKELWAVL------NGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAK  120 (172)
T ss_dssp             HHHHHHHHHHCTTCSSCEEHHHHHHHHHHH------HHHHHHHHTTCTTCCSEECHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCceehHHHHHHHHhh------hhhhHHHHHhCcCCCCcCCHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence            3456668899999999 9999999887753      45678999999999999999999999999988889999999999


Q ss_pred             hhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcce--eHHHHHHHHh
Q 009980          444 MYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKV--TFDEFRAAMQ  505 (521)
Q Consensus       444 ~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I--~~~Ef~~~~~  505 (521)
                      .+|.  +|.|+++||..++..+            +.+..+|+.+|+|+||.|  +|+||..++.
T Consensus       121 ~~d~--~g~i~~~eF~~~~~~~------------~~~~~~f~~~D~d~~G~Itl~~~eFl~~~l  170 (172)
T d1juoa_         121 RYST--NGKITFDDYIACCVKL------------RALTDSFRRRDTAQQGVVNFPYDDFIQCVM  170 (172)
T ss_dssp             HTCS--SSSEEHHHHHHHHHHH------------HHHHHHHHHTCTTCCSEEEEEHHHHHHHHT
T ss_pred             HHHh--cCCcCHHHHHHHHHHH------------HHHHHHHHHhCCCCCCcEEecHHHHHHHHH
Confidence            9975  5889999999988753            267889999999999997  8899998764

>d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=99.52  E-value=2.6e-14  Score=119.41  Aligned_cols=111  Identities=14%  Similarity=0.235  Sum_probs=97.6

Q ss_pred             hHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHH
Q 009980          401 LAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKL  480 (521)
Q Consensus       401 ~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~  480 (521)
                      +++++|..+|.|++|.|+.+||..+++.++..+++.++..+++    +++|.|+++||..++......     ..+++.+
T Consensus         8 e~~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~el~~~~~----~~~~~i~~~eF~~~~~~~~~~-----~~~~~~l   78 (142)
T d1wdcb_           8 EMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPLNFTMFLSIFSDKLSG-----TDSEETI   78 (142)
T ss_dssp             HHHHHHHHHCTTCSSSCCHHHHHHHHHHHSSCCCHHHHHHHHT----TSSSCCCHHHHHHHHHHHTCS-----CCCHHHH
T ss_pred             HHHHHHHHHcCCCCCcCChHHHHHHHHHhhcCCCHHHHHHHHH----hccCccccccccccccccccc-----cchhhhH
Confidence            5678999999999999999999999999999999988888774    678999999999988753322     1346789


Q ss_pred             HHHHHHhcCCCCcceeHHHHHHHHhc-CccHHHHHHHhhhh
Q 009980          481 DEIFDLMDANNDGKVTFDEFRAAMQR-DSSLQDVVLSSLRQ  520 (521)
Q Consensus       481 ~~~f~~~D~~~dG~I~~~Ef~~~~~~-~~~~~~~~~~~~~~  520 (521)
                      ..+|+.+|.|++|+|+.+||+.++.. +..+|+++++.|++
T Consensus        79 ~~aF~~~D~d~~G~I~~~el~~~l~~~g~~lt~~e~~~l~~  119 (142)
T d1wdcb_          79 RNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFK  119 (142)
T ss_dssp             HHHHHTTCTTCCSCEEHHHHHHHHHHSSSCCCHHHHHHHHH
T ss_pred             HHhhhhhcccCCCcccHHHHHHHHHHccccCCHHHHHHHHH
Confidence            99999999999999999999999998 88999999999875

>d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Oncomodulin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.51  E-value=3.3e-14  Score=111.80  Aligned_cols=101  Identities=17%  Similarity=0.270  Sum_probs=81.3

Q ss_pred             CcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCCh
Q 009980          398 LVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEP  477 (521)
Q Consensus       398 ~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~  477 (521)
                      +.+++..+++..+  .+|.++|++|...+..  .....++++.+|+.||.|++|+|+.+||+.++..++...   ...++
T Consensus         7 s~~dI~~~l~~~~--~~~s~~~~~F~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~---~~l~~   79 (108)
T d1rroa_           7 SAEDIAAALQECQ--DPDTFEPQKFFQTSGL--SKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDA---RELTE   79 (108)
T ss_dssp             CHHHHHHHHHHTC--STTCCCHHHHHHHHSG--GGSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTS---CCCCH
T ss_pred             CHHHHHHHHHhcc--cCCCccHHHHHHHHcc--CcCCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHHHhcc---CCCCH
Confidence            4456666665554  5577999999876543  234567899999999999999999999999998865321   12677


Q ss_pred             hHHHHHHHHhcCCCCcceeHHHHHHHHh
Q 009980          478 GKLDEIFDLMDANNDGKVTFDEFRAAMQ  505 (521)
Q Consensus       478 ~~~~~~f~~~D~~~dG~I~~~Ef~~~~~  505 (521)
                      ++++.+|+.+|.|+||.|+|+||..+|+
T Consensus        80 ~~~~~~~~~~D~d~dG~I~~~EF~~~m~  107 (108)
T d1rroa_          80 SETKSLMDAADNDGDGKIGADEFQEMVH  107 (108)
T ss_dssp             HHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred             HHHHHHHHHhCCCCCCeEeHHHHHHHHc
Confidence            8999999999999999999999999986

>d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: EHCABP
species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]

Probab=99.51  E-value=4.6e-14  Score=116.70  Aligned_cols=102  Identities=28%  Similarity=0.431  Sum_probs=89.1

Q ss_pred             HHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHH
Q 009980          402 APRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLD  481 (521)
Q Consensus       402 ~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~  481 (521)
                      ++++|+.+|.|+||.|+++||..++..++...+++.+..+|+.+|.+++|.|+.+||..++........   ......+.
T Consensus         2 ae~~F~~~D~d~dG~is~~E~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~Ef~~~~~~~~~~~~---~~~~~~~~   78 (134)
T d1jfja_           2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDL---SDDKIGLK   78 (134)
T ss_dssp             HHHHHHHHCTTCSSEEEHHHHHHHHHTTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSS---HHHHHHHH
T ss_pred             HHHHHHHHcCCCcCCCcHHHHHHHHHHcCCCCCHHHHHHHHHHhhhccccccccccccccccccccccc---cccccccc
Confidence            578999999999999999999999999998899999999999999999999999999998876443211   01234578


Q ss_pred             HHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          482 EIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       482 ~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      .+|+.+|.|++|.|+.+||..++..
T Consensus        79 ~~F~~~D~~~~g~i~~~el~~~~~~  103 (134)
T d1jfja_          79 VLYKLMDVDGDGKLTKEEVTSFFKK  103 (134)
T ss_dssp             HHHHHHCCSSSSEEEHHHHHHHHTT
T ss_pred             ccccccccccCCcccHHHHHHHHHh
Confidence            8999999999999999999999987

>d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain small (regulatory) subunit (domain VI)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.50  E-value=7.5e-14  Score=120.84  Aligned_cols=121  Identities=17%  Similarity=0.246  Sum_probs=102.7

Q ss_pred             HHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhH
Q 009980          365 QNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQ  443 (521)
Q Consensus       365 ~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~  443 (521)
                      ...+.++..+|.|++| |+..||..++...      .....+|+.+|.|++|.|+..||..++...+...+++.+. +|.
T Consensus        47 ~~~~~l~~~~d~d~~g~i~~~ef~~~~~~~------~~~~~~f~~~D~d~~G~I~~~el~~~L~~~g~~~~~~~~~-~~~  119 (173)
T d1alva_          47 DTCRSMVAVMDSDTTGKLGFEEFKYLWNNI------KKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYS-MII  119 (173)
T ss_dssp             HHHHHHHHHHCTTCSSSBCHHHHHHHHHHH------HHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCCCCHHHHH-HHH
T ss_pred             HHHHHHHHHhccCCCCcccchhhhhhhhhh------hHHHHHHHHhccCCCCeecHHHHHHHHHHHHHhhHHHHHH-Hhh
Confidence            3456778999999999 9999998887654      4678899999999999999999999999988877776655 455


Q ss_pred             hhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcce--eHHHHHHHH
Q 009980          444 MYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKV--TFDEFRAAM  504 (521)
Q Consensus       444 ~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I--~~~Ef~~~~  504 (521)
                      .+|.|++|.|+++||..++..+            +.+..+|+.+|+|++|.|  +++||..+.
T Consensus       120 ~~d~d~~G~i~~~EF~~~~~~~------------~~~~~~f~~~D~d~~G~it~~~~efl~~~  170 (173)
T d1alva_         120 RRYSDEGGNMDFDNFISCLVRL------------DAMFRAFKSLDKDGTGQIQVNIQEWLQLT  170 (173)
T ss_dssp             HHHTCSSSCBCHHHHHHHHHHH------------HHHHHHHHHHSSSCCSEEEEEHHHHHHHH
T ss_pred             ccccCCCCeEeHHHHHHHHHHH------------HHHHHHHHHhCCCCCCcEEecHHHHHHHH
Confidence            6777999999999999988653            367889999999999988  689998864

>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]

Probab=99.49  E-value=2.2e-14  Score=120.63  Aligned_cols=115  Identities=23%  Similarity=0.343  Sum_probs=100.9

Q ss_pred             hHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHH
Q 009980          401 LAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKL  480 (521)
Q Consensus       401 ~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~  480 (521)
                      +++++|..+|.|++|.|+++||..++...+...++..+..+|+.+|.+++|.|+++||..++......     ....+.+
T Consensus        10 ~l~~~F~~~D~~~~G~Is~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~-----~~~~~~~   84 (146)
T d1exra_          10 EFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKE-----QDSEEEL   84 (146)
T ss_dssp             HHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHH-----HHHHHHH
T ss_pred             HHHHHHHHHcCCCCCeECHHHHHHHHHhcCCCCCHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHhhc-----cChHHHH
Confidence            46788999999999999999999999998888899999999999999999999999999987643211     0124578


Q ss_pred             HHHHHHhcCCCCcceeHHHHHHHHhc-CccHHHHHHHhhhh
Q 009980          481 DEIFDLMDANNDGKVTFDEFRAAMQR-DSSLQDVVLSSLRQ  520 (521)
Q Consensus       481 ~~~f~~~D~~~dG~I~~~Ef~~~~~~-~~~~~~~~~~~~~~  520 (521)
                      ..+|+.+|.|++|.|+.+||..++.. +..+++++++.+++
T Consensus        85 ~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~i~~  125 (146)
T d1exra_          85 IEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIR  125 (146)
T ss_dssp             HHHHHHHSTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred             HHHHHHhCCCCCCcCCHHHHHHHHHHHhhcCCHHHHHHHHH
Confidence            89999999999999999999999988 88899999998875

>d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]

Probab=99.49  E-value=4.5e-14  Score=123.23  Aligned_cols=120  Identities=18%  Similarity=0.215  Sum_probs=100.9

Q ss_pred             HHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHh
Q 009980          366 NLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQM  444 (521)
Q Consensus       366 ~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~  444 (521)
                      .++.++..+|.|++| |+..||..++..+      ..++.+|+.+|+|++|.|+..||..++..++...+++.+..++..
T Consensus        64 ~~~~li~~~D~d~~G~i~~~EF~~l~~~~------~~~~~~F~~~D~d~sG~i~~~El~~~l~~~g~~~~~~~~~~l~~~  137 (188)
T d1qxpa2          64 SCRSMVNLMDRDGNGKLGLVEFNILWNRI------RNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVAR  137 (188)
T ss_dssp             HHHHHHHHHCC--CCCCCSSSHHHHHHHH------HHHHHHHGGGCTTCCSCCBHHHHHHHHHHTTEECCHHHHHHHHHH
T ss_pred             HHHHHHHHhcCCCCCcccHHHHHHHHhhh------HHHHHHHHHhCCCCCCEECHHHHHHHHHHhhhcCCHHHHHHHHHH
Confidence            457778999999999 9999999888764      467889999999999999999999999998887887777777776


Q ss_pred             hccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcce--eHHHHHHHH
Q 009980          445 YDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKV--TFDEFRAAM  504 (521)
Q Consensus       445 ~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I--~~~Ef~~~~  504 (521)
                      + .|++|.|+++||..++..+            +.+..+|+.+|++++|.|  +++||..+.
T Consensus       138 ~-~~~dg~i~f~eFi~~~~~l------------~~~~~~F~~~D~~~~G~i~l~~~efl~~~  186 (188)
T d1qxpa2         138 F-ADDELIIDFDNFVRCLVRL------------EILFKIFKQLDPENTGTIQLDLISWLSFS  186 (188)
T ss_dssp             T-SCSSSBCCHHHHHHHHHHH------------HHHHHHHHHSCSSCCSCEEEEHHHHHHHT
T ss_pred             h-cCCCCcCCHHHHHHHHHHH------------HHHHHHHHHhCCCCCCeEEeeHHHHHHHH
Confidence            4 5999999999999988653            256789999999999976  899997753

>d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Cdc4p
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.49  E-value=5.1e-14  Score=117.25  Aligned_cols=114  Identities=14%  Similarity=0.171  Sum_probs=97.4

Q ss_pred             chHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhH
Q 009980          400 PLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGK  479 (521)
Q Consensus       400 ~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~  479 (521)
                      ...+++|..+|.|++|.|+++||..+++.++..++.+++..    ++.+++|.|+++||..++.......   .....++
T Consensus         5 ~~fke~F~~~D~d~dG~I~~~el~~~l~~lg~~~t~~ei~~----~~~~~~~~i~~~eF~~~~~~~~~~~---~~~~~~~   77 (140)
T d1ggwa_           5 SPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITE----IESTLPAEVDMEQFLQVLNRPNGFD---MPGDPEE   77 (140)
T ss_dssp             TTTHHHHHHTCSSSSSEECHHHHHHHHHHTSCCCCHHHHHH----HHTTSCSSEEHHHHHHHHCTTSSSS---SSCCHHH
T ss_pred             HHHHHHHHHHCCCCCCeECHHHHHHHHHHHHhhhHHHhhhh----hhccccccccchhhhhhhhhhhhcc---hhhHHHH
Confidence            46689999999999999999999999999998888887654    5778999999999999987533221   1134567


Q ss_pred             HHHHHHHhcCCCCcceeHHHHHHHHhc-CccHHHHHHHhhhh
Q 009980          480 LDEIFDLMDANNDGKVTFDEFRAAMQR-DSSLQDVVLSSLRQ  520 (521)
Q Consensus       480 ~~~~f~~~D~~~dG~I~~~Ef~~~~~~-~~~~~~~~~~~~~~  520 (521)
                      +..+|+.+|.|++|+|+.+||+++|.. +.++|+++++.|++
T Consensus        78 l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~lt~~e~~~l~~  119 (140)
T d1ggwa_          78 FVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLK  119 (140)
T ss_dssp             HHHHHHTTCSSCSSCCCHHHHHHHHHHHHSCSCHHHHHHHHH
T ss_pred             HHHHHHHHhccCCCcchHHHHHHHHHHcCCCCCHHHHHHHHH
Confidence            999999999999999999999999998 78899999999885

>d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Programmed cell death 6 protein-like protein
species: Leishmania major [TaxId: 5664]

Probab=99.49  E-value=1.7e-13  Score=119.44  Aligned_cols=125  Identities=18%  Similarity=0.291  Sum_probs=108.2

Q ss_pred             CCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHH
Q 009980          358 DLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDD  436 (521)
Q Consensus       358 ~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~  436 (521)
                      .+++.++   ..+|..+|.|++| |+..+|...+...      ..+.++|+.+|.+++|.|+.+||..++..++...+++
T Consensus        50 ~~s~~~~---~~l~~~~d~d~~~~i~~~ef~~~~~~~------~~~~~~F~~~D~~~~g~I~~~el~~~l~~~g~~ls~~  120 (182)
T d1y1xa_          50 PFSLATT---EKLLHMYDKNHSGEITFDEFKDLHHFI------LSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQ  120 (182)
T ss_dssp             CCCHHHH---HHHHHHHCTTCSSSBCHHHHHHHHHHH------HHHHHHHHHHCTTSSSCBCHHHHHHHHHTTSCCCCHH
T ss_pred             cCchhhh---hhhhccccccccccccccccccccccc------cccccchhccccccchhhhhHHHHHHHHHhCCchhHH
Confidence            3555554   5558888999999 9999998887653      4678899999999999999999999999998888999


Q ss_pred             HHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcce--eHHHHHHH
Q 009980          437 ALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKV--TFDEFRAA  503 (521)
Q Consensus       437 ~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I--~~~Ef~~~  503 (521)
                      ++..+|+.+|.|++|.|+++||..++..+            ..+..+|+.+|.+++|.|  +|+||...
T Consensus       121 e~~~i~~~~d~~~dg~I~~~eF~~~~~~l------------~~~~~~F~~~D~~~~G~is~~~~~f~~~  177 (182)
T d1y1xa_         121 TFQALMRKFDRQRRGSLGFDDYVELSIFV------------CRVRNVFAFYDRERTGQVTFTFDTFIGG  177 (182)
T ss_dssp             HHHHHHHHHCTTCSSSBCHHHHHHHHHHH------------HHHHHHHHHHCTTCCSEEEEEHHHHHHH
T ss_pred             HHHHHHhhcccCCCCCcCHHHHHHHHHHH------------HHHHHHHHHhCCCCCCcEEeeHHHHHHH
Confidence            99999999999999999999999988653            257889999999999995  68999874

>d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.46  E-value=2.1e-13  Score=114.43  Aligned_cols=115  Identities=20%  Similarity=0.311  Sum_probs=103.0

Q ss_pred             hHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHH
Q 009980          401 LAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKL  480 (521)
Q Consensus       401 ~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~  480 (521)
                      +++++|+.+|.|++|.|+++||..++...+..+++..+..++..++.++.+.++++++...+......     ..+.+.+
T Consensus        11 ~l~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~   85 (146)
T d1lkja_          11 EFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKS-----NDSEQEL   85 (146)
T ss_dssp             HHHHHHHHHCCSSSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCSSSCCEEEHHHHHHHHHHHTCC-----CCHHHHH
T ss_pred             HHHHHHHHHCCCCCCcEeHHHHHHHHHhcCCCCCHHHHHHHHHHhccCCcccccHHHHHHHHHHhhcc-----ccHHHHH
Confidence            45678999999999999999999999999988999999999999999999999999999988764432     1345679


Q ss_pred             HHHHHHhcCCCCcceeHHHHHHHHhc-CccHHHHHHHhhhh
Q 009980          481 DEIFDLMDANNDGKVTFDEFRAAMQR-DSSLQDVVLSSLRQ  520 (521)
Q Consensus       481 ~~~f~~~D~~~dG~I~~~Ef~~~~~~-~~~~~~~~~~~~~~  520 (521)
                      ..+|+.+|+|++|.|+.+||+.++.. +..+++++++.|++
T Consensus        86 ~~aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~  126 (146)
T d1lkja_          86 LEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLR  126 (146)
T ss_dssp             HHHHHHHCSSSSCEEEHHHHHHHHHHHTCSCCHHHHHHHHH
T ss_pred             HHHHHHhCCCCCCcCcHHHHHHHHHHcCCcccHHHHHHHHH
Confidence            99999999999999999999999988 89999999999875

>d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.45  E-value=8.5e-14  Score=98.58  Aligned_cols=64  Identities=27%  Similarity=0.570  Sum_probs=59.9

Q ss_pred             HHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHH
Q 009980          435 DDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAM  504 (521)
Q Consensus       435 ~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~  504 (521)
                      +++++.+|+.||+|++|+|+.+||+.++..++..      .+++++..+|+.+|.|+||.|+|+||.++|
T Consensus         2 eeel~~aF~~fD~d~~G~I~~~el~~~l~~lg~~------~~~~e~~~l~~~~D~d~~g~I~~~eF~~~m   65 (65)
T d1fw4a_           2 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK------LTDEEVDEMIREADIDGDGQVNYEEFVQMM   65 (65)
T ss_dssp             CHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCC------CCHHHHHHHHHTTCTTCSSSEEHHHHHHHC
T ss_pred             HHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCC------CCHHHHHHHHHHcCCCCCCcEeHHHHHHHC
Confidence            5789999999999999999999999999999876      678899999999999999999999999875

>d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.44  E-value=2.1e-13  Score=99.45  Aligned_cols=69  Identities=30%  Similarity=0.623  Sum_probs=63.2

Q ss_pred             CCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          432 SQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       432 ~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      ..++++++.+|+.||+|++|+|+.+||+.++..++..      .++++++.+|+.+|.|+||+|+|+||+++|+.
T Consensus         5 ~~~eeel~~~F~~fD~~~~G~I~~~el~~~l~~lg~~------~~~~e~~~~~~~~D~d~dg~I~~~EF~~~m~~   73 (75)
T d1jc2a_           5 GKSEEELANCFRIFDKNADGFIDIEELGEILRATGEH------VIEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG   73 (75)
T ss_dssp             CCCHHHHHHHHHHHCCSTTSSEEHHHHHHHHHHSSSC------CCHHHHHHHHHHHCSSSCSEECHHHHHHHHHT
T ss_pred             CCcHHHHHHHHHHHcCCCcCeEcHHHHHHHHHhcCCC------ccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence            3567889999999999999999999999999998875      77889999999999999999999999999864

>d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=99.43  E-value=1.4e-13  Score=116.36  Aligned_cols=115  Identities=19%  Similarity=0.191  Sum_probs=98.5

Q ss_pred             hHHHHHHHHcC--CCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChh
Q 009980          401 LAPRIFDLFDN--NRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPG  478 (521)
Q Consensus       401 ~~~~~f~~~D~--~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~  478 (521)
                      +++++|..||.  |++|.|+.+||..+++.++..++++++..+ ...|.+++|.|+++||..++......    .....+
T Consensus         8 ~l~~~F~~fD~~~~~dG~I~~~el~~~l~~lG~~~t~~e~~~~-~~~~~~~~~~i~~~eFl~~~~~~~~~----~~~~~~   82 (152)
T d1wdcc_           8 DLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAV-GGTHKMGEKSLPFEEFLPAYEGLMDC----EQGTFA   82 (152)
T ss_dssp             HHHHHHHHHHHHTCSSSCEEGGGHHHHHHHTTCCCCHHHHHHT-TCCSSTTSCEECHHHHHHHHHHHTTS----CCCCHH
T ss_pred             HHHHHHHHHCcCCCCCCeECHHHHHHHHHHhccCccHhhhhhh-hhhhcccccccccccccccccccccc----chhHHH
Confidence            46678999994  899999999999999999988898888775 45688899999999999988754321    113456


Q ss_pred             HHHHHHHHhcCCCCcceeHHHHHHHHhc-CccHHHHHHHhhhh
Q 009980          479 KLDEIFDLMDANNDGKVTFDEFRAAMQR-DSSLQDVVLSSLRQ  520 (521)
Q Consensus       479 ~~~~~f~~~D~~~dG~I~~~Ef~~~~~~-~~~~~~~~~~~~~~  520 (521)
                      ++..+|+.+|.|++|+|+.+||+++|.. +..+|+++++.|++
T Consensus        83 ~l~~aF~~~D~~~~G~I~~~el~~~l~~~g~~ls~~e~~~l~~  125 (152)
T d1wdcc_          83 DYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIK  125 (152)
T ss_dssp             HHHHHHHTTCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHH
T ss_pred             hhhhhhhccccccCccchHHHHHHHHHHcCCCCCHHHHHHHHH
Confidence            8999999999999999999999999998 89999999999875

>d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=7.4e-14  Score=116.56  Aligned_cols=116  Identities=18%  Similarity=0.364  Sum_probs=102.8

Q ss_pred             chHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhH
Q 009980          400 PLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGK  479 (521)
Q Consensus       400 ~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~  479 (521)
                      .+++++|..+|+|++|.|++.||..++...+...++..+..++..+|.+++|.|+.+||...+......     ....++
T Consensus         6 ~elk~~F~~~D~~~~G~Is~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~-----~~~~~~   80 (141)
T d2obha1           6 QEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSE-----KDTKEE   80 (141)
T ss_dssp             HHHHHHHHTTCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHH-----HHHHHH
T ss_pred             HHHHHHHHHHcCCCCCeEeHHHHHHHHHhcCCchhHHHHHHHHHhhccCCCCeechHHHHHHHHHHHhh-----hccHHH
Confidence            477899999999999999999999999999999999999999999999999999999999988653211     012457


Q ss_pred             HHHHHHHhcCCCCcceeHHHHHHHHhc-CccHHHHHHHhhhh
Q 009980          480 LDEIFDLMDANNDGKVTFDEFRAAMQR-DSSLQDVVLSSLRQ  520 (521)
Q Consensus       480 ~~~~f~~~D~~~dG~I~~~Ef~~~~~~-~~~~~~~~~~~~~~  520 (521)
                      +..+|..+|.+++|.|+.+||..++.. +..+++.++..+++
T Consensus        81 l~~~f~~~d~~~~G~i~~~el~~~l~~~g~~l~~~e~~~l~~  122 (141)
T d2obha1          81 ILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMID  122 (141)
T ss_dssp             HHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred             HHHHHHHhcccCCCCccHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence            899999999999999999999999998 89999999998875

