Citrus Sinensis ID: 010004

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520
MEISEFAKNITQEHTQVVPISLFVAILCLCLIVGHLLEENRWVNESITAILIGCVSGIIILSITKWKSSHILRFDEELFFIYLLPPIIFNAGFQVKKKQFFHNFLTIMMFGVIGVFISVSIITVGSWWLFPKLGFMGLSIQDYLALGTIFSSTDTVCTLQILNQDETPLLYSLVFGEGVVNDATSVVLFNAVQKIDVRELNGKAALRIFRDFLYLFSTSTILGVTAGLLTALVLKTLYFGKHSSVREIALMVLMAYLSYILAELLELSGILTVFFCGIFMSHYAWHNMTDSSRITTRHTFAMMSFIAETFIFLYVGMDAFDIEKWRMSKLSFVTSLGVYSALILMILLGRAAFVFPLSLLSNYMNSHRSPSISFNHQVVIWWAGLMRGAVSIALAFKQFTYSGVTSDPDSATMITATIIIVLFTTLVFGFLTRPLVKYLLPHPQHATNNSCREPKSPNEDMNLPLLSFDESTATNLLRAKDSLSMLLDRPVYTIHSFWRRFDDTYMRPVFGGPDSNQSQC
ccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccEEHHHccccHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHcccccccHHHHHHHHHHcccccEEEEEEEccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEcccHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHccHHHHHHHHcccccccccccccccccccccccccccccccccHHHcccccccccccccccccHHHHHHHHHHHccccccccccccccccc
*********ITQEHTQVVPISLFVAILCLCLIVGHLLEENRWVNESITAILIGCVSGIIILSITKWKSSHILRFDEELFFIYLLPPIIFNAGFQVKKKQFFHNFLTIMMFGVIGVFISVSIITVGSWWLFPKLGFMGLSIQDYLALGTIFSSTDTVCTLQILNQDETPLLYSLVFGEGVVNDATSVVLFNAVQKIDVRELNGKAALRIFRDFLYLFSTSTILGVTAGLLTALVLKTLYFGKHSSVREIALMVLMAYLSYILAELLELSGILTVFFCGIFMSHYAWHNMTDSSRITTRHTFAMMSFIAETFIFLYVGMDAFDIEKWRMSKLSFVTSLGVYSALILMILLGRAAFVFPLSLLSNYMNSHRSPSISFNHQVVIWWAGLMRGAVSIALAFKQFTYSGVTSDPDSATMITATIIIVLFTTLVFGFLTRPLVKYLLP*********************************NLLRAKDSLSMLLDRPVYTIHSFWRRFDDTYMRPVF**********
xxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
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MEISEFAKNITQEHTQVVPISLFVAILCLCLIVGHLLEENRWVNESITAILIGCVSGIIILSITKWKSSHILRFDEELFFIYLLPPIIFNAGFQVKKKQFFHNFLTIMMFGVIGVFISVSIITVGSWWLFPKLGFMGLSIQDYLALGTIFSSTDTVCTLQILNQDETPLLYSLVFGEGVVNDATSVVLFNAVQKIDVRELNGKAALRIFRDFLYLFSTSTILGVTAGLLTALVLKTLYFGKHSSVREIALMVLMAYLSYILAELLELSGILTVFFCGIFMSHYAWHNMTDSSRITTRHTFAMMSFIAETFIFLYVGMDAFDIEKWRMSKLSFVTSLGVYSALILMILLGRAAFVFPLSLLSNYMNSHRSPSISFNHQVVIWWAGLMRGAVSIALAFKQFTYSGVTSDPDSATMITATIIIVLFTTLVFGFLTRPLVKYLLPHPQHATNNSCREPKSPNEDMNLPLLSFDESTATNLLRAKDSLSMLLDRPVYTIHSFWRRFDDTYMRPVFGGPDSNQSQC

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Sodium/hydrogen exchanger 4 May act in low affinity electroneutral exchange of protons for cations such as Na(+) or K(+) across membranes. May also exchange Li(+) and Cs(+) with a lower affinity.confidentQ8S397
Sodium/hydrogen exchanger 8 Involved in pH regulation to eliminate acids generated by active metabolism or to counter adverse environmental conditions. Major proton extruding system driven by the inward sodium ion chemical gradient. Plays an important role in signal transduction.probableQ9Y2E8

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1ZCD, chain A
Confidence level:confident
Coverage over the Query: 78-210,224-399
View the alignment between query and template
View the model in PyMOL