Citrus Sinensis ID: 009980


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-
MGQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAKEEEMDAEIVSRLQSFNARRKLRAAAIASVLSSTIFLRRTKKLKNLLGSHDLNEEEIQNLRIHFRTICANGDNATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDSSLQDVVLSSLRQQ
cccccccccccEEEccccccccccEEEEEEEcccccccEEEEEEEEcccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcccccccEEEEEEEEECcccEEEEEEcccccHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccEEECccccEECccccccccccccccccccccccccccccHHHHHHHHHHHHHHHccccccccccHHHHHHHHHcccccccccccccccHHHHHHHHHHccccccccccHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHccccccccHHHHHHHHHHccccccHHHHHHHHHHHcccccccEEHHHHHHHHcccHHHccHHHHHHHHHHHcccccccccHHHHHHHHHcccccccccccccHHHHHHHHHHHcccccccccHHHHHHHHHcccccHHHHHHHHHcc
*****RK**DEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGF************GFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAKEEEMDAEIVSRLQSFNARRKLRAAAIASVLSSTIFLRRTKKLKNLLGSHDLNEEEIQNLRIHFRTICANGDNATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAA******************
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MGQETRKLTDEYEVTDILGRGGFSVVRRGIKKTCGETNQVAIKTLRRIGSTTPYGFPGSRGSSSSSQIGFFPTRKQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDQNGVHLILELCSGGELFDRIVAQERYMEVGAAAVIRQIAEGLAALHQANIVHRDLKPENCLFLNDREDSPLKIMDFGLSSVEGYTDPVVGLFGSIDYVSPEALLQDRITSKSDMWSLGVILYILLSGYPPFIAQSNRQKQQMIMAGEFSFYEQTWKNISSSAKQLISSLLTVDPNRRPSAQELLNHPWVIGDSAKEEEMDAEIVSRLQSFNARRKLRAAAIASVLSSTIFLRRTKKLKNLLGSHDLNEEEIQNLRIHFRTICANGDNATLSEFEEVLKAMNMSSLVPLAPRIFDLFDNNRDGTVDMREILCGFSSLRKSQGDDALRLCFQMYDIDRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDLMDANNDGKVTFDEFRAAMQRDSSLQDVVLSSLRQQ

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase Calcium- and calmodulin-dependent protein kinase required for mycorrhizal symbiosis.confidentQ6AVM3
Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase Protein kinase that may be involved in microsporogenesis.probableQ43531
Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase Calcium- and calmodulin-dependent protein kinase necessary and sufficient for dedifferentiation of root cortical cells into nodule initials. Not required for calcium spiking.probableA0AAR7

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
2.-.-.-Transferases.probable
2.7.-.-Transferring phosphorous-containing groups.probable
2.7.11.-Protein-serine/threonine kinases.probable
2.7.11.17Transferred entry: 2.7.11.17.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1NYA, chain A
Confidence level:very confident
Coverage over the Query: 360-506
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Template: 1NYA, chain A
Confidence level:very confident
Coverage over the Query: 400-520
View the alignment between query and template
View the model in PyMOL
Template: 3Q5I, chain A
Confidence level:very confident
Coverage over the Query: 4-47,79-338,356-506
View the alignment between query and template
View the model in PyMOL
Template: 3HZT, chain A
Confidence level:confident
Coverage over the Query: 9-52,77-376,395-466,493-505
View the alignment between query and template
View the model in PyMOL