>d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Light Chain Mlc1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.43  E-value=3.9e-14  Score=119.01  Aligned_cols=119  Identities=13%  Similarity=0.268  Sum_probs=96.8

Q ss_pred             HHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhH-hhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHH
Q 009980          402 APRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQ-MYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKL  480 (521)
Q Consensus       402 ~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~-~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~  480 (521)
                      ++++|+.+|.|++|.|+.+||..+++.++..++.+++..++. ..+.+.+|.|+++||..++...............+++
T Consensus         4 ~k~~F~~~D~d~~G~I~~~el~~~l~~lg~~~s~~ei~~l~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~~~~~~~~~l   83 (146)
T d1m45a_           4 NKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAKTEDF   83 (146)
T ss_dssp             CTTCHHHHCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGCCCTHHH
T ss_pred             HHHHHHHHcCCCcCCCCHHHHHHHHHHcCCchhHHHHhhhhccccccccccccccchhhhhhhhhcccccccccchHHHH
Confidence            567899999999999999999999999999899999999886 4667778999999999988643111000111344679


Q ss_pred             HHHHHHhcCCCCcceeHHHHHHHHhc-CccHHHHHHHhhhh
Q 009980          481 DEIFDLMDANNDGKVTFDEFRAAMQR-DSSLQDVVLSSLRQ  520 (521)
Q Consensus       481 ~~~f~~~D~~~dG~I~~~Ef~~~~~~-~~~~~~~~~~~~~~  520 (521)
                      ..+|+.+|.+++|.|+.+||..+|.. +..++++++..|++
T Consensus        84 ~~~F~~~D~~~~G~I~~~el~~~l~~~g~~l~~~ei~~l~~  124 (146)
T d1m45a_          84 VKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLK  124 (146)
T ss_dssp             HHHHHTTCSSSSSEEEHHHHHHHHHHSTTCCCHHHHHHHHT
T ss_pred             HHHHHhhccccccccchhhhhhhhcccCCcchHHHHHHHHH
Confidence            99999999999999999999999998 88899999999886

>d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Polcalcin
domain: Polcalcin Che a 3
species: Pigweed (Chenopodium album) [TaxId: 3559]

Probab=99.42  E-value=2.5e-13  Score=100.72  Aligned_cols=69  Identities=22%  Similarity=0.283  Sum_probs=64.2

Q ss_pred             CHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhc
Q 009980          360 NEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSL  429 (521)
Q Consensus       360 ~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~  429 (521)
                      |++++.+++++|+.+|.|++| |+..||..+|+.+| .++..++.++|+.+|.|++|.|+|+||+.++...
T Consensus         1 T~ee~~e~~~~F~~~D~d~~G~I~~~El~~~l~~lg-~~~~~ei~~~~~~~D~d~~G~I~~~EF~~~~~~~   70 (81)
T d2opoa1           1 TPQDIADRERIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARAN   70 (81)
T ss_dssp             CHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTT-TCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC
T ss_pred             CHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhh-cCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHC
Confidence            578999999999999999999 99999999999998 5788899999999999999999999999988753

>d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]

Probab=99.41  E-value=3e-13  Score=100.26  Aligned_cols=69  Identities=30%  Similarity=0.530  Sum_probs=63.0

Q ss_pred             CCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          432 SQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       432 ~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      ..++++++.+|+.||.|++|+|+.+||..++..++..      .++++++.+|+.+|.|+||+|+|+||+++|+.
T Consensus        11 ~~~ee~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~------~~~~ev~~~~~~~D~d~dg~I~~~EF~~~m~~   79 (81)
T d1fi5a_          11 GKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGET------ITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG   79 (81)
T ss_dssp             CCCHHHHHHHHHHHCSSCSSEECHHHHHHHHHTSSSC------CCHHHHHHHHHHHCSSSSSSEEHHHHHHHHSC
T ss_pred             CCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhcCCC------CCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence            3467889999999999999999999999999998765      67789999999999999999999999999874

>d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium vector protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=99.41  E-value=9.8e-14  Score=99.05  Aligned_cols=66  Identities=15%  Similarity=0.404  Sum_probs=60.5

Q ss_pred             HHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          436 DALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       436 ~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      ++++.+|+.||.|++|+|+.+||+.++..++..     ..++++++.+|+.+|.|+||.|+|+||+.+|++
T Consensus         2 eel~~~F~~~D~d~~G~I~~~el~~~l~~~g~~-----~~s~~e~~~~~~~~D~d~dG~i~~~EF~~~m~r   67 (68)
T d1c7va_           2 EEILRAFKVFDANGDGVIDFDEFKFIMQKVGEE-----PLTDAEVEEAMKEADEDGNGVIDIPEFMDLIKK   67 (68)
T ss_dssp             HHHHHHHHHHSCSGGGEECHHHHHHHSSTTTTC-----CCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHHC
T ss_pred             HHHHHHHHHHcCCCcCeEcHHHHHHHHHHhCCC-----CCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence            578999999999999999999999999988764     257889999999999999999999999999875

>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Caltractin (centrin 2)
species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]

Probab=99.40  E-value=3.8e-13  Score=98.87  Aligned_cols=70  Identities=24%  Similarity=0.460  Sum_probs=63.2

Q ss_pred             CCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          431 KSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       431 ~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      ...++++++.+|+.||.|++|+|+.+||..++..++..      .+++++..+|+.+|.|++|.|+|+||+++|++
T Consensus         4 e~d~~e~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~------~~~~e~~~~~~~~D~d~~G~I~~~EF~~~m~k   73 (77)
T d1oqpa_           4 ERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGEN------LTEEELQEMIAEADRNDDNEIDEDEFIRIMKK   73 (77)
T ss_dssp             TSSHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHTCC------CCHHHHHHHHHHHCCSSSSEECHHHHHHHHHH
T ss_pred             CccHHHHHHHHHHHHcCCCCCEechHHHHHHHHHhCCC------CCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHc
Confidence            34567789999999999999999999999999998765      67789999999999999999999999999876

>d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.39  E-value=3.2e-13  Score=99.27  Aligned_cols=72  Identities=18%  Similarity=0.331  Sum_probs=67.9

Q ss_pred             CCCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhh
Q 009980          357 HDLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSS  428 (521)
Q Consensus       357 ~~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~  428 (521)
                      .++|++++.+++++|..+|.|++| |+..||..+|+.+|..++..++.++++.+|.+++|.|+|+||+.++..
T Consensus         2 ~~lt~eqi~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~t~~e~~~~~~~~D~~~~g~I~~~eF~~~m~~   74 (77)
T d1f54a_           2 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSR   74 (77)
T ss_dssp             CCCCHHHHHHHHHHHHHTCTTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHTTCCSSCCEEEHHHHHHHHTT
T ss_pred             CCCCHHHHHHHHHHHHHHcCCCCCeEChHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            468999999999999999999999 999999999999999999999999999999999999999999998754

>d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=1.9e-13  Score=113.72  Aligned_cols=117  Identities=17%  Similarity=0.168  Sum_probs=97.9

Q ss_pred             hHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhcc--CCCcceeHHHHHHHHHhCCCCCCCCCCCChh
Q 009980          401 LAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDI--DRSGCITKEEVASMLRALPDDCLPVDITEPG  478 (521)
Q Consensus       401 ~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~--d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~  478 (521)
                      +++++|..+|.+++|.|+.+|+..+++.++..+++.++..++..++.  +++|.|++++|..++........   ....+
T Consensus         1 e~ke~F~~~D~d~~G~I~~~el~~~l~~lg~~~t~~e~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~---~~~~~   77 (139)
T d1w7jb1           1 EFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRG---QGTYE   77 (139)
T ss_dssp             CHHHHHHHHCCSSSSEEESTTHHHHHHHTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC-----------
T ss_pred             CHHHHHHHHhCCCCCeECHHHHHHHHHHhccCCCHHHHHHHHHHHhcccccCCceeeeccchhhHhhhhhcc---ccHHH
Confidence            46889999999999999999999999999999999999999988764  67999999999998875432211   12234


Q ss_pred             HHHHHHHHhcCCCCcceeHHHHHHHHhc-CccHHHHHHHhhhh
Q 009980          479 KLDEIFDLMDANNDGKVTFDEFRAAMQR-DSSLQDVVLSSLRQ  520 (521)
Q Consensus       479 ~~~~~f~~~D~~~dG~I~~~Ef~~~~~~-~~~~~~~~~~~~~~  520 (521)
                      ++..+|+.+|+|++|+|+.+||++++.. +..+++++++.|++
T Consensus        78 ~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~  120 (139)
T d1w7jb1          78 DYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLA  120 (139)
T ss_dssp             CCHHHHHTTCTTSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHT
T ss_pred             HHHHhhhhccCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHh
Confidence            5788999999999999999999999988 88899999988875

>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin-related protein T21P5.17
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.39  E-value=5.5e-13  Score=94.98  Aligned_cols=64  Identities=17%  Similarity=0.428  Sum_probs=59.4

Q ss_pred             HHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          437 ALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       437 ~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      .++.+|+.||.|++|+|+.+||..++..++..      .+++++..+|+.+|.|+||.|+|+||..+|.+
T Consensus         2 ~~r~~F~~~D~d~~G~I~~~El~~~l~~lg~~------~~~~~i~~~~~~~D~d~dg~I~~~EF~~~m~~   65 (67)
T d1tiza_           2 SAKRVFEKFDKNKDGKLSLDEFREVALAFSPY------FTQEDIVKFFEEIDVDGNGELNADEFTSCIEK   65 (67)
T ss_dssp             THHHHHHHHCTTSSSCEEHHHHHHHHHHTCTT------SCHHHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred             hHHHHHHHHCCCCcCcCcHHHHHHHHHHhccc------cchHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            36899999999999999999999999998875      67889999999999999999999999999875

>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.38  E-value=5.9e-13  Score=98.67  Aligned_cols=70  Identities=23%  Similarity=0.369  Sum_probs=67.0

Q ss_pred             CCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhh
Q 009980          359 LNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSS  428 (521)
Q Consensus       359 ~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~  428 (521)
                      +|++++.+++.+|..+|.|++| |+..||..+|+.+|...+..++.++|+.+|.|++|.|+|+||+.++..
T Consensus         8 Lt~~~i~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s~~e~~~~~~~~D~d~~g~I~~~eF~~~m~~   78 (81)
T d1avsa_           8 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR   78 (81)
T ss_dssp             BCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHcCCCCCeEchhHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            7899999999999999999999 999999999999999999999999999999999999999999998864

>d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Rattus norvegicus [TaxId: 10116]

Probab=99.37  E-value=4.1e-13  Score=97.47  Aligned_cols=69  Identities=23%  Similarity=0.403  Sum_probs=65.2

Q ss_pred             CCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHh
Q 009980          359 LNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFS  427 (521)
Q Consensus       359 ~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~  427 (521)
                      +|++++.+++.+|+.+|.|++| |+..||..+++.+|...+.+++.++++.+|.|++|.|+|+||+.+|.
T Consensus         2 Ls~eei~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s~~~~~~~~~~~D~d~~g~I~f~eF~~~m~   71 (73)
T d2pq3a1           2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA   71 (73)
T ss_dssp             CCHHHHHHHHHHHHHTCTTSSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred             cCHHHHHHHHHHHHHHcCCCCceEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence            6889999999999999999999 99999999999999999999999999999999999999999998875

>d2mysb_ a.39.1.5 (B:) Myosin Essential Chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.36  E-value=5.2e-13  Score=111.79  Aligned_cols=112  Identities=13%  Similarity=0.197  Sum_probs=93.2

Q ss_pred             hHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHH
Q 009980          401 LAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKL  480 (521)
Q Consensus       401 ~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~  480 (521)
                      +++++|..+|.+++|.|+.+||..+++.++...+..++   +..++.+++|.|+++||..++......     ....+++
T Consensus         8 el~e~F~~~D~~~~G~I~~~e~~~~l~~lg~~~~~~~~---~~~~~~~~~g~i~~~eF~~~~~~~~~~-----~~~~~~l   79 (145)
T d2mysb_           8 DFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEE---LDAMIKEASGPINFTVFLTMFGEKLKG-----ADPEDVI   79 (145)
T ss_pred             HHHHHHHHHCCCCCCCCCHHHHHHHHHHhCCCcchHHH---HHHHHHhccCceeechhhhhhhhcccc-----cchHHHH
Confidence            46778999999999999999999999988865554433   445667889999999999988654322     1345679


Q ss_pred             HHHHHHhcCCCCcceeHHHHHHHHhc-CccHHHHHHHhhhh
Q 009980          481 DEIFDLMDANNDGKVTFDEFRAAMQR-DSSLQDVVLSSLRQ  520 (521)
Q Consensus       481 ~~~f~~~D~~~dG~I~~~Ef~~~~~~-~~~~~~~~~~~~~~  520 (521)
                      ..+|+.+|.+++|.|+.+||+++|+. +.++|+++++.+++
T Consensus        80 ~~aF~~fD~~~~g~I~~~el~~~l~~~g~~ls~~e~~~~~~  120 (145)
T d2mysb_          80 MGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWA  120 (145)
T ss_pred             HHHHHhhhhcccchhhHHHHHHHHHHcCCCCCHHHHHHHHH
Confidence            99999999999999999999999998 88999999999875

>d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Polcalcin
domain: Polcalcin Che a 3
species: Pigweed (Chenopodium album) [TaxId: 3559]

Probab=99.36  E-value=1.2e-12  Score=97.02  Aligned_cols=69  Identities=23%  Similarity=0.469  Sum_probs=61.7

Q ss_pred             HHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhcCccHH
Q 009980          436 DALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDSSLQ  511 (521)
Q Consensus       436 ~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~~~~~~  511 (521)
                      .+++.+|+.||.|++|+|+.+||..++..++.       .+++++..+|+.+|.|+||.|+|+||+.+|+......
T Consensus         6 ~e~~~~F~~~D~d~~G~I~~~El~~~l~~lg~-------~~~~ei~~~~~~~D~d~~G~I~~~EF~~~~~~~~~~~   74 (81)
T d2opoa1           6 ADRERIFKRFDTNGDGKISSSELGDALKTLGS-------VTPDEVRRMMAEIDTDGDGFISFDEFTDFARANRGLV   74 (81)
T ss_dssp             HHHHHHHHHHCTTCSSEEEHHHHHHHHHTTTT-------CCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHCTTTH
T ss_pred             HHHHHHHHHHCCCCCCCCcHHHHHHHHHHhhc-------CCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHCccch
Confidence            46889999999999999999999999998862       4667899999999999999999999999998865544

>d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.35  E-value=8.1e-13  Score=92.02  Aligned_cols=61  Identities=18%  Similarity=0.485  Sum_probs=57.0

Q ss_pred             HHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHH
Q 009980          436 DALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRA  502 (521)
Q Consensus       436 ~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~  502 (521)
                      ++++.+|+.||++++|+|+.+||+.++..++..      .++.++..+|+.+|.|++|.|+|+||++
T Consensus         1 Eel~~aF~~fD~~~~G~I~~~el~~~l~~~g~~------~~~~ei~~l~~~~D~d~dg~I~~~eFl~   61 (61)
T d2fcea1           1 EDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEK------LTDAEVDELLKGVEVDSNGEIDYKKFIE   61 (61)
T ss_dssp             HHHHHHHHHHCTTCCSCEEHHHHHHHHHHTTCC------CCHHHHHHHHTTCCCCTTSEECHHHHHH
T ss_pred             ChHHHHHHHHCCCCCCeEeHHHHHHHHHHcCCC------CCHHHHHHHHHHcCCCCCCcEeHHHhcC
Confidence            468999999999999999999999999998876      7788999999999999999999999974

>d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.35  E-value=2.1e-12  Score=113.32  Aligned_cols=110  Identities=23%  Similarity=0.343  Sum_probs=92.7

Q ss_pred             HHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccC------------CC
Q 009980          367 LRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRK------------SQ  433 (521)
Q Consensus       367 l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~------------~~  433 (521)
                      ..++|+.+|.+++| |+..||..++..+......+.++.+|+.+|.|++|.|+++||..++.....            ..
T Consensus        65 ~~~if~~~D~~~~G~I~~~Ef~~~~~~~~~~~~~e~~~~~F~~~D~d~dG~is~~E~~~~~~~~~~~~~~~~~~~~~~~~  144 (190)
T d1fpwa_          65 ANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEAT  144 (190)
T ss_dssp             HHHHHHTCCSSCSSEECHHHHHHHHHHHSCCCSTHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCCCC
T ss_pred             HHHHHHHhCcCCCCcccHHHHHHHHHHHccCchHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHHhcccccCCCchhhh
Confidence            35679999999999 999999999999888788889999999999999999999999998865421            12


Q ss_pred             cHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhc
Q 009980          434 GDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMD  488 (521)
Q Consensus       434 ~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D  488 (521)
                      .++.+..+|+.+|.|+||.|+++||..++....            .+...|..+|
T Consensus       145 ~~~~v~~if~~~D~d~dG~Is~~EF~~~~~~~p------------~i~~~l~~~d  187 (190)
T d1fpwa_         145 PEMRVKKIFKLMDKNEDGYITLDEFREGSKVDP------------SIIGALNLYD  187 (190)
T ss_dssp             HHHHHHHHHHHHTTTCSSEEEHHHHHHHHHSST------------THHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHCH------------HHHHHhhhhc
Confidence            346789999999999999999999999987521            4556676665

>d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

Probab=99.34  E-value=2.5e-13  Score=102.12  Aligned_cols=85  Identities=24%  Similarity=0.404  Sum_probs=67.6

Q ss_pred             CCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCC
Q 009980          412 NRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANN  491 (521)
Q Consensus       412 ~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~  491 (521)
                      +.+|.|+.++..  +...........++.+|+.||.|++|+|+.+||+.++..++..      .+++++..+|+.+|.|+
T Consensus         1 ~~~g~id~~~~~--ma~~l~~~~i~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~------~s~~e~~~l~~~~D~d~   72 (87)
T d1s6ja_           1 HSSGHIDDDDKH--MAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSE------LMESEIKDLMDAADIDK   72 (87)
T ss_dssp             CCSSSSSSHHHH--SSSSSCSSSTTTTTTHHHHHCTTCSSCEEHHHHHHHHHTTTSS------CCHHHHHHHHHHHCTTC
T ss_pred             CCCCccCchHHH--HHhhCCHHHHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCC------CCHHHHHHHHHHcCCCC
Confidence            457888888843  2221111122358889999999999999999999999998765      67789999999999999


Q ss_pred             CcceeHHHHHHHH
Q 009980          492 DGKVTFDEFRAAM  504 (521)
Q Consensus       492 dG~I~~~Ef~~~~  504 (521)
                      +|.|+|+||+.+|
T Consensus        73 ~g~I~~~EFl~am   85 (87)
T d1s6ja_          73 SGTIDYGEFIAAT   85 (87)
T ss_dssp             SSEECHHHHTTCC
T ss_pred             CCeEeHHHHHHHH
Confidence            9999999998765

>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.34  E-value=1.6e-12  Score=96.34  Aligned_cols=65  Identities=29%  Similarity=0.606  Sum_probs=60.1

Q ss_pred             HHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          436 DALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       436 ~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      ++++.+|+.||.|++|+|+.+||..++..++..      .++.++..+|+.+|.|+||.|+|+||..+|..
T Consensus        14 ~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~------~s~~e~~~~~~~~D~d~~g~I~~~eF~~~m~~   78 (81)
T d1avsa_          14 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQN------PTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR   78 (81)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCC------CCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCCeEchhHHHHHHHHcCCC------CCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            467889999999999999999999999998876      67889999999999999999999999999864

>d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Phospholipase C-beta-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=5.8e-14  Score=120.73  Aligned_cols=137  Identities=12%  Similarity=0.081  Sum_probs=91.1

Q ss_pred             HHHHHHh--hhcCCCC-CCHHHHHHHHHhcCCCC--CcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHH
Q 009980          367 LRIHFRT--ICANGDN-ATLSEFEEVLKAMNMSS--LVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLC  441 (521)
Q Consensus       367 l~~~F~~--~D~~~~g-i~~~el~~~l~~~~~~~--~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~  441 (521)
                      ++++|..  +|.|++| |+.+||..+++..+...  ....+..+|...|.+++|.|+|+||..++..+..   ..++..+
T Consensus         7 l~k~~~k~~~d~n~dG~Is~~el~k~l~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~F~eF~~~~~~l~~---r~ei~~~   83 (170)
T d2zkmx1           7 LDKILVKLKMQLNSEGKIPVKNFFQMFPADRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLCP---RPEIDEI   83 (170)
T ss_dssp             HHHHHHHHHHSCCTTSCEEHHHHHHHSCSCHHHHHHHHHHTTCCCCTTCEECGGGCCHHHHHHHHHHHSC---CHHHHTT
T ss_pred             HHHHHHHHhcccCCCCCCcHHHHHHHHHHhhhhHHHHHHHHhhhhccccccCCCccCHHHHHHHHhccCC---HHHHHHH
Confidence            4445554  7999999 99999999987543211  1234456778889999999999999999887643   4579999


Q ss_pred             hHhhccCCCcceeHHHHHHHHHhCCCCCCCCC----CCChhHHHHHHHHhcCCCC----cceeHHHHHHHHhc
Q 009980          442 FQMYDIDRSGCITKEEVASMLRALPDDCLPVD----ITEPGKLDEIFDLMDANND----GKVTFDEFRAAMQR  506 (521)
Q Consensus       442 f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~----~~~~~~~~~~f~~~D~~~d----G~I~~~Ef~~~~~~  506 (521)
                      |..+|.|++|+||.+||..++..........+    ..+.+.+..++..++.+.+    |.|++++|..+|..
T Consensus        84 F~~~d~d~~~~it~~el~~fL~~~Q~~~~~~e~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ls~d~F~~fL~S  156 (170)
T d2zkmx1          84 FTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDKYEPSGINAQRGQLSPEGMVWFLCG  156 (170)
T ss_dssp             CC--------CCCHHHHHHHHHHTCC---------------CHHHHHHHHCCC--------CCHHHHHHHHHS
T ss_pred             HHHHcCCCCCcccHHHHHHHHHHHhcchhhhhhccccCCHHHHHHHHHHHccccccccCCeECHHHHHHHHcC
Confidence            99999999999999999999987544311111    1345678889999877654    89999999998866

>d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

Probab=99.34  E-value=1.3e-12  Score=96.73  Aligned_cols=71  Identities=21%  Similarity=0.355  Sum_probs=66.9

Q ss_pred             CCCHHHHHHHHHHHHhhhcCC-CC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhh
Q 009980          358 DLNEEEIQNLRIHFRTICANG-DN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSS  428 (521)
Q Consensus       358 ~~~~~~~~~l~~~F~~~D~~~-~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~  428 (521)
                      .++++++.+++.+|+.+|.+| +| |+..||..+|+.+|..++..++.++++.+|.|++|.|+|+||+.++..
T Consensus         8 ~ls~eq~~~~~~~F~~fD~d~~~G~I~~~el~~~l~~lg~~~t~~el~~~i~~~D~d~~G~I~f~eFl~im~~   80 (82)
T d1wrka1           8 QLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVR   80 (82)
T ss_dssp             HCCHHHHHHHHHHHHHHTTTCTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTCCSSBCHHHHHHHHHH
T ss_pred             hCCHHHHHHHHHHHHHHcCcCCCCeEeHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHh
Confidence            378999999999999999996 79 999999999999999999999999999999999999999999998764

>d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.33  E-value=1.4e-12  Score=110.64  Aligned_cols=118  Identities=20%  Similarity=0.314  Sum_probs=98.6

Q ss_pred             hHHHHHHHHcCCC-CcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhH
Q 009980          401 LAPRIFDLFDNNR-DGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGK  479 (521)
Q Consensus       401 ~~~~~f~~~D~~~-~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~  479 (521)
                      +++++|+.+|.|+ ||.|+.+||..+++.++...+..++..++..++.+++|.++.+++...........  .....++.
T Consensus        15 ~l~~~F~~~D~d~~dG~I~~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~   92 (156)
T d1dtla_          15 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDD--SKGKSEEE   92 (156)
T ss_dssp             HHHHHHHHHTTTCGGGSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC-------CHHHH
T ss_pred             HHHHHHHHHcCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhhccCCCccchhhhhhhhhhccccc--ccccHHHH
Confidence            4577899999995 89999999999999999999999999999999999999999999987665321110  01134567


Q ss_pred             HHHHHHHhcCCCCcceeHHHHHHHHhc-CccHHHHHHHhhhh
Q 009980          480 LDEIFDLMDANNDGKVTFDEFRAAMQR-DSSLQDVVLSSLRQ  520 (521)
Q Consensus       480 ~~~~f~~~D~~~dG~I~~~Ef~~~~~~-~~~~~~~~~~~~~~  520 (521)
                      +..+|+.+|.|++|+|+.+||.+++.. ++.+++++++.|++
T Consensus        93 l~~~F~~~D~d~~G~I~~~e~~~~~~~~~~~ls~~e~~~i~~  134 (156)
T d1dtla_          93 LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMK  134 (156)
T ss_dssp             HHHHHHHHCTTCSSEEEHHHHGGGGTTC--CCCHHHHHHHHH
T ss_pred             HHHHHHHhCcCCCCcCcHHHHHHHHhhcCCCCCHHHHHHHHH
Confidence            899999999999999999999999998 89999999999875

>d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.33  E-value=2.4e-12  Score=109.93  Aligned_cols=118  Identities=20%  Similarity=0.305  Sum_probs=98.4

Q ss_pred             hHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHH
Q 009980          401 LAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKL  480 (521)
Q Consensus       401 ~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~  480 (521)
                      +++++|..+|.|++|.|+++||..++...+...++..+..+|..+|.+++|.++..|+...+.......  ......+.+
T Consensus        21 el~~~F~~~D~d~~G~Is~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~e~~~~~~~~~~~~--~~~~~~~~~   98 (162)
T d1topa_          21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKED--AKGKSEEEL   98 (162)
T ss_dssp             HHHHHHHTTTCSCSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHH--HHHHHHHHH
T ss_pred             HHHHHHHHHcCCCCCeEcHHHHHHHHhccCCchhHHHHHhhhheeccCCCCCeeeehhhhhhhhhhhhh--cccCcHHHH
Confidence            467899999999999999999999999988889999999999999999999999999977654311000  000123467


Q ss_pred             HHHHHHhcCCCCcceeHHHHHHHHhc-CccHHHHHHHhhhh
Q 009980          481 DEIFDLMDANNDGKVTFDEFRAAMQR-DSSLQDVVLSSLRQ  520 (521)
Q Consensus       481 ~~~f~~~D~~~dG~I~~~Ef~~~~~~-~~~~~~~~~~~~~~  520 (521)
                      ..+|+.+|.|++|+|+.+||..++.. +...++++++.|++
T Consensus        99 ~~aF~~~D~d~~G~Is~~e~~~~l~~~~~~~~~~~~~~l~~  139 (162)
T d1topa_          99 ANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMK  139 (162)
T ss_dssp             HHHHHHHCTTCSSCBCHHHHHHHHHTTTCCCCHHHHHHHHH
T ss_pred             HHHHHHHCCCCCCCCcHHHHHHHHHhhCCCCCHHHHHHHHH
Confidence            88999999999999999999999998 77888889888875

>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

Probab=99.32  E-value=4.5e-12  Score=99.40  Aligned_cols=99  Identities=14%  Similarity=0.275  Sum_probs=78.1

Q ss_pred             CCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhc---cCCCc
Q 009980          359 LNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSL---RKSQG  434 (521)
Q Consensus       359 ~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~---~~~~~  434 (521)
                      ++.+++.++   +..+  +++| |+..||...+...  ..+.+.++++|+.+|.|++|.|+.+|+..++..+   +...+
T Consensus         6 l~~eeI~~~---~~~~--d~dG~idf~EF~~~~~~~--~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~~ls   78 (109)
T d1pvaa_           6 LKADDIKKA---LDAV--KAEGSFNHKKFFALVGLK--AMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLT   78 (109)
T ss_dssp             SCHHHHHHH---HHHT--CSTTCCCHHHHHHHHTCT--TSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCCCC
T ss_pred             CCHHHHHHH---HHhc--CCCCCCcHHHHHHHHHHc--cCCHHHHHHHhhCccCCCcCeEcHHHHHHHHHHhhhcCCCCC
Confidence            445555444   3333  4567 9999997765422  2345688999999999999999999999888776   44578


Q ss_pred             HHHHHHHhHhhccCCCcceeHHHHHHHHHh
Q 009980          435 DDALRLCFQMYDIDRSGCITKEEVASMLRA  464 (521)
Q Consensus       435 ~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~  464 (521)
                      +++++.+|+.+|.|+||.|+++||..++..
T Consensus        79 ~~ev~~~~~~~D~d~dG~I~~~EF~~~m~~  108 (109)
T d1pvaa_          79 DAETKAFLKAADKDGDGKIGIDEFETLVHE  108 (109)
T ss_dssp             HHHHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred             HHHHHHHHHHHCCCCcCcEeHHHHHHHHHh
Confidence            899999999999999999999999998863

>d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Leopard shark (Triakis semifasciata) [TaxId: 30493]

Probab=99.31  E-value=8.1e-12  Score=97.88  Aligned_cols=99  Identities=15%  Similarity=0.273  Sum_probs=77.9

Q ss_pred             CCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhc---cCCCc
Q 009980          359 LNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSL---RKSQG  434 (521)
Q Consensus       359 ~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~---~~~~~  434 (521)
                      ++.+++.++   +..+|  .+| |+..||...+..  ...+.+.++++|+.+|.|++|.|+.+|+..++..+   +...+
T Consensus         6 l~~~di~~~---~~~~~--~~G~idf~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~~~~   78 (109)
T d5pala_           6 LKADDINKA---ISAFK--DPGTFDYKRFFHLVGL--KGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLN   78 (109)
T ss_dssp             SCHHHHHHH---HHHTC--STTCCCHHHHHHHHTC--TTCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCCC
T ss_pred             ccHHHHHHH---HHhcC--CCCcCcHHHHHHHHHh--cCCCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHhhhccCcCC
Confidence            455555444   44444  446 999999766532  22345689999999999999999999999888764   45678


Q ss_pred             HHHHHHHhHhhccCCCcceeHHHHHHHHHh
Q 009980          435 DDALRLCFQMYDIDRSGCITKEEVASMLRA  464 (521)
Q Consensus       435 ~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~  464 (521)
                      +++++.+|+.+|.|++|.|+++||..++..
T Consensus        79 ~~e~~~~~~~~D~d~dG~I~~~EF~~~m~~  108 (109)
T d5pala_          79 DTETKALLAAGDSDHDGKIGADEFAKMVAQ  108 (109)
T ss_dssp             HHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCCEeHHHHHHHHHh
Confidence            889999999999999999999999998864

>d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

Probab=99.31  E-value=1.8e-12  Score=112.82  Aligned_cols=114  Identities=21%  Similarity=0.339  Sum_probs=98.3

Q ss_pred             chHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhH
Q 009980          400 PLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGK  479 (521)
Q Consensus       400 ~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~  479 (521)
                      .+++++|+.+|.|++|.|+++||..++..++...+...+..+|+.+|.+++|.|++++|..+.......      ...+.
T Consensus        10 ~~l~~~F~~~D~d~dG~Is~~e~~~~l~~l~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~------~~~e~   83 (182)
T d1s6ia_          10 GGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKL------EREEN   83 (182)
T ss_dssp             CSHHHHHHTTSSSSSSCEEHHHHHHHHTTTTCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSS------CCCCS
T ss_pred             HHHHHHHHHHcCCCcCCCCHHHHHHHHHHcCCccccccchhhhhhhhccccccchHHHHHHHHHhhccc------ccHHH
Confidence            468899999999999999999999999999888999999999999999999999999999877654322      23346


Q ss_pred             HHHHHHHhcCCCCcceeHHHHHHHHhcCccHHHHHHHhhhh
Q 009980          480 LDEIFDLMDANNDGKVTFDEFRAAMQRDSSLQDVVLSSLRQ  520 (521)
Q Consensus       480 ~~~~f~~~D~~~dG~I~~~Ef~~~~~~~~~~~~~~~~~~~~  520 (521)
                      +..+|..+|.+++|.|+.++|.+++.... +++++++.|++
T Consensus        84 l~~aF~~~D~d~~G~i~~~el~~~l~~~g-l~~~ev~~~f~  123 (182)
T d1s6ia_          84 LVSAFSYFDKDGSGYITLDEIQQACKDFG-LDDIHIDDMIK  123 (182)
T ss_dssp             THHHHHHTTTTCSSEEEHHHHHHTTTTTT-CCTTHHHHHHH
T ss_pred             HHHHHHHHhhcCCCccchhhhhhhhhhcC-ccHHHHHHHHH
Confidence            88999999999999999999999998732 67777777764

>d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Rattus norvegicus [TaxId: 10116]

Probab=99.31  E-value=2e-12  Score=93.71  Aligned_cols=65  Identities=28%  Similarity=0.613  Sum_probs=60.0

Q ss_pred             HHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          436 DALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       436 ~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      .+++.+|+.||.|++|+|+.+||..++..++..      .+++++..+++.+|.|++|.|+|+||..+|..
T Consensus         8 ~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~------~s~~~~~~~~~~~D~d~~g~I~f~eF~~~m~~   72 (73)
T d2pq3a1           8 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN------PTEAELQDMINEVDADGNGTIDFPEFLTMMAR   72 (73)
T ss_dssp             HHHHHHHHHTCTTSSSEEEGGGHHHHHHHTTCC------CCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCceEeHHHHHHHHHHhCCC------CCHHHHHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence            468899999999999999999999999998875      67889999999999999999999999999863

>d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Recoverin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.30  E-value=3.2e-12  Score=113.27  Aligned_cols=118  Identities=15%  Similarity=0.210  Sum_probs=96.4

Q ss_pred             CCHHHHHHHHHhcCCCCCcchHHHHHHHH-cCCCCcceeHHHHHHHHhhccCC-CcHHHHHHHhHhhccCCCcceeHHHH
Q 009980          381 ATLSEFEEVLKAMNMSSLVPLAPRIFDLF-DNNRDGTVDMREILCGFSSLRKS-QGDDALRLCFQMYDIDRSGCITKEEV  458 (521)
Q Consensus       381 i~~~el~~~l~~~~~~~~~~~~~~~f~~~-D~~~~g~I~~~ef~~~~~~~~~~-~~~~~l~~~f~~~D~d~~G~I~~~e~  458 (521)
                      |+.+++..+.+..+  .+..++..+++.| +.+++|.|+++||..++...... .+...+..+|+.+|.|++|.|++.||
T Consensus         8 l~~e~l~~l~~~t~--f~~~ei~~l~~~F~~~~~~G~is~~EF~~~l~~~~~~~~~~~~~~~if~~~D~~~~G~I~f~EF   85 (201)
T d1omra_           8 LSKEILEELQLNTK--FTEEELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEY   85 (201)
T ss_dssp             HHHHHHHHHGGGCS--SCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHHCTTSCCHHHHHHHHHTTTSCSSSEEEHHHH
T ss_pred             CCHHHHHHHHHhCC--CCHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHhcCCCCHHHHHHHHHHHhccCCCCeEeehhH
Confidence            77778877766544  3467888888876 66789999999999999887654 34556688999999999999999999


Q ss_pred             HHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          459 ASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       459 ~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      ..++..+...      ..++.+..+|+.+|.|++|.|+.+||..++..
T Consensus        86 ~~~~~~~~~~------~~~~~l~~~F~~~D~d~~G~is~~E~~~~~~~  127 (201)
T d1omra_          86 VIALHMTSAG------KTNQKLEWAFSLYDVDGNGTISKNEVLEIVTA  127 (201)
T ss_dssp             HHHHHHHHSS------CGGGSHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             HHHHHhhccc------chHHHHHHHHHHHccCCCCccCHHHHHHHHHH
Confidence            9888765432      34567999999999999999999999998864

>d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.30  E-value=2.8e-12  Score=94.11  Aligned_cols=65  Identities=25%  Similarity=0.563  Sum_probs=60.1

Q ss_pred             HHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          436 DALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       436 ~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      ++++.+|+.||.|++|+|+.+||..++..++..      .+++++..+|+.+|.|++|.|+|+||..+|.+
T Consensus        10 ~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~------~t~~e~~~~~~~~D~~~~g~I~~~eF~~~m~~   74 (77)
T d1f54a_          10 AEFKEAFALFDKDNNGSISSSELATVMRSLGLS------PSEAEVNDLMNEIDVDGNHQIEFSEFLALMSR   74 (77)
T ss_dssp             HHHHHHHHHTCTTCSSEEEHHHHHHHHHHHTCC------CCHHHHHHHHHTTCCSSCCEEEHHHHHHHHTT
T ss_pred             HHHHHHHHHHcCCCCCeEChHHHHHHHHHhCCC------CCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            458889999999999999999999999998876      67889999999999999999999999999865

>d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Guanylate cyclase activating protein 2, GCAP-2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.28  E-value=1.1e-11  Score=108.48  Aligned_cols=101  Identities=18%  Similarity=0.224  Sum_probs=87.9

Q ss_pred             chHHHHHHHHcCC-CCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChh
Q 009980          400 PLAPRIFDLFDNN-RDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPG  478 (521)
Q Consensus       400 ~~~~~~f~~~D~~-~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~  478 (521)
                      .+++++|+.|+.+ .+|.|+++||..++...+...+...++.+|+.+|.|++|.|++.||...+......      ..++
T Consensus        21 ~ei~~~~~~F~~~~~~G~i~~~Ef~~~l~~~~~~~~~~~~~~lf~~~D~d~dG~I~f~Ef~~~l~~~~~~------~~~~   94 (189)
T d1jbaa_          21 AQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRG------TLEH   94 (189)
T ss_dssp             HHHHHHHHHHHSSSTTCCEEHHHHHHHHHCCSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSC------CCTH
T ss_pred             HHHHHHHHHhcccCCCCeeeHHHHHHHHHHcCCCccHHHHHHHHHHhccCCCCeEeehhHHHHHHhhccc------chHH
Confidence            4788889998765 48999999999999887777788889999999999999999999999999875433      3456


Q ss_pred             HHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          479 KLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       479 ~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      .+..+|+.+|.|++|.|+++||..++..
T Consensus        95 ~~~~~F~~~D~d~~g~i~~~E~~~~~~~  122 (189)
T d1jbaa_          95 KLKWTFKIYDKDRNGCIDRQELLDIVES  122 (189)
T ss_dssp             HHHHHHHHHCSSCSSCBCHHHHHHHHHH
T ss_pred             HHHHHHhhhccCCCCcccHhHHHHHHHH
Confidence            8899999999999999999999997754

>d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

Probab=99.26  E-value=6.6e-12  Score=92.83  Aligned_cols=65  Identities=29%  Similarity=0.633  Sum_probs=59.8

Q ss_pred             HHHHHHhHhhccCC-CcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          436 DALRLCFQMYDIDR-SGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       436 ~~l~~~f~~~D~d~-~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      ++++.+|+.||.|+ +|+|+..||..++..+|..      .++++++.+++.+|.|+||.|+|+||..+|.+
T Consensus        15 ~~~~~~F~~fD~d~~~G~I~~~el~~~l~~lg~~------~t~~el~~~i~~~D~d~~G~I~f~eFl~im~~   80 (82)
T d1wrka1          15 NEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQN------PTPEELQEMIDEVDEDGSGTVDFDEFLVMMVR   80 (82)
T ss_dssp             HHHHHHHHHHTTTCTTSSBCHHHHHHHHHHTTCC------CCHHHHHHHHHTTCTTCCSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCcCCCCeEeHHHHHHHHHHcCCC------CCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHh
Confidence            56889999999996 7999999999999999876      67889999999999999999999999999874

>d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Neurocalcin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.24  E-value=3.2e-11  Score=104.73  Aligned_cols=132  Identities=15%  Similarity=0.207  Sum_probs=102.5

Q ss_pred             CCHHHHHHHHHhcCCCCCcchHHHHHHHH-cCCCCcceeHHHHHHHHhhccCCCc-HHHHHHHhHhhccCCCcceeHHHH
Q 009980          381 ATLSEFEEVLKAMNMSSLVPLAPRIFDLF-DNNRDGTVDMREILCGFSSLRKSQG-DDALRLCFQMYDIDRSGCITKEEV  458 (521)
Q Consensus       381 i~~~el~~~l~~~~~~~~~~~~~~~f~~~-D~~~~g~I~~~ef~~~~~~~~~~~~-~~~l~~~f~~~D~d~~G~I~~~e~  458 (521)
                      ++.+++.+..+..+.+  ..+++.++..| +.+++|.|+.+||..++........ ...+..+|..+|.+++|.|+++||
T Consensus         4 l~~~~~~~L~~~t~fs--~~ei~~l~~~F~~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~i~~~eF   81 (181)
T d1bjfa_           4 LRPEVMQDLLESTDFT--EHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREF   81 (181)
T ss_dssp             CCHHHHHHHHHHSSCC--HHHHHHHHHHHHHHSTTSEEEHHHHHHHHTTTSSSSCCHHHHHHHHHHHCSSCSSEEEHHHH
T ss_pred             CCHHHHHHHHHhcCCC--HHHHHHHHHHHHhhCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhcCCCCCCcEeHHHH
Confidence            5666666666654433  56677777775 4478999999999999988665443 455788999999999999999999


Q ss_pred             HHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc-------------CccHHHHHHHhhhh
Q 009980          459 ASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR-------------DSSLQDVVLSSLRQ  520 (521)
Q Consensus       459 ~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~-------------~~~~~~~~~~~~~~  520 (521)
                      ..++......      ..++.+..+|+.+|.|+||+|+.+||..++..             .+.++++.++.|++
T Consensus        82 l~~~~~~~~~------~~~~~~~~~f~~~D~d~dg~i~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~  150 (181)
T d1bjfa_          82 IIALSVTSRG------KLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFR  150 (181)
T ss_dssp             HHHHHHHTSS------CHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGGSSHHHHHHHHHH
T ss_pred             HHHHHHHhhh------chHHHHHHHHHHhccCCCCeecHHHHHHHHHHHhhhccccccCCcccccHHHHHHHHHH
Confidence            9988875432      34567899999999999999999999999874             23556677777664

>d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin regulatory subunit (B-chain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=1.3e-11  Score=105.56  Aligned_cols=110  Identities=15%  Similarity=0.232  Sum_probs=84.6

Q ss_pred             hHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHH
Q 009980          401 LAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKL  480 (521)
Q Consensus       401 ~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~  480 (521)
                      .+.++|+.+|+|++|.|+++||..++.... .   ..+..+|+.+|.+++|.|+++||..++......     ....+.+
T Consensus        17 ~l~~~F~~~D~d~~G~I~~~E~~~~~~~~~-~---~~~~~l~~~~d~~~~g~i~~~EFl~~~~~~~~~-----~~~~~~~   87 (165)
T d1auib_          17 RLGKRFKKLDLDNSGSLSVEEFMSLPELQQ-N---PLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVK-----GDKEQKL   87 (165)
T ss_dssp             HHHHHHHHHCTTCCSEECHHHHTTSHHHHT-C---TTHHHHHHHHCTTCSSSEEHHHHHHHHGGGCTT-----CCHHHHH
T ss_pred             HHHHHHHHHCCCCCCCCcHHHHHHhhhccC-C---HHHHHHHHHHccccchhhhhhhhhhhccccccc-----hhhHHHH
Confidence            456789999999999999999976544322 2   235678999999999999999999998775332     1234578


Q ss_pred             HHHHHHhcCCCCcceeHHHHHHHHhc--CccH----HHHHHHhhh
Q 009980          481 DEIFDLMDANNDGKVTFDEFRAAMQR--DSSL----QDVVLSSLR  519 (521)
Q Consensus       481 ~~~f~~~D~~~dG~I~~~Ef~~~~~~--~~~~----~~~~~~~~~  519 (521)
                      ..+|+.+|.|++|.|+.+|+..+++.  ++.+    ++..++.++
T Consensus        88 ~~~f~~~d~d~~g~Is~~el~~~l~~~~~~~~~~~~~~~~~~~~~  132 (165)
T d1auib_          88 RFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTI  132 (165)
T ss_dssp             HHHHHHHCTTCSSEECHHHHHHHHHHHHTTSSCHHHHHHHHHHHH
T ss_pred             HHHHHHhcccccccccHHHHHHHHHHhccccCchHHHHHHHHHHH
Confidence            99999999999999999999999876  4433    344444444

>d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=8.5e-12  Score=109.10  Aligned_cols=97  Identities=23%  Similarity=0.308  Sum_probs=82.7

Q ss_pred             HHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhcc------------CCCc
Q 009980          368 RIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLR------------KSQG  434 (521)
Q Consensus       368 ~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~------------~~~~  434 (521)
                      ..+|+.+|.+++| |+..||..++..+......+.+..+|+.+|.|++|.|+.+|+..++....            ....
T Consensus        63 ~~if~~~d~~~dg~I~~~EF~~~l~~~~~~~~~e~l~~~F~~~D~d~dG~i~~~El~~~~~~~~~~~~~~~~~~~~~~~~  142 (187)
T d1g8ia_          63 TFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTP  142 (187)
T ss_dssp             HHHHHHHCTTCSSEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHHC-----CCGGGSSH
T ss_pred             HHHHHHhCcCCCCCCcHHHHHHHHHHhccCchhhhHHHHHHHHhcCCCCeEcHHHHHHHHHHHhhhhcccccCchhhccH
Confidence            5579999999999 99999999988775555566789999999999999999999998876431            1233


Q ss_pred             HHHHHHHhHhhccCCCcceeHHHHHHHHHh
Q 009980          435 DDALRLCFQMYDIDRSGCITKEEVASMLRA  464 (521)
Q Consensus       435 ~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~  464 (521)
                      ++.+..+|+.+|.|+||+|+++||.+++..
T Consensus       143 ~~~v~~if~~~D~d~dG~Is~~EF~~~~~~  172 (187)
T d1g8ia_         143 EKRVDRIFAMMDKNADGKLTLQEFQEGSKA  172 (187)
T ss_dssp             HHHHHHHHHHHCSSCSSEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence            467889999999999999999999999875

>d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

Probab=99.24  E-value=6.1e-13  Score=99.93  Aligned_cols=70  Identities=26%  Similarity=0.395  Sum_probs=51.4

Q ss_pred             CCCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHH
Q 009980          357 HDLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGF  426 (521)
Q Consensus       357 ~~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~  426 (521)
                      ..++++++..++.+|+.+|.|++| |+..||..+|+.+|..++..++.++|+.+|.|++|.|+|+||+.++
T Consensus        15 ~~l~~~~i~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~s~~e~~~l~~~~D~d~~g~I~~~EFl~am   85 (87)
T d1s6ja_          15 ERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAAT   85 (87)
T ss_dssp             SSSCSSSTTTTTTHHHHHCTTCSSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHHCTTCSSEECHHHHTTCC
T ss_pred             hhCCHHHHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCeEeHHHHHHHH
Confidence            346666666777777777777777 7777777777777777777777777777777777777777776543

>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin-related protein T21P5.17
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.24  E-value=1.3e-11  Score=87.64  Aligned_cols=63  Identities=24%  Similarity=0.414  Sum_probs=42.9

Q ss_pred             HHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHh
Q 009980          402 APRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRA  464 (521)
Q Consensus       402 ~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~  464 (521)
                      ++++|+.+|.|++|.|+..||..++..++...+++++..+|+.+|.|++|.|+++||..++..
T Consensus         3 ~r~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~~i~~~~~~~D~d~dg~I~~~EF~~~m~~   65 (67)
T d1tiza_           3 AKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEK   65 (67)
T ss_dssp             HHHHHHHHCTTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred             HHHHHHHHCCCCcCcCcHHHHHHHHHHhccccchHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            456667777777777777777766666666666666777777777777777777777666654

>d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.23  E-value=9.6e-12  Score=87.72  Aligned_cols=61  Identities=21%  Similarity=0.334  Sum_probs=30.5

Q ss_pred             chHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHH
Q 009980          400 PLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVAS  460 (521)
Q Consensus       400 ~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~  460 (521)
                      ++++++|+.+|+|++|.|+.+||..++..++...++.++..+|+.+|.|++|.|+++||.+
T Consensus         3 eel~~aF~~fD~d~~G~I~~~el~~~l~~lg~~~~~~e~~~l~~~~D~d~~g~I~~~eF~~   63 (65)
T d1fw4a_           3 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ   63 (65)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTCSSSEEHHHHHH
T ss_pred             HHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCcEeHHHHHH
Confidence            3444455555555555555555555554444444444555555555555555555555544

>d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]

Probab=99.21  E-value=1.4e-11  Score=91.12  Aligned_cols=63  Identities=25%  Similarity=0.260  Sum_probs=46.5

Q ss_pred             HHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhh
Q 009980          366 NLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSS  428 (521)
Q Consensus       366 ~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~  428 (521)
                      +|+.+|..+|.|++| |+..||..+++.+|...+..++..+|+.+|.|+||.|+|+||+.++..
T Consensus        16 ~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~ev~~~~~~~D~d~dg~I~~~EF~~~m~~   79 (81)
T d1fi5a_          16 ELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG   79 (81)
T ss_dssp             HHHHHHHHHCSSCSSEECHHHHHHHHHTSSSCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHSC
T ss_pred             HHHHHHHHHcCCCCCcccHHHHHHHHHhcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence            466677777777777 777777777777777777777777777777777777777777776653

>d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.20  E-value=2.6e-11  Score=88.10  Aligned_cols=63  Identities=21%  Similarity=0.293  Sum_probs=30.9

Q ss_pred             hHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHH
Q 009980          401 LAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLR  463 (521)
Q Consensus       401 ~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~  463 (521)
                      ++.++|+.||.|++|.|+..||..++..++...+++++..+|+.+|.|++|.|+++||..++.
T Consensus        10 el~~~F~~fD~~~~G~I~~~el~~~l~~lg~~~~~~e~~~~~~~~D~d~dg~I~~~EF~~~m~   72 (75)
T d1jc2a_          10 ELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMME   72 (75)
T ss_dssp             HHHHHHHHHCCSTTSSEEHHHHHHHHHHSSSCCCHHHHHHHHHHHCSSSCSEECHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCcCeEcHHHHHHHHHhcCCCccHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence            444444445555555555555554444444444444455555555555555555555544443

>d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.18  E-value=1.5e-11  Score=89.75  Aligned_cols=69  Identities=28%  Similarity=0.532  Sum_probs=57.8

Q ss_pred             cHHHHHHHhHhhccC--CCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          434 GDDALRLCFQMYDID--RSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       434 ~~~~l~~~f~~~D~d--~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      +.++++.+|+.||.+  ++|+|+.+||..++..++....    .++.++..+|+.+|.|+||.|+|+||+.+|.+
T Consensus         3 s~eel~~~F~~fd~~~~~~G~I~~~El~~~l~~lg~~~~----~~~~ei~~~~~~~D~d~dG~I~f~EF~~~m~~   73 (76)
T d1qx2a_           3 SPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLL----KGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKK   73 (76)
T ss_dssp             CHHHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGGSC----TTSCSHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHcccCCCCCEECHHHHHHHHHHhCCcCC----CCHHHHHHHHHHhhcCCCCcCcHHHHHHHHHH
Confidence            567899999999764  5799999999999998765421    22347999999999999999999999999875

>d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=99.18  E-value=7.4e-11  Score=92.55  Aligned_cols=99  Identities=15%  Similarity=0.267  Sum_probs=77.4

Q ss_pred             CCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhcc---CCCc
Q 009980          359 LNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLR---KSQG  434 (521)
Q Consensus       359 ~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~---~~~~  434 (521)
                      ++.+++.++   +..++.  +| |+..||..++....  .+.+.++.+|+.+|.|++|.|+.+||..++..++   ...+
T Consensus         6 ~~~~~i~~~---~~~~~~--~~~i~f~eF~~~~~~~~--~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~~~~   78 (109)
T d1rwya_           6 LSAEDIKKA---IGAFTA--ADSFDHKKFFQMVGLKK--KSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLS   78 (109)
T ss_dssp             SCHHHHHHH---HHTTCS--TTCCCHHHHHHHHTGGG--SCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCCC
T ss_pred             cCHHHHHHH---HHhccc--CCCcCHHHHHHHHcccc--CCHHHHHHHhhcccCCCCCcCcHHHHHHHHHHhccccccCC
Confidence            345555444   444433  35 99999877764322  2356889999999999999999999999998764   3467


Q ss_pred             HHHHHHHhHhhccCCCcceeHHHHHHHHHh
Q 009980          435 DDALRLCFQMYDIDRSGCITKEEVASMLRA  464 (521)
Q Consensus       435 ~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~  464 (521)
                      ++++..+|+.+|.|+||.|+++||..++..
T Consensus        79 ~~e~~~~~~~~D~d~dG~i~~~EF~~~m~~  108 (109)
T d1rwya_          79 AKETKTLMAAGDKDGDGKIGVEEFSTLVAE  108 (109)
T ss_dssp             HHHHHHHHHHHCTTCSSSEEHHHHHHHHHT
T ss_pred             HHHHHHHHHHhCCCCCCeEeHHHHHHHHHh
Confidence            889999999999999999999999998864

>d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.17  E-value=1.3e-11  Score=85.81  Aligned_cols=58  Identities=7%  Similarity=0.227  Sum_probs=32.7

Q ss_pred             HHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHH
Q 009980          366 NLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREIL  423 (521)
Q Consensus       366 ~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~  423 (521)
                      +++++|+.+|++++| |+..||+.+|+.+|...+..++..+|+.+|.|++|.|+|+||+
T Consensus         2 el~~aF~~fD~~~~G~I~~~el~~~l~~~g~~~~~~ei~~l~~~~D~d~dg~I~~~eFl   60 (61)
T d2fcea1           2 DFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFI   60 (61)
T ss_dssp             HHHHHHHHHCTTCCSCEEHHHHHHHHHHTTCCCCHHHHHHHHTTCCCCTTSEECHHHHH
T ss_pred             hHHHHHHHHCCCCCCeEeHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcEeHHHhc
Confidence            345555555555555 5555555555555555555555555555555555555555554

>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Caltractin (centrin 2)
species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]

Probab=99.17  E-value=3.1e-11  Score=88.41  Aligned_cols=63  Identities=17%  Similarity=0.338  Sum_probs=33.8

Q ss_pred             hHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHH
Q 009980          401 LAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLR  463 (521)
Q Consensus       401 ~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~  463 (521)
                      +++++|+.+|.|++|.|+.+||..++..++...+.+++..+|+.+|.|++|.|+++||..++.
T Consensus        10 ~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~~~~~~D~d~~G~I~~~EF~~~m~   72 (77)
T d1oqpa_          10 EILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMK   72 (77)
T ss_dssp             HHHHHHHHHCTTCSSSEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCCSSSSEECHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCCCEechHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence            444555555555555555555555555555555555555555555555555555555555544

>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

Probab=99.14  E-value=9.5e-11  Score=91.38  Aligned_cols=99  Identities=16%  Similarity=0.251  Sum_probs=79.0

Q ss_pred             CCHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhcc---CCCcH
Q 009980          359 LNEEEIQNLRIHFRTICANGDNATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLR---KSQGD  435 (521)
Q Consensus       359 ~~~~~~~~l~~~F~~~D~~~~gi~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~---~~~~~  435 (521)
                      +++.++..+   +..++.++ .|+..||...+....  .+.++++.+|+.+|.|++|.|+..||..++..++   ...++
T Consensus         5 ls~~di~~~---~~~~~~~g-si~~~eF~~~~~l~~--~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l~~~~~~~~~   78 (107)
T d2pvba_           5 LKDADVAAA---LAACSAAD-SFKHKEFFAKVGLAS--KSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTD   78 (107)
T ss_dssp             SCHHHHHHH---HHHTCSTT-CCCHHHHHHHHTGGG--SCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCCH
T ss_pred             CCHHHHHHH---HHhccCCC-CcCHHHHHHHHhccc--CCHHHHHHHHHhhccCCCCcCcHHHHHHHHHHhhcccccCCH
Confidence            566666544   55555443 299999877665322  2456899999999999999999999999988864   34688


Q ss_pred             HHHHHHhHhhccCCCcceeHHHHHHHHH
Q 009980          436 DALRLCFQMYDIDRSGCITKEEVASMLR  463 (521)
Q Consensus       436 ~~l~~~f~~~D~d~~G~I~~~e~~~~l~  463 (521)
                      +.++.+|+.+|.|++|.|+++||..+++
T Consensus        79 ~~~~~l~~~~D~d~dG~I~~~EF~~~m~  106 (107)
T d2pvba_          79 AETKAFLADGDKDGDGMIGVDEFAAMIK  106 (107)
T ss_dssp             HHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence            8999999999999999999999998875

>d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Oncomodulin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.14  E-value=1.1e-10  Score=91.29  Aligned_cols=98  Identities=17%  Similarity=0.240  Sum_probs=75.1

Q ss_pred             CCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhcc---CCCc
Q 009980          359 LNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLR---KSQG  434 (521)
Q Consensus       359 ~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~---~~~~  434 (521)
                      ++.+++..+   ...++  .+| ++..+|...+..-  ..+.+.++++|+.+|.|++|.|+++||..++..++   ...+
T Consensus         6 ls~~dI~~~---l~~~~--~~~s~~~~~F~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~~l~   78 (108)
T d1rroa_           6 LSAEDIAAA---LQECQ--DPDTFEPQKFFQTSGLS--KMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELT   78 (108)
T ss_dssp             SCHHHHHHH---HHHTC--STTCCCHHHHHHHHSGG--GSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCCCC
T ss_pred             CCHHHHHHH---HHhcc--cCCCccHHHHHHHHccC--cCCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHHHhccCCCC
Confidence            455555554   33333  445 8888885544321  12346789999999999999999999999988753   4467


Q ss_pred             HHHHHHHhHhhccCCCcceeHHHHHHHHH
Q 009980          435 DDALRLCFQMYDIDRSGCITKEEVASMLR  463 (521)
Q Consensus       435 ~~~l~~~f~~~D~d~~G~I~~~e~~~~l~  463 (521)
                      +++++.+|+.+|.|+||.|+++||..++.
T Consensus        79 ~~~~~~~~~~~D~d~dG~I~~~EF~~~m~  107 (108)
T d1rroa_          79 ESETKSLMDAADNDGDGKIGADEFQEMVH  107 (108)
T ss_dssp             HHHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred             HHHHHHHHHHhCCCCCCeEeHHHHHHHHc
Confidence            88999999999999999999999998874

>d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin B-like protein 2
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.14  E-value=1.4e-10  Score=100.76  Aligned_cols=97  Identities=19%  Similarity=0.284  Sum_probs=78.6

Q ss_pred             HHHHHHHcCC--CCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHH
Q 009980          403 PRIFDLFDNN--RDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKL  480 (521)
Q Consensus       403 ~~~f~~~D~~--~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~  480 (521)
                      .+.|..+|.+  ++|.|+.+||..++...+.... ..+..+|+.+|.|++|.|+++||...+......     ...++.+
T Consensus        20 ~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~~-~~~~~lf~~~d~~~dg~I~f~EFl~~l~~~~~~-----~~~~~~~   93 (183)
T d2zfda1          20 YELFKKISSAVIDDGLINKEEFQLALFKTNKKES-LFADRVFDLFDTKHNGILGFEEFARALSVFHPN-----APIDDKI   93 (183)
T ss_dssp             HHHHHHHHTSSSCSSSBCHHHHHHHHHSCSSCCC-HHHHHHHHHHCSSCSSSBCHHHHHHHHHHTSTT-----SCHHHHH
T ss_pred             HHHHHHHCcCCCCCCcCcHHHHHHHHHhcCCCCC-HHHHHHHHHHccCCCCcCcHHHHHHHHHhhhcc-----CcHHHHH
Confidence            4566666765  6999999999988876654433 457899999999999999999999988765432     1235578


Q ss_pred             HHHHHHhcCCCCcceeHHHHHHHHh
Q 009980          481 DEIFDLMDANNDGKVTFDEFRAAMQ  505 (521)
Q Consensus       481 ~~~f~~~D~~~dG~I~~~Ef~~~~~  505 (521)
                      ..+|+.+|.|++|.|+.+|+..++.
T Consensus        94 ~~~F~~~D~d~~G~Is~~e~~~~~~  118 (183)
T d2zfda1          94 HFSFQLYDLKQQGFIERQEVKQMVV  118 (183)
T ss_dssp             HHHHHHHCTTSSSSEEHHHHHHHHH
T ss_pred             HHhhcccccCCCCCccHHHHHHHHH
Confidence            8999999999999999999999875

>d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium vector protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=99.12  E-value=3.9e-11  Score=85.20  Aligned_cols=62  Identities=24%  Similarity=0.364  Sum_probs=30.9

Q ss_pred             hHHHHHHHHcCCCCcceeHHHHHHHHhhccCC-CcHHHHHHHhHhhccCCCcceeHHHHHHHH
Q 009980          401 LAPRIFDLFDNNRDGTVDMREILCGFSSLRKS-QGDDALRLCFQMYDIDRSGCITKEEVASML  462 (521)
Q Consensus       401 ~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~-~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l  462 (521)
                      ++.++|+.+|.+++|.|+.+||..++..++.. .+++++..+|+.+|.|++|.|+++||..++
T Consensus         3 el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~s~~e~~~~~~~~D~d~dG~i~~~EF~~~m   65 (68)
T d1c7va_           3 EILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLI   65 (68)
T ss_dssp             HHHHHHHHHSCSGGGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHH
T ss_pred             HHHHHHHHHcCCCcCeEcHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHH
Confidence            34445555555555555555555555444432 344455555555555555555555555444

>d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Kchip1, Kv4 potassium channel-interacting protein
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.12  E-value=8.1e-11  Score=101.82  Aligned_cols=103  Identities=18%  Similarity=0.262  Sum_probs=84.2

Q ss_pred             CcchHHHHHHHH-cCCCCcceeHHHHHHHHhhccCCC-cHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCC
Q 009980          398 LVPLAPRIFDLF-DNNRDGTVDMREILCGFSSLRKSQ-GDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDIT  475 (521)
Q Consensus       398 ~~~~~~~~f~~~-D~~~~g~I~~~ef~~~~~~~~~~~-~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~  475 (521)
                      +..++..+++.| +.+++|.|+.+||..++....... +...+..+|+.+|.|++|.|+++||..++..+...      .
T Consensus        11 t~~ei~~l~~~F~~~~~~G~is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~~~~g~I~~~EFl~~~~~~~~~------~   84 (178)
T d1s6ca_          11 TKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRG------T   84 (178)
T ss_dssp             CHHHHHHHHHHHHHHCTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHC------C
T ss_pred             CHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHhCCCCCHHHHHHHHHHHHCCCCCCcccHHHHHHHHHHHhcc------c
Confidence            456777777776 667899999999999998765543 44556899999999999999999998888654322      3


Q ss_pred             ChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          476 EPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       476 ~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      .++.+..+|+.+|.|++|.|+++|+..++..
T Consensus        85 ~~~~~~~~f~~~D~~~~g~i~~~e~~~~~~~  115 (178)
T d1s6ca_          85 VHEKLRWTFNLYDINKDGYINKEEMMDIVKA  115 (178)
T ss_dssp             HHHHHHHHHHHHCTTCSSCEEHHHHHHHHHH
T ss_pred             hHHHHHHHHHhhccCCCCeecHHHHHHHHHH
Confidence            4568899999999999999999999887653

>d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium- and integrin-binding protein, CIB
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.10  E-value=9.6e-11  Score=101.27  Aligned_cols=97  Identities=18%  Similarity=0.294  Sum_probs=79.2

Q ss_pred             HHHHHhhhcC-CCC-CCHHHHHHHHHhcC-CCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhcc-----CCCc----H
Q 009980          368 RIHFRTICAN-GDN-ATLSEFEEVLKAMN-MSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLR-----KSQG----D  435 (521)
Q Consensus       368 ~~~F~~~D~~-~~g-i~~~el~~~l~~~~-~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~-----~~~~----~  435 (521)
                      .++|+.+|.+ ++| |+..||..++..+. .....+.++.+|+.+|.|++|.|+.+|+..++..+.     ...+    +
T Consensus        60 ~rif~~fd~~~~~g~I~f~EFv~~l~~~~~~~~~~~kl~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~  139 (180)
T d1xo5a_          60 ERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMK  139 (180)
T ss_dssp             HHHHHHHCCSTTCCEECHHHHHHHHHHHSTTSCHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHC------CCCCTTHH
T ss_pred             HHHHHhccCCCCCCcCcHHHHHHHHHHHhhcCCHHHHHHHhhccccCCCCCeeeHHHHHHHHHHHHhccccccccHHHHH
Confidence            5679999987 688 99999999987764 334456789999999999999999999999887642     1222    2


Q ss_pred             HHHHHHhHhhccCCCcceeHHHHHHHHHh
Q 009980          436 DALRLCFQMYDIDRSGCITKEEVASMLRA  464 (521)
Q Consensus       436 ~~l~~~f~~~D~d~~G~I~~~e~~~~l~~  464 (521)
                      +.+..+|+.+|.|++|.||++||..++..
T Consensus       140 ~~v~~~~~~~D~d~dG~Is~~EF~~~~~~  168 (180)
T d1xo5a_         140 QLIDNILEESDIDRDGTINLSEFQHVISR  168 (180)
T ss_dssp             HHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence            34667899999999999999999999885

>d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: DJ-1-binding protein, DJBP
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.10  E-value=6.3e-11  Score=88.15  Aligned_cols=64  Identities=17%  Similarity=0.361  Sum_probs=59.3

Q ss_pred             HHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHH
Q 009980          435 DDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAM  504 (521)
Q Consensus       435 ~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~  504 (521)
                      ...+..+|+.+|.+++|+|+.+||+.++..++..      ++++++..+|..+|.|++|.|+|.||...+
T Consensus        19 ~~~l~~~F~~~D~~~~G~i~~~ef~~~l~~~~~~------l~~~e~~~l~~~~d~~~~g~I~y~eFl~~f   82 (83)
T d1wlza1          19 YHAITQEFENFDTMKTNTISREEFRAICNRRVQI------LTDEQFDRLWNEMPVNAKGRLKYPDFLSRF   82 (83)
T ss_dssp             HHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHTCC------CCHHHHHHHHTTSCBCTTSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCceEChhHHHHHHHHhCCC------CChhHHHHHhhccccCCCCcEeHHHHHHHh
Confidence            4568899999999999999999999999988765      788899999999999999999999999876

>d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]

Probab=99.05  E-value=2.2e-10  Score=86.84  Aligned_cols=70  Identities=24%  Similarity=0.388  Sum_probs=58.0

Q ss_pred             HHHHHHhHhh-ccCCC-cceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          436 DALRLCFQMY-DIDRS-GCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       436 ~~l~~~f~~~-D~d~~-G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      +.+..+|..| |+||+ |+|+.+||+.++.......... ..+++.+..+|+.+|.|+||.|+|+||..+|..
T Consensus         9 ~~l~~~F~~y~d~dg~~G~is~~El~~~L~~~~~~~~~~-~~~~~~~~~~~~~~D~d~dG~Idf~EF~~lm~~   80 (93)
T d1zfsa1           9 ETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDV-QKDADAVDKIMKELDENGDGEVDFQEFVVLVAA   80 (93)
T ss_dssp             HHHHHHHHHHGGGSSCCSSEEHHHHHHHHHHHSTTTSCC-SSCHHHHHHHHHHHTTTCCSEECSHHHHHHHHH
T ss_pred             HHHHHHHHHHcccCCCCCEecHHHHHHHHHHhccccccc-CCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHH
Confidence            4688899988 88875 9999999999998865432222 246678999999999999999999999999865

>d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.04  E-value=1.4e-10  Score=88.45  Aligned_cols=67  Identities=16%  Similarity=0.203  Sum_probs=59.7

Q ss_pred             CCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHh
Q 009980          359 LNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFS  427 (521)
Q Consensus       359 ~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~  427 (521)
                      +++++.+++.++|+.+|.|++| |+.+|+..++...+.  +.+.+.++|+.+|.|+||.|+++||+.+|.
T Consensus         4 lt~~e~~~~~~~F~~~D~d~~G~is~~e~~~~l~~~~l--~~~~l~~i~~~~D~d~dG~l~~~EF~~am~   71 (95)
T d1c07a_           4 VSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTGL--PSTLLAHIWSLCDTKDCGKLSKDQFALAFH   71 (95)
T ss_dssp             SCSHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHTTTC--CHHHHHHHHHHHCTTCSSSEETTTHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHhcCC--CHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence            6888999999999999999999 999999999988764  467889999999999999999999988764

>d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Nucleobindin 1 (CALNUC)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=1.7e-10  Score=88.85  Aligned_cols=70  Identities=21%  Similarity=0.349  Sum_probs=46.6

Q ss_pred             HHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCC----------CCChhHHHHHHHHhcCCCCcceeHHHHHHHHhcC
Q 009980          438 LRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVD----------ITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRD  507 (521)
Q Consensus       438 l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~----------~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~~  507 (521)
                      ++.+|+.+|.|++|+|+.+||..++..+........          ...+..+..+|+.+|.|+||.||++||.+++++.
T Consensus        18 ~r~~F~~~D~DgdG~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~D~d~DG~Is~~EF~~~~~~~   97 (99)
T d1snla_          18 PKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLASTQRK   97 (99)
T ss_dssp             HHHHHHHHCSSCCSEEEHHHHHHHHHHHHHTTSCCSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHHHHHHHHHCC
T ss_pred             HHHHHHHHCCCCCCcCCHHHHHHHHHHHHHhcchhhhhhhhhhhhHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHhcC
Confidence            556677777777777777777666654211100000          0112357889999999999999999999998764

>d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Reps1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.01  E-value=2.8e-10  Score=86.13  Aligned_cols=68  Identities=21%  Similarity=0.311  Sum_probs=61.1

Q ss_pred             CCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhh
Q 009980          359 LNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSS  428 (521)
Q Consensus       359 ~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~  428 (521)
                      ++++++..++.+|+.+|.|++| |+.+|+..++...+.  +..++..+++.+|.|++|.|+++||+.++.-
T Consensus         3 ls~ee~~~y~~~F~~~D~d~~G~i~~~e~~~~l~~~~l--~~~~l~~i~~~~D~d~dG~l~~~EF~~a~~l   71 (92)
T d1fi6a_           3 ITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSKL--PILELSHIWELSDFDKDGALTLDEFCAAFHL   71 (92)
T ss_dssp             CCHHHHHHHHHHHTTTCCSTTCEEEHHHHHHHHHHHSS--CHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHhCCCcccchhHHHHHHHHHHccC--CHHHHHHHHHHhCCCCCCeecHHHHHHHHHH
Confidence            6889999999999999999999 999999999998765  4578999999999999999999999877653

>d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.99  E-value=4e-10  Score=82.00  Aligned_cols=65  Identities=22%  Similarity=0.370  Sum_probs=51.3

Q ss_pred             HHHHHHHHhhhcC--CCC-CCHHHHHHHHHhcCCCCC--cchHHHHHHHHcCCCCcceeHHHHHHHHhhc
Q 009980          365 QNLRIHFRTICAN--GDN-ATLSEFEEVLKAMNMSSL--VPLAPRIFDLFDNNRDGTVDMREILCGFSSL  429 (521)
Q Consensus       365 ~~l~~~F~~~D~~--~~g-i~~~el~~~l~~~~~~~~--~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~  429 (521)
                      ++++.+|+.||.+  ++| |+.+||+.+|+.+|...+  ..++.++++.+|.|+||.|+|+||+.++..+
T Consensus         5 eel~~~F~~fd~~~~~~G~I~~~El~~~l~~lg~~~~~~~~ei~~~~~~~D~d~dG~I~f~EF~~~m~~~   74 (76)
T d1qx2a_           5 EEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKKI   74 (76)
T ss_dssp             HHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcccCCCCCEECHHHHHHHHHHhCCcCCCCHHHHHHHHHHhhcCCCCcCcHHHHHHHHHHH
Confidence            4567788888654  357 999999999998876554  4578899999999999999999998887643

>d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.98  E-value=3.9e-10  Score=85.85  Aligned_cols=62  Identities=24%  Similarity=0.312  Sum_probs=55.7

Q ss_pred             HHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHh
Q 009980          436 DALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQ  505 (521)
Q Consensus       436 ~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~  505 (521)
                      ..++.+|+.+|+|++|+|+.+|+..++...+        ++.+++..+++.+|.|+||+|+++||..+|.
T Consensus        10 ~~~~~~F~~~D~d~~G~is~~e~~~~l~~~~--------l~~~~l~~i~~~~D~d~dG~l~~~EF~~am~   71 (95)
T d1c07a_          10 AKYDEIFLKTDKDMDGFVSGLEVREIFLKTG--------LPSTLLAHIWSLCDTKDCGKLSKDQFALAFH   71 (95)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHHTTT--------CCHHHHHHHHHHHCTTCSSSEETTTHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCCCcHHHHHHHHHhcC--------CCHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence            5678899999999999999999999998754        4667899999999999999999999988764

>d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: DJ-1-binding protein, DJBP
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.98  E-value=2.9e-10  Score=84.45  Aligned_cols=62  Identities=15%  Similarity=0.198  Sum_probs=52.5

Q ss_pred             HHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHH
Q 009980          365 QNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGF  426 (521)
Q Consensus       365 ~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~  426 (521)
                      ..+.++|+.+|.+++| |+..||..+|..++...+.+++..+|..+|.|++|.|+|.||+..+
T Consensus        20 ~~l~~~F~~~D~~~~G~i~~~ef~~~l~~~~~~l~~~e~~~l~~~~d~~~~g~I~y~eFl~~f   82 (83)
T d1wlza1          20 HAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLSRF   82 (83)
T ss_dssp             HHHHHHHHHHCTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTTSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCceEChhHHHHHHHHhCCCCChhHHHHHhhccccCCCCcEeHHHHHHHh
Confidence            4577788888888888 8888888888888888888888888888888888888888888765

>d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.98  E-value=2.9e-10  Score=82.91  Aligned_cols=70  Identities=27%  Similarity=0.560  Sum_probs=56.5

Q ss_pred             CcHHHHHHHhHhhcc--CCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          433 QGDDALRLCFQMYDI--DRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       433 ~~~~~l~~~f~~~D~--d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      ...++++.+|..||.  +++|+|+.+||+.++....+..    ..++++++.+++.+|.|+||.|+|+||..+|..
T Consensus         4 ~~~~~l~~~F~~y~~~d~~~g~is~~Elk~ll~~~~~~~----~~~~~~v~~~~~~~D~d~dG~Idf~EF~~l~~~   75 (78)
T d1cb1a_           4 KSPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSL----LKGPRTLDDLFQELDKNGDGEVSFEEFQVLVKK   75 (78)
T ss_dssp             CCHHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSC----CSSCCCSSHHHHHTCCCSSSSEEHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHccCCCCCCEECHHHHHHHHHHHcCCC----CCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence            345789999999975  3468999999999998864321    123446889999999999999999999999864

>d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a3 [TaxId: 9606]

Probab=98.98  E-value=6.3e-10  Score=83.62  Aligned_cols=70  Identities=19%  Similarity=0.272  Sum_probs=57.3

Q ss_pred             HHHHHHhHhh-ccCCCc-ceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          436 DALRLCFQMY-DIDRSG-CITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       436 ~~l~~~f~~~-D~d~~G-~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      +.+..+|..| |++|+| .|+.+||+.++.......... ...+..+..+++.+|.|+||.|+|+||+.+|..
T Consensus         9 ~~i~~vF~kya~~dGd~~~ls~~Elk~ll~~~~~~~~~~-~~~~~~~~~~~~~lD~n~Dg~IdF~EF~~l~~~   80 (93)
T d1ksoa_           9 AAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPT-EFRECDYNKFMSVLDTNKDCEVDFVEYVRSLAC   80 (93)
T ss_dssp             HHHHHHHHHHHTSSSCTTCEEHHHHHHHHHHHTTTCCCC-TTCHHHHHHHHHHHHHTTTCEECHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCcCCCCCeECHHHHHHHHHHhhhccccc-CCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHH
Confidence            3567789887 999999 599999999998754432222 245678999999999999999999999998875

>d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]

Probab=98.95  E-value=1.3e-10  Score=87.60  Aligned_cols=69  Identities=25%  Similarity=0.421  Sum_probs=55.2

Q ss_pred             HHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          436 DALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       436 ~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      +.+..+|..||.| +|+|+.+||..++....+..... ..++..++.+|+.+|.|+||+|+|+||..+|..
T Consensus         9 e~l~~~F~~yd~d-dG~is~~El~~~l~~~~~~~~~~-~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~   77 (92)
T d1a4pa_           9 ETMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLEN-QKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAG   77 (92)
T ss_dssp             HHHHHHHHHHHGG-GCSBCHHHHHHHHHHHCHHHHHH-SCCTTHHHHHHHHHCTTSSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCC-CCEEcHHHHHHHHHHhccccccc-cCCHHHHHHHHHHHhCCCCCCCcHHHHHHHHHH
Confidence            4688999999987 89999999999997643211111 134558999999999999999999999999865

>d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]

Probab=98.93  E-value=8.6e-10  Score=82.97  Aligned_cols=67  Identities=13%  Similarity=0.267  Sum_probs=57.1

Q ss_pred             HHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhc-----CCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhc
Q 009980          362 EEIQNLRIHFRTICANGDN-ATLSEFEEVLKAM-----NMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSL  429 (521)
Q Consensus       362 ~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~-----~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~  429 (521)
                      ..+..+..+|..+|.| +| |+.+||..+|+..     +...+.+.+.++|+.+|.|+||.|+|+||..++..+
T Consensus         6 ~~ie~l~~~F~~yd~d-dG~is~~El~~~l~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~l   78 (92)
T d1a4pa_           6 HAMETMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGL   78 (92)
T ss_dssp             HHHHHHHHHHHHHHGG-GCSBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHCTTSSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCC-CCEEcHHHHHHHHHHhccccccccCCHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHH
Confidence            4578899999999987 68 9999999999863     344566789999999999999999999999887654

>d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a13 [TaxId: 9606]

Probab=98.92  E-value=9.3e-10  Score=83.85  Aligned_cols=67  Identities=18%  Similarity=0.369  Sum_probs=54.8

Q ss_pred             HHHHHHhHhh-ccCCC-cceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          436 DALRLCFQMY-DIDRS-GCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       436 ~~l~~~f~~~-D~d~~-G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      +.+..+|..| |.||+ |+|+.+||+.++...++...    .+++.++.+|+.+|.|+||.|+|+||..+|..
T Consensus        14 ~~l~~vF~~y~d~dg~~g~is~~El~~~l~~~~~~~~----~~~~~v~~l~~~~D~d~DG~IdF~EF~~l~~~   82 (98)
T d1yuta1          14 ETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLL----KDVGSLDEKMKSLDVNQDSELKFNEYWRLIGE   82 (98)
T ss_dssp             HHHHHHHHHHHTTSSSSSCBCHHHHHHHHHHHCTTTT----CCSSCHHHHHHHHCTTCCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHcccCCCCCEEcHHHHHHHHHHhccccC----CCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence            3577888887 77775 99999999999987654321    23457999999999999999999999999875

>d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.92  E-value=6e-10  Score=81.17  Aligned_cols=68  Identities=21%  Similarity=0.315  Sum_probs=56.4

Q ss_pred             HHHHHHHHHHHhhhc-CC-CC-CCHHHHHHHHHhc--CCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhc
Q 009980          362 EEIQNLRIHFRTICA-NG-DN-ATLSEFEEVLKAM--NMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSL  429 (521)
Q Consensus       362 ~~~~~l~~~F~~~D~-~~-~g-i~~~el~~~l~~~--~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~  429 (521)
                      +...+++.+|..||. ++ .| |+..||+.+++.+  +...+.+.+.++++.+|.|+||.|+|+||+.++..+
T Consensus         4 ~~~~~l~~~F~~y~~~d~~~g~is~~Elk~ll~~~~~~~~~~~~~v~~~~~~~D~d~dG~Idf~EF~~l~~~l   76 (78)
T d1cb1a_           4 KSPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEFQVLVKKI   76 (78)
T ss_dssp             CCHHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSHHHHHTCCCSSSSEEHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHccCCCCCCEECHHHHHHHHHHHcCCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence            345778999999975 33 46 9999999999987  445566789999999999999999999999988654

>d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Sandworm (Nereis diversicolor) [TaxId: 126592]

Probab=98.92  E-value=8.8e-10  Score=94.69  Aligned_cols=118  Identities=13%  Similarity=0.167  Sum_probs=81.1

Q ss_pred             chHHHHHHHHcCCCCcceeHHHHHHHHhhcc----CC-CcHHH----HHHHhHh--hccCCCcceeHHHHHHHHHhCCCC
Q 009980          400 PLAPRIFDLFDNNRDGTVDMREILCGFSSLR----KS-QGDDA----LRLCFQM--YDIDRSGCITKEEVASMLRALPDD  468 (521)
Q Consensus       400 ~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~----~~-~~~~~----l~~~f~~--~D~d~~G~I~~~e~~~~l~~~~~~  468 (521)
                      ..++.+|+.+|.|+||.|+++||..++..+.    .. .....    ....+..  .|.+++|.|+.+||...+......
T Consensus         6 ~~l~~~F~~~D~d~dG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~~   85 (174)
T d2scpa_           6 QKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVAGGKGIDETTFINSMKEMVKN   85 (174)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHSCCCTTHHHHHHHHHHHHHHHTGGGTTTTSCEEHHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHHccCCCCcEeHHHHHHHHHHHhccccchhHHHHHhHHhhhhhccccccccCCCCcCcHHHHHHHHHhhhcc
Confidence            4678899999999999999999998876542    11 11111    2223333  377889999999999988764332


Q ss_pred             CCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhcCccHHHHHHHhhh
Q 009980          469 CLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDSSLQDVVLSSLR  519 (521)
Q Consensus       469 ~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~~~~~~~~~~~~~~  519 (521)
                      ... .......+..+|+.+|.|+||.|+.+||..+++.. .++.+++..++
T Consensus        86 ~~~-~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~-~~~~~~~~~~f  134 (174)
T d2scpa_          86 PEA-KSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGML-GLDKTMAPASF  134 (174)
T ss_dssp             GGG-THHHHTHHHHHHHHHCTTCSSSEEHHHHHHHHHHT-TCCGGGHHHHH
T ss_pred             hhh-HHHHHHHHHHHHHHHCCCccccCCHHHHHHHHHHH-hhhhHHHHHHH
Confidence            110 00112357889999999999999999999998762 23444555544

>d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a4 [TaxId: 9606]

Probab=98.92  E-value=1.4e-09  Score=81.94  Aligned_cols=70  Identities=20%  Similarity=0.327  Sum_probs=55.0

Q ss_pred             HHHHHHhHhh-ccCCC-cceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          436 DALRLCFQMY-DIDRS-GCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       436 ~~l~~~f~~~-D~d~~-G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      +.+..+|..| |.||+ |+|+.+||+.++......... ...+++.++.+|+.+|.|+||.|+|+||..+|..
T Consensus         9 ~~l~~~F~~ya~~dg~~~~L~~~Elk~~l~~~~~~~~~-~~~~~~~~~~i~~~~D~n~DG~I~F~EF~~lm~~   80 (93)
T d3c1va1           9 DVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLG-KRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSC   80 (93)
T ss_dssp             HHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCHHHHT-TCCSHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHccCCCCCCeeCHHHHHHHHHHhchhccc-cCCCHHHHHHHHHHHcCCCCCCCCHHHHHHHHHH
Confidence            4678899998 66665 479999999999864321111 1256778999999999999999999999999876

>d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Phospholipase C-beta-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.91  E-value=9.2e-11  Score=100.29  Aligned_cols=97  Identities=19%  Similarity=0.184  Sum_probs=71.9

Q ss_pred             hHHHHHHH--HcCCCCcceeHHHHHHHHhhccCCC--cHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCC
Q 009980          401 LAPRIFDL--FDNNRDGTVDMREILCGFSSLRKSQ--GDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITE  476 (521)
Q Consensus       401 ~~~~~f~~--~D~~~~g~I~~~ef~~~~~~~~~~~--~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~  476 (521)
                      .+.++|..  +|.|++|.|+.+|+..++.......  ..+.+..+|...|.+++|.|+++||..++..+.         .
T Consensus         6 ~l~k~~~k~~~d~n~dG~Is~~el~k~l~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~F~eF~~~~~~l~---------~   76 (170)
T d2zkmx1           6 FLDKILVKLKMQLNSEGKIPVKNFFQMFPADRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLC---------P   76 (170)
T ss_dssp             HHHHHHHHHHHSCCTTSCEEHHHHHHHSCSCHHHHHHHHHHTTCCCCTTCEECGGGCCHHHHHHHHHHHS---------C
T ss_pred             HHHHHHHHHhcccCCCCCCcHHHHHHHHHHhhhhHHHHHHHHhhhhccccccCCCccCHHHHHHHHhccC---------C
Confidence            34555554  7999999999999999986543322  234566779999999999999999999998763         2


Q ss_pred             hhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          477 PGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       477 ~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      ..++..+|..+|.|++|.||.+||..+|..
T Consensus        77 r~ei~~~F~~~d~d~~~~it~~el~~fL~~  106 (170)
T d2zkmx1          77 RPEIDEIFTSYHAKAKPYMTKEHLTKFINQ  106 (170)
T ss_dssp             CHHHHTTCC--------CCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCcccHHHHHHHHHH
Confidence            358999999999999999999999999986

>d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Reps1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.90  E-value=1.5e-09  Score=81.93  Aligned_cols=62  Identities=26%  Similarity=0.340  Sum_probs=55.3

Q ss_pred             HHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHh
Q 009980          436 DALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQ  505 (521)
Q Consensus       436 ~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~  505 (521)
                      +.++.+|+.+|.|++|+|+.+|+..++...+        ++.+++..+++.+|.|+||+|+++||..+|.
T Consensus         9 ~~y~~~F~~~D~d~~G~i~~~e~~~~l~~~~--------l~~~~l~~i~~~~D~d~dG~l~~~EF~~a~~   70 (92)
T d1fi6a_           9 QYYVNQFKTIQPDLNGFIPGSAAKEFFTKSK--------LPILELSHIWELSDFDKDGALTLDEFCAAFH   70 (92)
T ss_dssp             HHHHHHHTTTCCSTTCEEEHHHHHHHHHHHS--------SCHHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCcccchhHHHHHHHHHHcc--------CCHHHHHHHHHHhCCCCCCeecHHHHHHHHH
Confidence            4577899999999999999999999998754        4667999999999999999999999987664

>d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a4 [TaxId: 9606]

Probab=98.89  E-value=2.3e-09  Score=80.76  Aligned_cols=68  Identities=22%  Similarity=0.293  Sum_probs=55.9

Q ss_pred             HHHHHHHHHHHhh-hcCCC-C-CCHHHHHHHHHhc-----CCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhc
Q 009980          362 EEIQNLRIHFRTI-CANGD-N-ATLSEFEEVLKAM-----NMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSL  429 (521)
Q Consensus       362 ~~~~~l~~~F~~~-D~~~~-g-i~~~el~~~l~~~-----~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~  429 (521)
                      +.+..+..+|..| |.+|+ | |+.+||+.+|+..     +...+.+.+.++|+.+|.|+||.|+|+||+.++..+
T Consensus         6 ~~i~~l~~~F~~ya~~dg~~~~L~~~Elk~~l~~~~~~~~~~~~~~~~~~~i~~~~D~n~DG~I~F~EF~~lm~~l   81 (93)
T d3c1va1           6 KALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCI   81 (93)
T ss_dssp             HHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCHHHHTTCCSHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHccCCCCCCeeCHHHHHHHHHHhchhccccCCCHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHH
Confidence            4567889999998 55655 4 9999999999873     445567789999999999999999999999987654

>d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a13 [TaxId: 9606]

Probab=98.88  E-value=2.9e-09  Score=81.03  Aligned_cols=68  Identities=21%  Similarity=0.242  Sum_probs=57.6

Q ss_pred             HHHHHHHHHHHhh-hcCCC-C-CCHHHHHHHHHhcCC--CCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhc
Q 009980          362 EEIQNLRIHFRTI-CANGD-N-ATLSEFEEVLKAMNM--SSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSL  429 (521)
Q Consensus       362 ~~~~~l~~~F~~~-D~~~~-g-i~~~el~~~l~~~~~--~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~  429 (521)
                      +.+..+..+|..| |.+|+ | |+..||+.+++..+.  ..+...+.++++.+|.|+||.|+|+||+.++..+
T Consensus        11 ~~i~~l~~vF~~y~d~dg~~g~is~~El~~~l~~~~~~~~~~~~~v~~l~~~~D~d~DG~IdF~EF~~l~~~l   83 (98)
T d1yuta1          11 ESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGEL   83 (98)
T ss_dssp             HHHHHHHHHHHHHHTTSSSSSCBCHHHHHHHHHHHCTTTTCCSSCHHHHHHHHCTTCCSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcccCCCCCEEcHHHHHHHHHHhccccCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence            4577899999998 67775 7 999999999998643  3456679999999999999999999999988654

>d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]

Probab=98.87  E-value=1.9e-09  Score=81.53  Aligned_cols=68  Identities=22%  Similarity=0.326  Sum_probs=56.1

Q ss_pred             HHHHHHHHHHHhh-hcCCC-C-CCHHHHHHHHHhcCC-----CCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhc
Q 009980          362 EEIQNLRIHFRTI-CANGD-N-ATLSEFEEVLKAMNM-----SSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSL  429 (521)
Q Consensus       362 ~~~~~l~~~F~~~-D~~~~-g-i~~~el~~~l~~~~~-----~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~  429 (521)
                      ..+..+.++|..| |.+|+ | |+.+||+.+|+.++.     ..+.+.+.++|+.+|.|+||.|+|+||+.++..+
T Consensus         6 ~~i~~l~~~F~~y~d~dg~~G~is~~El~~~L~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~Idf~EF~~lm~~l   81 (93)
T d1zfsa1           6 TAMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAAL   81 (93)
T ss_dssp             HHHHHHHHHHHHHGGGSSCCSSEEHHHHHHHHHHHSTTTSCCSSCHHHHHHHHHHHTTTCCSEECSHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcccCCCCCEecHHHHHHHHHHhcccccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence            4567889999998 78875 7 999999999988643     3345688999999999999999999999887653

>d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
species: Physarum polycephalum [TaxId: 5791]

Probab=98.86  E-value=5e-10  Score=106.45  Aligned_cols=120  Identities=12%  Similarity=0.143  Sum_probs=89.9

Q ss_pred             hHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHh----------------
Q 009980          401 LAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRA----------------  464 (521)
Q Consensus       401 ~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~----------------  464 (521)
                      .++++|..+|.|++|.|+++||..++...+...+++++..+|..+|.|++|.|++.||..++..                
T Consensus       123 ~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~F~~~d~d~~  202 (321)
T d1ij5a_         123 ILRQLFLSSAVSGSGKFSFQDLKQVLAKYADTIPEGPLKKLFVMVENDTKGRMSYITLVAVANDLAALVADFRKIDTNSN  202 (321)
T ss_dssp             HHHHHHTSSSSTTSSCCCHHHHHHHHHHHHTTSCSSHHHHHHHHHHHCCSSTHHHHHHTTSHHHHHTSCCCHHHHCTTCC
T ss_pred             HHHHHHHHHcCCCCCeEcHHHHHHHHHHcCCcccHHHHHHHHHHHhhcCCccccchhhhhhhhhhhhhhHHHHHHhhccc
Confidence            5678999999999999999999999999888888888999999999999999999888643321                


Q ss_pred             --------------CCCCC-------------CCCCCCC----------hhHHHHHHHHhcCCCCcceeHHHHHHHHhc-
Q 009980          465 --------------LPDDC-------------LPVDITE----------PGKLDEIFDLMDANNDGKVTFDEFRAAMQR-  506 (521)
Q Consensus       465 --------------~~~~~-------------~~~~~~~----------~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~-  506 (521)
                                    .+...             .......          ...+..+|..+|.|++|+|+.+||..++.. 
T Consensus       203 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~  282 (321)
T d1ij5a_         203 GTLSRKEFREHFVRLGFDKKSVQDALFRYADEDESDDVGFSEYVHLGLCLLVLRILYAFADFDKSGQLSKEEVQKVLEDA  282 (321)
T ss_dssp             SEECHHHHHHHHHHTTCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHHHHHHHTCSSSCSSEEHHHHHHHHHHT
T ss_pred             ccchhHHHhhhhhcccccchHHHHHHHHhhhcccccccccccccchhhhhhHHHHHHHHHhcCCCCCCcHHHHHHHHHHc
Confidence                          11000             0000000          011334688899999999999999999987 


Q ss_pred             C-ccHHHHHHHhhhh
Q 009980          507 D-SSLQDVVLSSLRQ  520 (521)
Q Consensus       507 ~-~~~~~~~~~~~~~  520 (521)
                      + +.++++++..|++
T Consensus       283 ~~~~~~~~~~~~l~~  297 (321)
T d1ij5a_         283 HIPESARKKFEHQFS  297 (321)
T ss_dssp             TCCGGGCSTHHHHHH
T ss_pred             CCCcCcHHHHHHHHH
Confidence            3 4688778777764

>d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.86  E-value=2.2e-09  Score=81.44  Aligned_cols=66  Identities=18%  Similarity=0.303  Sum_probs=58.1

Q ss_pred             CCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHh
Q 009980          359 LNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFS  427 (521)
Q Consensus       359 ~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~  427 (521)
                      +++++..+++++|+.+| +++| |+.+|+..+|...|..  ..++..+++.+|.|++|.|+++||+.++.
T Consensus         4 ls~ee~~~y~~~F~~~D-~~~G~i~~~el~~~l~~~gl~--~~~L~~Iw~~~D~~~dG~l~~~EF~~a~~   70 (95)
T d2jxca1           4 VKPEDKAKYDAIFDSLS-PVNGFLSGDKVKPVLLNSKLP--VDILGRVWELSDIDHDGMLDRDEFAVAMF   70 (95)
T ss_dssp             SCHHHHHHHHHHHHHTC-CBTTEEEHHHHHHHHTTSSCC--HHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHhC-CCCCceeHHHHHHHHHHcCCC--HHHHHHHHHHhcCCCCCeEcHHHHHHHHH
Confidence            68899999999999999 7889 9999999999887753  56899999999999999999999987665

>d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=98.84  E-value=2.6e-09  Score=92.60  Aligned_cols=96  Identities=13%  Similarity=0.093  Sum_probs=78.2

Q ss_pred             HHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCC---------CcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHH
Q 009980          367 LRIHFRTICANGDN-ATLSEFEEVLKAMNMSS---------LVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDD  436 (521)
Q Consensus       367 l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~---------~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~  436 (521)
                      +...+...|.+++| |+.+++..++.......         ....+..+|+.+|.|++|.|+.+||..++..++  .+.+
T Consensus        62 ~~~~~~~~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~--l~~~  139 (185)
T d2sasa_          62 WRDLKGRADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQ--LQCA  139 (185)
T ss_dssp             HHHHHHHHCTTCSSCEEHHHHHHHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSC--CCCS
T ss_pred             HHHHHHHhCcCCCCcEeeeHhhHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHccCCCccCCHHHHHHHHHHcC--CCHH
Confidence            34567778999999 99999988876542111         112478899999999999999999999998765  4566


Q ss_pred             HHHHHhHhhccCCCcceeHHHHHHHHHh
Q 009980          437 ALRLCFQMYDIDRSGCITKEEVASMLRA  464 (521)
Q Consensus       437 ~l~~~f~~~D~d~~G~I~~~e~~~~l~~  464 (521)
                      +++.+|+.+|.|++|.|+++||..++..
T Consensus       140 ~~~~~f~~~D~d~dG~i~~~EF~~~~~~  167 (185)
T d2sasa_         140 DVPAVYNVITDGGKVTFDLNRYKELYYR  167 (185)
T ss_dssp             SHHHHHHHHHTTTTSCCSHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCCCCCCcHHHHHHHHHH
Confidence            7999999999999999999999988865

>d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a6 [TaxId: 9606]

Probab=98.82  E-value=3.1e-09  Score=79.00  Aligned_cols=68  Identities=19%  Similarity=0.312  Sum_probs=58.2

Q ss_pred             HHHHHHHHHHHHhh-hcCCCC--CCHHHHHHHHHh---cCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhh
Q 009980          361 EEEIQNLRIHFRTI-CANGDN--ATLSEFEEVLKA---MNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSS  428 (521)
Q Consensus       361 ~~~~~~l~~~F~~~-D~~~~g--i~~~el~~~l~~---~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~  428 (521)
                      ++.+..+..+|.+| |++|++  |+..||+.+++.   .+...+.+.+.++++.+|.|+||.|+|+||+..+..
T Consensus         5 E~ai~~ii~vF~kya~~dg~~~~ls~~Elk~Ll~~e~~~~~~~~~~~~~~~~~~lD~d~Dg~IdF~EF~~l~~~   78 (89)
T d1k8ua_           5 DQAIGLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGA   78 (89)
T ss_dssp             HHHHHHHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHHHHHHTTTCEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcccCCCCCeecHHHHHHHHHHHHHhhccCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHH
Confidence            34567889999998 888887  899999999987   466666778999999999999999999999988765

>d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a3 [TaxId: 9606]

Probab=98.82  E-value=3.2e-09  Score=79.66  Aligned_cols=69  Identities=20%  Similarity=0.277  Sum_probs=56.7

Q ss_pred             HHHHHHHHHHHHhh-hcCCCC--CCHHHHHHHHHhcC-----CCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhc
Q 009980          361 EEEIQNLRIHFRTI-CANGDN--ATLSEFEEVLKAMN-----MSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSL  429 (521)
Q Consensus       361 ~~~~~~l~~~F~~~-D~~~~g--i~~~el~~~l~~~~-----~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~  429 (521)
                      ++.+..+..+|.+| |.+|+|  |+..||+++|+...     ...+...+.++++.+|.|+||.|+|+||+..+..+
T Consensus         5 E~~i~~i~~vF~kya~~dGd~~~ls~~Elk~ll~~~~~~~~~~~~~~~~~~~~~~~lD~n~Dg~IdF~EF~~l~~~l   81 (93)
T d1ksoa_           5 EQAVAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLACL   81 (93)
T ss_dssp             HHHHHHHHHHHHHHHTSSSCTTCEEHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHTTTCEECHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCcCCCCCeECHHHHHHHHHHhhhcccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence            45667889999998 888887  99999999998753     33345688999999999999999999999887653

>d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a6 [TaxId: 9606]

Probab=98.82  E-value=3.5e-09  Score=78.72  Aligned_cols=67  Identities=16%  Similarity=0.307  Sum_probs=54.6

Q ss_pred             HHHHHhHhh-ccCCCc-ceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          437 ALRLCFQMY-DIDRSG-CITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       437 ~l~~~f~~~-D~d~~G-~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      .+..+|..| |+||+| .|+..||+.++....+..   ...+++.++.+++.+|.|+||.|+|+||..+|..
T Consensus        10 ~ii~vF~kya~~dg~~~~ls~~Elk~Ll~~e~~~~---~~~~~~~~~~~~~~lD~d~Dg~IdF~EF~~l~~~   78 (89)
T d1k8ua_          10 LLVAIFHKYSGREGDKHTLSKKELKELIQKELTIG---SKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGA   78 (89)
T ss_dssp             HHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCG---GGTTSHHHHHHHHHHHHTTTCEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHcccCCCCCeecHHHHHHHHHHHHHhh---ccCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHH
Confidence            467788888 999998 699999999998632211   1135568999999999999999999999999875

>d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]

Probab=98.81  E-value=3.1e-09  Score=78.81  Aligned_cols=69  Identities=17%  Similarity=0.211  Sum_probs=58.6

Q ss_pred             HHHHHHHHHHHHhh-hcCCCC--CCHHHHHHHHHh-cCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhc
Q 009980          361 EEEIQNLRIHFRTI-CANGDN--ATLSEFEEVLKA-MNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSL  429 (521)
Q Consensus       361 ~~~~~~l~~~F~~~-D~~~~g--i~~~el~~~l~~-~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~  429 (521)
                      +..+..+..+|..| |++|+|  ++.+||+.+++. ++...+.+.++++++.+|.|+||.|+|+||+..+..+
T Consensus         6 E~ai~~ii~~F~kya~~dG~~~~l~~~Elk~ll~~e~~~~~~~~~v~~i~~~~D~n~DG~IdF~EF~~l~~~l   78 (87)
T d1xk4a1           6 EKALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLILVIKM   78 (87)
T ss_dssp             HHHHHHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCHHHHTTCHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcccCCCCCccCHHHHHHHHHHhcCCccchHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            34567889999998 888888  699999999975 5666667789999999999999999999999988653

>d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]

Probab=98.79  E-value=6.1e-09  Score=90.39  Aligned_cols=120  Identities=16%  Similarity=0.165  Sum_probs=84.3

Q ss_pred             hHHHHHHHHcCCCCcceeHHHHHHHHhh-----ccCCCcHHHHHH-----HhHhhccCCCcceeHHHHHHHHHhCCCCC-
Q 009980          401 LAPRIFDLFDNNRDGTVDMREILCGFSS-----LRKSQGDDALRL-----CFQMYDIDRSGCITKEEVASMLRALPDDC-  469 (521)
Q Consensus       401 ~~~~~f~~~D~~~~g~I~~~ef~~~~~~-----~~~~~~~~~l~~-----~f~~~D~d~~G~I~~~e~~~~l~~~~~~~-  469 (521)
                      .++++|+.+|.|+||.|+++||..++..     .+..++...+..     .+.......++.++..++...+..+.... 
T Consensus        13 ~~k~~F~~~D~d~dG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (187)
T d1uhka1          13 RHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGWKKLATDEL   92 (187)
T ss_dssp             HHHHHHHHHCTTCCSEEEHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHHhccCccHHHHHHHHHHhhhhcccccccccccHHHHHHHHHHHHHHHH
Confidence            4678999999999999999999877654     233333333222     23344556677899999877665421100 


Q ss_pred             ----CCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc-CccHHHHHHHhhhh
Q 009980          470 ----LPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR-DSSLQDVVLSSLRQ  520 (521)
Q Consensus       470 ----~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~-~~~~~~~~~~~~~~  520 (521)
                          ..........+..+|+.+|+|++|.|+.+||.+++.. +..+++++++.+++
T Consensus        93 ~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~lf~  148 (187)
T d1uhka1          93 EKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFR  148 (187)
T ss_dssp             HHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTSCCSHHHHHHHHH
T ss_pred             HhhhhhhHHHHHHHHHHHHHHHccCCCcccchHHHHHHHHHhCCCccHHHHHHHHH
Confidence                0000012234788999999999999999999999998 78899999988875

>d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Pob1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.79  E-value=2.3e-09  Score=83.64  Aligned_cols=69  Identities=19%  Similarity=0.320  Sum_probs=60.6

Q ss_pred             CCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhh
Q 009980          358 DLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSS  428 (521)
Q Consensus       358 ~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~  428 (521)
                      .+++++...+.++|+.+|++++| |+.+|+..+|...|.  ..+.+.++++.+|.|++|.|+++||..+|.-
T Consensus        15 ~lt~ee~~~y~~lF~~~D~d~~G~Is~~e~~~~l~~s~L--~~~~L~~Iw~l~D~d~dG~l~~~EF~~am~L   84 (110)
T d1iq3a_          15 RITEEQREYYVNQFRSLQPDPSSFISGSVAKNFFTKSKL--SIPELSYIWELSDADCDGALTLPEFCAAFHL   84 (110)
T ss_dssp             CCSSSSHHHHHHHHHHHCCSSSSEEEHHHHHHHCCSSSC--SSCCHHHHHHHHCSSSCSEEEHHHHHHHHHH
T ss_pred             ccCHHHHHHHHHHHHHhCCCcccchhHHHHHHHHHhhcc--chHHHHHHHHHhccCCCCeECHHHHHHHHHH
Confidence            46788999999999999999999 999999999887664  4578999999999999999999999987753

>d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]

Probab=98.78  E-value=1.9e-09  Score=79.98  Aligned_cols=65  Identities=22%  Similarity=0.353  Sum_probs=53.5

Q ss_pred             HHHHHHhHhh-ccCCCcce-eHHHHHHHHHh-CCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          436 DALRLCFQMY-DIDRSGCI-TKEEVASMLRA-LPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       436 ~~l~~~f~~~-D~d~~G~I-~~~e~~~~l~~-~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      +.+..+|..| |+||+|.+ +.+||+.++.. ++..      .+++.++.+++.+|.|+||.|+|+||..+|..
T Consensus        10 ~~ii~~F~kya~~dG~~~~l~~~Elk~ll~~e~~~~------~~~~~v~~i~~~~D~n~DG~IdF~EF~~l~~~   77 (87)
T d1xk4a1          10 NSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQY------IRKKGADVWFKELDINTDGAVNFQEFLILVIK   77 (87)
T ss_dssp             HHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCHH------HHTTCHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHcccCCCCCccCHHHHHHHHHHhcCCc------cchHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            3567788887 89999865 99999999976 4432      34457999999999999999999999999875

>d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Nucleobindin 1 (CALNUC)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.77  E-value=7.2e-09  Score=79.43  Aligned_cols=65  Identities=20%  Similarity=0.180  Sum_probs=48.3

Q ss_pred             chHHHHHHHHcCCCCcceeHHHHHHHHhhccC----------------CCcHHHHHHHhHhhccCCCcceeHHHHHHHHH
Q 009980          400 PLAPRIFDLFDNNRDGTVDMREILCGFSSLRK----------------SQGDDALRLCFQMYDIDRSGCITKEEVASMLR  463 (521)
Q Consensus       400 ~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~----------------~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~  463 (521)
                      -.++.+|+.+|.|+||.|+.+||..++.....                ...+..+..+|+.+|.|+||.||++||..++.
T Consensus        16 ~~~r~~F~~~D~DgdG~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~D~d~DG~Is~~EF~~~~~   95 (99)
T d1snla_          16 FNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLASTQ   95 (99)
T ss_dssp             CCHHHHHHHHCSSCCSEEEHHHHHHHHHHHHHTTSCCSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHHHHHHHHH
T ss_pred             cCHHHHHHHHCCCCCCcCCHHHHHHHHHHHHHhcchhhhhhhhhhhhHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHh
Confidence            34677888888888888888888877754321                01124577899999999999999999988876


Q ss_pred             h
Q 009980          464 A  464 (521)
Q Consensus       464 ~  464 (521)
                      .
T Consensus        96 ~   96 (99)
T d1snla_          96 R   96 (99)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.76  E-value=8.9e-09  Score=77.94  Aligned_cols=61  Identities=23%  Similarity=0.352  Sum_probs=53.8

Q ss_pred             HHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHh
Q 009980          436 DALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQ  505 (521)
Q Consensus       436 ~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~  505 (521)
                      ..++.+|+.+| +++|+|+.+|++.++...+        ++.+++..++..+|.|+||+|+++||..+|.
T Consensus        10 ~~y~~~F~~~D-~~~G~i~~~el~~~l~~~g--------l~~~~L~~Iw~~~D~~~dG~l~~~EF~~a~~   70 (95)
T d2jxca1          10 AKYDAIFDSLS-PVNGFLSGDKVKPVLLNSK--------LPVDILGRVWELSDIDHDGMLDRDEFAVAMF   70 (95)
T ss_dssp             HHHHHHHHHTC-CBTTEEEHHHHHHHHTTSS--------CCHHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred             HHHHHHHHHhC-CCCCceeHHHHHHHHHHcC--------CCHHHHHHHHHHhcCCCCCeEcHHHHHHHHH
Confidence            45788999999 8999999999999998754        4567899999999999999999999977654

>d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]

Probab=98.75  E-value=1.3e-08  Score=88.38  Aligned_cols=94  Identities=18%  Similarity=0.267  Sum_probs=71.1

Q ss_pred             HHhhhcCCCC-CCHHHHHHHHHhcC--------CC---CCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHH
Q 009980          371 FRTICANGDN-ATLSEFEEVLKAMN--------MS---SLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDAL  438 (521)
Q Consensus       371 F~~~D~~~~g-i~~~el~~~l~~~~--------~~---~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l  438 (521)
                      +...+.+..+ ++..++...+....        ..   .....+..+|..+|.|++|.|+.+||..++..++...+++++
T Consensus        66 ~~~~~~~~~~~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~is~~E~~~~l~~~g~~~~~~~~  145 (189)
T d1qv0a_          66 FRGCGMEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDC  145 (189)
T ss_dssp             HHHTTCCTTCCBCHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHHHHHHHSSCCCHHHH
T ss_pred             hhhccccCCCceehHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHccCCCCcccchhhHHHHHhcCCCCCHHHH
Confidence            4555666666 88888766665420        11   111245678999999999999999999999999888999999


Q ss_pred             HHHhHhhccCCCcceeHHHHHHHHHh
Q 009980          439 RLCFQMYDIDRSGCITKEEVASMLRA  464 (521)
Q Consensus       439 ~~~f~~~D~d~~G~I~~~e~~~~l~~  464 (521)
                      ..+|+.+|.|+||.|+++||..++..
T Consensus       146 ~~lf~~~D~d~dG~Is~~EF~~~~~~  171 (189)
T d1qv0a_         146 EATFRHCDLDNAGDLDVDEMTRQHLG  171 (189)
T ss_dssp             HHHHHHSCCCTTSCEEHHHHHHHHHH
T ss_pred             HHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence            99999999999999999999887754

>d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]

Probab=98.74  E-value=1.6e-08  Score=74.52  Aligned_cols=68  Identities=21%  Similarity=0.294  Sum_probs=55.1

Q ss_pred             HHHHHHHHHHHHhhhc-CCCC--CCHHHHHHHHHhc-----CCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhh
Q 009980          361 EEEIQNLRIHFRTICA-NGDN--ATLSEFEEVLKAM-----NMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSS  428 (521)
Q Consensus       361 ~~~~~~l~~~F~~~D~-~~~g--i~~~el~~~l~~~-----~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~  428 (521)
                      +..+..+..+|..++. +|++  |+..||+.+++..     +...+.+.++++++.+|.|+||.|+|+||+..+..
T Consensus         4 E~ai~~li~vF~kya~~~g~~~~Lsk~Elk~ll~~e~~~~~~~~~~~~~v~~~~~~lD~n~Dg~idF~EF~~li~~   79 (87)
T d1e8aa_           4 EEHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLVAI   79 (87)
T ss_dssp             HHHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSTTTSTTTTSHHHHHHHHHHHCTTCSSCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcccCCCCCeEcHHHHHHHHHHHccccccCCCCHHHHHHHHHHHcCCCCCcCCHHHHHHHHHH
Confidence            3456788999999954 5554  9999999999873     33344568999999999999999999999988765

>d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Pob1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.74  E-value=6.8e-09  Score=80.87  Aligned_cols=64  Identities=25%  Similarity=0.298  Sum_probs=54.3

Q ss_pred             cHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHh
Q 009980          434 GDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQ  505 (521)
Q Consensus       434 ~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~  505 (521)
                      ..+.+..+|+.+|+|++|+|+.+|++.++...+        ++.+++..+++.+|.|+||+|+++||..+|.
T Consensus        20 e~~~y~~lF~~~D~d~~G~Is~~e~~~~l~~s~--------L~~~~L~~Iw~l~D~d~dG~l~~~EF~~am~   83 (110)
T d1iq3a_          20 QREYYVNQFRSLQPDPSSFISGSVAKNFFTKSK--------LSIPELSYIWELSDADCDGALTLPEFCAAFH   83 (110)
T ss_dssp             SHHHHHHHHHHHCCSSSSEEEHHHHHHHCCSSS--------CSSCCHHHHHHHHCSSSCSEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCcccchhHHHHHHHHHhhc--------cchHHHHHHHHHhccCCCCeECHHHHHHHHH
Confidence            345688899999999999999999999886543        3455799999999999999999999997765

>d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.73  E-value=6.8e-09  Score=79.29  Aligned_cols=61  Identities=20%  Similarity=0.329  Sum_probs=55.3

Q ss_pred             HHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHh
Q 009980          437 ALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQ  505 (521)
Q Consensus       437 ~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~  505 (521)
                      ....+|+.+|.|++|+|+.+|+..++...+        ++.+++..+++.+|.|+||.|+++||..+|.
T Consensus        12 ~y~~~F~~~D~d~~G~i~~~e~~~~l~~s~--------L~~~~L~~i~~~~D~d~dG~L~~~EF~~am~   72 (99)
T d1qjta_          12 VYEKYYRQVEAGNTGRVLALDAAAFLKKSG--------LPDLILGKIWDLADTDGKGVLSKQEFFVALR   72 (99)
T ss_dssp             HHHHHHHHHCCTTSSCCCSHHHHHHHHTSS--------SCHHHHHHHHHHHCCSSSSSCCSHHHHHHHH
T ss_pred             HHHHHHHHHCCCCCCcccHHHHHHHHHHcC--------CcHHHHHHHHHHHcCCCCCccCHHHHHHHHH
Confidence            466899999999999999999999998754        5677999999999999999999999998875

>d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]

Probab=98.72  E-value=2.3e-08  Score=73.64  Aligned_cols=70  Identities=26%  Similarity=0.379  Sum_probs=54.6

Q ss_pred             HHHHHHhHhh-ccCCCc-ceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          436 DALRLCFQMY-DIDRSG-CITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       436 ~~l~~~f~~~-D~d~~G-~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      +.+..+|..| +++|++ +|+.+||+.++....+..... ..+++.++.+|+.+|.|+||.|+|+||..++..
T Consensus         8 ~~li~vF~kya~~~g~~~~Lsk~Elk~ll~~e~~~~~~~-~~~~~~v~~~~~~lD~n~Dg~idF~EF~~li~~   79 (87)
T d1e8aa_           8 EGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKN-IKDKAVIDEIFQGLDANQDEQVDFQEFISLVAI   79 (87)
T ss_dssp             HHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSTTTSTT-TTSHHHHHHHHHHHCTTCSSCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHcccCCCCCeEcHHHHHHHHHHHccccccC-CCCHHHHHHHHHHHcCCCCCcCCHHHHHHHHHH
Confidence            3577889888 455554 799999999998754332221 245678999999999999999999999998864

>d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calerythrin
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=98.71  E-value=4.1e-08  Score=83.89  Aligned_cols=97  Identities=18%  Similarity=0.266  Sum_probs=78.5

Q ss_pred             HHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCC--------cchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHH
Q 009980          368 RIHFRTICANGDN-ATLSEFEEVLKAMNMSSL--------VPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDAL  438 (521)
Q Consensus       368 ~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~--------~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l  438 (521)
                      ...+...|.+++| ++..++...+........        ...+..+|..+|.|++|.|+.+||..++..++  .+.+++
T Consensus        61 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~~~~~~--~~~~~~  138 (176)
T d1nyaa_          61 DYLAKEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALG--MSKAEA  138 (176)
T ss_dssp             HHHHHHHTSCTTCCBCHHHHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTT--CCHHHH
T ss_pred             HHHHHHhcCCCCCcccHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHHHccCCChhhhHHHHHHHHHhcC--CcHHHH
Confidence            4456677888888 898888777665432221        13567899999999999999999999988664  567889


Q ss_pred             HHHhHhhccCCCcceeHHHHHHHHHhCC
Q 009980          439 RLCFQMYDIDRSGCITKEEVASMLRALP  466 (521)
Q Consensus       439 ~~~f~~~D~d~~G~I~~~e~~~~l~~~~  466 (521)
                      ..+|..+|.|++|.|+++||..++....
T Consensus       139 ~~~f~~~D~d~dG~i~~~Ef~~~~~~~~  166 (176)
T d1nyaa_         139 AEAFNQVDTNGNGELSLDELLTAVRDFH  166 (176)
T ss_dssp             HHHHHHHCTTCSSEEEHHHHHHHHSCCS
T ss_pred             HHHHHHHCCCCCCcEeHHHHHHHHHHHh
Confidence            9999999999999999999999987643

>d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]

Probab=98.70  E-value=7.9e-09  Score=79.06  Aligned_cols=69  Identities=17%  Similarity=0.218  Sum_probs=56.7

Q ss_pred             CHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCC-------CCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhc
Q 009980          360 NEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNM-------SSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSL  429 (521)
Q Consensus       360 ~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~-------~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~  429 (521)
                      .++.+..+..+|..+| +++| |+..||+.+|+....       ..+...+.++|+.+|.|+||.|+|+||+.++..+
T Consensus         5 ~E~~i~~l~~~F~~y~-~~dG~i~~~El~~ll~~~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~l   81 (100)
T d1psra_           5 AERSIIGMIDMFHKYT-RRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLLGDI   81 (100)
T ss_dssp             HHHHHHHHHHHHHHTC-CTTSCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHHCTTCSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHc-CCCCcccHHHHHHHHHHHccccccccccCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHH
Confidence            3556778888999997 5678 999999999997532       2345678999999999999999999999988653

>d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

Probab=98.63  E-value=9.8e-09  Score=59.33  Aligned_cols=33  Identities=24%  Similarity=0.561  Sum_probs=28.7

Q ss_pred             cHHHHHHHhHhhccCCCcceeHHHHHHHHHhCC
Q 009980          434 GDDALRLCFQMYDIDRSGCITKEEVASMLRALP  466 (521)
Q Consensus       434 ~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~  466 (521)
                      ++++++.+|+.||+|++|+|+.+||+.+|..+|
T Consensus         1 seeel~eAF~~FDkDg~G~Is~~EL~~vm~~lG   33 (33)
T d2hf5a1           1 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLG   33 (33)
T ss_dssp             CHHHHHHHHHHHSSSCCSCBCHHHHHHHTTSCC
T ss_pred             CHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcC
Confidence            367899999999999999999999999887653

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.61  E-value=1.1e-07  Score=87.02  Aligned_cols=148  Identities=16%  Similarity=0.132  Sum_probs=98.1

Q ss_pred             ccccccccceeecccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHH
Q 009980            3 QETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDA   82 (521)
Q Consensus         3 ~~~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (521)
                      ++...+...|+..+..+-|+-+.||+...    .++.++||+........                            ..
T Consensus         7 ~~l~~~~~~~~~~~~~~G~s~~~v~rv~~----~~~~~vlk~~~~~~~~~----------------------------~~   54 (263)
T d1j7la_           7 PELKKLIEKYRCVKDTEGMSPAKVYKLVG----ENENLYLKMTDSRYKGT----------------------------TY   54 (263)
T ss_dssp             HHHHHHHTTSEEEECSCCCSSSEEEEEEC----SSCEEEEEEECGGGTTS----------------------------TT
T ss_pred             HHHHHhhhceEEEEcCCCCCCCcEEEEEe----CCCeEEEEEcCCCcccc----------------------------hh
Confidence            44555667888887766666678998753    45568889875432211                            12


Q ss_pred             HHHHHHHHHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH--
Q 009980           83 LLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQ--  160 (521)
Q Consensus        83 ~~~~E~~~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qil~al~~lH~--  160 (521)
                      .+.+|...++.+.    .+--+++++.+..+++..|+||++++|.++.+.....     .....++.++...+..||+  
T Consensus        55 ~~~~E~~~l~~l~----~~vpvP~vl~~~~~~~~~~lv~~~l~G~~~~~~~~~~-----~~~~~~~~~l~~~l~~lH~~~  125 (263)
T d1j7la_          55 DVEREKDMMLWLE----GKLPVPKVLHFERHDGWSNLLMSEADGVLCSEEYEDE-----QSPEKIIELYAECIRLFHSID  125 (263)
T ss_dssp             CHHHHHHHHHHHT----TTSCCCCEEEEEEETTEEEEEEECCSSEEHHHHTTTC-----SCHHHHHHHHHHHHHHHHTSC
T ss_pred             hHHHHHHHHHHHh----ccCCCCcEEEEEecCCceEEEEEeccccccccccccc-----ccHHHHHHHHHHHHHHHhccC
Confidence            3678888888872    3444678888888999999999999998875543211     1122233344444444442  


Q ss_pred             ---------------------------------------------------------CCCeeccCCCCcEEEeeCCCCCC
Q 009980          161 ---------------------------------------------------------ANIVHRDLKPENCLFLNDREDSP  183 (521)
Q Consensus       161 ---------------------------------------------------------~~i~H~dlkp~Nil~~~~~~~~~  183 (521)
                                                                               ..++|+|+.|.|||+   +.++.
T Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~---~~~~~  202 (263)
T d1j7la_         126 ISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFV---KDGKV  202 (263)
T ss_dssp             CTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGGSTTCSCSSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEE---ETTEE
T ss_pred             ccccccCcchhhhhhhHHHHHHHHhhhhhhhcccccccchHHHHHHHHHHhcCCcCCcEEEEeeccCcceee---cCCce
Confidence                                                                     137899999999999   44444


Q ss_pred             EEEeecCCCcc
Q 009980          184 LKIMDFGLSSV  194 (521)
Q Consensus       184 ~kl~Dfg~a~~  194 (521)
                      +-|+||+.+..
T Consensus       203 ~~lIDwe~a~~  213 (263)
T d1j7la_         203 SGFIDLGRSGR  213 (263)
T ss_dssp             EEECCCTTCEE
T ss_pred             EEEeechhccc
Confidence            56999987753

>d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]

Probab=98.61  E-value=1.1e-08  Score=78.25  Aligned_cols=68  Identities=25%  Similarity=0.401  Sum_probs=49.9

Q ss_pred             HHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCC-CCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          438 LRLCFQMYDIDRSGCITKEEVASMLRALPDDCLP-VDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       438 l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~-~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      +..+|..|| +++|.|+..||..++....+.... .+..++..++.+|+.+|.|+||.|+|+||..+|..
T Consensus        12 l~~~F~~y~-~~dG~i~~~El~~ll~~~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~   80 (100)
T d1psra_          12 MIDMFHKYT-RRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLLGD   80 (100)
T ss_dssp             HHHHHHHTC-CTTSCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHHCTTCSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHc-CCCCcccHHHHHHHHHHHccccccccccCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHHH
Confidence            445566665 789999999999999875321000 00012347899999999999999999999998875

>d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.55  E-value=4.4e-08  Score=74.62  Aligned_cols=59  Identities=17%  Similarity=0.274  Sum_probs=34.2

Q ss_pred             HHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHh
Q 009980          367 LRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFS  427 (521)
Q Consensus       367 l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~  427 (521)
                      +.++|+.+|.+++| |+.+|+..+++..|.  +.+++..+|+.+|.|++|.|+++||..++.
T Consensus        13 y~~~F~~~D~d~~G~i~~~e~~~~l~~s~L--~~~~L~~i~~~~D~d~dG~L~~~EF~~am~   72 (99)
T d1qjta_          13 YEKYYRQVEAGNTGRVLALDAAAFLKKSGL--PDLILGKIWDLADTDGKGVLSKQEFFVALR   72 (99)
T ss_dssp             HHHHHHHHCCTTSSCCCSHHHHHHHHTSSS--CHHHHHHHHHHHCCSSSSSCCSHHHHHHHH
T ss_pred             HHHHHHHHCCCCCCcccHHHHHHHHHHcCC--cHHHHHHHHHHHcCCCCCccCHHHHHHHHH
Confidence            44556666666666 666666666655443  244556666666666666666666655543

>d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Cow (Bos taurus), s100b [TaxId: 9913]

Probab=98.42  E-value=4.4e-07  Score=66.82  Aligned_cols=68  Identities=18%  Similarity=0.352  Sum_probs=53.9

Q ss_pred             HHHHHHHHHHHhhhc-CCCC--CCHHHHHHHHHh-----cCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhc
Q 009980          362 EEIQNLRIHFRTICA-NGDN--ATLSEFEEVLKA-----MNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSL  429 (521)
Q Consensus       362 ~~~~~l~~~F~~~D~-~~~g--i~~~el~~~l~~-----~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~  429 (521)
                      +.+..+..+|..|.. +|+.  ++..||+.+++.     ++.......++++|+.+|.|+||.|+|+||+..+..+
T Consensus         6 ~ai~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~~d~~m~~LD~n~Dg~vdF~EF~~li~~l   81 (90)
T d3cr5x1           6 KAVVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMI   81 (90)
T ss_dssp             HHHHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence            456778899999954 5554  999999999987     2333334578999999999999999999999887653

>d1tuza_ a.39.1.7 (A:) Diacylglycerol kinase alpha, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Diacylglycerol kinase alpha, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.35  E-value=3.5e-08  Score=77.50  Aligned_cols=91  Identities=15%  Similarity=0.224  Sum_probs=66.7

Q ss_pred             HHHHHhhhccCCCCHHHHHHHHHHHHhhhc---CCCC-CCHHHHHHHHHhcCCCC--CcchHHHHHHHHcCCCC------
Q 009980          347 TKKLKNLLGSHDLNEEEIQNLRIHFRTICA---NGDN-ATLSEFEEVLKAMNMSS--LVPLAPRIFDLFDNNRD------  414 (521)
Q Consensus       347 ~~~l~~l~~~~~~~~~~~~~l~~~F~~~D~---~~~g-i~~~el~~~l~~~~~~~--~~~~~~~~f~~~D~~~~------  414 (521)
                      ...+.+|.....+++.+++.+.+.|+....   ..+| |+.++|+.++..+....  ....++++|+.||.|++      
T Consensus        10 p~~l~~L~~~T~fs~~ei~~l~~~Fk~~~~~~~~p~g~i~~~~F~~~~~~~f~~~~~~~~l~~rlF~~FD~~~d~~~~~~   89 (118)
T d1tuza_          10 PSDFAQLQKYMEYSTKKVSDVLKLFEDGEMAKYVQGDAIGYEGFQQFLKIYLEVDNVPRHLSLALFQSFETGHCLNETNV   89 (118)
T ss_dssp             HHHHHHHHHHHHHCCCCHHHHHHHHHTSGGGGGEETTEECHHHHHHHHHHHTTCSSCCHHHHHHHHHHSCCCCCTTCCCC
T ss_pred             HHHHHHHHHHcCCCHHHHHHHHHHHhccccccCCcccccCHHHHHHHHHHhCCCCCchHHHHHHHHHHHccccccccccC
Confidence            345566666677888999999999975532   2345 99999999988764432  24577899999999876      


Q ss_pred             --cceeHHHHHHHHhhccCCCcHHH
Q 009980          415 --GTVDMREILCGFSSLRKSQGDDA  437 (521)
Q Consensus       415 --g~I~~~ef~~~~~~~~~~~~~~~  437 (521)
                        |.|+|+||+.+++.+.....+++
T Consensus        90 ~~g~I~f~efv~~LS~l~~G~~eeK  114 (118)
T d1tuza_          90 TKDVVCLNDVSCYFSLLEGGRPEDK  114 (118)
T ss_dssp             CSCCEEHHHHHHHHHHHHSCCCSCC
T ss_pred             CCceeeHHHHHHHHHHHcCCCHHHh
Confidence              88999999999887655544443

>d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]

Probab=98.32  E-value=6.4e-07  Score=66.49  Aligned_cols=68  Identities=22%  Similarity=0.330  Sum_probs=54.7

Q ss_pred             HHHHHHHHHHHhhhc-CCCC--CCHHHHHHHHHh-----cCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhc
Q 009980          362 EEIQNLRIHFRTICA-NGDN--ATLSEFEEVLKA-----MNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSL  429 (521)
Q Consensus       362 ~~~~~l~~~F~~~D~-~~~g--i~~~el~~~l~~-----~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~  429 (521)
                      ..+..+..+|..|.. +|+.  ++..||+.+++.     ++.....+.++++|+.+|.|+||.|+|+||+..+..+
T Consensus         6 ~ai~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~li~~l   81 (95)
T d1qlsa_           6 RCIESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFLNLIGGL   81 (95)
T ss_dssp             HHHHHHHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHHHCCCTHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCcCCCcCcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHH
Confidence            446678889999864 4553  999999999976     3444556789999999999999999999999887654

>d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100p [TaxId: 9606]

Probab=98.29  E-value=1.2e-06  Score=64.90  Aligned_cols=68  Identities=15%  Similarity=0.239  Sum_probs=51.9

Q ss_pred             HHHHHHHHHHHhhhc-CCCC--CCHHHHHHHHHh-----cCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhc
Q 009980          362 EEIQNLRIHFRTICA-NGDN--ATLSEFEEVLKA-----MNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSL  429 (521)
Q Consensus       362 ~~~~~l~~~F~~~D~-~~~g--i~~~el~~~l~~-----~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~  429 (521)
                      ..+..+..+|..|.. +|+.  ++..||+.+++.     +....+...++++++.+|.|+||.|+|+||+..+..+
T Consensus         6 ~ai~~ii~vFhkYa~~~g~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li~~l   81 (94)
T d1j55a_           6 TAMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAAI   81 (94)
T ss_dssp             HHHHHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcccCCCcccCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence            456678899999854 5554  999999999986     3333445689999999999999999999999887653

>d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

Probab=98.24  E-value=4.7e-07  Score=52.11  Aligned_cols=30  Identities=23%  Similarity=0.502  Sum_probs=28.1

Q ss_pred             hhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          477 PGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       477 ~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      ++++.++|+.||+|+||+|+.+|+..+|+.
T Consensus         2 eeel~eAF~~FDkDg~G~Is~~EL~~vm~~   31 (33)
T d2hf5a1           2 EEEIREAFRVFDKDGNGYISAAELRHVMTN   31 (33)
T ss_dssp             HHHHHHHHHHHSSSCCSCBCHHHHHHHTTS
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            568999999999999999999999999875

>d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Cow (Bos taurus), s100b [TaxId: 9913]

Probab=98.24  E-value=2.1e-06  Score=63.07  Aligned_cols=69  Identities=25%  Similarity=0.429  Sum_probs=52.1

Q ss_pred             HHHHHhHhhc-cCCC-cceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          437 ALRLCFQMYD-IDRS-GCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       437 ~l~~~f~~~D-~d~~-G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      .+..+|..|. ++|+ +.++..||+.++..--+.-.. ....+..++.+|+.+|.|+||.|+|+||..++..
T Consensus        10 ~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~-~~~d~~~~d~~m~~LD~n~Dg~vdF~EF~~li~~   80 (90)
T d3cr5x1          10 ALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLE-EIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAM   80 (90)
T ss_dssp             HHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCTTTSC-CCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHhccCCCcCcCCHHHHHHHHHHHHHHHhc-CCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence            4677888884 4554 579999999999873222111 1234567999999999999999999999988764

>d1ctda_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=98.22  E-value=4.7e-07  Score=49.58  Aligned_cols=31  Identities=32%  Similarity=0.633  Sum_probs=26.7

Q ss_pred             cHHHHHHHhHhhccCCCcceeHHHHHHHHHh
Q 009980          434 GDDALRLCFQMYDIDRSGCITKEEVASMLRA  464 (521)
Q Consensus       434 ~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~  464 (521)
                      +++++..+|+.||+|+||+|+.+||..++..
T Consensus         2 sEeELae~FRifDkNaDGyiD~eEl~~ilr~   32 (34)
T d1ctda_           2 SEEELANAFRIFDKNADGYIDIEELGEILRA   32 (34)
T ss_dssp             HHHHHHHHHHTTCCSSSSCBCHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHccCCcccccHHHHHHHHHh
Confidence            4678889999999999999999999888764

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=98.12  E-value=7.6e-06  Score=79.01  Aligned_cols=88  Identities=13%  Similarity=0.028  Sum_probs=50.4

Q ss_pred             cccccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHH
Q 009980           15 TDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKI   94 (521)
Q Consensus        15 ~~~lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l   94 (521)
                      .+.||.|....||++....  .++.|+||.-.........+                     ..........|...++.+
T Consensus        31 ~~eig~G~~N~vfrV~~~~--~~~svivKqa~p~~r~~g~~---------------------~~~~~~R~~~E~~~L~~~   87 (392)
T d2pula1          31 CQEIGDGNLNYVFHIYDQE--HDRALIIKQAVPYAKVVGES---------------------WPLTIDRARIESSALIRQ   87 (392)
T ss_dssp             EEECCSSSSEEEEEEEC------CEEEEEEECCGGGC--CC---------------------CCCCTTHHHHHHHHHHHH
T ss_pred             EEEeCCCceEeEEEEEeCC--CCeEEEEecCCchhcccCCC---------------------CCCCHHHHHHHHHHHHHh
Confidence            4578999999999998765  56789999854211100000                     001112345688888766


Q ss_pred             hhccCCCCCccceeEEEEeCCeEEEEEeccCCCch
Q 009980           95 VENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL  129 (521)
Q Consensus        95 ~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L  129 (521)
                      ...  ....+++++.+  ++...++|||++.+..+
T Consensus        88 ~~~--~p~~vP~v~~~--d~~~~~lvmE~L~~~~~  118 (392)
T d2pula1          88 GEH--VPHLVPRVFYS--DTEMAVTVMEDLSHLKI  118 (392)
T ss_dssp             HTT--CGGGSCCEEEE--ETTTTEEEECCCTTSEE
T ss_pred             hhh--CCCCcceEEEE--cCCCCEEEEeccCCccc
Confidence            321  11345566543  55566899999987654

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=98.12  E-value=6e-06  Score=74.58  Aligned_cols=80  Identities=18%  Similarity=0.083  Sum_probs=54.6

Q ss_pred             eeecccccccC-ceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHH
Q 009980           12 YEVTDILGRGG-FSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILV   90 (521)
Q Consensus        12 Y~~~~~lG~G~-~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   90 (521)
                      +++. .+..|. -+.||+....   .+..+++|......                               ...+..|...
T Consensus        13 ~~~~-~~~~G~s~~~v~r~~~~---~~~~~vlK~~~~~~-------------------------------~~~l~~E~~~   57 (255)
T d1nd4a_          13 YDWA-QQTIGCSDAAVFRLSAQ---GRPVLFVKTDLSGA-------------------------------LNELQDEAAR   57 (255)
T ss_dssp             CEEE-ECSCTTSSCEEEEEECT---TSCCEEEEEECSCT-------------------------------TSCHHHHHHH
T ss_pred             CceE-EcCCcccCCeEEEEEeC---CCCEEEEEeCCccC-------------------------------HhHHHHHHHH
Confidence            4443 334444 3678988764   45668899864321                               1236788888


Q ss_pred             HHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCch
Q 009980           91 MRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL  129 (521)
Q Consensus        91 l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L  129 (521)
                      ++.+..   ..-.+++++.+..+++..++||++++|.++
T Consensus        58 l~~L~~---~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~   93 (255)
T d1nd4a_          58 LSWLAT---TGVPCAAVLDVVTEAGRDWLLLGEVPGQDL   93 (255)
T ss_dssp             HHHHHT---TTCCBCCEEEEEECSSCEEEEEECCSSEET
T ss_pred             HHHHHh---cCCCCCceeeecccccceEEEEEeeecccc
Confidence            888743   223477888888888999999999998765

>d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]

Probab=98.05  E-value=3.1e-06  Score=62.71  Aligned_cols=69  Identities=25%  Similarity=0.355  Sum_probs=50.1

Q ss_pred             HHHHHhHhhc-cCCC-cceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          437 ALRLCFQMYD-IDRS-GCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       437 ~l~~~f~~~D-~d~~-G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      .+..+|..|. ++|+ +.++..||+.++..--+.-... ...++.++.+|+.+|.|+||.|+|+||..++..
T Consensus        10 ~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~-~~d~~~vd~im~~LD~n~Dg~vdF~EF~~li~~   80 (95)
T d1qlsa_          10 SLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQN-QKDPGVLDRMMKKLDLDSDGQLDFQEFLNLIGG   80 (95)
T ss_dssp             HHHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHHH-CCCTHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHhCcCCCcCcCCHHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHHH
Confidence            4667787774 4554 6899999999997521100000 123457999999999999999999999988765

>d1xk4c1 a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]

Probab=98.00  E-value=1e-05  Score=58.23  Aligned_cols=67  Identities=16%  Similarity=0.279  Sum_probs=50.9

Q ss_pred             HHHHHHHHHHHhhhc-CCCC--CCHHHHHHHHHh-cCCC-----CCcchHHHHHHHHcCCCCcceeHHHHHHHHhh
Q 009980          362 EEIQNLRIHFRTICA-NGDN--ATLSEFEEVLKA-MNMS-----SLVPLAPRIFDLFDNNRDGTVDMREILCGFSS  428 (521)
Q Consensus       362 ~~~~~l~~~F~~~D~-~~~g--i~~~el~~~l~~-~~~~-----~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~  428 (521)
                      ..+..+..+|..|.. +|+.  ++..||+.+++. ++.-     .....+.++|+.+|.|+||.|+|+||+..+..
T Consensus         7 ~ai~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li~~   82 (83)
T d1xk4c1           7 RNIETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMAR   82 (83)
T ss_dssp             HHHHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCcCCCcccCCHHHHHHHHHHHhHHHhcCCCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHhh
Confidence            345678889999964 4443  999999999986 3211     12234789999999999999999999987653

>d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100p [TaxId: 9606]

Probab=97.99  E-value=9.8e-06  Score=59.86  Aligned_cols=69  Identities=23%  Similarity=0.333  Sum_probs=49.8

Q ss_pred             HHHHHhHhhc-cCCC-cceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          437 ALRLCFQMYD-IDRS-GCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       437 ~l~~~f~~~D-~d~~-G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      .+..+|..|. .+|+ +.++..||+.++..--+.-... ...++.++.+|+.+|.|+||.|+|+||..++..
T Consensus        10 ~ii~vFhkYa~~~g~~~tLsk~Elk~Ll~~El~~~l~~-~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li~~   80 (94)
T d1j55a_          10 MIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQS-GKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAA   80 (94)
T ss_dssp             HHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC-------CHHHHHHHHHCSSSSSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHcccCCCcccCCHHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence            4677888874 3443 5899999999998622221111 123457999999999999999999999998764

>d1xk4c1 a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]

Probab=97.98  E-value=1e-05  Score=58.14  Aligned_cols=69  Identities=19%  Similarity=0.354  Sum_probs=50.4

Q ss_pred             HHHHHhHhhcc-CC-CcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHh
Q 009980          437 ALRLCFQMYDI-DR-SGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQ  505 (521)
Q Consensus       437 ~l~~~f~~~D~-d~-~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~  505 (521)
                      .+..+|..|.. +| .+.++..||+.++..--+.-.......+..++.+|+.+|.|+||.|+|+||..++.
T Consensus        11 ~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li~   81 (83)
T d1xk4c1          11 TIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMA   81 (83)
T ss_dssp             HHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             HHHHHHHHHhCcCCCcccCCHHHHHHHHHHHhHHHhcCCCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHh
Confidence            46778888853 33 46999999999998732221111112334589999999999999999999998764

>d1ctda_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=97.97  E-value=2.5e-06  Score=46.65  Aligned_cols=31  Identities=23%  Similarity=0.499  Sum_probs=27.9

Q ss_pred             ChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          476 EPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       476 ~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      +++++.+.|+.||+|.||+|+.+||..+++.
T Consensus         2 sEeELae~FRifDkNaDGyiD~eEl~~ilr~   32 (34)
T d1ctda_           2 SEEELANAFRIFDKNADGYIDIEELGEILRA   32 (34)
T ss_dssp             HHHHHHHHHHTTCCSSSSCBCHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHccCCcccccHHHHHHHHHh
Confidence            3568999999999999999999999998864

>d1tuza_ a.39.1.7 (A:) Diacylglycerol kinase alpha, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Diacylglycerol kinase alpha, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.66  E-value=8.1e-05  Score=57.77  Aligned_cols=84  Identities=13%  Similarity=0.186  Sum_probs=65.7

Q ss_pred             CCHHHHHHHHHhcCCCCCcchHHHHHHHHc------CCCCcceeHHHHHHHHhhccCC--CcHHHHHHHhHhhccCCC--
Q 009980          381 ATLSEFEEVLKAMNMSSLVPLAPRIFDLFD------NNRDGTVDMREILCGFSSLRKS--QGDDALRLCFQMYDIDRS--  450 (521)
Q Consensus       381 i~~~el~~~l~~~~~~~~~~~~~~~f~~~D------~~~~g~I~~~ef~~~~~~~~~~--~~~~~l~~~f~~~D~d~~--  450 (521)
                      ++.+++.+..+....+  ..+++.+++.|-      ...+|.|++++|...+......  .++.-++.+|+.||.|++  
T Consensus         8 l~p~~l~~L~~~T~fs--~~ei~~l~~~Fk~~~~~~~~p~g~i~~~~F~~~~~~~f~~~~~~~~l~~rlF~~FD~~~d~~   85 (118)
T d1tuza_           8 ISPSDFAQLQKYMEYS--TKKVSDVLKLFEDGEMAKYVQGDAIGYEGFQQFLKIYLEVDNVPRHLSLALFQSFETGHCLN   85 (118)
T ss_dssp             SCHHHHHHHHHHHHHC--CCCHHHHHHHHHTSGGGGGEETTEECHHHHHHHHHHHTTCSSCCHHHHHHHHHHSCCCCCTT
T ss_pred             CCHHHHHHHHHHcCCC--HHHHHHHHHHHhccccccCCcccccCHHHHHHHHHHhCCCCCchHHHHHHHHHHHccccccc
Confidence            8888888887765443  567888888883      2357999999999998775432  346678899999999976  


Q ss_pred             ------cceeHHHHHHHHHhCC
Q 009980          451 ------GCITKEEVASMLRALP  466 (521)
Q Consensus       451 ------G~I~~~e~~~~l~~~~  466 (521)
                            |.|++.||...|..+.
T Consensus        86 ~~~~~~g~I~f~efv~~LS~l~  107 (118)
T d1tuza_          86 ETNVTKDVVCLNDVSCYFSLLE  107 (118)
T ss_dssp             CCCCCSCCEEHHHHHHHHHHHH
T ss_pred             cccCCCceeeHHHHHHHHHHHc
Confidence                  8999999999887643

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=97.24  E-value=0.0016  Score=60.43  Aligned_cols=74  Identities=11%  Similarity=0.097  Sum_probs=48.3

Q ss_pred             ceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHHhhccCCCC
Q 009980           23 FSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHP  102 (521)
Q Consensus        23 ~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~hp  102 (521)
                      -..||++...   +|..|++|+.+...                             .+...+..|+..+..|...-...|
T Consensus        35 EN~vy~v~~~---dg~~~VlK~~rp~~-----------------------------~s~~~i~~E~~~l~~L~~~gipv~   82 (325)
T d1zyla1          35 ENRVYQFQDE---DRRRFVVKFYRPER-----------------------------WTADQILEEHQFALQLVNDEVPVA   82 (325)
T ss_dssp             SSEEEEECCT---TCCCEEEEEECTTT-----------------------------SCHHHHHHHHHHHHHHHHTTCSBC
T ss_pred             cceeEEEEcC---CCCEEEEEEeCCCC-----------------------------CCHHHHHHHHHHHHHHHhcCCCCC
Confidence            4589999875   57789999975321                             234568889999999855422222


Q ss_pred             Cccce--eEEEEeCCeEEEEEeccCCCc
Q 009980          103 NVIDL--YDVYEDQNGVHLILELCSGGE  128 (521)
Q Consensus       103 niv~~--~~~~~~~~~~~lv~e~~~gg~  128 (521)
                      ..+..  -..+...+..+.+++++.|..
T Consensus        83 ~p~~~~g~~~~~~~~~~~~l~~~~~G~~  110 (325)
T d1zyla1          83 APVAFNGQTLLNHQGFYFAVFPSVGGRQ  110 (325)
T ss_dssp             CCCCBTTBSCEEETTEEEEEEECCCCEE
T ss_pred             CceecCCCeeeeeeeEEEEEEeecCCcC
Confidence            22222  123456778899999998743

>d1sraa_ a.39.1.3 (A:) C-terminal (EC) domain of BM-40/SPARC/osteonectin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Osteonectin
domain: C-terminal (EC) domain of BM-40/SPARC/osteonectin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.22  E-value=8.1e-05  Score=59.43  Aligned_cols=62  Identities=19%  Similarity=0.297  Sum_probs=51.2

Q ss_pred             HHHHHhHhhccC-CCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHhc
Q 009980          437 ALRLCFQMYDID-RSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQR  506 (521)
Q Consensus       437 ~l~~~f~~~D~d-~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~~  506 (521)
                      -+...|..+|.| +||.|+..|+..+...+.        ..+.-+..+|+.+|.|+||.||+.||..++.-
T Consensus        78 ~v~W~F~~LD~n~~D~~L~~~EL~~l~~~L~--------~~e~C~~~F~~~CD~n~D~~Is~~EW~~Cf~v  140 (151)
T d1sraa_          78 PVHWQFGQLDQHPIDGYLSHTELAPLRAPLI--------PMEHCTTRFFETCDLDNDKYIALDEWAGCFGI  140 (151)
T ss_dssp             HHHHHHHHHCCTTCSSEECTTTTGGGGSTTS--------TTGGGHHHHHHHHCTTCSSSEEHHHHHHHTTC
T ss_pred             cceeehhhcCCCCCCCccCHHHHHHHHHhhc--------CCchHHHHHHHHhcCCCCCcCCHHHHHHHcCC
Confidence            356779999999 599999999988654332        23446899999999999999999999999875

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.92  E-value=0.0015  Score=62.37  Aligned_cols=77  Identities=13%  Similarity=0.132  Sum_probs=50.4

Q ss_pred             cccccccCceEEEEeEEccC-----CCcceEEEEEeecCCCCCCCCCCCCCCCCCCCccccccccccccccHHHHHHHHH
Q 009980           15 TDILGRGGFSVVRRGIKKTC-----GETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEIL   89 (521)
Q Consensus        15 ~~~lG~G~~g~V~~a~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   89 (521)
                      ++.|+.|-.-.+|++.....     ...+.|.+++.....                              ......+|..
T Consensus        47 v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~~~------------------------------~~idr~~E~~   96 (395)
T d1nw1a_          47 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE------------------------------TESHLVAESV   96 (395)
T ss_dssp             EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC------------------------------CHHHHHHHHH
T ss_pred             EEEcCCccccceEEEEeCCCCccccCCCCcEEEEecCCcc------------------------------hhhHHHHHHH
Confidence            46788888899999986531     133567777764210                              1123567888


Q ss_pred             HHHHHhhccCCCCCccceeEEEEeCCeEEEEEeccCCCch
Q 009980           90 VMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGEL  129 (521)
Q Consensus        90 ~l~~l~~~~~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L  129 (521)
                      +++.+.    .+.-.+++++++.  +  .+||||++|.+|
T Consensus        97 i~~~ls----~~gl~Pkll~~~~--~--g~I~efi~g~~l  128 (395)
T d1nw1a_          97 IFTLLS----ERHLGPKLYGIFS--G--GRLEEYIPSRPL  128 (395)
T ss_dssp             HHHHHH----HTTSSSCEEEEET--T--EEEECCCCEEEC
T ss_pred             HHHHHH----hCCCCCeEEEEcC--C--ceEEEEeccccC
Confidence            888873    3444567777764  2  589999998655

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=96.47  E-value=0.0046  Score=56.84  Aligned_cols=151  Identities=17%  Similarity=0.147  Sum_probs=80.6

Q ss_pred             cccccceeeccc-----ccccCceEEEEeEEccCCCcceEEEEEeecCCCCCCCCCCCCCCCCCCCcccccccccccccc
Q 009980            6 RKLTDEYEVTDI-----LGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVS   80 (521)
Q Consensus         6 ~~~~~~Y~~~~~-----lG~G~~g~V~~a~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (521)
                      ..+..+|.+++.     |..|.-.+.|+....    +..|++|++....                              .
T Consensus         9 ~~~l~~Y~lg~~~~~~~i~~G~~N~ny~v~t~----~g~yVLri~~~~~------------------------------~   54 (316)
T d2ppqa1           9 RNFLTQYDVGSLTSYKGIAEGVENSNFLLHTT----KDPLILTLYEKRV------------------------------E   54 (316)
T ss_dssp             HHHHTTBCCCCEEEEEEECC---EEEEEEEES----SCCEEEEEECC---------------------------------
T ss_pred             HHHHHhCCCCCceEeecCCCCcccCeEEEEEC----CCcEEEEEcCCCC------------------------------C
Confidence            445567877543     446666888998764    3359999985421                              1


Q ss_pred             HHHHHHHHHHHHHHhhccCCCCCcccee---EEEEeCCeEEEEEeccCCCchHH--------------HHHhc-C-----
Q 009980           81 DALLTNEILVMRKIVENVSPHPNVIDLY---DVYEDQNGVHLILELCSGGELFD--------------RIVAQ-E-----  137 (521)
Q Consensus        81 ~~~~~~E~~~l~~l~~~~~~hpniv~~~---~~~~~~~~~~lv~e~~~gg~L~~--------------~l~~~-~-----  137 (521)
                      ...+..|+.++..|.......|..+...   .+..-......++.++.|.....              .+... .     
T Consensus        55 ~~~l~~~~~~l~~L~~~g~pvp~pi~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  134 (316)
T d2ppqa1          55 KNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIK  134 (316)
T ss_dssp             CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCC
T ss_pred             HHHHHHHHHHHHhhhhccccccccceecCCCcceeeecccceeeeecccccccccchhHHHHHHHHHHhhhhhhhhcccc
Confidence            1236678888888855433444443321   11233456667777777643310              00000 0     


Q ss_pred             ---CCCH------------------HHHHHHHHHHHHHHHHHH----HCCCeeccCCCCcEEEeeCCCCCCEEEeecCCC
Q 009980          138 ---RYME------------------VGAAAVIRQIAEGLAALH----QANIVHRDLKPENCLFLNDREDSPLKIMDFGLS  192 (521)
Q Consensus       138 ---~~~~------------------~~~~~i~~qil~al~~lH----~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a  192 (521)
                         ....                  ......+..+...+.-.+    ..|++|+|+.++||++   +.+...-|+||+.|
T Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L~~giIHgDl~~dNvl~---~~~~v~gvIDF~~~  211 (316)
T d2ppqa1         135 RPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFF---LGDELSGLIDFYFA  211 (316)
T ss_dssp             CBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEE---ETTEEEEECCCTTC
T ss_pred             cccccchhhcchhhhHHHHhhhhcchhHHHHHHHHHHhhhccCccccccccccCCcchhhhhc---ccccceeEeccccc
Confidence               0000                  011122222222222222    2479999999999999   55555689999977


Q ss_pred             c
Q 009980          193 S  193 (521)
Q Consensus       193 ~  193 (521)
                      .
T Consensus       212 ~  212 (316)
T d2ppqa1         212 C  212 (316)
T ss_dssp             E
T ss_pred             c
Confidence            4

>d1sraa_ a.39.1.3 (A:) C-terminal (EC) domain of BM-40/SPARC/osteonectin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Osteonectin
domain: C-terminal (EC) domain of BM-40/SPARC/osteonectin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.25  E-value=0.00092  Score=53.18  Aligned_cols=60  Identities=20%  Similarity=0.219  Sum_probs=37.4

Q ss_pred             HHHHHHHHcCC-CCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHH
Q 009980          402 APRIFDLFDNN-RDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLR  463 (521)
Q Consensus       402 ~~~~f~~~D~~-~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~  463 (521)
                      +.-.|..+|.| .||.|+..|+..+...+  ...+.-++..|+..|.|+||.||..|+...+.
T Consensus        79 v~W~F~~LD~n~~D~~L~~~EL~~l~~~L--~~~e~C~~~F~~~CD~n~D~~Is~~EW~~Cf~  139 (151)
T d1sraa_          79 VHWQFGQLDQHPIDGYLSHTELAPLRAPL--IPMEHCTTRFFETCDLDNDKYIALDEWAGCFG  139 (151)
T ss_dssp             HHHHHHHHCCTTCSSEECTTTTGGGGSTT--STTGGGHHHHHHHHCTTCSSSEEHHHHHHHTT
T ss_pred             ceeehhhcCCCCCCCccCHHHHHHHHHhh--cCCchHHHHHHHHhcCCCCCcCCHHHHHHHcC
Confidence            44457777777 47777777755432212  22333466667777777777777777776665

>d1qasa1 a.39.1.7 (A:205-298) Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.32  E-value=0.066  Score=38.81  Aligned_cols=68  Identities=10%  Similarity=0.173  Sum_probs=53.0

Q ss_pred             cHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCC----CcceeHHHHHHHHhc
Q 009980          434 GDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANN----DGKVTFDEFRAAMQR  506 (521)
Q Consensus       434 ~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~----dG~I~~~Ef~~~~~~  506 (521)
                      ...++..+|+.+-.+ .+.+|.++|..+|......    ...+++.+..++..+..+.    .|.++++.|..+|..
T Consensus         6 ~R~ei~~if~~ys~~-~~~mt~~~f~~FL~~eQ~~----~~~~~~~~~~ii~~~e~~~~~~~~~~ls~~gF~~fL~S   77 (94)
T d1qasa1           6 QRAEIDRAFEEAAGS-AETLSVERLVTFLQHQQRE----EEAGPALALSLIERYEPSETAKAQRQMTKDGFLMYLLS   77 (94)
T ss_dssp             CCHHHHHHHHHHHTT-SSSCBHHHHHHHHHHTSCC----TTCSHHHHHHHHHHHCCCHHHHHTTBCCHHHHHHHHHS
T ss_pred             ccHHHHHHHHHHhCC-CCccCHHHHHHHHHHHcCC----ccCCHHHHHHHHHHHcccHhhhhcCCcCHHHHHHHHcC
Confidence            446789999999644 5789999999999874322    1256677899999997664    377999999999977

>d1qasa1 a.39.1.7 (A:205-298) Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.55  E-value=0.08  Score=38.36  Aligned_cols=61  Identities=8%  Similarity=0.170  Sum_probs=28.1

Q ss_pred             HHHHHHHhhhcCCCCCCHHHHHHHHHhcCCC--CCcchHHHHHHHHcCCC----CcceeHHHHHHHH
Q 009980          366 NLRIHFRTICANGDNATLSEFEEVLKAMNMS--SLVPLAPRIFDLFDNNR----DGTVDMREILCGF  426 (521)
Q Consensus       366 ~l~~~F~~~D~~~~gi~~~el~~~l~~~~~~--~~~~~~~~~f~~~D~~~----~g~I~~~ef~~~~  426 (521)
                      ++..+|..+..+++.++.++|..+|+.--..  .+.+.+.+++..+.++.    .|.+++++|...+
T Consensus         9 ei~~if~~ys~~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~ii~~~e~~~~~~~~~~ls~~gF~~fL   75 (94)
T d1qasa1           9 EIDRAFEEAAGSAETLSVERLVTFLQHQQREEEAGPALALSLIERYEPSETAKAQRQMTKDGFLMYL   75 (94)
T ss_dssp             HHHHHHHHHHTTSSSCBHHHHHHHHHHTSCCTTCSHHHHHHHHHHHCCCHHHHHTTBCCHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCccCHHHHHHHHHHHcCCccCCHHHHHHHHHHHcccHhhhhcCCcCHHHHHHHH
Confidence            3445555555444336666666666653211  12233444555544332    1334444444444

>d2cclb1 a.139.1.1 (B:1-59) Endo-1,4-beta-xylanase Y {Clostridium thermocellum [TaxId: 1515]}

class: All alpha proteins
fold: Type I dockerin domain
superfamily: Type I dockerin domain
family: Type I dockerin domain
domain: Endo-1,4-beta-xylanase Y
species: Clostridium thermocellum [TaxId: 1515]

Probab=91.18  E-value=0.19  Score=32.56  Aligned_cols=52  Identities=13%  Similarity=0.272  Sum_probs=39.0

Q ss_pred             ccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcCCCCcceeHHHHHHHHh
Q 009980          446 DIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQ  505 (521)
Q Consensus       446 D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dG~I~~~Ef~~~~~  505 (521)
                      |.|++|.|+.-++..+........    ..+    ..-+...|.|+||.|+..++..+.+
T Consensus         2 DvN~Dg~vni~D~~~l~~~il~~~----~~~----~~~~~aaDvn~Dg~i~i~D~~~l~~   53 (59)
T d2cclb1           2 DVNGDGTINSTDLTMLKRSVLRAI----TLT----DDAKARADVDKNGSINAADVLLLSR   53 (59)
T ss_dssp             CTTCSSSCCHHHHHHHHHHHTTSS----CCC----HHHHHHHCTTCSSCCSHHHHHHHHH
T ss_pred             CCCCCCCCcHHHHHHHHHHHhCCC----CCC----hhhhhccccCCCCCCCHHHHHHHHH
Confidence            678999999999988876543221    122    2346789999999999999888765

>d1j7qa_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium vector protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=89.31  E-value=1.2  Score=28.33  Aligned_cols=71  Identities=20%  Similarity=0.152  Sum_probs=54.0

Q ss_pred             CCCHHHHHHHHHHHHhhhcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHc-CCCC-cceeHHHHHHHHhh
Q 009980          358 DLNEEEIQNLRIHFRTICANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFD-NNRD-GTVDMREILCGFSS  428 (521)
Q Consensus       358 ~~~~~~~~~l~~~F~~~D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D-~~~~-g~I~~~ef~~~~~~  428 (521)
                      .+.+++..+..++|+.||.|... -..++-..+|..+|...+..+...+++..- +.+| ..|.-+|++..++.
T Consensus         7 algpeekdecmkifdifdrnaeniapvsdtmdmltklgqtytkreteaimkeargpkgdkknigpeewltlcsk   80 (86)
T d1j7qa_           7 ALGPEEKDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEARGPKGDKKNIGPEEWLTLCSK   80 (86)
T ss_dssp             CCSSTHHHHHHHHHHHHSTTTTSCBCHHHHHHHHHHTSCCCSHHHHHHHHHHHHCSSCSSCCBCTTHHHHHHHH
T ss_pred             ccCchhHHHHHHHHHHHhccccccCCcchHHHHHHHhhhHHhHHHHHHHHHHhcCCCCccccCCHHHHHHHHHH
Confidence            45678888889999999999888 467788888999999998888888887662 2232 34777777776654

>d2cclb1 a.139.1.1 (B:1-59) Endo-1,4-beta-xylanase Y {Clostridium thermocellum [TaxId: 1515]}

class: All alpha proteins
fold: Type I dockerin domain
superfamily: Type I dockerin domain
family: Type I dockerin domain
domain: Endo-1,4-beta-xylanase Y
species: Clostridium thermocellum [TaxId: 1515]

Probab=89.06  E-value=0.29  Score=31.64  Aligned_cols=50  Identities=26%  Similarity=0.335  Sum_probs=28.1

Q ss_pred             cCCCCcceeHHHHHHHHhhccCC--CcHHHHHHHhHhhccCCCcceeHHHHHHHHH
Q 009980          410 DNNRDGTVDMREILCGFSSLRKS--QGDDALRLCFQMYDIDRSGCITKEEVASMLR  463 (521)
Q Consensus       410 D~~~~g~I~~~ef~~~~~~~~~~--~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~  463 (521)
                      |.|+||.|+..+.......+...  .++    ..|...|.|+||.|+.-++..+.+
T Consensus         2 DvN~Dg~vni~D~~~l~~~il~~~~~~~----~~~~aaDvn~Dg~i~i~D~~~l~~   53 (59)
T d2cclb1           2 DVNGDGTINSTDLTMLKRSVLRAITLTD----DAKARADVDKNGSINAADVLLLSR   53 (59)
T ss_dssp             CTTCSSSCCHHHHHHHHHHHTTSSCCCH----HHHHHHCTTCSSCCSHHHHHHHHH
T ss_pred             CCCCCCCCcHHHHHHHHHHHhCCCCCCh----hhhhccccCCCCCCCHHHHHHHHH
Confidence            45666777766666555442211  122    124556777777777777665554

>d1eg3a1 a.39.1.7 (A:85-209) Dystrophin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Dystrophin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.37  E-value=1.4  Score=32.93  Aligned_cols=81  Identities=14%  Similarity=0.188  Sum_probs=52.2

Q ss_pred             HHHHHHHHHHHhhhcCCC-C-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccCCCcHHHHH
Q 009980          362 EEIQNLRIHFRTICANGD-N-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALR  439 (521)
Q Consensus       362 ~~~~~l~~~F~~~D~~~~-g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~  439 (521)
                      -.+..+.++|+....+.. . ++..++..+|..            +|........+.|+.......+           +.
T Consensus        40 v~l~~~~e~f~~~~l~~~d~~l~v~~l~~~L~~------------iy~~l~~~~~~~v~vp~~~dl~-----------LN   96 (125)
T d1eg3a1          40 LSLSAACDALDQHNLKQNDQPMDILQIINCLTT------------IYDRLEQEHNNLVNVPLCVDMC-----------LN   96 (125)
T ss_dssp             CCHHHHHHHHHHTTCCCTTSEEEHHHHHHHHHH------------HHHHHHHHSTTTCCHHHHHHHH-----------HH
T ss_pred             hhHHHHHHHHHHcCCCCCccCCCHHHHHHHHHH------------HHHHhhhhCcccCChHHHHHHH-----------HH
Confidence            344455666655544432 2 777777666554            4555554455566665544432           55


Q ss_pred             HHhHhhccCCCcceeHHHHHHHHHhC
Q 009980          440 LCFQMYDIDRSGCITKEEVASMLRAL  465 (521)
Q Consensus       440 ~~f~~~D~d~~G~I~~~e~~~~l~~~  465 (521)
                      .++..||.+++|+|+.-.|+..+..+
T Consensus        97 ~LlnvYD~~rtG~i~vls~KvaL~~L  122 (125)
T d1eg3a1          97 WLLNVYDTGRTGRIRVLSFKTGIISL  122 (125)
T ss_dssp             HHHHHHCTTCCSEEEHHHHHHHHHHT
T ss_pred             HHHHHhCCCCCCeeeehHHHHHHHHH
Confidence            78899999999999999998877654

>d1pula1 a.39.1.11 (A:18-120) Hypothetical protein c32e8.3 {Caenorhabditis elegans [TaxId: 6239]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: p25-alpha
domain: Hypothetical protein c32e8.3
species: Caenorhabditis elegans [TaxId: 6239]

Probab=88.00  E-value=3.1  Score=29.90  Aligned_cols=70  Identities=11%  Similarity=0.118  Sum_probs=52.4

Q ss_pred             CCHHHHHHHHHHHHhhhc-CCCCCCHHHHHHHHHhcC----CCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhc
Q 009980          359 LNEEEIQNLRIHFRTICA-NGDNATLSEFEEVLKAMN----MSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSL  429 (521)
Q Consensus       359 ~~~~~~~~l~~~F~~~D~-~~~gi~~~el~~~l~~~~----~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~  429 (521)
                      .+..++......|..|-. ++..++...|..+++..+    ...+...++-+|..+-..+ ..|+|++|..++..+
T Consensus         2 ~~~~~l~~~F~aF~~FG~~~~~em~~~~f~Kl~kdc~lid~K~~T~tdvDIiF~K~k~k~-~ri~f~~F~~aL~~l   76 (103)
T d1pula1           2 WDDADVKKRWDAFTKFGAATATEMTGKNFDKWLKDAGVLDNKAITGTMTGIAFSKVTGPK-KKATFDETKKVLAFV   76 (103)
T ss_dssp             CCHHHHHHHHHHHHHHTCSSSSCCCHHHHHHHHHHHTSCCSSSSCHHHHHHHHHHHTCSS-SCCCHHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHHHHhcCCCCcCCCHHHHHHHHHHcCCCcCCCCCccchhhhhHhhcCCC-CCcCHHHHHHHHHHH
Confidence            356677777788888863 332399999999999853    3456678999999986554 569999999988654

>d1wlma1 a.39.1.11 (A:8-145) Protein cgi-38 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: p25-alpha
domain: Protein cgi-38
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=85.13  E-value=2.7  Score=32.07  Aligned_cols=64  Identities=13%  Similarity=0.199  Sum_probs=47.5

Q ss_pred             HHHHHHHhhhcCC----CC--CCHHHHHHHHHhcCC----CCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhc
Q 009980          366 NLRIHFRTICANG----DN--ATLSEFEEVLKAMNM----SSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSL  429 (521)
Q Consensus       366 ~l~~~F~~~D~~~----~g--i~~~el~~~l~~~~~----~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~  429 (521)
                      .|+..|..|..=|    ++  ++...|..+++..+.    ..+...++-+|...-.-+...|+|++|+.++..+
T Consensus         9 ~L~~~F~~F~~fG~~k~~~~~m~~~~f~K~~kd~~lid~K~~T~t~~diiF~k~k~k~~r~i~f~~F~~aL~~i   82 (138)
T d1wlma1           9 GLEESFRKFAIHGDPKASGQEMNGKNWAKLCKDCKVADGKAVTGTDVDIVFSKVKAKSARVINYEEFKKALEEL   82 (138)
T ss_dssp             SHHHHHHHHHTSSCSSCCSSEEEHHHHHHHHHHTSCCCSSSSCHHHHHHHHHHHSCSSCSEEEHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhcCCCCCCcccCCHHHHHHHHHHcCCCcCCccchhhHHHHHHHhhcCCCcccCHHHHHHHHHHH
Confidence            4566666666422    33  888999999998643    3455688899999876667889999999988654

>d1h8ba_ a.39.1.7 (A:) alpha-Actinin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: alpha-Actinin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.22  E-value=3.2  Score=27.53  Aligned_cols=61  Identities=18%  Similarity=0.293  Sum_probs=45.6

Q ss_pred             CCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcC----C-CCcceeHHHHHHHHhc
Q 009980          432 SQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDA----N-NDGKVTFDEFRAAMQR  506 (521)
Q Consensus       432 ~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~----~-~dG~I~~~Ef~~~~~~  506 (521)
                      ..+.+++..+|+.+ .++..+||.+||++-|             +.++++-..+.+-.    + ..|-.+|..|.+.+-.
T Consensus         4 ~~TaEqv~~aFr~l-A~~KpyVT~~dL~~~L-------------~peqaeyc~~~M~~y~~~~~~~~ayDY~sF~~~l~g   69 (73)
T d1h8ba_           4 TDTAEQVIASFRIL-ASDKPYILAEELRREL-------------PPDQAQYCIKRMPAYSGPGSVPGALDYAAFSSALYG   69 (73)
T ss_dssp             CSTHHHHHHHHHHH-TTSCSSBCHHHHHHHS-------------CHHHHHHHHHHSCSCCCSSCCTTCBCHHHHHHHHTC
T ss_pred             cccHHHHHHHHHHH-hCCCCeeCHHHHHhhc-------------CHHHHHHHHHHCcccCCCCCCCCcccHHHHHHHHhc
Confidence            34668899999999 5679999999998653             34467777777743    2 3577999999987654

>d1dava_ a.139.1.1 (A:) Cellulosome endoglucanase SS {Clostridium thermocellum [TaxId: 1515]}

class: All alpha proteins
fold: Type I dockerin domain
superfamily: Type I dockerin domain
family: Type I dockerin domain
domain: Cellulosome endoglucanase SS
species: Clostridium thermocellum [TaxId: 1515]

Probab=83.85  E-value=0.36  Score=32.52  Aligned_cols=52  Identities=17%  Similarity=0.215  Sum_probs=24.2

Q ss_pred             cCCCCcceeHHHHHHHHhhccCCCcHHHHHHHhHhhccCCCcceeHHHHHHHHHhC
Q 009980          410 DNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRAL  465 (521)
Q Consensus       410 D~~~~g~I~~~ef~~~~~~~~~~~~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~  465 (521)
                      |.|+||.|+..+...++..+........    +...|.|+||.|+..++..+...+
T Consensus         8 DvN~DG~Vd~~D~~~~~~~i~~~~~~~~----~~~aDvn~DG~Id~~D~~~l~~~i   59 (71)
T d1dava_           8 DVNDDGKVNSTDAVALKRYVLRSGISIN----TDNADLNEDGRVNSTDLGILKRYI   59 (71)
T ss_dssp             CSSSSSBSSGGGHHHHHHHHHCSCSCCC----GGGTCSSSSSSCSSHHHHHHHHHT
T ss_pred             ccCCCCCCcHHHHHHHHHHHcCCCCcCC----CcceecCCCCCcCHHHHHHHHHHH
Confidence            4455555555555544443221111100    223566666666666665555443

>d1j7qa_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium vector protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=83.65  E-value=3.6  Score=26.06  Aligned_cols=67  Identities=13%  Similarity=0.215  Sum_probs=50.8

Q ss_pred             cHHHHHHHhHhhccCCCcceeHHHHHHHHHhCCCCCCCCCCCChhHHHHHHHHhcC-CCC-cceeHHHHHHHHhc
Q 009980          434 GDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDA-NND-GKVTFDEFRAAMQR  506 (521)
Q Consensus       434 ~~~~l~~~f~~~D~d~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~-~~d-G~I~~~Ef~~~~~~  506 (521)
                      ..++...+|..||.|....--..+-..++..++..      .+..+.+.++++.-. .+| -.|.-+||..++.+
T Consensus        12 ekdecmkifdifdrnaeniapvsdtmdmltklgqt------ytkreteaimkeargpkgdkknigpeewltlcsk   80 (86)
T d1j7qa_          12 EKDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQT------YTKRETEAIMKEARGPKGDKKNIGPEEWLTLCSK   80 (86)
T ss_dssp             HHHHHHHHHHHHSTTTTSCBCHHHHHHHHHHTSCC------CSHHHHHHHHHHHHCSSCSSCCBCTTHHHHHHHH
T ss_pred             hHHHHHHHHHHHhccccccCCcchHHHHHHHhhhH------HhHHHHHHHHHHhcCCCCccccCCHHHHHHHHHH
Confidence            34577889999999998888888888999998875      456677888887632 222 34888898887654

>d1dava_ a.139.1.1 (A:) Cellulosome endoglucanase SS {Clostridium thermocellum [TaxId: 1515]}

class: All alpha proteins
fold: Type I dockerin domain
superfamily: Type I dockerin domain
family: Type I dockerin domain
domain: Cellulosome endoglucanase SS
species: Clostridium thermocellum [TaxId: 1515]

Probab=83.36  E-value=0.15  Score=34.50  Aligned_cols=51  Identities=18%  Similarity=0.077  Sum_probs=37.8

Q ss_pred             hcCCCC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhc
Q 009980          375 CANGDN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSL  429 (521)
Q Consensus       375 D~~~~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~  429 (521)
                      |.|+|| ++..++..+++.+....+...    +...|.|+||.|+..++....+.+
T Consensus         8 DvN~DG~Vd~~D~~~~~~~i~~~~~~~~----~~~aDvn~DG~Id~~D~~~l~~~i   59 (71)
T d1dava_           8 DVNDDGKVNSTDAVALKRYVLRSGISIN----TDNADLNEDGRVNSTDLGILKRYI   59 (71)
T ss_dssp             CSSSSSBSSGGGHHHHHHHHHCSCSCCC----GGGTCSSSSSSCSSHHHHHHHHHT
T ss_pred             ccCCCCCCcHHHHHHHHHHHcCCCCcCC----CcceecCCCCCcCHHHHHHHHHHH
Confidence            789999 999999888887632222222    235799999999999998776653

>d2b59b1 a.139.1.1 (B:104-163) Cellulosomal scaffolding protein A {Clostridium thermocellum [TaxId: 1515]}

class: All alpha proteins
fold: Type I dockerin domain
superfamily: Type I dockerin domain
family: Type I dockerin domain
domain: Cellulosomal scaffolding protein A
species: Clostridium thermocellum [TaxId: 1515]

Probab=82.14  E-value=0.89  Score=28.14  Aligned_cols=50  Identities=24%  Similarity=0.403  Sum_probs=33.9

Q ss_pred             CC-CCHHHHHHHHHhcCCCCCcchHHHHHHHHcCCCCcceeHHHHHHHHhhccC
Q 009980          379 DN-ATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRK  431 (521)
Q Consensus       379 ~g-i~~~el~~~l~~~~~~~~~~~~~~~f~~~D~~~~g~I~~~ef~~~~~~~~~  431 (521)
                      || |+..+..++.+.+|.....+..   -..+|.|.||.|+..+...+.+.++.
T Consensus         3 D~~INm~DVmei~k~F~~~~g~~~y---~~~lDlN~dGaInm~Di~Iv~khF~~   53 (60)
T d2b59b1           3 DNSINLLDVAEVIRCFNATKGSANY---VEELDINRNGAINMQDIMIVHKHFGA   53 (60)
T ss_dssp             SSCCCHHHHHHHHHTTTCBTTSTTC---CGGGSTTCSSBCSHHHHHHHHTTTTC
T ss_pred             cccccHHHHHHHHHHhccccCCcch---hhhccccccccccHHHHHHHHHHhCC
Confidence            56 8888888888877665544332   23568888888888887766555443